eegdash 0.3.6.dev182011805__py3-none-any.whl → 0.3.7__py3-none-any.whl

eegdash/dataset_summary.csv

@@ -1,256 +0,0 @@
-dataset,n_records,n_subjects,n_tasks,nchans_set,sampling_freqs,duration_hours_total,size,size_bytes,s3_item_count
-ds002718,18,18,1,74,250,14.844,4.31 GB,4624315408,0
-ds005505,1342,136,10,129,500,125.366,103.11 GB,110708824369,0
-ds004745,6,6,1,,1000,0.0,242.08 MB,253839725,0
-ds005514,2885,295,10,129,500,213.008,185.03 GB,198677728665,0
-ds005512,2320,257,10,129,500,196.205,157.19 GB,168778507427,0
-ds005510,1227,135,10,129,500,112.464,90.80 GB,97492961757,0
-ds005511,3100,381,10,"6,129",500,285.629,244.83 GB,262883881898,0
-ds005509,3326,330,10,129,500,274.559,224.17 GB,240701124393,0
-ds005508,3342,324,10,129,500,269.281,229.81 GB,246753736933,0
-ds005507,1812,184,10,129,500,168.649,139.37 GB,149646718160,0
-ds005506,1405,150,10,129,500,127.896,111.88 GB,120126449650,0
-test,2,1,1,64,500,20.556,0 B,0,0
-ds004854,1,1,1,64,128,0.535,79.21 MB,83057080,0
-ds004853,1,1,1,64,128,0.535,79.21 MB,83057080,0
-ds004844,68,17,1,64,1024,21.252,22.33 GB,23976121966,0
-ds004843,92,14,1,64,256,29.834,7.66 GB,8229205795,0
-ds004842,102,14,1,64,256,20.102,5.21 GB,5589054270,0
-ds004852,1,1,1,64,128,0.535,79.21 MB,83057106,0
-ds004851,1,1,1,64,128,0.535,56.59 GB,60765064414,0
-ds004850,1,1,1,64,128,0.535,79.21 MB,83057078,0
-ds004855,1,1,1,64,128,0.535,79.21 MB,83057076,0
-ds004849,1,1,1,64,128,0.535,79.21 MB,83057084,0
-ds004841,147,20,1,64,256,29.054,7.31 GB,7846934401,0
-ds004661,17,17,1,64,128,10.137,1.40 GB,1505577392,0
-ds004660,42,21,1,32,"2048,512",23.962,7.25 GB,7782408710,0
-ds004657,119,24,1,64,"1024,8192",27.205,43.06 GB,46237302701,0
-ds004362,1526,109,1,64,"128,160",48.592,11.14 GB,11961862159,0
-ds004010,24,24,1,64,1000,26.457,23.14 GB,24844863976,0
-ds002181,226,226,1,125,500,7.676,150.89 MB,158222084,0
-ds004554,16,16,1,99,1000,0.024,8.79 GB,9432865762,0
-ds005697,50,50,1,"65,69",1000,77.689,66.58 GB,71486411402,0
-ds004350,240,24,5,64,256,41.265,26.83 GB,28810754598,0
-ds004785,17,17,1,32,500,0.019,351.17 MB,368224136,0
-ds004504,88,88,1,19,500,19.608,5.38 GB,5780997160,0
-ds004635,55,55,1,129,1000,20.068,30.56 GB,32817659781,0
-ds005787,448,19,1,"64,66","1000,500",23.733,27.09 GB,29087512003,0
-ds005079,60,1,15,65,500,3.25,1.68 GB,1809231997,0
-ds005342,32,32,1,17,250,33.017,2.03 GB,2181610593,0
-ds005034,100,25,2,129,1000,37.525,61.36 GB,65885315479,0
-ds002680,350,14,1,31,1000,21.244,9.22 GB,9902152149,0
-ds003805,1,1,1,19,500,0.033,16.96 MB,17781347,0
-ds003838,130,65,2,63,1000,136.757,253.29 GB,271965704312,0
-ds002691,20,20,1,32,250,6.721,776.76 MB,814491068,0
-ds003690,375,75,3,"64,66",500,46.771,21.46 GB,23043491552,0
-ds004040,4,2,1,64,512,4.229,11.59 GB,12440304224,0
-ds003061,39,13,1,79,256,8.196,2.26 GB,2421951821,0
-ds005672,3,3,1,"65,69",1000,4.585,4.23 GB,4545641306,0
-ds005410,81,81,1,63,1000,22.976,19.76 GB,21213481224,0
-ds003753,25,25,1,64,500,10.104,4.62 GB,4965253148,0
-ds005565,24,24,1,,500,11.436,2.62 GB,2816607296,0
-ds002893,52,49,1,33,"250,250.0293378038558",36.114,7.70 GB,8263047991,0
-ds002578,2,2,1,256,256,1.455,1.33 GB,1429254677,0
-ds005089,36,36,1,63,1000,68.82,68.01 GB,73021312961,0
