dslighting 1.7.1__py3-none-any.whl → 1.7.6__py3-none-any.whl

mlebench/competitions/demand_forecasting_kernels_only/prepare.py

@@ -0,0 +1,27 @@
+from pathlib import Path
+import pandas as pd
+
+
+def prepare(raw: Path, public: Path, private: Path):
+    """
+    Prepare demand-forecasting-kernels-only dataset.
+    """
+    # Read data
+    train = pd.read_csv(raw / "train.csv")
+    test = pd.read_csv(raw / "test.csv")
+    sample_submission = pd.read_csv(raw / "sample_submission.csv")
+    test_answer = pd.read_csv(raw / "test_answer.csv")
+
+    # Public files (visible to agents)
+    train.to_csv(public / "train.csv", index=False)
+    test.to_csv(public / "test.csv", index=False)
+    sample_submission.to_csv(public / "sample_submission.csv", index=False)
+
+    # Private files (for grading)
+    test_answer.to_csv(private / "test.csv", index=False)
+
+    # Validation checks
+    assert len(test_answer) == len(sample_submission), \
+        f"Test answer ({len(test_answer)}) and sample submission ({len(sample_submission)}) must have same length"
+    assert "id" in test_answer.columns, "Test answer must have 'id' column"
+    assert "sales" in test_answer.columns, "Test answer must have 'sales' column"

mlebench/competitions/denoising-dirty-documents/grade.py

@@ -0,0 +1,44 @@
+from pandas import DataFrame
+from sklearn.metrics import root_mean_squared_error
+
+from mlebench.grade_helpers import InvalidSubmissionError
+
+
+def grade(submission: DataFrame, answers: DataFrame) -> float:
+    assert "id" in answers.columns, "Answers must have an 'id' column."
+    assert "value" in answers.columns, "Answers must have a 'value' column."
+
+    try:
+        answers["value"].astype(float)
+    except ValueError as e:
+        assert False, "Answers must have float values in the 'value' column."
+
+    if "id" not in submission.columns:
+        raise InvalidSubmissionError("Submission must have an 'id' column.")
+
+    if "value" not in submission.columns:
+        raise InvalidSubmissionError("Submission must have a 'value' column.")
+
+    try:
+        submission["value"].astype(float)
+    except ValueError as e:
+        raise InvalidSubmissionError(f"Submission must have float values in the 'value' column.")
+
+    if len(submission) != len(answers):
+        raise InvalidSubmissionError(
+            f"Expected the submission to have {len(answers)} rows, but got {len(submission)}."
+        )
+
+    submission_sorted = submission.sort_values(by="id").sort_index(axis=1)
+    answers_sorted = answers.sort_values(by="id").sort_index(axis=1)
+
+    if (submission_sorted["id"].values != answers_sorted["id"].values).any():
+        raise InvalidSubmissionError(
+            "Expected the submission to have the same 'id' values as the answers, but they differ."
+        )
+
+    y_true = submission_sorted["value"]
+    y_pred = answers_sorted["value"]
+    score = root_mean_squared_error(y_true=y_true, y_pred=y_pred)
+
+    return score

