clinicedc 2.0.1__py3-none-any.whl → 2.0.3__py3-none-any.whl

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  1. {clinicedc-2.0.1.dist-info → clinicedc-2.0.3.dist-info}/METADATA +15 -22
  2. {clinicedc-2.0.1.dist-info → clinicedc-2.0.3.dist-info}/RECORD +854 -787
  3. {clinicedc-2.0.1.dist-info → clinicedc-2.0.3.dist-info}/WHEEL +1 -1
  4. edc_action_item/action.py +10 -30
  5. edc_action_item/action_with_notification.py +1 -2
  6. edc_action_item/admin/action_item_admin.py +2 -6
  7. edc_action_item/admin_site.py +1 -3
  8. edc_action_item/auths.py +1 -3
  9. edc_action_item/create_or_update_action_type.py +1 -3
  10. edc_action_item/data_fixers.py +6 -20
  11. edc_action_item/forms/action_item_form.py +1 -3
  12. edc_action_item/management/commands/inspect_action_items.py +3 -9
  13. edc_action_item/migrations/0001_initial.py +4 -5
  14. edc_action_item/migrations/0003_auto_20180116_1528.py +2 -1
  15. edc_action_item/migrations/0006_auto_20180707_1659.py +3 -4
  16. edc_action_item/migrations/0007_auto_20180707_1715.py +1 -3
  17. edc_action_item/migrations/0008_auto_20180809_0303.py +2 -1
  18. edc_action_item/migrations/0014_auto_20181121_1738.py +2 -6
  19. edc_action_item/migrations/0015_auto_20190114_0250.py +4 -3
  20. edc_action_item/migrations/0021_auto_20190628_2113.py +1 -3
  21. edc_action_item/migrations/0022_auto_20190628_2136.py +2 -6
  22. edc_action_item/migrations/0030_edcpermissions.py +1 -1
  23. edc_action_item/migrations/0033_alter_actionitem_managers.py +1 -0
  24. edc_action_item/migrations/0034_alter_actionitem_device_created_and_more.py +13 -37
  25. edc_action_item/models/action_item.py +2 -6
  26. edc_action_item/models/action_model_mixin.py +5 -16
  27. edc_action_item/models/action_type.py +1 -3
  28. edc_action_item/models/reference.py +1 -2
  29. edc_action_item/models/signals.py +3 -9
  30. edc_action_item/site_action_items.py +5 -15
  31. edc_action_item/templatetags/action_item_extras.py +1 -3
  32. edc_action_item/view_utils/action_item_button.py +1 -3
  33. edc_action_item/view_utils/action_item_popover_list_item.py +1 -2
  34. edc_adherence/migrations/0002_nonadherencereasons_plural_name.py +1 -3
  35. edc_adherence/model_admin_mixin.py +1 -3
  36. edc_adverse_event/action_items/ae_followup_action.py +2 -6
  37. edc_adverse_event/action_items/ae_initial_action.py +3 -7
  38. edc_adverse_event/auth_objects.py +2 -6
  39. edc_adverse_event/constants.py +1 -3
  40. edc_adverse_event/form_validator_mixins/death_report_form_validator.py +1 -3
  41. edc_adverse_event/form_validator_mixins/requires_death_report_form_validator_mixin.py +2 -7
  42. edc_adverse_event/form_validators/hospitalization.py +1 -3
  43. edc_adverse_event/migrations/0003_auto_20191026_2231.py +3 -9
  44. edc_adverse_event/migrations/0008_auto_20220825_0451.py +1 -1
  45. edc_adverse_event/migrations/0009_auto_20220907_0157.py +1 -1
  46. edc_adverse_event/migrations/0010_auto_20220913_2139.py +4 -12
  47. edc_adverse_event/migrations/0013_alter_aeactionclassification_device_created_and_more.py +11 -31
  48. edc_adverse_event/model_mixins/ae_followup/ae_followup_fields_model_mixin.py +1 -3
  49. edc_adverse_event/model_mixins/ae_followup/ae_followup_model_mixin.py +1 -5
  50. edc_adverse_event/model_mixins/ae_initial/ae_initial_ae_model_mixin.py +1 -3
  51. edc_adverse_event/model_mixins/ae_initial/ae_initial_fields_model_mixin.py +1 -3
  52. edc_adverse_event/model_mixins/ae_initial/ae_initial_susar_model_mixin.py +1 -2
  53. edc_adverse_event/model_mixins/ae_special_interest/aesi_model_mixin.py +1 -5
  54. edc_adverse_event/model_mixins/ae_susar/ae_susar_model_mixin.py +1 -5
  55. edc_adverse_event/model_mixins/ae_tmg/ae_tmg_fields_model_mixin.py +2 -6
  56. edc_adverse_event/model_mixins/ae_tmg/ae_tmg_model_mixin.py +1 -5
  57. edc_adverse_event/model_mixins/death_report/death_report_extra_fields_model_mixin.py +1 -2
  58. edc_adverse_event/model_mixins/death_report/death_report_model_mixin.py +2 -5
  59. edc_adverse_event/model_mixins/death_report/death_report_tmg_model_mixin.py +2 -7
  60. edc_adverse_event/model_mixins/death_report/simple_death_report_model_mixin.py +1 -3
  61. edc_adverse_event/modeladmin_mixins/ae_tmg_admin_mixin.py +1 -3
  62. edc_adverse_event/modeladmin_mixins/death_report_admin_mixin.py +6 -10
  63. edc_adverse_event/modelform_mixins/ae_tmg_modelform_mixin.py +1 -3
  64. edc_adverse_event/models/signals.py +3 -9
  65. edc_adverse_event/pdf_reports/ae_pdf_report.py +6 -18
  66. edc_adverse_event/pdf_reports/death_pdf_report.py +3 -9
  67. edc_adverse_event/templatetags/edc_adverse_event_extras.py +5 -15
  68. edc_adverse_event/utils.py +2 -6
  69. edc_adverse_event/view_mixins/ae/ae_listboard_view_mixin.py +1 -3
  70. edc_adverse_event/view_mixins/ae/death_report_listboard_view_mixin.py +1 -3
  71. edc_adverse_event/view_mixins/tmg/tmg_ae_listboard_view_mixin.py +2 -6
  72. edc_adverse_event/view_utils/tmg_button.py +2 -6
  73. edc_adverse_event/views/home_view.py +1 -3
  74. edc_adverse_event/views/tmg/death_listboard_view.py +1 -3
  75. edc_adverse_event/views/tmg/home_view.py +2 -6
  76. edc_adverse_event/views/tmg/summary_listboard_view.py +1 -3
  77. edc_appointment/admin/appointment_admin.py +1 -3
  78. edc_appointment/admin/list_filters.py +1 -3
  79. edc_appointment/admin_site.py +1 -3
  80. edc_appointment/analytics/dataframes/get_appointment_df.py +2 -6
  81. edc_appointment/appointment_reason_updater.py +2 -5
  82. edc_appointment/appointment_status_updater.py +1 -4
  83. edc_appointment/constants.py +1 -3
  84. edc_appointment/creators/appointment_creator.py +4 -10
  85. edc_appointment/creators/unscheduled_appointment_creator.py +3 -7
  86. edc_appointment/creators/utils.py +4 -0
  87. edc_appointment/form_validator_mixins/next_appointment_crf_form_validator_mixin.py +3 -10
  88. edc_appointment/form_validator_mixins/window_period_form_validator_mixin.py +3 -9
  89. edc_appointment/form_validators/appointment_form_validator.py +11 -37
  90. edc_appointment/form_validators/next_appointment_crf_form_validator.py +1 -3
  91. edc_appointment/form_validators/utils.py +1 -3
  92. edc_appointment/managers.py +2 -6
  93. edc_appointment/migrations/0002_auto_20161126_1156.py +5 -8
  94. edc_appointment/migrations/0003_auto_20161127_2226.py +7 -16
  95. edc_appointment/migrations/0006_auto_20170106_2118.py +2 -1
  96. edc_appointment/migrations/0008_auto_20171115_1601.py +3 -4
  97. edc_appointment/migrations/0014_auto_20180116_1411.py +2 -1
  98. edc_appointment/migrations/0024_auto_20200911_0425.py +1 -1
  99. edc_appointment/migrations/0034_appointmenttype_alter_appointment_appt_type_and_more.py +2 -4
  100. edc_appointment/migrations/0036_auto_20230124_1822.py +2 -6
  101. edc_appointment/migrations/0040_appointment_appt_type_other_and_more.py +1 -0
  102. edc_appointment/migrations/0042_alter_appointment_device_created_and_more.py +5 -13
  103. edc_appointment/migrations/0046_infosources.py +1 -3
  104. edc_appointment/migrations/0047_alter_appointment_options_and_more.py +1 -3
  105. edc_appointment/model_mixins/appointment_methods_model_mixin.py +1 -5
  106. edc_appointment/model_mixins/appointment_model_mixin.py +2 -8
  107. edc_appointment/model_mixins/next_appointment_crf_model_mixin.py +1 -3
  108. edc_appointment/modeladmin_mixins/next_appointment_crf_modeladmin_mixin.py +1 -3
  109. edc_appointment/modelform_mixins/next_appointment_crf_modelform_mixins.py +1 -5
  110. edc_appointment/models/signals.py +5 -17
  111. edc_appointment/utils.py +11 -33
  112. edc_appointment/view_mixins/appointment_view_mixin.py +2 -6
  113. edc_auth/admin/list_filters.py +2 -6
  114. edc_auth/admin/role_admin.py +1 -3
  115. edc_auth/admin/user_admin.py +4 -12
  116. edc_auth/admin/user_profile_admin.py +2 -5
  117. edc_auth/auth_updater/auth_updater.py +1 -3
  118. edc_auth/auth_updater/group_updater.py +3 -9
  119. edc_auth/forms.py +1 -3
  120. edc_auth/get_app_codenames.py +1 -3
  121. edc_auth/import_users.py +3 -9
  122. edc_auth/management/commands/export_users.py +1 -3
  123. edc_auth/management/commands/reset_password.py +1 -3
  124. edc_auth/migrations/0001_squashed_0033_alter_userprofile_is_multisite_viewer.py +4 -12
  125. edc_auth/migrations/0015_auto_20191026_2149.py +1 -3
  126. edc_auth/migrations/0016_auto_20191026_2153.py +1 -3
  127. edc_auth/migrations/0025_permissions.py +1 -1
  128. edc_auth/migrations/0029_alter_edcpermissions_device_created_and_more.py +5 -13
  129. edc_auth/models/__init__.py +1 -3
  130. edc_auth/models/signals.py +2 -6
  131. edc_auth/models/user_profile.py +1 -3
  132. edc_auth/password_setter.py +1 -3
  133. edc_auth/system_checks.py +1 -5
  134. edc_auth/urls_for_accounts.py +1 -3
  135. edc_auth/utils.py +3 -9
  136. edc_consent/actions.py +3 -9
  137. edc_consent/consent_definition.py +2 -6
  138. edc_consent/consent_definition_extension.py +4 -12
  139. edc_consent/field_mixins/citizen_fields_mixin.py +2 -4
  140. edc_consent/field_mixins/identity_fields_mixin.py +1 -2
  141. edc_consent/field_mixins/personal_fields_mixin.py +8 -3
  142. edc_consent/field_mixins/site_fields_mixin.py +1 -2
  143. edc_consent/form_validators/subject_consent_form_validator.py +2 -7
  144. edc_consent/migrations/0001_initial.py +1 -1
  145. edc_consent/migrations/0002_alter_edcpermissions_device_created_and_more.py +3 -7
  146. edc_consent/model_mixins/consent_extension_model_mixin.py +1 -3
  147. edc_consent/model_mixins/consent_model_mixin.py +3 -9
  148. edc_consent/modeladmin_mixins/consent_model_admin_mixin.py +7 -17
  149. edc_consent/modelform_mixins/consent_modelform_mixin/consent_modelform_validation_mixin.py +3 -8
  150. edc_consent/modelform_mixins/requires_consent_modelform_mixin.py +1 -3
  151. edc_consent/models/signals.py +2 -6
  152. edc_consent/site_consents.py +5 -17
  153. edc_consent/system_checks.py +3 -9
  154. edc_consent/validators.py +1 -2
  155. edc_consent/view_mixins/consent_view_mixins.py +3 -5
  156. edc_crf/crf_form_validator.py +2 -6
  157. edc_crf/crf_form_validator_mixins.py +2 -6
  158. edc_crf/migrations/0004_alter_crfstatus_device_created_and_more.py +3 -7
  159. edc_crf/utils.py +1 -3
  160. edc_dashboard/management/commands/update_search_slugs.py +1 -3
  161. edc_dashboard/migrations/0001_initial.py +1 -1
  162. edc_dashboard/migrations/0003_alter_edcpermissions_device_created_and_more.py +3 -7
  163. edc_dashboard/templatetags/edc_dashboard_extras.py +2 -6
  164. edc_dashboard/view_mixins/administration_view_mixin.py +1 -3
  165. edc_dashboard/view_mixins/edc_view_mixin.py +1 -3
  166. edc_dashboard/views/administration_view.py +1 -3
  167. edc_data_manager/action_items.py +1 -3
  168. edc_data_manager/admin/actions.py +3 -9
  169. edc_data_manager/admin/data_query_admin.py +4 -12
  170. edc_data_manager/admin/query_rule_admin.py +4 -13
  171. edc_data_manager/auths.py +1 -3
  172. edc_data_manager/forms/data_query.py +2 -6
  173. edc_data_manager/forms/query_rule.py +1 -3
  174. edc_data_manager/get_longitudinal_value.py +2 -5
  175. edc_data_manager/handlers/handlers.py +2 -6
  176. edc_data_manager/migrations/0001_initial.py +4 -3
  177. edc_data_manager/migrations/0003_auto_20190806_1749.py +2 -6
  178. edc_data_manager/migrations/0004_auto_20190806_1750.py +1 -3
  179. edc_data_manager/migrations/0025_edcpermissions.py +1 -1
  180. edc_data_manager/migrations/0027_alter_dataquery_dm_user.py +1 -1
  181. edc_data_manager/migrations/0028_alter_dataquery_options_alter_queryrule_options_and_more.py +2 -1
  182. edc_data_manager/migrations/0029_alter_dataquery_managers.py +2 -1
  183. edc_data_manager/migrations/0030_alter_datadictionary_device_created_and_more.py +15 -43
  184. edc_data_manager/models/model_mixins.py +1 -3
  185. edc_data_manager/populate_data_dictionary.py +1 -2
  186. edc_data_manager/post_migrate_signals.py +1 -3
  187. edc_data_manager/site_data_manager.py +1 -3
  188. edc_document_status/model_mixins.py +1 -3
  189. edc_egfr/__init__.py +1 -0
  190. edc_egfr/admin/__init__.py +1 -0
  191. edc_egfr/admin/egfr_drop_notification_admin_mixin.py +73 -0
  192. edc_egfr/apps.py +5 -0
  193. edc_egfr/calculators/__init__.py +4 -0
  194. edc_egfr/calculators/base_egrfr.py +56 -0
  195. edc_egfr/calculators/egfr_ckd_epi.py +68 -0
  196. edc_egfr/calculators/egfr_cockcroft_gault.py +63 -0
  197. edc_egfr/calculators/percent_change.py +7 -0
  198. edc_egfr/constants.py +1 -0
  199. edc_egfr/egfr.py +237 -0
  200. edc_egfr/form_validator_mixins/__init__.py +4 -0
  201. edc_egfr/form_validator_mixins/egfr_form_validator_mixins.py +55 -0
  202. edc_egfr/get_drop_notification_model.py +10 -0
  203. edc_egfr/get_egfr_for_subject.py +31 -0
  204. edc_egfr/model_mixins/__init__.py +2 -0
  205. edc_egfr/model_mixins/egfr_drop_notification_model_mixin.py +63 -0
  206. edc_egfr/model_mixins/egfr_model_mixin.py +120 -0
  207. edc_export/archive_exporter.py +2 -6
  208. edc_export/exportables.py +2 -6
  209. edc_export/files_emailer.py +1 -3
  210. edc_export/management/commands/import_receipts.py +1 -3
  211. edc_export/managers.py +3 -9
  212. edc_export/migrations/0001_initial.py +15 -36
  213. edc_export/migrations/0005_exportdata_importdata.py +1 -3
  214. edc_export/migrations/0006_auto_20200512_0208.py +2 -6
