dnt 0.2.1__py3-none-any.whl → 0.3.1.8__py3-none-any.whl

dnt/track/botsort/bot_tracker/gmc.py

@@ -0,0 +1,316 @@
+import cv2
+import matplotlib.pyplot as plt
+import numpy as np
+import copy
+import time
+
+
+class GMC:
+    def __init__(self, method='sparseOptFlow', downscale=2, verbose=None):
+        super(GMC, self).__init__()
+
+        self.method = method
+        self.downscale = max(1, int(downscale))
+
+        if self.method == 'orb':
+            self.detector = cv2.FastFeatureDetector_create(20)
+            self.extractor = cv2.ORB_create()
+            self.matcher = cv2.BFMatcher(cv2.NORM_HAMMING)
+
+        elif self.method == 'sift':
+            self.detector = cv2.SIFT_create(nOctaveLayers=3, contrastThreshold=0.02, edgeThreshold=20)
+            self.extractor = cv2.SIFT_create(nOctaveLayers=3, contrastThreshold=0.02, edgeThreshold=20)
+            self.matcher = cv2.BFMatcher(cv2.NORM_L2)
+
+        elif self.method == 'ecc':
+            number_of_iterations = 5000
+            termination_eps = 1e-6
+            self.warp_mode = cv2.MOTION_EUCLIDEAN
+            self.criteria = (cv2.TERM_CRITERIA_EPS | cv2.TERM_CRITERIA_COUNT, number_of_iterations, termination_eps)
+
+        elif self.method == 'sparseOptFlow':
+            self.feature_params = dict(maxCorners=1000, qualityLevel=0.01, minDistance=1, blockSize=3,
+                                       useHarrisDetector=False, k=0.04)
+            # self.gmc_file = open('GMC_results.txt', 'w')
+
+        elif self.method == 'file' or self.method == 'files':
+            seqName = verbose[0]
+            ablation = verbose[1]
+            if ablation:
+                filePath = r'bot_tracker/GMC_files/MOT17_ablation'
+            else:
+                filePath = r'bot_tracker/GMC_files/MOTChallenge'
+
+            if '-FRCNN' in seqName:
+                seqName = seqName[:-6]
+            elif '-DPM' in seqName:
+                seqName = seqName[:-4]
+            elif '-SDP' in seqName:
+                seqName = seqName[:-4]
+
+            self.gmcFile = open(filePath + "/GMC-" + seqName + ".txt", 'r')
+
+            if self.gmcFile is None:
+                raise ValueError("Error: Unable to open GMC file in directory:" + filePath)
+        elif self.method == 'none' or self.method == 'None':
+            self.method = 'none'
+        else:
+            raise ValueError("Error: Unknown CMC method:" + method)
+
+        self.prevFrame = None
+        self.prevKeyPoints = None
+        self.prevDescriptors = None
+
+        self.initializedFirstFrame = False
+
+    def apply(self, raw_frame, detections=None):
+        if self.method == 'orb' or self.method == 'sift':
+            return self.applyFeaures(raw_frame, detections)
+        elif self.method == 'ecc':
+            return self.applyEcc(raw_frame, detections)
+        elif self.method == 'sparseOptFlow':
+            return self.applySparseOptFlow(raw_frame, detections)
+        elif self.method == 'file':
+            return self.applyFile(raw_frame, detections)
+        elif self.method == 'none':
+            return np.eye(2, 3)
+        else:
+            return np.eye(2, 3)
+
+    def applyEcc(self, raw_frame, detections=None):
+
+        # Initialize
+        height, width, _ = raw_frame.shape
+        frame = cv2.cvtColor(raw_frame, cv2.COLOR_BGR2GRAY)
+        H = np.eye(2, 3, dtype=np.float32)
+
+        # Downscale image (TODO: consider using pyramids)
+        if self.downscale > 1.0:
+            frame = cv2.GaussianBlur(frame, (3, 3), 1.5)
+            frame = cv2.resize(frame, (width // self.downscale, height // self.downscale))
+            width = width // self.downscale
+            height = height // self.downscale
+
+        # Handle first frame
+        if not self.initializedFirstFrame:
+            # Initialize data
+            self.prevFrame = frame.copy()
+
+            # Initialization done
+            self.initializedFirstFrame = True
+
+            return H
+
+        # Run the ECC algorithm. The results are stored in warp_matrix.