mlebench/competitions/denoising-dirty-documents/prepare.py

@@ -0,0 +1,134 @@
+import shutil
+from pathlib import Path
+
+import numpy as np
+import pandas as pd
+from pandas import DataFrame, read_csv
+from PIL import Image
+from sklearn.model_selection import train_test_split
+
+from mlebench.utils import extract
+
+
+def prepare(raw: Path, public: Path, private: Path) -> None:
+    # Create new train and test splits
+    extract(raw / "train.zip", public)
+
+    # Original test ratio has Train set - 144 samples; Test set - 72 samples (33% ratio)
+    # We set new test ratio to 0.2 to keep it number of train samples at same OOM while having enough samples for new test
+    old_train_img_fpaths = sorted((public / "train").glob("*.png"))
+    new_train_img_fpaths, new_test_img_fpaths = train_test_split(
+        old_train_img_fpaths,
+        test_size=0.2,
+        random_state=0,
+    )
+
+    new_test_imgs = set([fpath.name for fpath in new_test_img_fpaths])
+
+    # Create `test` directory
+    (public / "test").mkdir(exist_ok=True, parents=True)
+
+    for fpath in (public / "train").glob("*.png"):
+        if fpath.name in new_test_imgs:
+            shutil.move(fpath, public / "test" / fpath.name)
+
+    # Create public `train_cleaned` directories
+    extract(raw / "train_cleaned.zip", public)
+
+    (private / "train_cleaned").mkdir(exist_ok=True, parents=True)
+
+    for fpath in (public / "train_cleaned").glob("*.png"):
+        if fpath.name in new_test_imgs:
+            shutil.move(fpath, private / "train_cleaned" / fpath.name)
+
+    # Write `answers.csv`
+    dfs = []
+
+    for fpath in sorted((private / "train_cleaned").glob("*.png")):
+        df = to_df(fpath)
+        dfs.append(df)
+
+    answers = DataFrame(pd.concat(dfs))
+    answers.to_csv(private / "answers.csv", index=False)
+
+    shutil.rmtree(private / "train_cleaned")
+
+    # Write `sampleSubmission.csv`
+    sample_submission = answers.copy()
+    sample_submission["value"] = 1
+    sample_submission.to_csv(public / "sampleSubmission.csv", index=False)
+
+    # Sanity checks
+    assert len(list((public / "train").glob("*.png"))) == len(old_train_img_fpaths) - len(
+        new_test_img_fpaths
+    ), (
+        f"Expected the number of images in `train` to be "
+        f"{len(old_train_img_fpaths) - len(new_test_img_fpaths)}, but got "
+        f"{len(list((public / 'train').glob('*.png')))}."
+    )
+
+    assert len(list((public / "test").glob("*.png"))) == len(new_test_img_fpaths), (
+        f"Expected {len(new_test_img_fpaths)} in the `test` directory, but got "
+        f"{len(list((public / 'test').glob('*.png')))}."
+    )
+
+    assert read_csv(private / "answers.csv").drop_duplicates().shape[0] == len(
+        read_csv(private / "answers.csv")
+    ), (
+        f"Expected `answers.csv` to have unique rows, but got "
+        f"{read_csv(private / 'answers.csv').drop_duplicates().shape[0]} unique rows and "
+        f"{len(read_csv(private / 'answers.csv'))} rows in total."
+    )
+
+    assert len(read_csv(private / "answers.csv")) == len(
+        read_csv(public / "sampleSubmission.csv")
+    ), (
+        f"Expected `answers.csv` and `sampleSubmission.csv` to have the same number of rows, but "
+        f"got {len(read_csv(private / 'answers.csv'))} rows in `answers.csv` and "
+        f"{len(read_csv(public / 'sampleSubmission.csv'))} rows in `sampleSubmission.csv`."
+    )
+
+    assert "id" in read_csv(private / "answers.csv").columns, (
+        f"Expected `answers.csv` to have an 'id' column, but got "
+        f"{read_csv(private / 'answers.csv').columns}."
+    )
+
+    assert "value" in read_csv(private / "answers.csv").columns, (
+        f"Expected `answers.csv` to have a 'value' column, but got "
+        f"{read_csv(private / 'answers.csv').columns}."
+    )
+
+    assert "id" in read_csv(public / "sampleSubmission.csv").columns, (
+        f"Expected `sampleSubmission.csv` to have an 'id' column, but got "
+        f"{read_csv(public / 'sampleSubmission.csv').columns}."
+    )
+
+    assert "value" in read_csv(public / "sampleSubmission.csv").columns, (
+        f"Expected `sampleSubmission.csv` to have a 'value' column, but got "
+        f"{read_csv(public / 'sampleSubmission.csv').columns}."
+    )
+
+
+def to_df(img: Path) -> DataFrame:
+    """Converts an image to a DataFrame, where each row corresponds to a pixel."""
+
+    image = Image.open(img).convert("L")
+    image_array = np.array(image) / 255.0
+
+    rows, cols = image_array.shape
+    data = {"id": [], "value": []}
+
+    for row in range(rows):
+        for col in range(cols):
+            pixel_id = f"{img.stem}_{row+1}_{col+1}"
+            pixel_value = image_array[row, col]
+            data["id"].append(pixel_id)
+            data["value"].append(pixel_value)
+
+    df = DataFrame(data)
+
+    assert (
+        len(df) == rows * cols
+    ), f"Expected the DataFrame to have {rows * cols} rows, but got {len(df)} rows."
+
+    return DataFrame(data)

