fairgraph 0.13.0__py3-none-any.whl

fairgraph/openminds/core/data/license.py

@@ -0,0 +1,77 @@
+"""
+Structured information on a used license.
+"""
+
+# this file was auto-generated
+
+from openminds.properties import Property
+from openminds.v4.core import License as OMLicense
+from fairgraph import KGObject
+
+
+from openminds import IRI
+
+
+class License(KGObject, OMLicense):
+    """
+    Structured information on a used license.
+    """
+
+    type_ = "https://openminds.om-i.org/types/License"
+    default_space = "controlled"
+    # forward properties are defined in the parent class (in openMINDS-Python)
+    reverse_properties = [
+        Property(
+            "is_applied_to",
+            [
+                "openminds.v4.computation.ValidationTestVersion",
+                "openminds.v4.computation.WorkflowRecipeVersion",
+                "openminds.v4.core.DatasetVersion",
+                "openminds.v4.core.MetaDataModelVersion",
+                "openminds.v4.core.ModelVersion",
+                "openminds.v4.core.SoftwareVersion",
+                "openminds.v4.publications.Book",
+                "openminds.v4.publications.Chapter",
+                "openminds.v4.publications.LearningResource",
+                "openminds.v4.publications.LivePaperVersion",
+                "openminds.v4.publications.ScholarlyArticle",
+                "openminds.v4.sands.BrainAtlasVersion",
+                "openminds.v4.sands.CommonCoordinateSpaceVersion",
+            ],
+            "license",
+            reverse="license",
+            multiple=True,
+            description="reverse of 'license'",
+        ),
+    ]
+    aliases = {"name": "full_name", "alias": "short_name"}
+    existence_query_properties = ("alias",)
+
+    def __init__(
+        self,
+        name=None,
+        alias=None,
+        full_name=None,
+        is_applied_to=None,
+        legal_code=None,
+        short_name=None,
+        webpages=None,
+        id=None,
+        data=None,
+        space=None,
+        release_status=None,
+    ):
+        return KGObject.__init__(
+            self,
+            id=id,
+            space=space,
+            release_status=release_status,
+            data=data,
+            name=name,
+            alias=alias,
+            full_name=full_name,
+            is_applied_to=is_applied_to,
+            legal_code=legal_code,
+            short_name=short_name,
+            webpages=webpages,
+        )

fairgraph/openminds/core/data/measurement.py

@@ -0,0 +1,45 @@
+"""
+Structured information about a measurement performed during a scientific experiment.
+"""
+
+# this file was auto-generated
+
+from openminds.properties import Property
+from openminds.v4.core import Measurement as OMMeasurement
+from fairgraph import EmbeddedMetadata
+
+
+from datetime import datetime
+
+
+class Measurement(EmbeddedMetadata, OMMeasurement):
+    """
+    Structured information about a measurement performed during a scientific experiment.
+    """
+
+    type_ = "https://openminds.om-i.org/types/Measurement"
+    # forward properties are defined in the parent class (in openMINDS-Python)
+    reverse_properties = []
+    existence_query_properties = ("measured_quantity", "values")
+
+    def __init__(
+        self,
+        additional_remarks=None,
+        measured_quantity=None,
+        measured_with=None,
+        timestamp=None,
+        values=None,
+        id=None,
+        data=None,
+        space=None,
+        release_status=None,
+    ):
+        return EmbeddedMetadata.__init__(
+            self,
+            data=data,
+            additional_remarks=additional_remarks,
+            measured_quantity=measured_quantity,
+            measured_with=measured_with,
+            timestamp=timestamp,
+            values=values,
+        )