+        # (cc, H) = cv2.findTransformECC(self.prevFrame, frame, H, self.warp_mode, self.criteria)
+        try:
+            (cc, H) = cv2.findTransformECC(self.prevFrame, frame, H, self.warp_mode, self.criteria, None, 1)
+        except:
+            print('Warning: find transform failed. Set warp as identity')
+
+        return H
+
+    def applyFeaures(self, raw_frame, detections=None):
+
+        # Initialize
+        height, width, _ = raw_frame.shape
+        frame = cv2.cvtColor(raw_frame, cv2.COLOR_BGR2GRAY)
+        H = np.eye(2, 3)
+
+        # Downscale image (TODO: consider using pyramids)
+        if self.downscale > 1.0:
+            # frame = cv2.GaussianBlur(frame, (3, 3), 1.5)
+            frame = cv2.resize(frame, (width // self.downscale, height // self.downscale))
+            width = width // self.downscale
+            height = height // self.downscale
+
+        # find the keypoints
+        mask = np.zeros_like(frame)
+        # mask[int(0.05 * height): int(0.95 * height), int(0.05 * width): int(0.95 * width)] = 255
+        mask[int(0.02 * height): int(0.98 * height), int(0.02 * width): int(0.98 * width)] = 255
+        if detections is not None:
+            for det in detections:
+                tlbr = (det[:4] / self.downscale).astype(np.int_)
+                mask[tlbr[1]:tlbr[3], tlbr[0]:tlbr[2]] = 0
+
+        keypoints = self.detector.detect(frame, mask)
+
+        # compute the descriptors
+        keypoints, descriptors = self.extractor.compute(frame, keypoints)
+
+        # Handle first frame
+        if not self.initializedFirstFrame:
+            # Initialize data
+            self.prevFrame = frame.copy()
+            self.prevKeyPoints = copy.copy(keypoints)
+            self.prevDescriptors = copy.copy(descriptors)
+
+            # Initialization done
+            self.initializedFirstFrame = True
+
+            return H
+
+        # Match descriptors.
+        knnMatches = self.matcher.knnMatch(self.prevDescriptors, descriptors, 2)
+
+        # Filtered matches based on smallest spatial distance
+        matches = []
+        spatialDistances = []
+
+        maxSpatialDistance = 0.25 * np.array([width, height])
+
+        # Handle empty matches case
+        if len(knnMatches) == 0:
+            # Store to next iteration
+            self.prevFrame = frame.copy()
+            self.prevKeyPoints = copy.copy(keypoints)
+            self.prevDescriptors = copy.copy(descriptors)
+
+            return H
+
+        for m, n in knnMatches:
+            if m.distance < 0.9 * n.distance:
+                prevKeyPointLocation = self.prevKeyPoints[m.queryIdx].pt
+                currKeyPointLocation = keypoints[m.trainIdx].pt
+
+                spatialDistance = (prevKeyPointLocation[0] - currKeyPointLocation[0],
+                                   prevKeyPointLocation[1] - currKeyPointLocation[1])
+
+                if (np.abs(spatialDistance[0]) < maxSpatialDistance[0]) and \
+                        (np.abs(spatialDistance[1]) < maxSpatialDistance[1]):
+                    spatialDistances.append(spatialDistance)
+                    matches.append(m)
+
+        meanSpatialDistances = np.mean(spatialDistances, 0)
+        stdSpatialDistances = np.std(spatialDistances, 0)
+
+        inliesrs = (spatialDistances - meanSpatialDistances) < 2.5 * stdSpatialDistances
+
+        goodMatches = []
+        prevPoints = []
+        currPoints = []
+        for i in range(len(matches)):
+            if inliesrs[i, 0] and inliesrs[i, 1]:
+                goodMatches.append(matches[i])
+                prevPoints.append(self.prevKeyPoints[matches[i].queryIdx].pt)
+                currPoints.append(keypoints[matches[i].trainIdx].pt)
+
+        prevPoints = np.array(prevPoints)
+        currPoints = np.array(currPoints)
+
+        # Draw the keypoint matches on the output image
+        if 0:
+            matches_img = np.hstack((self.prevFrame, frame))
+            matches_img = cv2.cvtColor(matches_img, cv2.COLOR_GRAY2BGR)
+            W = np.size(self.prevFrame, 1)
+            for m in goodMatches:
+                prev_pt = np.array(self.prevKeyPoints[m.queryIdx].pt, dtype=np.int_)
+                curr_pt = np.array(keypoints[m.trainIdx].pt, dtype=np.int_)
