driftlessmap 1.1.0__py3-none-any.whl

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Files changed (210) hide show
  1. driftlessmap/__init__.py +16 -0
  2. driftlessmap/__main__.py +5 -0
  3. driftlessmap/about.py +24 -0
  4. driftlessmap/allen_downloader.py +908 -0
  5. driftlessmap/app.py +8085 -0
  6. driftlessmap/atlas_downloader.py +370 -0
  7. driftlessmap/atlas_loader.py +526 -0
  8. driftlessmap/atlas_processor.py +784 -0
  9. driftlessmap/atlas_transform.py +111 -0
  10. driftlessmap/atlas_view.py +1435 -0
  11. driftlessmap/cell_detection.py +27 -0
  12. driftlessmap/coordinate_validation.py +19 -0
  13. driftlessmap/czi_reader.py +236 -0
  14. driftlessmap/data/WHS_atlas_labels.pkl +0 -0
  15. driftlessmap/data/allen_mice_atlas_labels.pkl +0 -0
  16. driftlessmap/data/atlas_labels.pkl +0 -0
  17. driftlessmap/data/query.csv +1328 -0
  18. driftlessmap/download_utils.py +85 -0
  19. driftlessmap/herbs.png +0 -0
  20. driftlessmap/icons/backward.svg +15 -0
  21. driftlessmap/icons/dot.svg +11 -0
  22. driftlessmap/icons/down-arrow.svg +10 -0
  23. driftlessmap/icons/fast_backward.svg +14 -0
  24. driftlessmap/icons/fast_forward.svg +14 -0
  25. driftlessmap/icons/forward.svg +14 -0
  26. driftlessmap/icons/layers/add.png +0 -0
  27. driftlessmap/icons/layers/ai.png +0 -0
  28. driftlessmap/icons/layers/eye_off.png +0 -0
  29. driftlessmap/icons/layers/eye_on.png +0 -0
  30. driftlessmap/icons/layers/eye_white.png +0 -0
  31. driftlessmap/icons/layers/hi.png +0 -0
  32. driftlessmap/icons/layers/trash.png +0 -0
  33. driftlessmap/icons/object.svg +22 -0
  34. driftlessmap/icons/sidebar/add.png +0 -0
  35. driftlessmap/icons/sidebar/atlascontrol.png +0 -0
  36. driftlessmap/icons/sidebar/atlascontrol.svg +32 -0
  37. driftlessmap/icons/sidebar/bnd.svg +14 -0
  38. driftlessmap/icons/sidebar/c_section.png +0 -0
  39. driftlessmap/icons/sidebar/c_section2.png +0 -0
  40. driftlessmap/icons/sidebar/cell.svg +24 -0
  41. driftlessmap/icons/sidebar/check.svg +9 -0
  42. driftlessmap/icons/sidebar/compare.svg +18 -0
  43. driftlessmap/icons/sidebar/contour.svg +14 -0
  44. driftlessmap/icons/sidebar/h_section.png +0 -0
  45. driftlessmap/icons/sidebar/info.svg +14 -0
  46. driftlessmap/icons/sidebar/layers.png +0 -0
  47. driftlessmap/icons/sidebar/layers.svg +23 -0
  48. driftlessmap/icons/sidebar/line.svg +10 -0
  49. driftlessmap/icons/sidebar/link.svg +18 -0
  50. driftlessmap/icons/sidebar/link_off.svg +18 -0
  51. driftlessmap/icons/sidebar/merge.svg +11 -0
  52. driftlessmap/icons/sidebar/object.svg +13 -0
  53. driftlessmap/icons/sidebar/probe.png +0 -0
  54. driftlessmap/icons/sidebar/probe.svg +23 -0
  55. driftlessmap/icons/sidebar/rotation_horizontal.svg +14 -0
  56. driftlessmap/icons/sidebar/rotation_vertical.svg +14 -0
  57. driftlessmap/icons/sidebar/s_section.png +0 -0
  58. driftlessmap/icons/sidebar/tool.png +0 -0
  59. driftlessmap/icons/sidebar/tool.svg +19 -0
  60. driftlessmap/icons/sidebar/trash.png +0 -0
  61. driftlessmap/icons/sidebar/tree_checked.svg +10 -0
  62. driftlessmap/icons/sidebar/treeview.png +0 -0
  63. driftlessmap/icons/sidebar/treeview.svg +10 -0
  64. driftlessmap/icons/sidebar/treeview2.png +0 -0
  65. driftlessmap/icons/sidebar/virus.svg +24 -0
  66. driftlessmap/icons/tdown.svg +16 -0
  67. driftlessmap/icons/toolbar/accept.svg +18 -0
  68. driftlessmap/icons/toolbar/accept2.svg +24 -0
  69. driftlessmap/icons/toolbar/aim.svg +44 -0
  70. driftlessmap/icons/toolbar/aim_not.svg +28 -0
  71. driftlessmap/icons/toolbar/anchor.svg +14 -0