mlebench/competitions/denoising-dirty-documents/prepare_val.py

@@ -0,0 +1,178 @@
+import shutil
+from pathlib import Path
+
+import numpy as np
+import pandas as pd
+from pandas import DataFrame, read_csv
+from PIL import Image
+from sklearn.model_selection import train_test_split
+
+from mlebench.utils import extract
+
+
+def _generate_split_artifacts(
+    train_fpaths: list[Path],
+    test_fpaths: list[Path],
+    source_data_dir: Path,
+    public_dest: Path,
+    private_dest: Path,
+) -> None:
+    """
+    Helper function to generate all required files for a given train/test split.
+
+    This function copies the necessary image files, creates the ground-truth
+    `answers.csv` for the test set, and a `sampleSubmission.csv` for the public.
+    """
+    public_dest.mkdir(exist_ok=True, parents=True)
+    private_dest.mkdir(exist_ok=True, parents=True)
+
+    test_img_names = {fpath.name for fpath in test_fpaths}
+
+    # Create public train/test directories and copy images
+    (public_dest / "train").mkdir(exist_ok=True)
+    (public_dest / "test").mkdir(exist_ok=True)
+
+    for fpath in train_fpaths:
+        shutil.copy(fpath, public_dest / "train" / fpath.name)
+
+    for fpath in test_fpaths:
+        shutil.copy(fpath, public_dest / "test" / fpath.name)
+
+    # Prepare ground-truth labels for the test set
+    temp_private_cleaned_dir = private_dest / "train_cleaned"
+    temp_private_cleaned_dir.mkdir(exist_ok=True)
+
+    source_cleaned_dir = source_data_dir / "train_cleaned"
+    for fpath in source_cleaned_dir.glob("*.png"):
+        if fpath.name in test_img_names:
+            shutil.copy(fpath, temp_private_cleaned_dir / fpath.name)
+
+    # Write `answers.csv` for the test set
+    dfs = []
+    for fpath in sorted(temp_private_cleaned_dir.glob("*.png")):
+        df = to_df(fpath)
+        dfs.append(df)
+
+    answers = DataFrame(pd.concat(dfs))
+    answers.to_csv(private_dest / "answers.csv", index=False)
+
+    shutil.rmtree(temp_private_cleaned_dir)
+
+    # Write `sampleSubmission.csv`
+    sample_submission = answers.copy()
+    sample_submission["value"] = 1
+    sample_submission.to_csv(public_dest / "sampleSubmission.csv", index=False)
+
+    # Sanity checks
+    assert len(list((public_dest / "train").glob("*.png"))) == len(train_fpaths), (
+        f"Expected the number of images in `{public_dest}/train` to be "
+        f"{len(train_fpaths)}, but got "
+        f"{len(list((public_dest / 'train').glob('*.png')))}."
+    )
+
+    assert len(list((public_dest / "test").glob("*.png"))) == len(test_fpaths), (
+        f"Expected {len(test_fpaths)} in the `{public_dest}/test` directory, but got "
+        f"{len(list((public_dest / 'test').glob('*.png')))}."
+    )
+
+    assert read_csv(private_dest / "answers.csv").drop_duplicates().shape[0] == len(
+        read_csv(private_dest / "answers.csv")
+    ), (
+        f"Expected `{private_dest}/answers.csv` to have unique rows, but got "
+        f"{read_csv(private_dest / 'answers.csv').drop_duplicates().shape[0]} unique rows and "
+        f"{len(read_csv(private_dest / 'answers.csv'))} rows in total."
+    )
+
+    assert len(read_csv(private_dest / "answers.csv")) == len(
+        read_csv(public_dest / "sampleSubmission.csv")
+    ), (
+        f"Expected `answers.csv` and `sampleSubmission.csv` to have the same number of rows, but "
+        f"got {len(read_csv(private_dest / 'answers.csv'))} rows in `answers.csv` and "
+        f"{len(read_csv(public_dest / 'sampleSubmission.csv'))} rows in `sampleSubmission.csv`."