  215. edc_export/migrations/0010_auto_20210910_1636.py +2 -6
  216. edc_export/migrations/0013_edcpermissions.py +1 -1
  217. edc_export/migrations/0015_alter_datarequest_managers_and_more.py +2 -1
  218. edc_export/migrations/0016_alter_datarequest_device_created_and_more.py +27 -79
  219. edc_export/migrations/0017_alter_datarequest_options_and_more.py +2 -6
  220. edc_export/migrations/0020_remove_datarequesthistory_edc_export__exporte_ba8050_idx_and_more.py +2 -6
  221. edc_export/model_exporter/model_exporter.py +4 -15
  222. edc_export/model_exporter/object_history_helpers.py +1 -3
  223. edc_export/model_exporter/value_getter.py +5 -14
  224. edc_export/models/signals.py +1 -3
  225. edc_export/models/upload_export_receipt_file.py +1 -3
  226. edc_export/utils.py +1 -4
  227. edc_export/views/export_selected_models_view.py +6 -17
  228. edc_facility/default_definitions.py +1 -3
  229. edc_facility/facility.py +4 -14
  230. edc_facility/import_holidays.py +1 -3
  231. edc_facility/migrations/0005_healthfacility_healthfacilitytypes_and_more.py +4 -6
  232. edc_facility/migrations/0006_alter_healthfacility_health_facility_type.py +1 -1
  233. edc_facility/migrations/0008_alter_healthfacility_device_created_and_more.py +5 -13
  234. edc_facility/models/holiday.py +1 -3
  235. edc_facility/utils.py +1 -3
  236. edc_fieldsets/fieldsets_modeladmin_mixin.py +1 -3
  237. edc_form_describer/form_describer.py +3 -9
  238. edc_form_describer/make_forms_reference.py +1 -3
  239. edc_form_describer/management/commands/make_forms_reference.py +1 -3
  240. edc_form_runners/admin/issue_admin.py +2 -6
  241. edc_form_runners/form_runner.py +4 -13
  242. edc_form_runners/form_runner_by_scr_id.py +1 -3
  243. edc_form_runners/get_form_runner.py +1 -3
  244. edc_form_runners/get_form_runner_by_src_id.py +3 -3
  245. edc_form_runners/management/commands/run_form_runners.py +1 -3
  246. edc_form_runners/migrations/0001_initial.py +2 -4
  247. edc_form_runners/run_form_runners.py +1 -3
  248. edc_form_runners/utils.py +1 -3
  249. edc_form_validators/applicable_field_validator.py +6 -17
  250. edc_form_validators/base_form_validator.py +1 -3
  251. edc_form_validators/date_range_validator.py +4 -12
  252. edc_form_validators/date_validator.py +3 -9
  253. edc_form_validators/many_to_many_field_validator.py +1 -3
  254. edc_form_validators/other_specify_field_validator.py +3 -7
  255. edc_form_validators/range_field_validator.py +1 -3
  256. edc_form_validators/required_field_validator.py +5 -18
  257. edc_glucose/__init__.py +0 -0
  258. edc_glucose/apps.py +6 -0
  259. edc_glucose/constants.py +3 -0
  260. edc_glucose/fieldsets.py +14 -0
  261. edc_glucose/form_validators/__init__.py +6 -0
  262. edc_glucose/form_validators/fasting_form_validator.py +12 -0
  263. edc_glucose/form_validators/fbg_form_validator_mixin.py +32 -0
  264. edc_glucose/form_validators/fbg_ogtt_form_validator_mixin.py +47 -0
  265. edc_glucose/form_validators/glucose_form_validator.py +44 -0
  266. edc_glucose/form_validators/glucose_form_validator_mixin.py +53 -0
  267. edc_glucose/form_validators/ogtt_form_validator_mixin.py +91 -0
  268. edc_glucose/list_filters.py +42 -0
  269. edc_glucose/migrations/__init__.py +0 -0
  270. edc_glucose/model_mixin_factories/__init__.py +4 -0
  271. edc_glucose/model_mixin_factories/fasting_model_mixin_factory.py +63 -0
  272. edc_glucose/model_mixin_factories/fbg_model_mixin_factory.py +48 -0
  273. edc_glucose/model_mixin_factories/glucose_model_mixin_factory.py +49 -0
  274. edc_glucose/model_mixin_factories/ogtt_model_mixin_factory.py +71 -0
  275. edc_glucose/model_mixins/__init__.py +5 -0
  276. edc_glucose/model_mixins/fasting_model_mixin.py +15 -0
  277. edc_glucose/model_mixins/fbg_model_mixin.py +10 -0
  278. edc_glucose/model_mixins/glucose_model_mixin.py +17 -0
  279. edc_glucose/model_mixins/hba1c_model_mixin.py +42 -0
  280. edc_glucose/model_mixins/ogtt_model_mixin.py +10 -0
  281. edc_glucose/models.py +0 -0
  282. edc_glucose/utils.py +42 -0
  283. edc_identifier/admin_site.py +1 -3
  284. edc_identifier/identifier.py +1 -3
  285. edc_identifier/migrations/0001_initial.py +3 -4
  286. edc_identifier/migrations/0001_squashed_0018_auto_20180128_1054.py +3 -2
  287. edc_identifier/migrations/0005_alter_identifiermodel_managers.py +2 -1
  288. edc_identifier/migrations/0005_historicalidentifierhistory_historicalidentifiertracker_historicalsubjectidentifier.py +4 -5
  289. edc_identifier/migrations/0006_auto_20161127_2226.py +16 -43
  290. edc_identifier/migrations/0007_alter_identifiermodel_device_created_and_more.py +3 -7
  291. edc_identifier/migrations/0007_auto_20161204_2227.py +4 -7
  292. edc_identifier/migrations/0009_auto_20161221_2323.py +1 -0
  293. edc_identifier/migrations/0010_auto_20170112_0602.py +2 -1
  294. edc_identifier/migrations/0012_auto_20171116_1606.py +2 -1
  295. edc_identifier/migrations/0013_auto_20171230_1316.py +3 -9
  296. edc_identifier/research_identifier.py +3 -11
  297. edc_identifier/short_identifier.py +5 -9
  298. edc_identifier/utils.py +1 -3
  299. edc_lab/admin/modeladmin_mixins.py +2 -8
  300. edc_lab/aliquot_types.py +1 -3
  301. edc_lab/form_validators/requisition_form_validator_mixin.py +1 -3
  302. edc_lab/forms/box_type_form.py +4 -6
  303. edc_lab/lab/aliquot_type.py +2 -6
  304. edc_lab/lab/manifest.py +2 -6
  305. edc_lab/lab/primary_aliquot.py +1 -3
  306. edc_lab/lab/requisition_panel.py +1 -3
  307. edc_lab/lab/requisition_panel_group.py +2 -6
  308. edc_lab/lab/specimen.py +1 -3
  309. edc_lab/labels/aliquot_label.py +4 -6
  310. edc_lab/labels/manifest_label.py +1 -3
  311. edc_lab/migrations/0001_initial.py +12 -29
  312. edc_lab/migrations/0002_auto_20170305_1939.py +4 -12
  313. edc_lab/migrations/0007_auto_20170321_1119.py +2 -6
  314. edc_lab/migrations/0008_auto_20170921_0719.py +2 -1
  315. edc_lab/migrations/0010_auto_20171127_1541.py +3 -2
  316. edc_lab/migrations/0012_auto_20180114_1438.py +2 -1
  317. edc_lab/migrations/0013_auto_20180117_1438.py +2 -1
  318. edc_lab/migrations/0022_auto_20211210_1839.py +1 -0
  319. edc_lab/migrations/0024_alter_manifestitem_managers.py +2 -1
  320. edc_lab/migrations/0027_alter_aliquot_managers_alter_box_managers_and_more.py +1 -1
  321. edc_lab/migrations/0028_alter_aliquot_device_created_and_more.py +43 -127
  322. edc_lab/model_mixins/aliquot/aliquot_label_mixin.py +1 -3
  323. edc_lab/model_mixins/aliquot/aliquot_model_mixin.py +4 -12
  324. edc_lab/model_mixins/requisition/requisition_identifier_mixin.py +1 -3
  325. edc_lab/model_mixins/shipping/manifest_model_mixin.py +1 -3
  326. edc_lab/models/box_item.py +1 -3
  327. edc_lab/models/box_type.py +1 -3
  328. edc_lab/models/manifest/manifest.py +3 -9
  329. edc_lab/models/manifest/manifest_item.py +1 -3
  330. edc_lab/models/order.py +1 -3
  331. edc_lab/models/signals.py +1 -3
  332. edc_lab/patterns.py +1 -3
  333. edc_lab/pdf_reports/manifest_pdf_report.py +9 -27
  334. edc_lab/post_migrate_signals.py +1 -3
  335. edc_lab/site_labs.py +4 -10
  336. edc_lab_dashboard/migrations/0001_initial.py +1 -1
  337. edc_lab_dashboard/migrations/0002_alter_edcpermissions_device_created_and_more.py +3 -7
  338. edc_lab_dashboard/view_mixins/box_view_mixin.py +1 -3
  339. edc_lab_dashboard/view_mixins/manifest_view_mixin.py +4 -12
  340. edc_lab_dashboard/views/action_views/receive_view.py +1 -3
  341. edc_lab_dashboard/views/action_views/verify_box_item_view.py +1 -3
  342. edc_lab_dashboard/views/listboard_filters/aliquot_listboard_view_filters.py +2 -6
  343. edc_lab_dashboard/views/listboard_filters/manifest_listboard_filters.py +1 -3
  344. edc_lab_dashboard/views/listboard_views/base_box_item_listboard_view.py +1 -3
  345. edc_lab_dashboard/views/listboard_views/manifest_listboard_view.py +1 -3
  346. edc_lab_dashboard/views/listboard_views/process_listboard_view.py +2 -6
  347. edc_lab_dashboard/views/listboard_views/receive_listboard_view.py +2 -6
  348. edc_lab_dashboard/views/listboard_views/requisition_listboard_view.py +2 -6
  349. edc_lab_results/action_items.py +1 -3
  350. edc_lab_results/form_validator_mixins/blood_results_fbg_form_validator_mixin.py +2 -4
  351. edc_lab_results/form_validator_mixins/blood_results_form_validator_mixin.py +1 -3
  352. edc_lab_results/get_summary.py +3 -5
  353. edc_lab_results/model_mixin_factories/__init__.py +10 -0
  354. edc_lab_results/{model_mixin_factory → model_mixin_factories}/field_attrs.py +8 -8
  355. edc_lab_results/{model_mixin_factory → model_mixin_factories}/reportable_result_model_mixin_factory.py +2 -0
  356. edc_lab_results/{model_mixin_factory → model_mixin_factories}/result_model_mixin_factory.py +2 -0
  357. edc_lab_results/model_mixins/blood_result_model_mixin.py +2 -5
  358. edc_lab_results/model_mixins/electrolytes_model_mixins.py +1 -1
  359. edc_lab_results/model_mixins/fbc_model_mixins.py +1 -1
  360. edc_lab_results/model_mixins/fbg_model_mixin.py +6 -3
  361. edc_lab_results/model_mixins/glucose_model_mixin.py +2 -2
  362. edc_lab_results/model_mixins/hba1c_model_mixin.py +2 -28
  363. edc_lab_results/model_mixins/insulin_model_mixin.py +4 -11
  364. edc_lab_results/model_mixins/lft_model_mixins.py +1 -1
  365. edc_lab_results/model_mixins/lipid_model_mixins.py +1 -1
  366. edc_lab_results/model_mixins/proteinuria_model_mixin.py +1 -1
  367. edc_lab_results/model_mixins/rft_model_mixins.py +1 -1
  368. edc_label/apps.py +1 -2
  369. edc_label/migrations/0001_initial.py +1 -1
  370. edc_label/migrations/0003_alter_zpllabeltemplates_device_created_and_more.py +3 -7
  371. edc_label/printer.py +2 -6
  372. edc_label/printers_mixin.py +1 -3
  373. edc_label/urls.py +1 -3
  374. edc_label/view_mixins.py +1 -3
  375. edc_label/views/print_label_view.py +1 -3
  376. edc_list_data/model_mixins.py +1 -3
  377. edc_list_data/preload_data.py +2 -6
  378. edc_list_data/site_list_data.py +1 -3
  379. edc_listboard/migrations/0001_initial.py +1 -1
  380. edc_listboard/migrations/0003_alter_listboard_device_created_and_more.py +3 -7
  381. edc_listboard/view_mixins/listboard_filter_view_mixin.py +5 -15
  382. edc_listboard/view_mixins/search_listboard_view_mixin.py +2 -6
  383. edc_listboard/views/listboard_view.py +2 -6
  384. edc_listboard/views/screen/screening_listboard_view.py +1 -3
  385. edc_listboard/views/subject/subject_listboard_view.py +1 -3
  386. edc_locator/forms/subject_locator_form_validator.py +4 -12
  387. edc_locator/migrations/0001_initial.py +3 -2
  388. edc_locator/migrations/0003_auto_20180103_1351.py +2 -1
  389. edc_locator/migrations/0004_auto_20180106_2148.py +2 -1
  390. edc_locator/migrations/0007_auto_20180117_1819.py +2 -1
  391. edc_locator/migrations/0011_auto_20181007_0053.py +1 -1
  392. edc_locator/migrations/0013_auto_20181007_0054.py +2 -3
  393. edc_locator/migrations/0014_auto_20181009_0545.py +1 -0
  394. edc_locator/migrations/0032_alter_subjectlocator_managers.py +1 -1
  395. edc_locator/migrations/0034_alter_historicalsubjectlocator_device_created_and_more.py +5 -13
  396. edc_locator/modeladmin_mixins.py +1 -3
  397. edc_locator/view_mixins/subject_locator_view_mixins.py +1 -3
  398. edc_ltfu/admin.py +1 -3
  399. edc_ltfu/forms/ltfu_form.py +1 -3
  400. edc_ltfu/forms/ltfu_form_validator_mixin.py +1 -2
  401. edc_ltfu/modelform_mixins.py +3 -8
  402. edc_metadata/admin/modeladmin_mixins.py +2 -8
  403. edc_metadata/management/commands/validate_entry_status.py +1 -3
  404. edc_metadata/metadata/metadata.py +12 -41
  405. edc_metadata/metadata/metadata_getter.py +2 -9
  406. edc_metadata/metadata/requisition_metadata_getter.py +1 -3
  407. edc_metadata/metadata_handler.py +3 -9
  408. edc_metadata/metadata_helper/metadata_helper_mixin.py +1 -3
  409. edc_metadata/metadata_mixins/source_model_metadata_mixin.py +3 -9
  410. edc_metadata/metadata_refresher.py +3 -9
  411. edc_metadata/metadata_rules/crf/crf_rule_group.py +2 -5
  412. edc_metadata/metadata_rules/persistant_singleton_mixin.py +3 -3
  413. edc_metadata/metadata_rules/requisition/requisition_rule_group.py +1 -2
  414. edc_metadata/metadata_rules/rule_evaluator.py +1 -3
  415. edc_metadata/metadata_rules/rule_group.py +2 -6
  416. edc_metadata/metadata_rules/rule_group_meta_options.py +1 -3
  417. edc_metadata/metadata_updater.py +1 -3
  418. edc_metadata/metadata_wrappers/metadata_wrapper.py +1 -3
  419. edc_metadata/migrations/0001_initial.py +2 -1
  420. edc_metadata/migrations/0002_auto_20161127_2226.py +6 -13
  421. edc_metadata/migrations/0005_auto_20170112_0602.py +2 -1
  422. edc_metadata/migrations/0007_auto_20170810_1032.py +2 -1
  423. edc_metadata/migrations/0009_auto_20180116_1528.py +2 -1
  424. edc_metadata/migrations/0014_auto_20190707_0002.py +1 -1
  425. edc_metadata/migrations/0015_auto_20190709_0009.py +3 -5
  426. edc_metadata/migrations/0021_alter_crfmetadata_managers_and_more.py +1 -1
  427. edc_metadata/migrations/0023_alter_crfmetadata_device_created_and_more.py +5 -13
  428. edc_metadata/model_mixins/creates/creates_metadata_model_mixin.py +1 -3
  429. edc_metadata/model_mixins/updates/updates_metadata_model_mixin.py +1 -3
  430. edc_metadata/models/crf_metadata_model_mixin.py +2 -6
  431. edc_metadata/next_form_getter.py +1 -3
  432. edc_metadata/requisition/requisition_metadata_handler.py +3 -2
