clinicedc 2.0.1__py3-none-any.whl → 2.0.3__py3-none-any.whl
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- {clinicedc-2.0.1.dist-info → clinicedc-2.0.3.dist-info}/METADATA +15 -22
- {clinicedc-2.0.1.dist-info → clinicedc-2.0.3.dist-info}/RECORD +854 -787
- {clinicedc-2.0.1.dist-info → clinicedc-2.0.3.dist-info}/WHEEL +1 -1
- edc_action_item/action.py +10 -30
- edc_action_item/action_with_notification.py +1 -2
- edc_action_item/admin/action_item_admin.py +2 -6
- edc_action_item/admin_site.py +1 -3
- edc_action_item/auths.py +1 -3
- edc_action_item/create_or_update_action_type.py +1 -3
- edc_action_item/data_fixers.py +6 -20
- edc_action_item/forms/action_item_form.py +1 -3
- edc_action_item/management/commands/inspect_action_items.py +3 -9
- edc_action_item/migrations/0001_initial.py +4 -5
- edc_action_item/migrations/0003_auto_20180116_1528.py +2 -1
- edc_action_item/migrations/0006_auto_20180707_1659.py +3 -4
- edc_action_item/migrations/0007_auto_20180707_1715.py +1 -3
- edc_action_item/migrations/0008_auto_20180809_0303.py +2 -1
- edc_action_item/migrations/0014_auto_20181121_1738.py +2 -6
- edc_action_item/migrations/0015_auto_20190114_0250.py +4 -3
- edc_action_item/migrations/0021_auto_20190628_2113.py +1 -3
- edc_action_item/migrations/0022_auto_20190628_2136.py +2 -6
- edc_action_item/migrations/0030_edcpermissions.py +1 -1
- edc_action_item/migrations/0033_alter_actionitem_managers.py +1 -0
- edc_action_item/migrations/0034_alter_actionitem_device_created_and_more.py +13 -37
- edc_action_item/models/action_item.py +2 -6
- edc_action_item/models/action_model_mixin.py +5 -16
- edc_action_item/models/action_type.py +1 -3
- edc_action_item/models/reference.py +1 -2
- edc_action_item/models/signals.py +3 -9
- edc_action_item/site_action_items.py +5 -15
- edc_action_item/templatetags/action_item_extras.py +1 -3
- edc_action_item/view_utils/action_item_button.py +1 -3
- edc_action_item/view_utils/action_item_popover_list_item.py +1 -2
- edc_adherence/migrations/0002_nonadherencereasons_plural_name.py +1 -3
- edc_adherence/model_admin_mixin.py +1 -3
- edc_adverse_event/action_items/ae_followup_action.py +2 -6
- edc_adverse_event/action_items/ae_initial_action.py +3 -7
- edc_adverse_event/auth_objects.py +2 -6
- edc_adverse_event/constants.py +1 -3
- edc_adverse_event/form_validator_mixins/death_report_form_validator.py +1 -3
- edc_adverse_event/form_validator_mixins/requires_death_report_form_validator_mixin.py +2 -7
- edc_adverse_event/form_validators/hospitalization.py +1 -3
- edc_adverse_event/migrations/0003_auto_20191026_2231.py +3 -9
- edc_adverse_event/migrations/0008_auto_20220825_0451.py +1 -1
- edc_adverse_event/migrations/0009_auto_20220907_0157.py +1 -1
- edc_adverse_event/migrations/0010_auto_20220913_2139.py +4 -12
- edc_adverse_event/migrations/0013_alter_aeactionclassification_device_created_and_more.py +11 -31
- edc_adverse_event/model_mixins/ae_followup/ae_followup_fields_model_mixin.py +1 -3
- edc_adverse_event/model_mixins/ae_followup/ae_followup_model_mixin.py +1 -5
- edc_adverse_event/model_mixins/ae_initial/ae_initial_ae_model_mixin.py +1 -3
- edc_adverse_event/model_mixins/ae_initial/ae_initial_fields_model_mixin.py +1 -3
- edc_adverse_event/model_mixins/ae_initial/ae_initial_susar_model_mixin.py +1 -2
- edc_adverse_event/model_mixins/ae_special_interest/aesi_model_mixin.py +1 -5
- edc_adverse_event/model_mixins/ae_susar/ae_susar_model_mixin.py +1 -5
- edc_adverse_event/model_mixins/ae_tmg/ae_tmg_fields_model_mixin.py +2 -6
- edc_adverse_event/model_mixins/ae_tmg/ae_tmg_model_mixin.py +1 -5