  72. driftlessmap/icons/toolbar/anticlockwise_rotation.svg +12 -0
  73. driftlessmap/icons/toolbar/atlas_icon.png +0 -0
  74. driftlessmap/icons/toolbar/boundary_register.svg +18 -0
  75. driftlessmap/icons/toolbar/cancel.svg +32 -0
  76. driftlessmap/icons/toolbar/cell_select.svg +22 -0
  77. driftlessmap/icons/toolbar/cell_select_not.svg +12 -0
  78. driftlessmap/icons/toolbar/check.svg +9 -0
  79. driftlessmap/icons/toolbar/clockwise_rotation.svg +11 -0
  80. driftlessmap/icons/toolbar/closed_path.svg +16 -0
  81. driftlessmap/icons/toolbar/closed_path2 copy.svg +19 -0
  82. driftlessmap/icons/toolbar/closed_path2.svg +20 -0
  83. driftlessmap/icons/toolbar/eraser.png +0 -0
  84. driftlessmap/icons/toolbar/eraser.svg +19 -0
  85. driftlessmap/icons/toolbar/eye.svg +17 -0
  86. driftlessmap/icons/toolbar/eye_closed.svg +19 -0
  87. driftlessmap/icons/toolbar/fill.svg +12 -0
  88. driftlessmap/icons/toolbar/gps.svg +15 -0
  89. driftlessmap/icons/toolbar/h_flip.png +0 -0
  90. driftlessmap/icons/toolbar/handle.png +0 -0
  91. driftlessmap/icons/toolbar/image_icon.png +0 -0
  92. driftlessmap/icons/toolbar/image_icon.svg +25 -0
  93. driftlessmap/icons/toolbar/info.svg +14 -0
  94. driftlessmap/icons/toolbar/inpart.png +0 -0
  95. driftlessmap/icons/toolbar/inpart.svg +17 -0
  96. driftlessmap/icons/toolbar/lasso.png +0 -0
  97. driftlessmap/icons/toolbar/lasso.svg +14 -0
  98. driftlessmap/icons/toolbar/left90.png +0 -0
  99. driftlessmap/icons/toolbar/line.svg +10 -0
  100. driftlessmap/icons/toolbar/line_sites.svg +11 -0
  101. driftlessmap/icons/toolbar/linear_silicon.png +0 -0
  102. driftlessmap/icons/toolbar/linear_silicon.svg +88 -0
  103. driftlessmap/icons/toolbar/list.svg +14 -0
  104. driftlessmap/icons/toolbar/location.svg +14 -0
  105. driftlessmap/icons/toolbar/magic-wand.svg +16 -0
  106. driftlessmap/icons/toolbar/magic_white.png +0 -0
  107. driftlessmap/icons/toolbar/mask.svg +10 -0
  108. driftlessmap/icons/toolbar/match.svg +20 -0
  109. driftlessmap/icons/toolbar/matchbnd.svg +18 -0
  110. driftlessmap/icons/toolbar/matching.svg +36 -0
  111. driftlessmap/icons/toolbar/merge.svg +11 -0
  112. driftlessmap/icons/toolbar/move_down.png +0 -0
  113. driftlessmap/icons/toolbar/move_left.png +0 -0
  114. driftlessmap/icons/toolbar/move_right.png +0 -0
  115. driftlessmap/icons/toolbar/move_up.png +0 -0
  116. driftlessmap/icons/toolbar/moving.png +0 -0
  117. driftlessmap/icons/toolbar/multi-probe.svg +119 -0
  118. driftlessmap/icons/toolbar/multi_pencil.svg +23 -0
  119. driftlessmap/icons/toolbar/multi_probe.png +0 -0
  120. driftlessmap/icons/toolbar/object.svg +13 -0
  121. driftlessmap/icons/toolbar/open_path.svg +22 -0
  122. driftlessmap/icons/toolbar/outpart.png +0 -0
  123. driftlessmap/icons/toolbar/outpart.svg +26 -0
  124. driftlessmap/icons/toolbar/pencil.png +0 -0
  125. driftlessmap/icons/toolbar/pencil.svg +19 -0
  126. driftlessmap/icons/toolbar/plasso.png +0 -0
  127. driftlessmap/icons/toolbar/probe.svg +19 -0
  128. driftlessmap/icons/toolbar/radar.svg +32 -0
  129. driftlessmap/icons/toolbar/rotation.svg +45 -0
  130. driftlessmap/icons/toolbar/rotation_clockwise.svg +18 -0
  131. driftlessmap/icons/toolbar/rotation_counter_clockwise.svg +18 -0
  132. driftlessmap/icons/toolbar/ruler.svg +27 -0
  133. driftlessmap/icons/toolbar/separate_sites.svg +13 -0
  134. driftlessmap/icons/toolbar/single_pencil.svg +16 -0
  135. driftlessmap/icons/toolbar/toa.svg +11 -0
  136. driftlessmap/icons/toolbar/toa_delete.svg +36 -0
  137. driftlessmap/icons/toolbar/toaa.svg +11 -0