-ds003822,25,25,1,64,500,12.877,5.82 GB,6248744522,0
-ds003670,62,25,1,32,2000,72.772,97.53 GB,104721234854,0
-ds005048,35,35,1,,250,5.203,355.91 MB,373200880,0
-ds004574,146,146,1,"63,64,66",500,31.043,13.48 GB,14470034208,0
-ds004519,40,40,1,62,250,0.067,12.56 GB,13486848019,0
-ds004602,546,182,3,128,"250,500",87.11,73.91 GB,79364456958,0
-ds004784,6,1,6,128,512,0.518,10.82 GB,11621460277,0
-ds004771,61,61,1,34,256,0.022,1.36 GB,1462195517,0
-ds003518,137,110,1,64,500,89.888,39.51 GB,42423490194,0
-ds005207,39,20,1,"6,10,12,14,15,16,17,18","128,250",422.881,69.12 GB,74214619739,0
-ds005866,60,60,1,,500,15.976,3.57 GB,3837211623,0
-ds003523,221,91,1,64,500,84.586,37.54 GB,40304852370,0
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-ds004588,42,42,1,24,300,4.957,601.76 MB,630994652,0
-ds005811,448,19,1,62,"1000,500",23.733,24.12 GB,25902600444,0
-ds003987,69,23,1,64,500.0930232558139,52.076,26.41 GB,28362707915,0
-ds004317,50,50,1,60,500,37.767,18.29 GB,19639199743,0
-ds004033,36,18,2,64,500,42.645,19.81 GB,21270391452,0
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-ds003474,122,122,1,64,500,36.61,16.64 GB,17867805967,0
-ds003509,84,56,1,64,500,48.535,22.34 GB,23988721823,0
-ds005868,48,48,1,,500,13.094,2.93 GB,3146417813,0
-ds003516,25,25,1,47,500,22.57,13.46 GB,14451393616,0
-ds004942,62,62,1,65,1000,28.282,25.05 GB,26899933549,0
-ds004348,18,9,2,34,200,35.056,12.30 GB,13210476025,0
-ds004625,543,32,9,120,500,28.397,62.46 GB,67069111978,0
-ds003517,34,17,1,64,500,13.273,6.48 GB,6952992399,0
-ds004368,40,39,1,63,128,0.033,997.14 MB,1045574811,0
-ds004584,149,149,1,"63,64,66",500,6.641,2.87 GB,3078216874,0
-ds003506,84,56,1,64,500,35.381,16.21 GB,17400039992,0
-ds003570,40,40,1,64,2048,26.208,36.12 GB,38783075272,0
-ds003490,75,50,1,64,500,12.76,5.85 GB,6276775630,0
-ds004117,85,23,1,69,"1000,250,500,500.059",15.941,5.80 GB,6230776574,0
-ds004505,25,25,1,120,250,30.398,522.56 GB,561092363916,0
-ds004580,147,147,1,"63,64,66",500,36.514,15.84 GB,17008438640,0
-ds004532,137,110,1,64,500,49.651,22.09 GB,23719572304,0
-ds004902,218,71,2,61,"500,5000",18.118,8.29 GB,8898600609,0
-ds004295,26,26,1,66,"1024,512",34.313,31.51 GB,33831372141,0
-ds003519,54,27,1,64,500,20.504,8.96 GB,9623156762,0
-ds003458,23,23,1,64,500,10.447,4.72 GB,5065250805,0
-ds003004,34,34,1,"134,180,189,196,201,206,207,208,209,211,212,213,214,215,218,219,220,221,222,223,224,226,227,229,231,232,235",256,49.072,35.63 GB,38255333087,0
-ds004200,20,20,1,37,1000,14.123,7.21 GB,7740555648,0
-ds004015,36,36,1,18,500,47.29,6.03 GB,6475870225,0
-ds004595,53,53,1,64,500,17.078,7.89 GB,8470863296,0
-ds004626,52,52,1,68,1000,21.359,19.87 GB,21336341431,0
-ds004475,30,30,1,"113,115,118,119,120,122,123,124,125,126,127,128",512,26.899,112.74 GB,121053900746,0
-ds004515,54,54,1,64,500,20.61,9.48 GB,10177384081,0
-ds004883,516,172,3,128,500,137.855,122.80 GB,131858855599,0
-ds003739,120,30,4,128,256,20.574,10.94 GB,11742611182,0
-ds004389,260,26,4,42,10000,30.932,376.50 GB,404264486093,0
-ds004367,40,40,1,68,1200,24.81,27.98 GB,30039343808,0
-ds004369,41,41,1,4,500,37.333,8.01 GB,8596739356,0
-ds004579,139,139,1,"63,64,66",500,55.703,24.12 GB,25896737812,0
-ds005416,23,23,1,64,1000,24.68,21.30 GB,22869325264,0