fairgraph/openminds/core/data/service_link.py

@@ -0,0 +1,49 @@
+"""
+<description not available>
+"""
+
+# this file was auto-generated
+
+from openminds.properties import Property
+from openminds.v4.core import ServiceLink as OMServiceLink
+from fairgraph import KGObject
+
+
+from openminds import IRI
+
+
+class ServiceLink(KGObject, OMServiceLink):
+    """
+    <description not available>
+    """
+
+    type_ = "https://openminds.om-i.org/types/ServiceLink"
+    default_space = "dataset"
+    # forward properties are defined in the parent class (in openMINDS-Python)
+    reverse_properties = []
+    existence_query_properties = ("data_location", "open_data_in", "service")
+
+    def __init__(
+        self,
+        data_location=None,
+        display_label=None,
+        open_data_in=None,
+        preview_image=None,
+        service=None,
+        id=None,
+        data=None,
+        space=None,
+        release_status=None,
+    ):
+        return KGObject.__init__(
+            self,
+            id=id,
+            space=space,
+            release_status=release_status,
+            data=data,
+            data_location=data_location,
+            display_label=display_label,
+            open_data_in=open_data_in,
+            preview_image=preview_image,
+            service=service,
+        )

fairgraph/openminds/core/digital_identifier/__init__.py

@@ -0,0 +1,11 @@
+from .doi import DOI
+from .gridid import GRIDID
+from .handle import HANDLE
+from .identifiers_dot_org_id import IdentifiersDotOrgID
+from .isbn import ISBN
+from .issn import ISSN
+from .orcid import ORCID
+from .rorid import RORID
+from .rrid import RRID
+from .stock_number import StockNumber
+from .swhid import SWHID

fairgraph/openminds/core/digital_identifier/doi.py

@@ -0,0 +1,98 @@
+"""
+Structured information about a digital object identifier, as standardized by the International Organization for Standardization.
+"""
+
+# this file was auto-generated
+
+from openminds.properties import Property
+from openminds.v4.core import DOI as OMDOI
+from fairgraph import KGObject
+
+
+class DOI(KGObject, OMDOI):
+    """
+    Structured information about a digital object identifier, as standardized by the International Organization for Standardization.
+    """
+
+    type_ = "https://openminds.om-i.org/types/DOI"
+    default_space = "dataset"
+    # forward properties are defined in the parent class (in openMINDS-Python)
+    reverse_properties = [
+        Property(
+            "describes",
+            ["openminds.v4.core.BehavioralProtocol", "openminds.v4.core.Protocol"],
+            "describedIn",
+            reverse="described_in",
+            multiple=True,
+            description="reverse of 'described_in'",
+        ),
+        Property(
+            "identifies",
+            [
+                "openminds.v4.computation.ValidationTest",
+                "openminds.v4.computation.WorkflowRecipe",
+                "openminds.v4.core.Dataset",
+                "openminds.v4.core.MetaDataModel",
+                "openminds.v4.core.Model",
+                "openminds.v4.core.Software",
+                "openminds.v4.ephys.Electrode",
+                "openminds.v4.ephys.ElectrodeArray",
+                "openminds.v4.ephys.Pipette",
+                "openminds.v4.publications.Book",
+                "openminds.v4.publications.Chapter",
+                "openminds.v4.publications.LearningResource",
+                "openminds.v4.publications.LivePaper",
+                "openminds.v4.publications.ScholarlyArticle",
+                "openminds.v4.sands.BrainAtlas",
+                "openminds.v4.sands.CommonCoordinateSpace",
+                "openminds.v4.specimen_prep.SlicingDevice",
+            ],
+            "digitalIdentifier",
+            reverse="digital_identifier",
+            multiple=True,
+            description="reverse of 'digital_identifier'",
+        ),
+        Property(
+            "related_to",
+            [
+                "openminds.v4.computation.ValidationTestVersion",
+                "openminds.v4.computation.WorkflowRecipeVersion",
+                "openminds.v4.core.DatasetVersion",
+                "openminds.v4.core.MetaDataModelVersion",
+                "openminds.v4.core.ModelVersion",
+                "openminds.v4.core.SoftwareVersion",
+                "openminds.v4.core.WebServiceVersion",
+                "openminds.v4.publications.LivePaperVersion",
+                "openminds.v4.sands.BrainAtlasVersion",
+                "openminds.v4.sands.CommonCoordinateSpaceVersion",
+            ],
+            "relatedPublication",
+            reverse="related_publications",
+            multiple=True,
+            description="reverse of 'related_publications'",
+        ),
+    ]
+    existence_query_properties = ("identifier",)
+
+    def __init__(
+        self,
+        describes=None,
+        identifier=None,
+        identifies=None,
+        related_to=None,
+        id=None,
+        data=None,
+        space=None,
+        release_status=None,
+    ):
+        return KGObject.__init__(
+            self,
+            id=id,
+            space=space,
+            release_status=release_status,
+            data=data,
+            describes=describes,
+            identifier=identifier,
+            identifies=identifies,
+            related_to=related_to,
+        )