+    )
+
+    assert "id" in read_csv(private_dest / "answers.csv").columns, (
+        f"Expected `answers.csv` to have an 'id' column, but got "
+        f"{read_csv(private_dest / 'answers.csv').columns}."
+    )
+
+    assert "value" in read_csv(private_dest / "answers.csv").columns, (
+        f"Expected `answers.csv` to have a 'value' column, but got "
+        f"{read_csv(private_dest / 'answers.csv').columns}."
+    )
+
+    assert "id" in read_csv(public_dest / "sampleSubmission.csv").columns, (
+        f"Expected `sampleSubmission.csv` to have an 'id' column, but got "
+        f"{read_csv(public_dest / 'sampleSubmission.csv').columns}."
+    )
+
+    assert "value" in read_csv(public_dest / "sampleSubmission.csv").columns, (
+        f"Expected `sampleSubmission.csv` to have a 'value' column, but got "
+        f"{read_csv(public_dest / 'sampleSubmission.csv').columns}."
+    )
+
+
+def prepare(raw: Path, public: Path, private: Path) -> None:
+    # Define paths for the new validation split
+    public_val = public.parent / "public_val"
+    private_val = private.parent / "private_val"
+
+    # Use a temporary directory to extract raw data to avoid side-effects
+    temp_source_dir = public.parent / "temp_data_source"
+    if temp_source_dir.exists():
+        shutil.rmtree(temp_source_dir)
+    temp_source_dir.mkdir(parents=True)
+
+    # Extract all necessary data once
+    extract(raw / "train.zip", temp_source_dir)
+    extract(raw / "train_cleaned.zip", temp_source_dir)
+    all_img_fpaths = sorted((temp_source_dir / "train").glob("*.png"))
+
+    # --- First Split: The Original Train/Test Split ---
+    # We set new test ratio to 0.2 to keep it number of train samples at same OOM while having enough samples for new test
+    orig_train_fpaths, orig_test_fpaths = train_test_split(
+        all_img_fpaths,
+        test_size=0.2,
+        random_state=0,
+    )
+    # Generate artifacts for the original public/private directories
+    _generate_split_artifacts(orig_train_fpaths, orig_test_fpaths, temp_source_dir, public, private)
+
+    # --- Second Split: Create Train/Validation Split from the Original Train Set ---
+    # To keep the new validation set size similar to the original test set size,
+    # we use test_size=0.25 (since 0.25 * 0.8 = 0.2).
+    new_train_fpaths, val_fpaths = train_test_split(
+        orig_train_fpaths, # Split the original training data again
+        test_size=0.25,
+        random_state=0,
+    )
+    # Generate artifacts for the new validation directories (public_val/private_val)
+    _generate_split_artifacts(new_train_fpaths, val_fpaths, temp_source_dir, public_val, private_val)
+
+    # Clean up the temporary source directory
+    shutil.rmtree(temp_source_dir)
+
+
+def to_df(img: Path) -> DataFrame:
+    """Converts an image to a DataFrame, where each row corresponds to a pixel."""
+
+    image = Image.open(img).convert("L")
+    image_array = np.array(image) / 255.0
+
+    rows, cols = image_array.shape
+    data = {"id": [], "value": []}
+
+    for row in range(rows):
+        for col in range(cols):
+            pixel_id = f"{img.stem}_{row+1}_{col+1}"
+            pixel_value = image_array[row, col]
+            data["id"].append(pixel_id)
+            data["value"].append(pixel_value)
+
+    df = DataFrame(data)
+
+    assert (
+        len(df) == rows * cols
+    ), f"Expected the DataFrame to have {rows * cols} rows, but got {len(df)} rows."
+
+    return DataFrame(data)