  138. driftlessmap/icons/toolbar/toh.svg +11 -0
  139. driftlessmap/icons/toolbar/toh_delete.svg +36 -0
  140. driftlessmap/icons/toolbar/tohh.svg +11 -0
  141. driftlessmap/icons/toolbar/trans.png +0 -0
  142. driftlessmap/icons/toolbar/trans.svg +16 -0
  143. driftlessmap/icons/toolbar/triangulation.svg +10 -0
  144. driftlessmap/icons/toolbar/two_window.png +0 -0
  145. driftlessmap/icons/toolbar/unmerge.svg +16 -0
  146. driftlessmap/icons/toolbar/v_flip.png +0 -0
  147. driftlessmap/icons/toolbar/virus.svg +24 -0
  148. driftlessmap/icons/toolbar/virus_register.svg +31 -0
  149. driftlessmap/icons/toolbar/vis2d.svg +29 -0
  150. driftlessmap/icons/toolbar/window2.png +0 -0
  151. driftlessmap/icons/toolbar/window3.png +0 -0
  152. driftlessmap/icons/toolbar/window4.png +0 -0
  153. driftlessmap/icons/tree_close.svg +14 -0
  154. driftlessmap/icons/tree_open.svg +14 -0
  155. driftlessmap/icons/up-arrow.svg +10 -0
  156. driftlessmap/image_curves.py +579 -0
  157. driftlessmap/image_reader.py +186 -0
  158. driftlessmap/image_stacks.py +359 -0
  159. driftlessmap/image_view.py +646 -0
  160. driftlessmap/images_reader.py +5 -0
  161. driftlessmap/label_tree.py +278 -0
  162. driftlessmap/layer_validation.py +25 -0
  163. driftlessmap/layers_control.py +554 -0
  164. driftlessmap/main_window.ui +883 -0
  165. driftlessmap/movable_points.py +254 -0
  166. driftlessmap/obj_items.py +122 -0
  167. driftlessmap/object_control.py +1762 -0
  168. driftlessmap/persistence.py +376 -0
  169. driftlessmap/popup_message.py +16 -0
  170. driftlessmap/probe_csv.py +319 -0
  171. driftlessmap/probe_reconstruction.py +409 -0
  172. driftlessmap/probe_utiles.py +1442 -0
  173. driftlessmap/qss/atlas_view_group_box.qss +15 -0
  174. driftlessmap/qss/box_label.qss +7 -0
  175. driftlessmap/qss/channel_selector.qss +19 -0
  176. driftlessmap/qss/color_combo.qss +121 -0
  177. driftlessmap/qss/decor_label.qss +9 -0
  178. driftlessmap/qss/dialogs.qss +11 -0
  179. driftlessmap/qss/hidden_line_edit.qss +5 -0
  180. driftlessmap/qss/label_tree.qss +123 -0
  181. driftlessmap/qss/main_window.qss +243 -0
  182. driftlessmap/qss/menu_bar.qss +42 -0
  183. driftlessmap/qss/multi_handle_slider.qss +14 -0
  184. driftlessmap/qss/obj_ctrl_bottom_button.qss +29 -0
  185. driftlessmap/qss/object_text_button.qss +19 -0
  186. driftlessmap/qss/page_control.qss +36 -0
  187. driftlessmap/qss/rotation_button.qss +9 -0
  188. driftlessmap/qss/side_bar.qss +23 -0
  189. driftlessmap/qss/spinbox.qss +106 -0
  190. driftlessmap/qss/tabs.qss +211 -0
  191. driftlessmap/qss/tool_bar.qss +77 -0
  192. driftlessmap/resources.py +34 -0
  193. driftlessmap/roi_analysis.py +375 -0
  194. driftlessmap/run_driftlessmap.py +4 -0
  195. driftlessmap/slice_stacks.py +268 -0
  196. driftlessmap/slice_validation.py +20 -0
  197. driftlessmap/toolbox.py +569 -0
  198. driftlessmap/triangulation.py +517 -0
  199. driftlessmap/triangulation_points.py +108 -0
  200. driftlessmap/user_settings.py +92 -0
  201. driftlessmap/uuuuuu.py +1168 -0
  202. driftlessmap/version.py +3 -0
  203. driftlessmap/widgets_utils.py +140 -0
  204. driftlessmap/wtiles.py +715 -0
  205. driftlessmap-1.1.0.dist-info/METADATA +186 -0
  206. driftlessmap-1.1.0.dist-info/RECORD +210 -0
  207. driftlessmap-1.1.0.dist-info/WHEEL +5 -0
  208. driftlessmap-1.1.0.dist-info/entry_points.txt +2 -0
  209. driftlessmap-1.1.0.dist-info/licenses/LICENSE.txt +23 -0
  210. driftlessmap-1.1.0.dist-info/top_level.txt +1 -0

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