-ds001785,54,18,3,63,"1000,1024",14.644,27.86 GB,29915397068,0
-ds001971,273,20,1,108,512,46.183,31.98 GB,34339201543,0
-ds004388,399,40,3,67,10000,43.327,682.54 GB,732876226489,0
-ds003478,243,122,1,64,500,23.57,10.65 GB,11430531312,0
-ds004306,15,12,1,124,1024,18.183,79.11 GB,84945921180,0
-ds005305,165,165,1,64,"2048,512",14.136,6.41 GB,6887595053,0
-ds005114,223,91,1,64,500,125.701,56.47 GB,60630838923,0
-ds003039,16,16,1,64,500,14.82,7.82 GB,8401240820,0
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-ds003655,156,156,1,19,500,130.923,20.26 GB,21756905870,0
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-ds004561,23,23,1,62,10000,11.379,97.96 GB,105188606283,0
-ds005131,63,58,2,64,500,52.035,22.35 GB,23996524256,0
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-ds005170,225,5,1,,,0.0,261.77 GB,281068716313,0
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eegdash/preprocessing.py

@@ -1,63 +0,0 @@
-import logging
-
-import mne
-import numpy as np
-
-from braindecode.preprocessing import Preprocessor
-
-logger = logging.getLogger("eegdash")
-
-
-class hbn_ec_ec_reannotation(Preprocessor):
-    """Preprocessor to reannotate the raw data for eyes open and eyes closed events.
-
-    This processor is designed for HBN datasets.
-
-    """
-
-    def __init__(self):
-        super().__init__(fn=self.transform, apply_on_array=False)
-
-    def transform(self, raw):
-        """Reannotate the raw data to create new events for eyes open and eyes closed
-
-        This function modifies the raw MNE object by creating new events based on
-        the existing annotations for "instructed_toCloseEyes" and "instructed_toOpenEyes".
-        It generates new events every 2 seconds within specified time ranges after
-        the original events, and replaces the existing annotations with these new events.
-
-        Parameters
-        ----------
-        raw : mne.io.Raw
-            The raw MNE object containing EEG data and annotations.
-
-        """
-        events, event_id = mne.events_from_annotations(raw)
-
-        logger.info("Original events found with ids: %s", event_id)
-
-        # Create new events array for 2-second segments
-        new_events = []
-        sfreq = raw.info["sfreq"]
-        for event in events[events[:, 2] == event_id["instructed_toCloseEyes"]]:
-            # For each original event, create events every 2 seconds from 15s to 29s after
-            start_times = event[0] + np.arange(15, 29, 2) * sfreq
-            new_events.extend([[int(t), 0, 1] for t in start_times])
-
-        for event in events[events[:, 2] == event_id["instructed_toOpenEyes"]]:
-            # For each original event, create events every 2 seconds from 5s to 19s after
-            start_times = event[0] + np.arange(5, 19, 2) * sfreq
-            new_events.extend([[int(t), 0, 2] for t in start_times])
-
-        # replace events in raw
-        new_events = np.array(new_events)
-
-        annot_from_events = mne.annotations_from_events(
-            events=new_events,
-            event_desc={1: "eyes_closed", 2: "eyes_open"},
-            sfreq=raw.info["sfreq"],
-        )
-
-        raw.set_annotations(annot_from_events)
-
-        return raw