fairgraph/openminds/core/digital_identifier/gridid.py

@@ -0,0 +1,41 @@
+"""
+A GRID (Global Research Identifier Database) identifier.
+"""
+
+# this file was auto-generated
+
+from openminds.properties import Property
+from openminds.v4.core import GRIDID as OMGRIDID
+from fairgraph import KGObject
+
+
+class GRIDID(KGObject, OMGRIDID):
+    """
+    A GRID (Global Research Identifier Database) identifier.
+    """
+
+    type_ = "https://openminds.om-i.org/types/GRIDID"
+    default_space = "common"
+    # forward properties are defined in the parent class (in openMINDS-Python)
+    reverse_properties = [
+        Property(
+            "identifies",
+            "openminds.v4.core.Organization",
+            "digitalIdentifier",
+            reverse="digital_identifiers",
+            multiple=True,
+            description="reverse of 'digital_identifiers'",
+        ),
+    ]
+    existence_query_properties = ("identifier",)
+
+    def __init__(self, identifier=None, identifies=None, id=None, data=None, space=None, release_status=None):
+        return KGObject.__init__(
+            self,
+            id=id,
+            space=space,
+            release_status=release_status,
+            data=data,
+            identifier=identifier,
+            identifies=identifies,
+        )

fairgraph/openminds/core/digital_identifier/handle.py

@@ -0,0 +1,52 @@
+"""
+A persistent identifier for an information resource provided by the Handle System of the Corporation for National Research Initiatives.
+"""
+
+# this file was auto-generated
+
+from openminds.properties import Property
+from openminds.v4.core import HANDLE as OMHANDLE
+from fairgraph import KGObject
+
+
+class HANDLE(KGObject, OMHANDLE):
+    """
+    A persistent identifier for an information resource provided by the Handle System of the Corporation for National Research Initiatives.
+    """
+
+    type_ = "https://openminds.om-i.org/types/HANDLE"
+    default_space = "common"
+    # forward properties are defined in the parent class (in openMINDS-Python)
+    reverse_properties = [
+        Property(
+            "related_to",
+            [
+                "openminds.v4.computation.ValidationTestVersion",
+                "openminds.v4.computation.WorkflowRecipeVersion",
+                "openminds.v4.core.DatasetVersion",
+                "openminds.v4.core.MetaDataModelVersion",
+                "openminds.v4.core.ModelVersion",
+                "openminds.v4.core.SoftwareVersion",
+                "openminds.v4.core.WebServiceVersion",
+                "openminds.v4.publications.LivePaperVersion",
+                "openminds.v4.sands.BrainAtlasVersion",
+                "openminds.v4.sands.CommonCoordinateSpaceVersion",
+            ],
+            "relatedPublication",
+            reverse="related_publications",
+            multiple=True,
+            description="reverse of 'related_publications'",
+        ),
+    ]
+    existence_query_properties = ("identifier",)
+
+    def __init__(self, identifier=None, related_to=None, id=None, data=None, space=None, release_status=None):
+        return KGObject.__init__(
+            self,
+            id=id,
+            space=space,
+            release_status=release_status,
+            data=data,
+            identifier=identifier,
+            related_to=related_to,
+        )