  433. edc_metadata/requisition/requisition_metadata_updater.py +1 -3
  434. edc_metadata/update_metadata_on_schedule_change.py +7 -14
  435. edc_model/models/fields/initials_field.py +1 -3
  436. edc_model/models/signals.py +1 -3
  437. edc_model/system_checks.py +1 -3
  438. edc_model/validators/duration.py +1 -3
  439. edc_model_admin/admin_site.py +1 -3
  440. edc_model_admin/changelist_buttons/model_admin_changelist_button_mixin.py +4 -12
  441. edc_model_admin/changelist_buttons/model_admin_changelist_model_button_mixin.py +1 -3
  442. edc_model_admin/dashboard/model_admin_crf_dashboard_mixin.py +1 -3
  443. edc_model_admin/dashboard/model_admin_dashboard_mixin.py +1 -3
  444. edc_model_admin/mixins/base_model_admin_redirect_mixin.py +2 -6
  445. edc_model_admin/mixins/inlines/limited_admin_inline_mixin.py +1 -3
  446. edc_model_admin/mixins/model_admin_bypass_default_form_cls_mixin.py +4 -12
  447. edc_model_admin/mixins/model_admin_form_auto_number_mixin.py +2 -6
  448. edc_model_admin/mixins/model_admin_form_instructions_mixin.py +2 -6
  449. edc_model_admin/mixins/model_admin_next_url_redirect_mixin.py +3 -9
  450. edc_model_admin/mixins/model_admin_protect_pii_mixin.py +1 -3
  451. edc_model_admin/mixins/model_admin_redirect_all_to_changelist_mixin.py +2 -6
  452. edc_model_admin/mixins/model_admin_redirect_on_delete_mixin.py +1 -3
  453. edc_model_admin/templatetags/edc_admin_modify.py +3 -9
  454. edc_model_fields/fields/initials_field.py +1 -3
  455. edc_model_form/mixins/inline_model_form_mixin.py +5 -9
  456. edc_model_to_dataframe/model_to_dataframe.py +15 -46
  457. edc_navbar/get_default_navbar.py +1 -3
  458. edc_navbar/migrations/0004_auto_20220825_0451.py +1 -1
  459. edc_navbar/migrations/0006_alter_edcpermissions_device_created_and_more.py +3 -7
  460. edc_navbar/navbar.py +1 -3
  461. edc_navbar/navbar_item.py +1 -3
  462. edc_navbar/site_navbars.py +2 -6
  463. edc_navbar/templatetags/edc_navbar_extras.py +1 -3
  464. edc_notification/admin_site.py +1 -3
  465. edc_notification/mailing_list_manager.py +5 -15
  466. edc_notification/migrations/0001_initial.py +2 -1
  467. edc_notification/migrations/0008_alter_notification_device_created_and_more.py +3 -7
  468. edc_notification/modeladmin_mixins.py +1 -3
  469. edc_notification/models/notification.py +1 -3
  470. edc_notification/models/signals.py +3 -10
  471. edc_notification/notification/model_notification.py +3 -9
  472. edc_notification/notification/notification.py +4 -12
  473. edc_notification/site_notifications.py +5 -14
  474. edc_offstudy/migrations/0001_initial.py +2 -1
  475. edc_offstudy/migrations/0002_auto_20180921_0434.py +4 -3
  476. edc_offstudy/migrations/0008_auto_20191102_0033.py +2 -1
  477. edc_offstudy/migrations/0015_auto_20220925_0032.py +1 -1
  478. edc_offstudy/migrations/0016_auto_20220929_1742.py +1 -0
  479. edc_offstudy/migrations/0018_alter_subjectoffstudy_managers.py +2 -1
  480. edc_offstudy/migrations/0019_alter_historicalsubjectoffstudy_device_created_and_more.py +5 -13
  481. edc_offstudy/model_mixins/offstudy_model_mixin.py +3 -3
  482. edc_offstudy/modelform_mixins/crf/offstudy_crf_modelform_mixin.py +2 -6
  483. edc_offstudy/templatetags/edc_offstudy_extras.py +2 -6
  484. edc_offstudy/utils.py +1 -3
  485. edc_pdf_reports/admin/modeladmin_mixins.py +1 -3
  486. edc_pdf_reports/crf_pdf_report.py +3 -9
  487. edc_pdf_reports/flowables/textbox.py +1 -3
  488. edc_pdf_reports/report.py +6 -18
  489. edc_pdf_reports/utils.py +1 -3
  490. edc_pdf_reports/views/pdf_intermediate_view.py +1 -3
  491. edc_pdf_reports/views/print_pdf_report_view.py +2 -6
  492. edc_pdutils/actions.py +4 -12
  493. edc_pdutils/choices.py +1 -4
  494. edc_pdutils/database.py +1 -3
  495. edc_pdutils/df_exporters/csv_crf_inline_tables_exporter.py +4 -12
  496. edc_pdutils/df_exporters/csv_exporter.py +7 -22
  497. edc_pdutils/df_handlers/crf_df_handler.py +3 -9
  498. edc_pdutils/df_handlers/df_handler.py +1 -3
  499. edc_pdutils/df_handlers/registered_subject_df_handler.py +1 -3
  500. edc_pdutils/management/commands/export_models.py +2 -6
  501. edc_pdutils/migrations/0001_initial.py +6 -9
  502. edc_pdutils/site.py +2 -6
  503. edc_pdutils/site_values_mappings.py +3 -9
  504. edc_pdutils/tables/aliquot.py +2 -9
  505. edc_pdutils/tables/consent.py +2 -6
  506. edc_pdutils/tables/crf.py +4 -12
  507. edc_pdutils/tables/requisition.py +4 -12
  508. edc_pdutils/tables/visit.py +1 -3
  509. edc_pdutils/utils/convert_dates_from_model.py +3 -9
  510. edc_pdutils/utils/convert_numerics_from_model.py +1 -3
  511. edc_pdutils/utils/convert_timedelta_from_model.py +1 -3
  512. edc_pdutils/utils/missing_subject_identifiers.py +1 -3
  513. edc_pharmacy/admin/actions/confirm_stock.py +2 -6
  514. edc_pharmacy/admin/actions/delete_order_items.py +1 -3
  515. edc_pharmacy/admin/actions/delete_receive_items.py +1 -3
  516. edc_pharmacy/admin/actions/print_stock_report.py +1 -3
  517. edc_pharmacy/admin/list_filters.py +5 -17
  518. edc_pharmacy/admin/model_admin_mixin.py +1 -3
  519. edc_pharmacy/admin/prescription/rx_admin.py +2 -6
  520. edc_pharmacy/admin/prescription/rx_refill_admin.py +1 -3
  521. edc_pharmacy/admin/reports/stock_availability_admin.py +1 -5
  522. edc_pharmacy/admin/stock/allocation_admin.py +5 -15
  523. edc_pharmacy/admin/stock/allocation_proxy_admin.py +1 -3
  524. edc_pharmacy/admin/stock/confirmation_admin.py +1 -3
  525. edc_pharmacy/admin/stock/confirmation_at_site_admin.py +4 -12
  526. edc_pharmacy/admin/stock/confirmation_at_site_item_admin.py +5 -17
  527. edc_pharmacy/admin/stock/dispense_admin.py +3 -11
  528. edc_pharmacy/admin/stock/dispense_item_admin.py +4 -14
  529. edc_pharmacy/admin/stock/order_admin.py +1 -3
  530. edc_pharmacy/admin/stock/order_item_admin.py +5 -15
  531. edc_pharmacy/admin/stock/receive_admin.py +4 -12
  532. edc_pharmacy/admin/stock/receive_item_admin.py +4 -12
  533. edc_pharmacy/admin/stock/repack_request_admin.py +2 -6
  534. edc_pharmacy/admin/stock/stock_adjustment_admin.py +1 -3
  535. edc_pharmacy/admin/stock/stock_admin.py +8 -24
  536. edc_pharmacy/admin/stock/stock_proxy_admin.py +1 -5
  537. edc_pharmacy/admin/stock/stock_request_item_admin.py +5 -15
  538. edc_pharmacy/admin/stock/stock_transfer_admin.py +4 -12
  539. edc_pharmacy/admin/stock/stock_transfer_item_admin.py +6 -18
  540. edc_pharmacy/admin/stock/storage_bin_admin.py +3 -11
  541. edc_pharmacy/admin/stock/storage_bin_item_admin.py +4 -14
  542. edc_pharmacy/analytics/dataframes/get_next_scheduled_visit_for_subjects_df.py +3 -9
  543. edc_pharmacy/analytics/dataframes/in_stock_for_subjects_df.py +2 -6
  544. edc_pharmacy/analytics/dataframes/stock_for_subjects.py +1 -3
  545. edc_pharmacy/form_validators/crf/study_medication_form_validator.py +9 -27
  546. edc_pharmacy/forms/stock/container_form.py +2 -6
  547. edc_pharmacy/forms/stock/receive_item_form.py +2 -6
  548. edc_pharmacy/forms/stock/repack_request_form.py +4 -11
  549. edc_pharmacy/forms/stock/stock_request_form.py +5 -14
  550. edc_pharmacy/forms/stock/stock_request_item_form.py +1 -3
  551. edc_pharmacy/labels/draw_bulk_stock_label_code128.py +1 -3
  552. edc_pharmacy/labels/draw_bulk_stock_label_code39.py +3 -9
  553. edc_pharmacy/labels/draw_patient_stock_label_code128.py +1 -3
  554. edc_pharmacy/migrations/0001_initial.py +7 -15
  555. edc_pharmacy/migrations/0005_alter_rx_managers.py +2 -1
  556. edc_pharmacy/migrations/0015_auto_20220913_2139.py +9 -22
  557. edc_pharmacy/migrations/0016_auto_20220929_1742.py +2 -1
  558. edc_pharmacy/migrations/0018_alter_rxrefill_managers.py +1 -1
  559. edc_pharmacy/migrations/0020_alter_box_device_created_alter_box_device_modified_and_more.py +71 -211
  560. edc_pharmacy/migrations/0021_alter_box_options_alter_container_options_and_more.py +1 -1
  561. edc_pharmacy/migrations/0023_remove_rx_edc_pharmac_modifie_986021_idx_and_more.py +1 -3
  562. edc_pharmacy/migrations/0024_allocation_assignment_containerunits_dispense_and_more.py +40 -104
  563. edc_pharmacy/migrations/0031_historicalrepackrequest_task_id_and_more.py +2 -1
  564. edc_pharmacy/migrations/0033_container_display_name_and_more.py +1 -3
  565. edc_pharmacy/migrations/0035_container_max_per_subject_and_more.py +2 -6
  566. edc_pharmacy/migrations/0037_remove_historicalstock_confirmed_at_site_by_and_more.py +2 -6
  567. edc_pharmacy/migrations/0039_remove_dispense_registered_subject_and_more.py +7 -9
  568. edc_pharmacy/migrations/0043_stockproxy_alter_historicallot_lot_no_and_more.py +2 -1
  569. edc_pharmacy/migrations/0049_remove_stocktransferconfirmation_stock_and_more.py +5 -13
  570. edc_pharmacy/migrations/0050_remove_stocktransferconfirmation2_location_and_more.py +2 -6
  571. edc_pharmacy/migrations/0051_alter_historicalstocktransferconfirmationitem_options_and_more.py +2 -1
  572. edc_pharmacy/migrations/0053_alter_location_managers_alter_historicalstock_lot_and_more.py +7 -11
  573. edc_pharmacy/migrations/0057_scanduplicates.py +3 -4
  574. edc_pharmacy/migrations/0058_stockrequestproxy_alter_stockproxy_options.py +2 -1
  575. edc_pharmacy/migrations/0060_alter_container_max_per_subject_and_more.py +8 -14
  576. edc_pharmacy/migrations/0061_alter_historicalstocktransferconfirmation_options_and_more.py +1 -1
  577. edc_pharmacy/migrations/0062_auto_20250312_1433.py +2 -6
  578. edc_pharmacy/migrations/0063_alter_allocation_managers_remove_allocation_site_and_more.py +2 -1
  579. edc_pharmacy/migrations/0065_allocationproxy.py +2 -1
  580. edc_pharmacy/migrations/0068_stockout.py +2 -1
  581. edc_pharmacy/migrations/0076_historicalstockadjustment_stockadjustment.py +5 -8
  582. edc_pharmacy/migrations/0077_historicalstockadjustment_adjustment_datetime_and_more.py +2 -1
  583. edc_pharmacy/migrations/0078_alter_historicalstock_qty_and_more.py +2 -1
  584. edc_pharmacy/migrations/0081_historicalconfirmation_confirmation.py +8 -10
  585. edc_pharmacy/migrations/0084_confirmationatsiteitem_and_more.py +2 -2
  586. edc_pharmacy/model_mixins/study_medication_crf_model_mixin.py +3 -9
  587. edc_pharmacy/models/medication/dosage_guideline.py +1 -3
  588. edc_pharmacy/models/medication/formulation.py +1 -3
  589. edc_pharmacy/models/prescription/rx.py +1 -3
  590. edc_pharmacy/models/prescription/rx_refill.py +2 -6
  591. edc_pharmacy/models/signals.py +11 -21
  592. edc_pharmacy/models/stock/allocation.py +3 -9
  593. edc_pharmacy/models/stock/confirmation.py +1 -3
  594. edc_pharmacy/models/stock/confirmation_at_site_item.py +1 -3
  595. edc_pharmacy/models/stock/container.py +1 -3
  596. edc_pharmacy/models/stock/dispense.py +1 -3
  597. edc_pharmacy/models/stock/dispense_item.py +1 -3
  598. edc_pharmacy/models/stock/lot.py +1 -3
  599. edc_pharmacy/models/stock/order_item.py +2 -6
  600. edc_pharmacy/models/stock/product.py +2 -6
  601. edc_pharmacy/models/stock/receive_item.py +4 -12
  602. edc_pharmacy/models/stock/repack_request.py +1 -3
  603. edc_pharmacy/models/stock/stock.py +3 -8
  604. edc_pharmacy/models/stock/stock_request_item.py +4 -4
  605. edc_pharmacy/models/stock/stock_transfer_item.py +1 -3
  606. edc_pharmacy/models/stock/supplier.py +1 -3
  607. edc_pharmacy/models/storage/utils.py +1 -4
  608. edc_pharmacy/pdf_reports/manifest_pdf_report.py +3 -9
  609. edc_pharmacy/pdf_reports/stock_pdf_report.py +3 -9
  610. edc_pharmacy/refill/adjust_previous_end_datetime.py +2 -6
  611. edc_pharmacy/refill/create_next_refill.py +1 -3
  612. edc_pharmacy/refill/create_refill.py +1 -3
  613. edc_pharmacy/refill/refill_creator.py +2 -6
  614. edc_pharmacy/sample_usb_printing/network_printers.py +1 -3
  615. edc_pharmacy/settings.py +3 -9
  616. edc_pharmacy/urls.py +1 -3
  617. edc_pharmacy/utils/allocate_stock.py +1 -3
  618. edc_pharmacy/utils/confirm_stock_at_site.py +3 -5
  619. edc_pharmacy/utils/dispense.py +1 -4
  620. edc_pharmacy/utils/get_unit_qty_out.py +1 -3
  621. edc_pharmacy/utils/process_repack_request.py +1 -3
  622. edc_pharmacy/utils/process_repack_request_queryset.py +1 -3
  623. edc_pharmacy/utils/stock_request/bulk_create_stock_request_items.py +2 -6
  624. edc_pharmacy/utils/stock_request/get_instock_and_nostock_data.py +3 -8
  625. edc_pharmacy/utils/transfer_stock.py +1 -3
  626. edc_pharmacy/utils/update_previous_refill_end_datetime.py +1 -3
  627. edc_pharmacy/views/add_to_storage_bin_view.py +2 -6
  628. edc_pharmacy/views/allocate_to_subject_view.py +7 -21
  629. edc_pharmacy/views/confirm_stock_from_instance_view.py +2 -6
  630. edc_pharmacy/views/confirm_stock_from_queryset_view.py +2 -7
  631. edc_pharmacy/views/confirmation_at_site_view.py +10 -31
  632. edc_pharmacy/views/dispense_view.py +2 -6
  633. edc_pharmacy/views/move_to_storage_bin_view.py +2 -6
  634. edc_pharmacy/views/prepare_and_review_stock_request_view.py +3 -9
  635. edc_pharmacy/views/print_labels_view.py +1 -3
  636. edc_pharmacy/views/print_stock_transfer_manifest_view.py +1 -3
  637. edc_pharmacy/views/transfer_stock_view.py +1 -3
  638. edc_prn/modelform_mixins.py +1 -3
  639. edc_prn/prn.py +2 -6
  640. edc_prn/templatetags/edc_prn_extras.py +4 -8
  641. edc_protocol/research_protocol_config.py +2 -5
  642. edc_protocol_incident/admin/protocol_deviation_violation_admin.py +1 -3
  643. edc_protocol_incident/auth_objects.py +1 -3