+                curr_pt[0] += W
+                color = np.random.randint(0, 255, (3,))
+                color = (int(color[0]), int(color[1]), int(color[2]))
+
+                matches_img = cv2.line(matches_img, prev_pt, curr_pt, tuple(color), 1, cv2.LINE_AA)
+                matches_img = cv2.circle(matches_img, prev_pt, 2, tuple(color), -1)
+                matches_img = cv2.circle(matches_img, curr_pt, 2, tuple(color), -1)
+
+            plt.figure()
+            plt.imshow(matches_img)
+            plt.show()
+
+        # Find rigid matrix
+        if (np.size(prevPoints, 0) > 4) and (np.size(prevPoints, 0) == np.size(prevPoints, 0)):
+            H, inliesrs = cv2.estimateAffinePartial2D(prevPoints, currPoints, cv2.RANSAC)
+
+            # Handle downscale
+            if self.downscale > 1.0:
+                H[0, 2] *= self.downscale
+                H[1, 2] *= self.downscale
+        else:
+            print('Warning: not enough matching points')
+
+        # Store to next iteration
+        self.prevFrame = frame.copy()
+        self.prevKeyPoints = copy.copy(keypoints)
+        self.prevDescriptors = copy.copy(descriptors)
+
+        return H
+
+    def applySparseOptFlow(self, raw_frame, detections=None):
+
+        t0 = time.time()
+
+        # Initialize
+        height, width, _ = raw_frame.shape
+        frame = cv2.cvtColor(raw_frame, cv2.COLOR_BGR2GRAY)
+        H = np.eye(2, 3)
+
+        # Downscale image
+        if self.downscale > 1.0:
+            # frame = cv2.GaussianBlur(frame, (3, 3), 1.5)
+            frame = cv2.resize(frame, (width // self.downscale, height // self.downscale))
+
+        # find the keypoints
+        keypoints = cv2.goodFeaturesToTrack(frame, mask=None, **self.feature_params)
+
+        # Handle first frame
+        if not self.initializedFirstFrame:
+            # Initialize data
+            self.prevFrame = frame.copy()
+            self.prevKeyPoints = copy.copy(keypoints)
+
+            # Initialization done
+            self.initializedFirstFrame = True
+
+            return H
+
+        # find correspondences
+        matchedKeypoints, status, err = cv2.calcOpticalFlowPyrLK(self.prevFrame, frame, self.prevKeyPoints, None)
+
+        # leave good correspondences only
+        prevPoints = []
+        currPoints = []
+
+        for i in range(len(status)):
+            if status[i]:
+                prevPoints.append(self.prevKeyPoints[i])
+                currPoints.append(matchedKeypoints[i])
+
+        prevPoints = np.array(prevPoints)
+        currPoints = np.array(currPoints)
+
+        # Find rigid matrix
+        if (np.size(prevPoints, 0) > 4) and (np.size(prevPoints, 0) == np.size(prevPoints, 0)):
+            H, inliesrs = cv2.estimateAffinePartial2D(prevPoints, currPoints, cv2.RANSAC)
+
+            # Handle downscale
+            if self.downscale > 1.0:
+                H[0, 2] *= self.downscale
+                H[1, 2] *= self.downscale
+        else:
+            print('Warning: not enough matching points')
+
+        # Store to next iteration
+        self.prevFrame = frame.copy()
+        self.prevKeyPoints = copy.copy(keypoints)
+
+        t1 = time.time()
+
+        # gmc_line = str(1000 * (t1 - t0)) + "\t" + str(H[0, 0]) + "\t" + str(H[0, 1]) + "\t" + str(
+        #     H[0, 2]) + "\t" + str(H[1, 0]) + "\t" + str(H[1, 1]) + "\t" + str(H[1, 2]) + "\n"
+        # self.gmc_file.write(gmc_line)
+
+        return H
+
+    def applyFile(self, raw_frame, detections=None):
+        line = self.gmcFile.readline()
+        tokens = line.split("\t")
+        H = np.eye(2, 3, dtype=np.float_)
+        H[0, 0] = float(tokens[1])
+        H[0, 1] = float(tokens[2])
+        H[0, 2] = float(tokens[3])
+        H[1, 0] = float(tokens[4])
+        H[1, 1] = float(tokens[5])
+        H[1, 2] = float(tokens[6])
+
+        return H

dnt/track/botsort/bot_tracker/kalman_filter.py

@@ -0,0 +1,269 @@
+# vim: expandtab:ts=4:sw=4
+import numpy as np
+import scipy.linalg
+
+
+"""
+Table for the 0.95 quantile of the chi-square distribution with N degrees of
+freedom (contains values for N=1, ..., 9). Taken from MATLAB/Octave's chi2inv
+function and used as Mahalanobis gating threshold.