mlebench/competitions/detecting-insults-in-social-commentary/grade.py

@@ -0,0 +1,11 @@
+import pandas as pd
+from sklearn.metrics import roc_auc_score
+
+from mlebench.competitions.utils import prepare_for_auroc_metric
+
+
+def grade(submission: pd.DataFrame, answers: pd.DataFrame) -> float:
+    roc_auc_inputs = prepare_for_auroc_metric(
+        submission=submission, answers=answers, id_col="Comment", target_col="Insult"
+    )
+    return roc_auc_score(y_true=roc_auc_inputs["y_true"], y_score=roc_auc_inputs["y_score"])

mlebench/competitions/detecting-insults-in-social-commentary/prepare.py

@@ -0,0 +1,72 @@
+import shutil
+from pathlib import Path
+
+from mlebench.utils import read_csv
+
+
+def prepare(raw: Path, public: Path, private: Path):
+    # the test set labels are provided so we can just copy things without doing the split ourselves
+    shutil.copy(raw / "train.csv", public / "train.csv")
+    shutil.copy(raw / "test_with_solutions.csv", private / "test.csv")
+
+    # the public test currently online is for the verification stage, which we are ignoring
+    # (we are ignoring because there is some train/test leakage and unclear how this factors in leaderboard)
+    # we can recover the original public test set by removing the labels from the private test set
+    # can make the gold submission while we're at it
+    gold_submission = read_csv(private / "test.csv")
+    gold_submission = gold_submission[["Insult", "Date", "Comment"]]
+    gold_submission.to_csv(private / "gold_submission.csv", index=False)
+
+    public_test = gold_submission.drop(columns=["Insult"]).copy()
+    public_test.to_csv(public / "test.csv", index=False)
+
+    # finally, we also make our own sample_submission, same reasons as public test
+    # but match the format of what's online
+    sample_submission = gold_submission.copy()
+    sample_submission["Insult"] = 0
+    sample_submission.to_csv(public / "sample_submission_null.csv", index=False)
+
+    # checks
+    public_train = read_csv(public / "train.csv")
+    public_test = read_csv(public / "test.csv")
+    private_test = read_csv(private / "test.csv")
+
+    # no `Id` column in train, so we check comment content instead
+    assert public_train.columns.to_list() == [
+        "Insult",
+        "Date",
+        "Comment",
+    ], "Train columns should be Insult, Date, Comment"
+    assert public_test.columns.to_list() == [
+        "Date",
+        "Comment",
+    ], "Test columns should be Date, Comment"
+    assert sample_submission.columns.to_list() == [
+        "Insult",
+        "Date",
+        "Comment",
+    ], "Sample submission columns should be Insult, Date, Comment"
+    assert gold_submission.columns.to_list() == [
+        "Insult",
+        "Date",
+        "Comment",
+    ], "Gold submission columns should be Insult, Date, Comment"
+    assert private_test.columns.to_list() == [
+        "Insult",
+        "Date",
+        "Comment",
+        "Usage",
+    ], "Private test columns should be Insult, Date, Comment, Usage"
+
+    assert set(public_train["Comment"]).isdisjoint(
+        set(public_test["Comment"])
+    ), "None of the test comments should be in the train comments"
+    assert public_test.equals(
+        private_test.drop(columns=["Insult", "Usage"])
+    ), "Public test should be identical to private test, modulo the Insult and Usage columns"
+    assert set(public_test["Comment"]) == set(
+        sample_submission["Comment"]
+    ), "Public test and sample submission should have the same Comments"
+    assert set(public_test["Comment"]) == set(
+        gold_submission["Comment"]
+    ), "Public test and gold submission should have the same Comments"