  644. edc_protocol_incident/auths.py +1 -3
  645. edc_protocol_incident/form_validators/mixins.py +3 -9
  646. edc_protocol_incident/form_validators/protocol_deviation_violation_form_validator.py +6 -18
  647. edc_protocol_incident/form_validators/protocol_incident_form_validator.py +3 -8
  648. edc_protocol_incident/migrations/0001_initial.py +4 -3
  649. edc_protocol_incident/migrations/0001_squashed_0015_auto_20220927_0401.py +7 -12
  650. edc_protocol_incident/migrations/0005_protocolincident_historicalprotocolincident_and_more.py +4 -3
  651. edc_protocol_incident/migrations/0012_auto_20220913_2139.py +3 -9
  652. edc_protocol_incident/migrations/0020_alter_historicalprotocoldeviationviolation_device_created_and_more.py +9 -25
  653. edc_protocol_incident/model_mixins/protocol_deviation_violation_model_mixin.py +3 -7
  654. edc_protocol_incident/model_mixins/protocol_incident_model_mixin.py +1 -3
  655. edc_protocol_incident/urls.py +1 -3
  656. edc_pylabels/actions.py +2 -6
  657. edc_pylabels/admin/label_configuration_admin.py +4 -4
  658. edc_pylabels/drawing_callable_example.py +1 -3
  659. edc_pylabels/migrations/0001_initial.py +1 -3
  660. edc_pylabels/migrations/0002_alter_label_options_label_created_and_more.py +2 -6
  661. edc_pylabels/migrations/0005_labelconfiguration_delete_label_and_more.py +1 -3
  662. edc_pylabels/models/label_configuration.py +1 -3
  663. edc_qareports/migrations/0001_initial.py +3 -4
  664. edc_qareports/migrations/0005_edcpermissions.py +2 -4
  665. edc_qareports/migrations/0006_qareportlog.py +2 -1
  666. edc_qareports/migrations/0007_qareportlog_edc_qarepor_accesse_738ffe_idx.py +1 -3
  667. edc_qareports/migrations/0017_auto_20240816_0256.py +1 -0
  668. edc_qareports/model_mixins/note_model_mixin.py +1 -3
  669. edc_qareports/modeladmin_mixins/list_filters.py +8 -12
  670. edc_qareports/modeladmin_mixins/note_modeladmin_mixin.py +1 -3
  671. edc_qareports/modeladmin_mixins/on_study_missing_values_modeladmin_mixin.py +2 -6
  672. edc_qareports/modeladmin_mixins/qa_report_modeladmin_mixin.py +1 -3
  673. edc_qareports/sql_generator/crf_case.py +1 -5
  674. edc_qareports/sql_generator/sql_view_generator.py +1 -3
  675. edc_qareports/utils.py +2 -6
  676. edc_randomization/admin.py +1 -3
  677. edc_randomization/auths.py +2 -6
  678. edc_randomization/blinding.py +1 -3
  679. edc_randomization/migrations/0001_initial.py +3 -4
  680. edc_randomization/migrations/0009_edcpermissions.py +1 -1
  681. edc_randomization/migrations/0011_alter_edcpermissions_device_created_and_more.py +7 -19
  682. edc_randomization/model_mixins.py +2 -5
  683. edc_randomization/randomization_list_importer.py +3 -7
  684. edc_randomization/randomization_list_verifier.py +2 -7
  685. edc_randomization/randomizer.py +2 -6
  686. edc_randomization/site_randomizers.py +1 -3
  687. edc_randomization/system_checks.py +1 -3
  688. edc_randomization/utils.py +2 -6
  689. edc_refusal/admin.py +1 -3
  690. edc_refusal/forms.py +1 -2
  691. edc_refusal/migrations/0001_initial.py +2 -1
  692. edc_refusal/migrations/0002_historicalsubjectrefusal.py +6 -4
  693. edc_refusal/migrations/0004_refusalreasons_plural_name.py +1 -3
  694. edc_refusal/migrations/0005_alter_subjectrefusal_options_and_more.py +2 -1
  695. edc_refusal/migrations/0006_alter_subjectrefusal_managers.py +2 -1
  696. edc_refusal/migrations/0008_alter_historicalsubjectrefusal_device_created_and_more.py +5 -13
  697. edc_registration/admin_site.py +1 -3
  698. edc_registration/migrations/0001_initial.py +3 -4
  699. edc_registration/migrations/0002_auto_20161127_2226.py +4 -7
  700. edc_registration/migrations/0004_auto_20161221_0018.py +2 -1
  701. edc_registration/migrations/0005_auto_20170111_1809.py +2 -1
  702. edc_registration/migrations/0008_auto_20170810_1032.py +2 -1
  703. edc_registration/migrations/0012_auto_20180116_1528.py +2 -1
  704. edc_registration/migrations/0015_auto_20181006_2257.py +1 -1
  705. edc_registration/migrations/0016_historicalregisteredsubject.py +5 -6
  706. edc_registration/migrations/0026_historicalregisteredsubject_familiar_name_and_more.py +1 -1
  707. edc_registration/migrations/0028_alter_registeredsubject_managers.py +1 -1
  708. edc_registration/migrations/0029_alter_historicalregisteredsubject_device_created_and_more.py +5 -13
  709. edc_registration/modeladmin_mixins.py +1 -3
  710. edc_registration/models/registered_subject.py +4 -11
  711. edc_registration/utils.py +1 -3
  712. edc_reportable/admin_site.py +1 -3
  713. edc_reportable/data/normal_data/africa.py +4 -14
  714. edc_reportable/evaluator.py +2 -6
  715. edc_reportable/formula.py +2 -6
  716. edc_reportable/management/commands/export_reportables.py +1 -3
  717. edc_reportable/migrations/0001_initial.py +3 -9
  718. edc_reportable/migrations/0003_referencerangecollection_grade1_and_more.py +3 -9
  719. edc_reportable/migrations/0004_alter_referencerangecollection_grade3_and_more.py +4 -7
  720. edc_reportable/migrations/0006_alter_gradingdata_revision_and_more.py +8 -19
  721. edc_reportable/models/mw.py +1 -3
  722. edc_reportable/models/reference_model_mixins.py +1 -3
  723. edc_reportable/models/reference_range_collection.py +3 -9
  724. edc_reportable/post_migrate_signals.py +1 -3
  725. edc_reportable/reference_range_evaluator.py +4 -11
  726. edc_reportable/utils/convert_units.py +1 -3
  727. edc_reportable/utils/get_grade_for_value.py +3 -1
  728. edc_reportable/utils/get_reference_range_collection.py +2 -2
  729. edc_reportable/utils/load_data.py +1 -3
  730. edc_reportable/utils/update_grading_data.py +2 -6
  731. edc_review_dashboard/migrations/0001_initial.py +1 -1
  732. edc_review_dashboard/migrations/0003_alter_edcpermissions_device_created_and_more.py +3 -7
  733. edc_review_dashboard/views/subject_review_listboard_view.py +1 -3
  734. edc_screening/eligibility.py +1 -3
  735. edc_screening/fc.py +1 -3
  736. edc_screening/migrations/0001_initial.py +1 -1
  737. edc_screening/migrations/0002_alter_edcpermissions_device_created_and_more.py +3 -7
  738. edc_screening/model_mixins/eligibility_model_mixin.py +1 -3
  739. edc_screening/model_mixins/screening_fields_model_mixin.py +2 -0
  740. edc_screening/modelform_mixins.py +1 -3
  741. edc_search/search_slug.py +2 -6
  742. edc_search/updater.py +2 -5
  743. edc_sites/admin/site_model_admin_mixin.py +4 -12
  744. edc_sites/management/commands/sync_sites.py +1 -3
  745. edc_sites/migrations/0007_edcpermissions.py +2 -4
  746. edc_sites/single_site/get_languages.py +1 -3
  747. edc_sites/site.py +4 -11
  748. edc_sites/system_checks.py +1 -4
  749. edc_sites/utils/add_or_update_django_sites.py +1 -3
  750. edc_subject_dashboard/migrations/0001_initial.py +1 -1
  751. edc_subject_dashboard/migrations/0002_alter_edcpermissions_device_created_and_more.py +3 -7
  752. edc_subject_dashboard/requisition_labels.py +1 -3
  753. edc_subject_dashboard/requisition_report.py +5 -15
  754. edc_subject_dashboard/requisition_verifier.py +2 -7
  755. edc_subject_dashboard/templatetags/edc_subject_dashboard_extras.py +2 -6
  756. edc_subject_dashboard/view_mixins/subject_visit_view_mixin.py +1 -2
  757. edc_subject_dashboard/view_utils/crf_button.py +1 -3
  758. edc_subject_dashboard/view_utils/subject_consent_listboard_button.py +1 -3
  759. edc_subject_dashboard/view_utils/timepoint_status_button.py +1 -3
  760. edc_subject_dashboard/views/requisition_print_actions_view.py +4 -12
  761. edc_subject_dashboard/views/requisition_verify_actions_view.py +1 -3
  762. edc_subject_dashboard/views/subject_dashboard_view.py +1 -3
  763. edc_timepoint/apps.py +1 -3
  764. edc_timepoint/timepoint.py +1 -3
  765. edc_timepoint/timepoint_lookup.py +1 -3
  766. edc_transfer/form_validators.py +4 -6
  767. edc_transfer/model_mixins.py +1 -3
  768. edc_transfer/modelform_mixins.py +1 -3
  769. edc_unblinding/action_items.py +1 -3
  770. edc_unblinding/admin_site.py +1 -3
  771. edc_unblinding/migrations/0001_initial.py +6 -4
  772. edc_unblinding/migrations/0002_auto_20210908_2318.py +1 -1
  773. edc_unblinding/migrations/0009_alter_unblindingrequest_managers_and_more.py +2 -1
  774. edc_unblinding/migrations/0010_alter_historicalunblindingrequest_device_created_and_more.py +9 -25
  775. edc_unblinding/models/unblinding_request.py +1 -3
  776. edc_unblinding/models/unblinding_review.py +1 -3
  777. edc_utils/age.py +1 -3
  778. edc_utils/date.py +1 -3
  779. edc_utils/paths_for_urlpatterns.py +1 -3
  780. edc_utils/show_urls.py +1 -3
  781. edc_utils/text.py +1 -2
  782. edc_view_utils/model_button.py +5 -13
  783. edc_view_utils/query_button.py +1 -3
  784. edc_visit_schedule/admin/subject_schedule_history_admin.py +1 -3
  785. edc_visit_schedule/baseline.py +1 -3
  786. edc_visit_schedule/migrations/0001_initial.py +3 -4
  787. edc_visit_schedule/migrations/0003_historicalvisitschedule_visitschedule.py +1 -3
  788. edc_visit_schedule/migrations/0004_auto_20190629_1800.py +1 -3
  789. edc_visit_schedule/migrations/0011_alter_historicalvisitschedule_device_created_and_more.py +7 -19
  790. edc_visit_schedule/migrations/0012_alter_subjectschedulehistory_managers_and_more.py +2 -1
  791. edc_visit_schedule/migrations/0015_historicalonschedule_offschedule_onschedule.py +9 -13
  792. edc_visit_schedule/migrations/0017_alter_onschedule_managers.py +2 -1
  793. edc_visit_schedule/model_mixins/crf/crf_schedule_model_mixin.py +1 -1
  794. edc_visit_schedule/model_mixins/off_schedule_model_mixin.py +2 -6
  795. edc_visit_schedule/model_mixins/on_schedule_model_mixin.py +1 -3
  796. edc_visit_schedule/modelform_mixins/off_schedule_modelform_mixin.py +1 -3
  797. edc_visit_schedule/models/subject_schedule_history.py +3 -8
  798. edc_visit_schedule/ordered_collection.py +1 -3
  799. edc_visit_schedule/schedule/schedule.py +6 -17
  800. edc_visit_schedule/simple_model_validator.py +3 -8
  801. edc_visit_schedule/site_visit_schedules.py +5 -15
  802. edc_visit_schedule/subject_schedule.py +4 -16
  803. edc_visit_schedule/system_checks.py +1 -3
  804. edc_visit_schedule/utils.py +8 -17
  805. edc_visit_schedule/view_mixins.py +4 -10
  806. edc_visit_schedule/visit/crf.py +1 -2
  807. edc_visit_schedule/visit/requisition.py +1 -3
  808. edc_visit_schedule/visit/visit.py +6 -16
  809. edc_visit_schedule/visit/window_period.py +3 -3
  810. edc_visit_schedule/visit_schedule/visit_schedule.py +2 -5
  811. edc_visit_tracking/crf_date_validator.py +1 -2
  812. edc_visit_tracking/form_validators/visit_form_validator.py +2 -8
  813. edc_visit_tracking/form_validators/visit_missed_form_validator.py +3 -9
  814. edc_visit_tracking/migrations/0003_auto_20220913_2139.py +2 -6
  815. edc_visit_tracking/migrations/0004_subjectvisit_subjectvisitmissedreasons_extra_value_and_more.py +8 -16
  816. edc_visit_tracking/model_mixins/base/visit_methods_model_mixin.py +2 -6
  817. edc_visit_tracking/model_mixins/crfs/visit_tracking_crf_model_mixin.py +1 -3
  818. edc_visit_tracking/model_mixins/requisitions/visit_tracking_requisition_model_mixin.py +1 -3
  819. edc_visit_tracking/model_mixins/subject_visit_missed_model_mixin.py +1 -3
  820. edc_visit_tracking/model_mixins/visit_model_mixin/visit_model_fields_mixin.py +1 -2
  821. edc_visit_tracking/modeladmin_mixins/crf_model_admin_mixin.py +4 -8
  822. edc_visit_tracking/modeladmin_mixins/visit_model_admin_mixin.py +4 -6
  823. edc_visit_tracking/modelform_mixins/crf/visit_tracking_crf_modelform_mixin.py +2 -6
  824. edc_visit_tracking/modelform_mixins/utils.py +1 -3
  825. edc_visit_tracking/modelform_mixins/visit_tracking_modelform_mixin.py +1 -2
  826. edc_visit_tracking/models/signals.py +1 -3
  827. edc_visit_tracking/stubs.py +1 -3
  828. edc_visit_tracking/utils.py +1 -2
  829. edc_visit_tracking/view_utils/related_visit_button.py +1 -3
  830. edc_visit_tracking/visit_sequence.py +1 -3
  831. edc_vitals/__init__.py +2 -0
  832. edc_vitals/apps.py +6 -0
  833. edc_vitals/calculators/__init__.py +1 -0
  834. edc_vitals/calculators/bmi.py +70 -0
  835. edc_vitals/form_validators/__init__.py +5 -0
  836. edc_vitals/form_validators/blood_pressure_form_validator_mixin.py +40 -0
  837. edc_vitals/form_validators/bmi_form_validator_mixin.py +19 -0
  838. edc_vitals/form_validators/weight_height_with_bmi_form_validator_mixin.py +13 -0
  839. edc_vitals/migrations/__init__.py +0 -0
  840. edc_vitals/model_mixins/__init__.py +5 -0
  841. edc_vitals/model_mixins/blood_pressure_model_mixin.py +80 -0
  842. edc_vitals/model_mixins/weight_height_bmi_model_mixin.py +42 -0
  843. edc_vitals/models/__init__.py +10 -0
  844. edc_vitals/models/fields/__init__.py +7 -0
  845. edc_vitals/models/fields/blood_pressure.py +36 -0
  846. edc_vitals/models/fields/heart_rate.py +22 -0
  847. edc_vitals/models/fields/height.py +26 -0
  848. edc_vitals/models/fields/respiratory_rate.py +22 -0
  849. edc_vitals/models/fields/temperature.py +26 -0
  850. edc_vitals/models/fields/waist_circumference.py +23 -0
  851. edc_vitals/models/fields/weight.py +26 -0
  852. edc_vitals/utils.py +51 -0
  853. edc_vitals/validators.py +5 -0
  854. edc_lab_results/model_mixin_factory/__init__.py +0 -2
  855. {clinicedc-2.0.1.dist-info → clinicedc-2.0.3.dist-info}/licenses/LICENSE +0 -0
@@ -38,9 +38,7 @@ class ConfirmationAtSiteView(
38
38
 