+"""
+chi2inv95 = {
+    1: 3.8415,
+    2: 5.9915,
+    3: 7.8147,
+    4: 9.4877,
+    5: 11.070,
+    6: 12.592,
+    7: 14.067,
+    8: 15.507,
+    9: 16.919}
+
+
+class KalmanFilter(object):
+    """
+    A simple Kalman filter for tracking bounding boxes in image space.
+
+    The 8-dimensional state space
+
+        x, y, w, h, vx, vy, vw, vh
+
+    contains the bounding box center position (x, y), width w, height h,
+    and their respective velocities.
+
+    Object motion follows a constant velocity model. The bounding box location
+    (x, y, w, h) is taken as direct observation of the state space (linear
+    observation model).
+
+    """
+
+    def __init__(self):
+        ndim, dt = 4, 1.
+
+        # Create Kalman filter model matrices.
+        self._motion_mat = np.eye(2 * ndim, 2 * ndim)
+        for i in range(ndim):
+            self._motion_mat[i, ndim + i] = dt
+        self._update_mat = np.eye(ndim, 2 * ndim)
+
+        # Motion and observation uncertainty are chosen relative to the current
+        # state estimate. These weights control the amount of uncertainty in
+        # the model. This is a bit hacky.
+        self._std_weight_position = 1. / 20
+        self._std_weight_velocity = 1. / 160
+
+    def initiate(self, measurement):
+        """Create track from unassociated measurement.
+
+        Parameters
+        ----------
+        measurement : ndarray
+            Bounding box coordinates (x, y, w, h) with center position (x, y),
+            width w, and height h.
+
+        Returns
+        -------
+        (ndarray, ndarray)
+            Returns the mean vector (8 dimensional) and covariance matrix (8x8
+            dimensional) of the new track. Unobserved velocities are initialized
+            to 0 mean.
+
+        """
+        mean_pos = measurement
+        mean_vel = np.zeros_like(mean_pos)
+        mean = np.r_[mean_pos, mean_vel]
+
+        std = [
+            2 * self._std_weight_position * measurement[2],
+            2 * self._std_weight_position * measurement[3],
+            2 * self._std_weight_position * measurement[2],
+            2 * self._std_weight_position * measurement[3],
+            10 * self._std_weight_velocity * measurement[2],
+            10 * self._std_weight_velocity * measurement[3],
+            10 * self._std_weight_velocity * measurement[2],
+            10 * self._std_weight_velocity * measurement[3]]
+        covariance = np.diag(np.square(std))
+        return mean, covariance
+
+    def predict(self, mean, covariance):
+        """Run Kalman filter prediction step.
+
+        Parameters
+        ----------
+        mean : ndarray
+            The 8 dimensional mean vector of the object state at the previous
+            time step.
+        covariance : ndarray
+            The 8x8 dimensional covariance matrix of the object state at the
+            previous time step.
+
+        Returns
+        -------
+        (ndarray, ndarray)
+            Returns the mean vector and covariance matrix of the predicted
+            state. Unobserved velocities are initialized to 0 mean.
+
+        """
+        std_pos = [
+            self._std_weight_position * mean[2],
+            self._std_weight_position * mean[3],
+            self._std_weight_position * mean[2],
+            self._std_weight_position * mean[3]]
+        std_vel = [
+            self._std_weight_velocity * mean[2],
+            self._std_weight_velocity * mean[3],
+            self._std_weight_velocity * mean[2],
+            self._std_weight_velocity * mean[3]]
+        motion_cov = np.diag(np.square(np.r_[std_pos, std_vel]))
+
+        mean = np.dot(mean, self._motion_mat.T)
+        covariance = np.linalg.multi_dot((
+            self._motion_mat, covariance, self._motion_mat.T)) + motion_cov
+
+        return mean, covariance
+
+    def project(self, mean, covariance):
+        """Project state distribution to measurement space.
+
+        Parameters
+        ----------
+        mean : ndarray
+            The state's mean vector (8 dimensional array).
+        covariance : ndarray
+            The state's covariance matrix (8x8 dimensional).
+
+        Returns
+        -------
+        (ndarray, ndarray)
+            Returns the projected mean and covariance matrix of the given state
+            estimate.
+
+        """
+        std = [
+            self._std_weight_position * mean[2],
+            self._std_weight_position * mean[3],
+            self._std_weight_position * mean[2],
+            self._std_weight_position * mean[3]]
+        innovation_cov = np.diag(np.square(std))
+
+        mean = np.dot(self._update_mat, mean)
+        covariance = np.linalg.multi_dot((
+            self._update_mat, covariance, self._update_mat.T))
+        return mean, covariance + innovation_cov
+
+    def multi_predict(self, mean, covariance):
+        """Run Kalman filter prediction step (Vectorized version).