fairgraph/openminds/core/digital_identifier/identifiers_dot_org_id.py

@@ -0,0 +1,41 @@
+"""
+<description not available>
+"""
+
+# this file was auto-generated
+
+from openminds.properties import Property
+from openminds.v4.core import IdentifiersDotOrgID as OMIdentifiersDotOrgID
+from fairgraph import KGObject
+
+
+class IdentifiersDotOrgID(KGObject, OMIdentifiersDotOrgID):
+    """
+    <description not available>
+    """
+
+    type_ = "https://openminds.om-i.org/types/IdentifiersDotOrgID"
+    default_space = "common"
+    # forward properties are defined in the parent class (in openMINDS-Python)
+    reverse_properties = [
+        Property(
+            "identifies",
+            ["openminds.v4.core.Dataset", "openminds.v4.core.DatasetVersion"],
+            "digitalIdentifier",
+            reverse="digital_identifier",
+            multiple=True,
+            description="reverse of 'digital_identifier'",
+        ),
+    ]
+    existence_query_properties = ("identifier",)
+
+    def __init__(self, identifier=None, identifies=None, id=None, data=None, space=None, release_status=None):
+        return KGObject.__init__(
+            self,
+            id=id,
+            space=space,
+            release_status=release_status,
+            data=data,
+            identifier=identifier,
+            identifies=identifies,
+        )

fairgraph/openminds/core/digital_identifier/isbn.py

@@ -0,0 +1,88 @@
+"""
+An International Standard Book Number of the International ISBN Agency.
+"""
+
+# this file was auto-generated
+
+from openminds.properties import Property
+from openminds.v4.core import ISBN as OMISBN
+from fairgraph import KGObject
+
+
+class ISBN(KGObject, OMISBN):
+    """
+    An International Standard Book Number of the International ISBN Agency.
+    """
+
+    type_ = "https://openminds.om-i.org/types/ISBN"
+    default_space = "dataset"
+    # forward properties are defined in the parent class (in openMINDS-Python)
+    reverse_properties = [
+        Property(
+            "cited_in",
+            [
+                "openminds.v4.publications.Chapter",
+                "openminds.v4.publications.LearningResource",
+                "openminds.v4.publications.ScholarlyArticle",
+            ],
+            "citedPublication",
+            reverse="cited_publications",
+            multiple=True,
+            description="reverse of 'cited_publications'",
+        ),
+        Property(
+            "identifies",
+            [
+                "openminds.v4.publications.Book",
+                "openminds.v4.sands.BrainAtlas",
+                "openminds.v4.sands.CommonCoordinateSpace",
+            ],
+            "digitalIdentifier",
+            reverse="digital_identifier",
+            multiple=True,
+            description="reverse of 'digital_identifier'",
+        ),
+        Property(
+            "related_to",
+            [
+                "openminds.v4.computation.ValidationTestVersion",
+                "openminds.v4.computation.WorkflowRecipeVersion",
+                "openminds.v4.core.DatasetVersion",
+                "openminds.v4.core.MetaDataModelVersion",
+                "openminds.v4.core.ModelVersion",
+                "openminds.v4.core.SoftwareVersion",
+                "openminds.v4.core.WebServiceVersion",
+                "openminds.v4.publications.LivePaperVersion",
+                "openminds.v4.sands.BrainAtlasVersion",
+                "openminds.v4.sands.CommonCoordinateSpaceVersion",
+            ],
+            "relatedPublication",
+            reverse="related_publications",
+            multiple=True,
+            description="reverse of 'related_publications'",
+        ),
+    ]
+    existence_query_properties = ("identifier",)
+
+    def __init__(
+        self,
+        cited_in=None,
+        identifier=None,
+        identifies=None,
+        related_to=None,
+        id=None,
+        data=None,
+        space=None,
+        release_status=None,
+    ):
+        return KGObject.__init__(
+            self,
+            id=id,
+            space=space,
+            release_status=release_status,
+            data=data,
+            cited_in=cited_in,
+            identifier=identifier,
+            identifies=identifies,
+            related_to=related_to,
+        )