39
39
  def get_context_data(self, **kwargs):
40
40
  extra_opts = {}
41
- stock_transfer = self.get_stock_transfer(
42
- self.kwargs.get("stock_transfer_identifier")
43
- )
41
+ stock_transfer = self.get_stock_transfer(self.kwargs.get("stock_transfer_identifier"))
44
42
  if not self.kwargs.get("session_uuid"):
45
43
  self.session_uuid = str(uuid4())
46
44
  session_obj = None
@@ -59,14 +57,9 @@ class ConfirmationAtSiteView(
59
57
  if session_obj:
60
58
  last_codes = [(x, "confirmed") for x in session_obj.get("confirmed") or []]
61
59
  last_codes.extend(
62
- [
63
- (x, "already confirmed")
64
- for x in session_obj.get("already_confirmed") or []
65
- ]
66
- )
67
- last_codes.extend(
68
- [(x, "invalid") for x in session_obj.get("invalid") or []]
60
+ [(x, "already confirmed") for x in session_obj.get("already_confirmed") or []]
69
61
  )
62
+ last_codes.extend([(x, "invalid") for x in session_obj.get("invalid") or []])
70
63
  unconfirmed_count = self.get_unconfirmed_count(stock_transfer)
71
64
  extra_opts.update(
72
65
  item_count=list(
@@ -97,9 +90,7 @@ class ConfirmationAtSiteView(
97
90
  to_location__site=self.site,
98
91
  stocktransferitem__stock__confirmationatsiteitem__isnull=True,
99
92
  )
100
- return qs.annotate(count=Count("transfer_identifier")).order_by(
101
- "-transfer_datetime"
102
- )
93
+ return qs.annotate(count=Count("transfer_identifier")).order_by("-transfer_datetime")
103
94
 