mlebench/competitions/detecting-insults-in-social-commentary/prepare_val.py

@@ -0,0 +1,128 @@
+import shutil
+from pathlib import Path
+
+import pandas as pd
+from sklearn.model_selection import train_test_split
+
+from mlebench.utils import read_csv
+
+
+def _create_split_files(
+    train_df: pd.DataFrame,
+    test_df_with_solutions: pd.DataFrame,
+    public_dir: Path,
+    private_dir: Path,
+):
+    """
+    Helper function to create the standard file structure for a given data split.
+
+    This function encapsulates the logic for generating:
+    - public/train.csv
+    - public/test.csv (unlabeled)
+    - public/sample_submission_null.csv
+    - private/test.csv (labeled, ground truth)
+    - private/gold_submission.csv
+    """
+    # Create directories if they don't exist
+    public_dir.mkdir(exist_ok=True)
+    private_dir.mkdir(exist_ok=True)
+
+    # Save the training data
+    train_df.to_csv(public_dir / "train.csv", index=False)
+
+    # Save the full test set with solutions to the private directory
+    test_df_with_solutions.to_csv(private_dir / "test.csv", index=False)
+
+    # Create the gold submission from the private test set
+    gold_submission = test_df_with_solutions[["Insult", "Date", "Comment"]].copy()
+    gold_submission.to_csv(private_dir / "gold_submission.csv", index=False)
+
+    # Create the public test set by dropping the label
+    public_test = gold_submission.drop(columns=["Insult"]).copy()
+    public_test.to_csv(public_dir / "test.csv", index=False)
+
+    # Create a sample submission with null labels
+    sample_submission = gold_submission.copy()
+    sample_submission["Insult"] = 0
+    sample_submission.to_csv(public_dir / "sample_submission_null.csv", index=False)
+
+
+def prepare(raw: Path, public: Path, private: Path):
+    # Load the original, pre-split data from the raw directory
+    original_train_df = read_csv(raw / "train.csv")
+    original_test_df = read_csv(raw / "test_with_solutions.csv")
+
+    # --- Part 1: Generate the original public/private split ---
+    # This block uses the original data to create the competition's primary
+    # train/test split, ensuring the output is identical to the original script.
+    _create_split_files(original_train_df, original_test_df, public, private)
+
+    # --- Part 2: Generate the new validation split ---
+    # This block creates a new split for local validation. It takes the original
+    # training data and splits it again, creating a new, smaller training set
+    # and a validation set. The outputs are saved to parallel directories.
+
+    # Define paths for the new validation set directories
+    public_val = public.parent / "public_val"
+    private_val = private.parent / "private_val"
+
+    # Split the original training data to create a new train and validation set.
+    # The size of the validation set is chosen to be the same as the original test set.
+    # We stratify on the 'Insult' column to maintain label distribution.
+    train_val_df, test_val_df = train_test_split(
+        original_train_df,
+        test_size=len(original_test_df),
+        random_state=42,
+        stratify=original_train_df["Insult"],
+    )
+
+    # Use the same helper function to create the files for the validation split,
+    # ensuring an identical directory structure and naming convention.
+    _create_split_files(train_val_df, test_val_df, public_val, private_val)
+
+    # --- Final Checks ---
+    # checks for the original split
+    public_train = read_csv(public / "train.csv")
+    public_test = read_csv(public / "test.csv")
+    private_test = read_csv(private / "test.csv")
+    sample_submission = read_csv(public / "sample_submission_null.csv")
+    gold_submission = read_csv(private / "gold_submission.csv")
+
+    assert public_train.columns.to_list() == [
+        "Insult",
+        "Date",
+        "Comment",
+    ], "Train columns should be Insult, Date, Comment"
+    assert public_test.columns.to_list() == [
+        "Date",
+        "Comment",
+    ], "Test columns should be Date, Comment"
+    assert sample_submission.columns.to_list() == [
+        "Insult",
+        "Date",
+        "Comment",
+    ], "Sample submission columns should be Insult, Date, Comment"
+    assert gold_submission.columns.to_list() == [
+        "Insult",
+        "Date",
+        "Comment",
+    ], "Gold submission columns should be Insult, Date, Comment"
+    assert private_test.columns.to_list() == [
+        "Insult",
+        "Date",
+        "Comment",
+        "Usage",
+    ], "Private test columns should be Insult, Date, Comment, Usage"
+
+    assert set(public_train["Comment"]).isdisjoint(
+        set(public_test["Comment"])
+    ), "None of the test comments should be in the train comments"
+    assert public_test.equals(
+        private_test.drop(columns=["Insult", "Usage"])
+    ), "Public test should be identical to private test, modulo the Insult and Usage columns"
+    assert set(public_test["Comment"]) == set(
+        sample_submission["Comment"]
+    ), "Public test and sample submission should have the same Comments"
+    assert set(public_test["Comment"]) == set(
+        gold_submission["Comment"]
+    ), "Public test and gold submission should have the same Comments"