fairgraph/openminds/core/digital_identifier/issn.py

@@ -0,0 +1,63 @@
+"""
+An International Standard Serial Number of the ISSN International Centre.
+"""
+
+# this file was auto-generated
+
+from openminds.properties import Property
+from openminds.v4.core import ISSN as OMISSN
+from fairgraph import KGObject
+
+
+class ISSN(KGObject, OMISSN):
+    """
+    An International Standard Serial Number of the ISSN International Centre.
+    """
+
+    type_ = "https://openminds.om-i.org/types/ISSN"
+    default_space = "dataset"
+    # forward properties are defined in the parent class (in openMINDS-Python)
+    reverse_properties = [
+        Property(
+            "identifies",
+            "openminds.v4.publications.Periodical",
+            "digitalIdentifier",
+            reverse="digital_identifier",
+            multiple=True,
+            description="reverse of 'digital_identifier'",
+        ),
+        Property(
+            "related_to",
+            [
+                "openminds.v4.computation.ValidationTestVersion",
+                "openminds.v4.computation.WorkflowRecipeVersion",
+                "openminds.v4.core.DatasetVersion",
+                "openminds.v4.core.MetaDataModelVersion",
+                "openminds.v4.core.ModelVersion",
+                "openminds.v4.core.SoftwareVersion",
+                "openminds.v4.core.WebServiceVersion",
+                "openminds.v4.publications.LivePaperVersion",
+                "openminds.v4.sands.BrainAtlasVersion",
+                "openminds.v4.sands.CommonCoordinateSpaceVersion",
+            ],
+            "relatedPublication",
+            reverse="related_publications",
+            multiple=True,
+            description="reverse of 'related_publications'",
+        ),
+    ]
+    existence_query_properties = ("identifier",)
+
+    def __init__(
+        self, identifier=None, identifies=None, related_to=None, id=None, data=None, space=None, release_status=None
+    ):
+        return KGObject.__init__(
+            self,
+            id=id,
+            space=space,
+            release_status=release_status,
+            data=data,
+            identifier=identifier,
+            identifies=identifies,
+            related_to=related_to,
+        )

fairgraph/openminds/core/digital_identifier/orcid.py

@@ -0,0 +1,41 @@
+"""
+A persistent identifier for a researcher provided by Open Researcher and Contributor ID, Inc.
+"""
+
+# this file was auto-generated
+
+from openminds.properties import Property
+from openminds.v4.core import ORCID as OMORCID
+from fairgraph import KGObject
+
+
+class ORCID(KGObject, OMORCID):
+    """
+    A persistent identifier for a researcher provided by Open Researcher and Contributor ID, Inc.
+    """
+
+    type_ = "https://openminds.om-i.org/types/ORCID"
+    default_space = "common"
+    # forward properties are defined in the parent class (in openMINDS-Python)
+    reverse_properties = [
+        Property(
+            "identifies",
+            "openminds.v4.core.Person",
+            "digitalIdentifier",
+            reverse="digital_identifiers",
+            multiple=True,
+            description="reverse of 'digital_identifiers'",
+        ),
+    ]
+    existence_query_properties = ("identifier",)
+
+    def __init__(self, identifier=None, identifies=None, id=None, data=None, space=None, release_status=None):
+        return KGObject.__init__(
+            self,
+            id=id,
+            space=space,
+            release_status=release_status,
+            data=data,
+            identifier=identifier,
+            identifies=identifies,
+        )

fairgraph/openminds/core/digital_identifier/rorid.py

@@ -0,0 +1,41 @@
+"""
+A persistent identifier for a research organization, provided by the Research Organization Registry.
+"""
+
+# this file was auto-generated
+
+from openminds.properties import Property
+from openminds.v4.core import RORID as OMRORID
+from fairgraph import KGObject
+
+
+class RORID(KGObject, OMRORID):
+    """
+    A persistent identifier for a research organization, provided by the Research Organization Registry.
+    """
+
+    type_ = "https://openminds.om-i.org/types/RORID"
+    default_space = "common"
+    # forward properties are defined in the parent class (in openMINDS-Python)
+    reverse_properties = [
+        Property(
+            "identifies",
+            "openminds.v4.core.Organization",
+            "digitalIdentifier",
+            reverse="digital_identifiers",
+            multiple=True,
+            description="reverse of 'digital_identifiers'",
+        ),
+    ]
+    existence_query_properties = ("identifier",)
+
+    def __init__(self, identifier=None, identifies=None, id=None, data=None, space=None, release_status=None):
+        return KGObject.__init__(
+            self,
+            id=id,
+            space=space,
+            release_status=release_status,
+            data=data,
+            identifier=identifier,
+            identifies=identifies,
+        )