104
95
  def get_adjusted_unconfirmed_count(self, stock_transfer):
105
96
  unconfirmed_count = self.get_unconfirmed_count(stock_transfer)
@@ -137,9 +128,7 @@ class ConfirmationAtSiteView(
137
128
 
138
129
  @property
139
130
  def location_id(self) -> uuid.UUID | None:
140
- location_id = self.kwargs.get("location_id") or self.request.POST.get(
141
- "location_id"
142
- )
131
+ location_id = self.kwargs.get("location_id") or self.request.POST.get("location_id")
143
132
  if not location_id and self.site:
144
133
  try:
145
134
  location = Location.objects.get(site=self.site)
@@ -168,9 +157,7 @@ class ConfirmationAtSiteView(
168
157
  def confirmation_at_site(self):
169
158
  confirmation_at_site_id = self.kwargs.get("confirmation_at_site")
170
159
  try:
171
- confirmation_at_site = ConfirmationAtSite.objects.get(
172
- id=confirmation_at_site_id
173
- )
160
+ confirmation_at_site = ConfirmationAtSite.objects.get(id=confirmation_at_site_id)
174
161
  except ObjectDoesNotExist:
175
162
  confirmation_at_site = None
176
163
  messages.add_message(
@@ -181,12 +168,8 @@ class ConfirmationAtSiteView(
181
168
  @property
182
169
  def confirmation_at_site_changelist_url(self) -> str:
183
170
  if self.confirmation_at_site:
184
- url = reverse(
185
- "edc_pharmacy_admin:edc_pharmacy_confirmationatsite_changelist"
186
- )
187
- url = (
188
- f"{url}?q={self.confirmation_at_site.transfer_confirmation_identifier}"
189
- )
171
+ url = reverse("edc_pharmacy_admin:edc_pharmacy_confirmationatsite_changelist")
172
+ url = f"{url}?q={self.confirmation_at_site.transfer_confirmation_identifier}"
190
173
  return url
191
174
  return "/"
192
175
 
@@ -223,9 +206,7 @@ class ConfirmationAtSiteView(
223
206
  return HttpResponseRedirect(url)
224
207
 
225
208
  stock_transfer_identifier = request.POST.get("stock_transfer_identifier")
226
- stock_transfer = self.get_stock_transfer(
227
- stock_transfer_identifier, suppress_msg=True
228
- )
209
+ stock_transfer = self.get_stock_transfer(stock_transfer_identifier, suppress_msg=True)
229
210
  location_id = request.POST.get("location_id")
230
211
  if not stock_transfer or not location_id:
231
212
  # nothing selected
@@ -234,9 +215,7 @@ class ConfirmationAtSiteView(
234
215
 
235
216
  session_uuid = request.POST.get("session_uuid")
236
217
  stock_codes = (
237
- request.POST.getlist("stock_codes")
238
- if request.POST.get("stock_codes")
239
- else []
218
+ request.POST.getlist("stock_codes") if request.POST.get("stock_codes") else []
240
219
  )
241
220
 
242
221
  # you have unconfirmed items, so go to the scan page
@@ -77,9 +77,7 @@ class DispenseView(EdcViewMixin, NavbarViewMixin, EdcProtocolViewMixin, Template
77
77
  def confirmation_at_site(self):
78
78
  confirmation_at_site_id = self.kwargs.get("confirmation_at_site")
79
79
  try:
80
- confirmation_at_site = ConfirmationAtSite.objects.get(
81
- id=confirmation_at_site_id
82
- )
80
+ confirmation_at_site = ConfirmationAtSite.objects.get(id=confirmation_at_site_id)
83
81
  except ObjectDoesNotExist:
84
82
  confirmation_at_site = None
85
83
  messages.add_message(
@@ -94,9 +92,7 @@ class DispenseView(EdcViewMixin, NavbarViewMixin, EdcProtocolViewMixin, Template
94
92
  formulation = Formulation.objects.get(pk=formulation_id)
95
93
  subject_identifier = request.POST.get("subject_identifier")
96
94
  container_count = request.POST.get("container_count")
97
- stock_codes = (
98
- request.POST.getlist("codes") if request.POST.get("codes") else None
99
- )
95
+ stock_codes = request.POST.getlist("codes") if request.POST.get("codes") else None
100
96
  rx = self.get_rx(subject_identifier, location, formulation)
101
97
  if not stock_codes and location and formulation and rx and container_count:
102
98
  url = reverse(
@@ -27,9 +27,7 @@ def move_to_bin(
27
27
  stock_codes
28
28
  )
29
29
  if new_capacity > 50:
30
- raise StorageBinError(
31
- f"Storage bin {storage_bin.name} capacity may not exceeded 50"
32
- )
30
+ raise StorageBinError(f"Storage bin {storage_bin.name} capacity may not exceeded 50")
33
31
  elif new_capacity > storage_bin.capacity:
34
32
  storage_bin.capacity = new_capacity
35
33
  storage_bin.save()
@@ -94,9 +92,7 @@ class MoveToStorageBinView(AddToStorageBinView):
94
92
  return None
95
93
 