+        Parameters
+        ----------
+        mean : ndarray
+            The Nx8 dimensional mean matrix of the object states at the previous
+            time step.
+        covariance : ndarray
+            The Nx8x8 dimensional covariance matrics of the object states at the
+            previous time step.
+        Returns
+        -------
+        (ndarray, ndarray)
+            Returns the mean vector and covariance matrix of the predicted
+            state. Unobserved velocities are initialized to 0 mean.
+        """
+        std_pos = [
+            self._std_weight_position * mean[:, 2],
+            self._std_weight_position * mean[:, 3],
+            self._std_weight_position * mean[:, 2],
+            self._std_weight_position * mean[:, 3]]
+        std_vel = [
+            self._std_weight_velocity * mean[:, 2],
+            self._std_weight_velocity * mean[:, 3],
+            self._std_weight_velocity * mean[:, 2],
+            self._std_weight_velocity * mean[:, 3]]
+        sqr = np.square(np.r_[std_pos, std_vel]).T
+
+        motion_cov = []
+        for i in range(len(mean)):
+            motion_cov.append(np.diag(sqr[i]))
+        motion_cov = np.asarray(motion_cov)
+
+        mean = np.dot(mean, self._motion_mat.T)
+        left = np.dot(self._motion_mat, covariance).transpose((1, 0, 2))
+        covariance = np.dot(left, self._motion_mat.T) + motion_cov
+
+        return mean, covariance
+
+    def update(self, mean, covariance, measurement):
+        """Run Kalman filter correction step.
+
+        Parameters
+        ----------
+        mean : ndarray
+            The predicted state's mean vector (8 dimensional).
+        covariance : ndarray
+            The state's covariance matrix (8x8 dimensional).
+        measurement : ndarray
+            The 4 dimensional measurement vector (x, y, w, h), where (x, y)
+            is the center position, w the width, and h the height of the
+            bounding box.
+
+        Returns
+        -------
+        (ndarray, ndarray)
+            Returns the measurement-corrected state distribution.
+
+        """
+        projected_mean, projected_cov = self.project(mean, covariance)
+
+        chol_factor, lower = scipy.linalg.cho_factor(
+            projected_cov, lower=True, check_finite=False)
+        kalman_gain = scipy.linalg.cho_solve(
+            (chol_factor, lower), np.dot(covariance, self._update_mat.T).T,
+            check_finite=False).T
+        innovation = measurement - projected_mean
+
+        new_mean = mean + np.dot(innovation, kalman_gain.T)
+        new_covariance = covariance - np.linalg.multi_dot((
+            kalman_gain, projected_cov, kalman_gain.T))
+        return new_mean, new_covariance
+
+    def gating_distance(self, mean, covariance, measurements,
+                        only_position=False, metric='maha'):
+        """Compute gating distance between state distribution and measurements.
+        A suitable distance threshold can be obtained from `chi2inv95`. If
+        `only_position` is False, the chi-square distribution has 4 degrees of
+        freedom, otherwise 2.
+        Parameters
+        ----------
+        mean : ndarray
+            Mean vector over the state distribution (8 dimensional).
+        covariance : ndarray
+            Covariance of the state distribution (8x8 dimensional).
+        measurements : ndarray
+            An Nx4 dimensional matrix of N measurements, each in
+            format (x, y, a, h) where (x, y) is the bounding box center
+            position, a the aspect ratio, and h the height.
+        only_position : Optional[bool]
+            If True, distance computation is done with respect to the bounding
+            box center position only.
+        Returns
+        -------
+        ndarray
+            Returns an array of length N, where the i-th element contains the
+            squared Mahalanobis distance between (mean, covariance) and
+            `measurements[i]`.
+        """
+        mean, covariance = self.project(mean, covariance)
+        if only_position:
+            mean, covariance = mean[:2], covariance[:2, :2]
+            measurements = measurements[:, :2]
+
+        d = measurements - mean
+        if metric == 'gaussian':
+            return np.sum(d * d, axis=1)
+        elif metric == 'maha':
+            cholesky_factor = np.linalg.cholesky(covariance)
+            z = scipy.linalg.solve_triangular(
+                cholesky_factor, d.T, lower=True, check_finite=False,
+                overwrite_b=True)
+            squared_maha = np.sum(z * z, axis=0)
+            return squared_maha
+        else:
+            raise ValueError('invalid distance metric')