96
94
  def post(self, request, *args, **kwargs):
97
- stock_codes = (
98
- request.POST.getlist("codes") if request.POST.get("codes") else None
99
- )
95
+ stock_codes = request.POST.getlist("codes") if request.POST.get("codes") else None
100
96
  storage_bin = StorageBin.objects.get(id=kwargs.get("storage_bin"))
101
97
  items_to_scan = request.POST.get("items_to_scan") or kwargs.get("items_to_scan")
102
98
  if items_to_scan:
@@ -41,9 +41,7 @@ class PrepareAndReviewStockRequestView(
41
41
  StockRequestItem.objects.values(
42
42
  "stock_request__request_identifier",
43
43
  "registered_subject__subject_identifier",
44
- ).filter(
45
- stock_request__location=stock_request.location, allocation__isnull=True
46
- )
44
+ ).filter(stock_request__location=stock_request.location, allocation__isnull=True)
47
45
  )
48
46
  df_unallocated_request_items.rename(
49
47
  columns={
@@ -67,9 +65,7 @@ class PrepareAndReviewStockRequestView(
67
65
  )
68
66
 
69
67
  # exclude unallocated subjects from appts
70
- df = df[
71
- ~df.subject_identifier.isin(df_unallocated_request_items.subject_identifier)
72
- ]
68
+ df = df[~df.subject_identifier.isin(df_unallocated_request_items.subject_identifier)]
73
69
  df.reset_index(drop=True, inplace=True)
74
70
 
75
71
  kwargs.update(
@@ -113,9 +109,7 @@ class PrepareAndReviewStockRequestView(
113
109
  nostock_dict["stock_qty"] = 0.0
114
110
  self.request.session[session_uuid] = nostock_dict
115
111
 
116
- stock_request_items_exist = (
117
- stock_request.stockrequestitem_set.all().exists()
118
- )
112
+ stock_request_items_exist = stock_request.stockrequestitem_set.all().exists()
119
113
  if stock_request_items_exist:
120
114
  messages.add_message(
121
115
  self.request,
@@ -22,9 +22,7 @@ from ..models import Stock
22
22
 
23
23
 
24
24
  @method_decorator(login_required, name="dispatch")
25
- class PrintLabelsView(
26
- EdcViewMixin, NavbarViewMixin, EdcProtocolViewMixin, TemplateView
27
- ):
25
+ class PrintLabelsView(EdcViewMixin, NavbarViewMixin, EdcProtocolViewMixin, TemplateView):
28
26
  stock_pks: list[str] | None = None
29
27
  template_name: str = "edc_pharmacy/stock/print_labels.html"
30
28
  session_key = "model_pks"
@@ -6,9 +6,7 @@ from ..models import StockTransfer
6
6
  from ..pdf_reports import ManifestReport, NumberedCanvas
7
7
 
8
8
 
9
- def print_stock_transfer_manifest_view(
10
- request, stock_transfer: StockTransfer | None = None
11
- ):
9
+ def print_stock_transfer_manifest_view(request, stock_transfer: StockTransfer | None = None):
12
10
 
13
11
  stock_transfer = StockTransfer.objects.get(pk=stock_transfer)
14
12
  response = HttpResponse(content_type="application/pdf")
@@ -16,9 +16,7 @@ from ..utils import transfer_stock
16
16
 
17
17
 
18
18
  @method_decorator(login_required, name="dispatch")
19
- class TransferStockView(
20
- EdcViewMixin, NavbarViewMixin, EdcProtocolViewMixin, TemplateView
21
- ):
19
+ class TransferStockView(EdcViewMixin, NavbarViewMixin, EdcProtocolViewMixin, TemplateView):
22
20
  """A view for transferring stock from central to a site.
23
21
 
24
22
  Creates a StockTransferItem instance per stock instance.
@@ -29,9 +29,7 @@ class PrnFormValidatorMixin(BaseFormValidatorMixin):
29
29
  fldname: str = None,
30
30
  error_code: str = None,
31
31
  ) -> ConsentDefinition:
32
- return site_consents.get_consent_definition(
33
- report_datetime=self.report_datetime
34
- )
32
+ return site_consents.get_consent_definition(report_datetime=self.report_datetime)
35
33
 
36
34
  @property
37
35
  def report_datetime(self) -> datetime:
edc_prn/prn.py CHANGED
@@ -26,18 +26,14 @@ class Prn:
26
26
  self.model = model
27
27
  self.add_button_id = f"{'_'.join(model.split('.'))}_add"
28
28
  self.dashboard_url_name = dashboard_url_name # next url
29
- self.show_on_dashboard = (
30
- True if show_on_dashboard is None else show_on_dashboard
31
- )
29
+ self.show_on_dashboard = True if show_on_dashboard is None else show_on_dashboard
32
30
 
33
31
  self.url_name = "_".join(self.model.split("."))
34
32
  sep = ":" if self.url_namespace else ""
35
33
  self.add_url_name = None
36
34
  if self.allow_add:
37
35
  self.add_url_name = f"{self.url_namespace}{sep}{self.url_name}_add"
38
- self.changelist_url_name = (
39
- f"{self.url_namespace}{sep}{self.url_name}_changelist"
40
- )
36
+ self.changelist_url_name = f"{self.url_namespace}{sep}{self.url_name}_changelist"
41
37
 
42
38
  def __repr__(self):
43
39
  return f"{self.__class__.__name__}(model={self.model})"
@@ -78,15 +78,11 @@ def add_prn_requisition_popover(appointment: Appointment, subject_dashboard_url)
78
78
  requisition.related_visit_model_attr = (
79
79
  requisition.model_cls.related_visit_model_attr()
80
80
  )
81
- requisition.related_visit = str(
82
- getattr(appointment.related_visit, "id", "")
83
- )
81
+ requisition.related_visit = str(getattr(appointment.related_visit, "id", ""))
84
82
  try:
85
- panel_id = (
86
- requisition.model_cls.panel.field.remote_field.model.objects.get(
87
- name=requisition.panel.name
88
- ).id
89
- )
83
+ panel_id = requisition.model_cls.panel.field.remote_field.model.objects.get(
84
+ name=requisition.panel.name
85
+ ).id
90
86
  except ObjectDoesNotExist:
91
87
  requisition.panel.id = None
92
88
  requisition.panel.pk = None
@@ -135,15 +135,12 @@ class ResearchProtocolConfig:
135
135
  return getattr(
136
136
  settings,
137
137
  "EDC_PROTOCOL_SUBJECT_IDENTIFIER_PATTERN",
138
- r"%(protocol_number)s\-[0-9\-]+"
139
- % dict(protocol_number=self.protocol_number),
138
+ r"%(protocol_number)s\-[0-9\-]+" % dict(protocol_number=self.protocol_number),
140
139
  )
141
140
 
142
141
  @property
143
142
  def screening_identifier_pattern(self) -> str:
144
- return getattr(
145
- settings, "EDC_PROTOCOL_SCREENING_IDENTIFIER_PATTERN", r"[A-Z0-9]{8}"
146
- )
143
+ return getattr(settings, "EDC_PROTOCOL_SCREENING_IDENTIFIER_PATTERN", r"[A-Z0-9]{8}")
147
144
 
148
145
  @property
149
146
  def study_open_datetime(self) -> datetime:
@@ -10,9 +10,7 @@ from ..models import ProtocolDeviationViolation
10
10
 
11
11
 
12
12
  @admin.register(ProtocolDeviationViolation, site=edc_protocol_incident_admin)
13
- class ProtocolDeviationViolationAdmin(
14
- ModelAdminSubjectDashboardMixin, SimpleHistoryAdmin
15
- ):
13
+ class ProtocolDeviationViolationAdmin(ModelAdminSubjectDashboardMixin, SimpleHistoryAdmin):
16
14
  form = ProtocolDeviationViolationForm
17
15
 
18
16
  fieldsets = (
@@ -11,9 +11,7 @@ protocol_violation_codenames = (
11
11
  "edc_protocol_incident.view_protocoldeviationviolation",
12
12
  )
13
13
 
14
- protocol_violation_view_codenames = (
15
- "edc_protocol_incident.view_protocoldeviationviolation",
16
- )
14
+ protocol_violation_view_codenames = ("edc_protocol_incident.view_protocoldeviationviolation",)
17
15
 
18
16
 
19
17
  protocol_incident_codenames = (
@@ -14,9 +14,7 @@ from .auth_objects import (
14
14
  )
15
15
  from .constants import PROTOCOL_DEVIATION_VIOLATION, PROTOCOL_INCIDENT
16
16
 
17
- incident_type = getattr(
18
- settings, "EDC_PROTOCOL_VIOLATION_TYPE", PROTOCOL_DEVIATION_VIOLATION
19
- )
17
+ incident_type = getattr(settings, "EDC_PROTOCOL_VIOLATION_TYPE", PROTOCOL_DEVIATION_VIOLATION)
20
18
 
21
19
  site_auths.add_group(*protocol_violation_codenames, name=PROTOCOL_VIOLATION)
22
20
  site_auths.add_group(*protocol_violation_view_codenames, name=PROTOCOL_VIOLATION_VIEW)
@@ -35,19 +35,13 @@ class IncidentFormvalidatorMixin:
35
35
  field="report_status",
36
36
  field_required="report_closed_datetime",
37
37
  )
38
- self.required_if(
39
- WITHDRAWN, field="report_status", field_required="reasons_withdrawn"
40
- )
38
+ self.required_if(WITHDRAWN, field="report_status", field_required="reasons_withdrawn")
41
39
 
42
40
  self.validate_date_not_before_incident("report_closed_datetime")
43
41
 
44
42
  def validate_date_not_before_incident(self, fld_name):
45
- if self.cleaned_data.get(fld_name) and self.cleaned_data.get(
46
- "incident_datetime"
47
- ):
48
- if self.cleaned_data.get(fld_name) < self.cleaned_data.get(
49
- "incident_datetime"
50
- ):
43
+ if self.cleaned_data.get(fld_name) and self.cleaned_data.get("incident_datetime"):
44
+ if self.cleaned_data.get(fld_name) < self.cleaned_data.get("incident_datetime"):
51
45
  self.raise_validation_error(
52
46
  {fld_name: "May not be before incident date/time"},
53
47
  error_code=INVALID_ERROR,
@@ -5,16 +5,10 @@ from ..constants import VIOLATION
5
5
  from .mixins import IncidentFormvalidatorMixin
6
6
 
7
7
 
8
- class ProtocolDeviationViolationFormValidator(
9
- IncidentFormvalidatorMixin, FormValidator
10
- ):
8
+ class ProtocolDeviationViolationFormValidator(IncidentFormvalidatorMixin, FormValidator):
11
9
  def clean(self):
12
- self.applicable_if(
13
- VIOLATION, field="report_type", field_applicable="safety_impact"
14
- )
15
- self.required_if(
16
- YES, field="safety_impact", field_required="safety_impact_details"
17
- )
10
+ self.applicable_if(VIOLATION, field="report_type", field_applicable="safety_impact")
11
+ self.required_if(YES, field="safety_impact", field_required="safety_impact_details")
18
12
  self.applicable_if(
19
13
  VIOLATION, field="report_type", field_applicable="study_outcomes_impact"
20
14
  )
@@ -24,14 +18,10 @@ class ProtocolDeviationViolationFormValidator(
24
18
  field_required="study_outcomes_impact_details",
25
19
  )
26
20
 
27
- self.required_if(
28
- VIOLATION, field="report_type", field_required="violation_datetime"
29
- )
21
+ self.required_if(VIOLATION, field="report_type", field_required="violation_datetime")
30
22
 
31
23
  if "violation_type" in self.cleaned_data:
32
- self.required_if(
33
- VIOLATION, field="report_type", field_required="violation_type"
34
- )
24
+ self.required_if(VIOLATION, field="report_type", field_required="violation_type")
35
25
  self.validate_other_specify(
36
26
  field="violation_type",
37
27
  other_specify_field="violation_type_other",
@@ -46,8 +36,6 @@ class ProtocolDeviationViolationFormValidator(
46
36
  self.required_if(
47
37
  VIOLATION, field="report_type", field_required="violation_description"
48
38
  )
49
- self.required_if(
50
- VIOLATION, field="report_type", field_required="violation_reason"
51
- )
39
+ self.required_if(VIOLATION, field="report_type", field_required="violation_reason")
52
40
 
53
41
  self.validate_close_report()
@@ -10,9 +10,7 @@ class ProtocolIncidentFormValidator(
10
10
  IncidentFormvalidatorMixin, PrnFormValidatorMixin, FormValidator
11
11
  ):
12
12
  def clean(self):
13
- self.required_if(
14
- YES, field="safety_impact", field_required="safety_impact_details"
15
- )
13
+ self.required_if(YES, field="safety_impact", field_required="safety_impact_details")
16
14
 
17
15
  self.required_if(
18
16
  YES,
@@ -22,16 +20,13 @@ class ProtocolIncidentFormValidator(
22
20
  if (
23
21
  self.cleaned_data.get("incident_datetime")
24
22
  and self.report_datetime
25
- and self.cleaned_data.get("incident_datetime")
26
- > to_local(self.report_datetime)
23
+ and self.cleaned_data.get("incident_datetime") > to_local(self.report_datetime)
27
24
  ):
28
25
  self.raise_validation_error(
29
26
  {"incident_datetime": "May not be after report date/time"},
30
27
  error_code=INVALID_ERROR,
31
28
  )
32
- self.validate_other_specify(
33
- field="incident", other_specify_field="incident_other"
34
- )
29
+ self.validate_other_specify(field="incident", other_specify_field="incident_other")
35
30
 
36
31
  self.required_if_not_none(
37
32
  field="corrective_action_datetime", field_required="corrective_action"
@@ -9,13 +9,14 @@ import django_audit_fields.fields.userfield
9
9
  import django_audit_fields.fields.uuid_auto_field
10
10
  import django_audit_fields.models.audit_model_mixin
11
11
  import django_revision.revision_field
12
- import edc_action_item.managers
13
- import edc_model.validators.date
14
- import edc_utils.date
15
12
  import simple_history.models
16
13
  from django.conf import settings
17
14
  from django.db import migrations, models
18
15
 
16
+ import edc_action_item.managers
17
+ import edc_model.validators.date
18
+ import edc_utils.date
19
+
19
20
 
20
21
  class Migration(migrations.Migration):
21
22
  initial = True
@@ -9,13 +9,14 @@ import django_audit_fields.fields.userfield
9
9
  import django_audit_fields.fields.uuid_auto_field
10
10
  import django_audit_fields.models.audit_model_mixin
11
11
  import django_revision.revision_field
12
- import edc_action_item.managers
13
- import edc_model.validators.date
14
- import edc_utils.date
15
12
  import simple_history.models
16
13
  from django.conf import settings
17
14
  from django.db import migrations, models
18
15
 
16
+ import edc_action_item.managers
17
+ import edc_model.validators.date
18
+ import edc_utils.date
19
+
19
20
 
20
21
  class Migration(migrations.Migration):
21
22
  replaces = [
@@ -1766,23 +1767,17 @@ class Migration(migrations.Migration):
1766
1767
  migrations.AddField(
1767
1768
  model_name="actionsrequired",
1768
1769
  name="plural_name",
1769
- field=models.CharField(
1770
- max_length=250, null=True, verbose_name="Plural name"
1771
- ),
1770
+ field=models.CharField(max_length=250, null=True, verbose_name="Plural name"),
1772
1771
  ),
1773
1772
  migrations.AddField(
1774
1773
  model_name="protocolincidents",
1775
1774
  name="plural_name",
1776
- field=models.CharField(
1777
- max_length=250, null=True, verbose_name="Plural name"
1778
- ),
1775
+ field=models.CharField(max_length=250, null=True, verbose_name="Plural name"),
1779
1776
  ),
1780
1777
  migrations.AddField(
1781
1778
  model_name="protocolviolations",
1782
1779
  name="plural_name",
1783
- field=models.CharField(
1784
- max_length=250, null=True, verbose_name="Plural name"
1785
- ),
1780
+ field=models.CharField(max_length=250, null=True, verbose_name="Plural name"),
1786
1781
  ),
1787
1782
  migrations.RemoveIndex(
1788
1783
  model_name="actionsrequired",
@@ -9,13 +9,14 @@ import django_audit_fields.fields.userfield
9
9
  import django_audit_fields.fields.uuid_auto_field
10
10
  import django_audit_fields.models.audit_model_mixin
11
11
  import django_revision.revision_field
12
- import edc_action_item.managers
13
- import edc_model.validators.date
14
- import edc_utils.date
15
12
  import simple_history.models
16
13
  from django.conf import settings
17
14
  from django.db import migrations, models
18
15
 
16
+ import edc_action_item.managers
17
+ import edc_model.validators.date
18
+ import edc_utils.date
19
+
19
20
 
20
21
  class Migration(migrations.Migration):
21
22
  dependencies = [
@@ -12,22 +12,16 @@ class Migration(migrations.Migration):
12
12
  migrations.AddField(
13
13
  model_name="actionsrequired",
14
14
  name="plural_name",
15
- field=models.CharField(
16
- max_length=250, null=True, verbose_name="Plural name"
17
- ),
15
+ field=models.CharField(max_length=250, null=True, verbose_name="Plural name"),
18
16
  ),
19
17
  migrations.AddField(
20
18
  model_name="protocolincidents",
21
19
  name="plural_name",
22
- field=models.CharField(
23
- max_length=250, null=True, verbose_name="Plural name"
24
- ),
20
+ field=models.CharField(max_length=250, null=True, verbose_name="Plural name"),
25
21
  ),
26
22
  migrations.AddField(
27
23
  model_name="protocolviolations",
28
24
  name="plural_name",
29
- field=models.CharField(
30
- max_length=250, null=True, verbose_name="Plural name"
31
- ),
25
+ field=models.CharField(max_length=250, null=True, verbose_name="Plural name"),
32
26
  ),
33
27
  ]
@@ -1,8 +1,8 @@
1
1
  # Generated by Django 4.2.4 on 2023-08-23 01:13
2
2
 
3
3
  import _socket
4
- from django.db import migrations, models
5
4
  import django_audit_fields.fields.hostname_modification_field
5
+ from django.db import migrations, models
6
6
 
7
7
 
8
8
  class Migration(migrations.Migration):
@@ -14,16 +14,12 @@ class Migration(migrations.Migration):
14
14
  migrations.AlterField(
15
15
  model_name="historicalprotocoldeviationviolation",
16
16
  name="device_created",
17
- field=models.CharField(
18
- blank=True, max_length=10, verbose_name="Device created"
19
- ),
17
+ field=models.CharField(blank=True, max_length=10, verbose_name="Device created"),
20
18
  ),
21
19
  migrations.AlterField(
22
20
  model_name="historicalprotocoldeviationviolation",
23
21
  name="device_modified",
24
- field=models.CharField(
25
- blank=True, max_length=10, verbose_name="Device modified"
26
- ),
22
+ field=models.CharField(blank=True, max_length=10, verbose_name="Device modified"),
27
23
  ),
28
24
  migrations.AlterField(
29
25
  model_name="historicalprotocoldeviationviolation",
@@ -49,16 +45,12 @@ class Migration(migrations.Migration):
49
45
  migrations.AlterField(
50
46
  model_name="historicalprotocolincident",
51
47
  name="device_created",
52
- field=models.CharField(
53
- blank=True, max_length=10, verbose_name="Device created"
54
- ),
48
+ field=models.CharField(blank=True, max_length=10, verbose_name="Device created"),
55
49
  ),
56
50
  migrations.AlterField(
57
51
  model_name="historicalprotocolincident",
58
52
  name="device_modified",
59
- field=models.CharField(
60
- blank=True, max_length=10, verbose_name="Device modified"
61
- ),
53
+ field=models.CharField(blank=True, max_length=10, verbose_name="Device modified"),
62
54
  ),
63
55
  migrations.AlterField(
64
56
  model_name="historicalprotocolincident",
@@ -84,16 +76,12 @@ class Migration(migrations.Migration):
84
76
  migrations.AlterField(
85
77
  model_name="protocoldeviationviolation",
86
78
  name="device_created",
87
- field=models.CharField(
88
- blank=True, max_length=10, verbose_name="Device created"
89
- ),
79
+ field=models.CharField(blank=True, max_length=10, verbose_name="Device created"),
90
80
  ),
91
81
  migrations.AlterField(
92
82
  model_name="protocoldeviationviolation",
93
83
  name="device_modified",
94
- field=models.CharField(
95
- blank=True, max_length=10, verbose_name="Device modified"
96
- ),
84
+ field=models.CharField(blank=True, max_length=10, verbose_name="Device modified"),
97
85
  ),
98
86
  migrations.AlterField(
99
87
  model_name="protocoldeviationviolation",
@@ -119,16 +107,12 @@ class Migration(migrations.Migration):
119
107
  migrations.AlterField(
120
108
  model_name="protocolincident",
121
109
  name="device_created",
122
- field=models.CharField(
123
- blank=True, max_length=10, verbose_name="Device created"
124
- ),
110
+ field=models.CharField(blank=True, max_length=10, verbose_name="Device created"),
125
111
  ),
126
112
  migrations.AlterField(
127
113
  model_name="protocolincident",
128
114
  name="device_modified",
129
- field=models.CharField(
130
- blank=True, max_length=10, verbose_name="Device modified"
131
- ),
115
+ field=models.CharField(blank=True, max_length=10, verbose_name="Device modified"),
132
116
  ),
133
117
  migrations.AlterField(
134
118
  model_name="protocolincident",
@@ -32,8 +32,7 @@ class ProtocolDeviationViolationModelMixin(models.Model):
32
32
  )
33
33
 
34
34
  safety_impact = models.CharField(
35
- verbose_name="Could this occurrence have an impact on safety of the "
36
- "participant?",
35
+ verbose_name="Could this occurrence have an impact on safety of the " "participant?",
37
36
  max_length=25,
38
37
  choices=YES_NO_NA,
39
38
  default=NOT_APPLICABLE,
@@ -79,8 +78,7 @@ class ProtocolDeviationViolationModelMixin(models.Model):
79
78
  null=True,
80
79
  blank=True,
81
80
  help_text=(
82
- "Describe in full. Explain how the violation "
83
- "happened, what occurred, etc."
81
+ "Describe in full. Explain how the violation " "happened, what occurred, etc."
84
82
  ),
85
83
  )
86
84
 
@@ -137,6 +135,4 @@ class ProtocolDeviationViolationModelMixin(models.Model):
137
135
  abstract = True
138
136
  verbose_name = "Protocol Deviation/Violation"
139
137
  verbose_name_plural = "Protocol Deviations/Violations"
140
- indexes = [
141
- models.Index(fields=["subject_identifier", "action_identifier", "site"])
142
- ]
138
+ indexes = [models.Index(fields=["subject_identifier", "action_identifier", "site"])]
@@ -132,6 +132,4 @@ class ProtocolIncidentModelMixin(models.Model):
132
132
  abstract = True
133
133
  verbose_name = "Protocol Incident"
134
134
  verbose_name_plural = "Protocol Incident"
135
- indexes = [
136
- models.Index(fields=["subject_identifier", "action_identifier", "site"])
137
- ]
135
+ indexes = [models.Index(fields=["subject_identifier", "action_identifier", "site"])]