- edc_adverse_event/model_mixins/death_report/death_report_extra_fields_model_mixin.py +1 -2
- edc_adverse_event/model_mixins/death_report/death_report_model_mixin.py +2 -5
- edc_adverse_event/model_mixins/death_report/death_report_tmg_model_mixin.py +2 -7
- edc_adverse_event/model_mixins/death_report/simple_death_report_model_mixin.py +1 -3
- edc_adverse_event/modeladmin_mixins/ae_tmg_admin_mixin.py +1 -3
- edc_adverse_event/modeladmin_mixins/death_report_admin_mixin.py +6 -10
- edc_adverse_event/modelform_mixins/ae_tmg_modelform_mixin.py +1 -3
- edc_adverse_event/models/signals.py +3 -9
- edc_adverse_event/pdf_reports/ae_pdf_report.py +6 -18
- edc_adverse_event/pdf_reports/death_pdf_report.py +3 -9
- edc_adverse_event/templatetags/edc_adverse_event_extras.py +5 -15
- edc_adverse_event/utils.py +2 -6
- edc_adverse_event/view_mixins/ae/ae_listboard_view_mixin.py +1 -3
- edc_adverse_event/view_mixins/ae/death_report_listboard_view_mixin.py +1 -3
- edc_adverse_event/view_mixins/tmg/tmg_ae_listboard_view_mixin.py +2 -6
- edc_adverse_event/view_utils/tmg_button.py +2 -6
- edc_adverse_event/views/home_view.py +1 -3
- edc_adverse_event/views/tmg/death_listboard_view.py +1 -3
- edc_adverse_event/views/tmg/home_view.py +2 -6
- edc_adverse_event/views/tmg/summary_listboard_view.py +1 -3
- edc_appointment/admin/appointment_admin.py +1 -3
- edc_appointment/admin/list_filters.py +1 -3
- edc_appointment/admin_site.py +1 -3
- edc_appointment/analytics/dataframes/get_appointment_df.py +2 -6
- edc_appointment/appointment_reason_updater.py +2 -5
- edc_appointment/appointment_status_updater.py +1 -4
- edc_appointment/constants.py +1 -3
- edc_appointment/creators/appointment_creator.py +4 -10
- edc_appointment/creators/unscheduled_appointment_creator.py +3 -7
- edc_appointment/creators/utils.py +4 -0
- edc_appointment/form_validator_mixins/next_appointment_crf_form_validator_mixin.py +3 -10
- edc_appointment/form_validator_mixins/window_period_form_validator_mixin.py +3 -9
- edc_appointment/form_validators/appointment_form_validator.py +11 -37
- edc_appointment/form_validators/next_appointment_crf_form_validator.py +1 -3
- edc_appointment/form_validators/utils.py +1 -3
- edc_appointment/managers.py +2 -6
- edc_appointment/migrations/0002_auto_20161126_1156.py +5 -8
- edc_appointment/migrations/0003_auto_20161127_2226.py +7 -16
- edc_appointment/migrations/0006_auto_20170106_2118.py +2 -1
- edc_appointment/migrations/0008_auto_20171115_1601.py +3 -4
- edc_appointment/migrations/0014_auto_20180116_1411.py +2 -1
- edc_appointment/migrations/0024_auto_20200911_0425.py +1 -1
- edc_appointment/migrations/0034_appointmenttype_alter_appointment_appt_type_and_more.py +2 -4
- edc_appointment/migrations/0036_auto_20230124_1822.py +2 -6
- edc_appointment/migrations/0040_appointment_appt_type_other_and_more.py +1 -0
- edc_appointment/migrations/0042_alter_appointment_device_created_and_more.py +5 -13
- edc_appointment/migrations/0046_infosources.py +1 -3
- edc_appointment/migrations/0047_alter_appointment_options_and_more.py +1 -3
- edc_appointment/model_mixins/appointment_methods_model_mixin.py +1 -5
- edc_appointment/model_mixins/appointment_model_mixin.py +2 -8
- edc_appointment/model_mixins/next_appointment_crf_model_mixin.py +1 -3
- edc_appointment/modeladmin_mixins/next_appointment_crf_modeladmin_mixin.py +1 -3
- edc_appointment/modelform_mixins/next_appointment_crf_modelform_mixins.py +1 -5
- edc_appointment/models/signals.py +5 -17
- edc_appointment/utils.py +11 -33
- edc_appointment/view_mixins/appointment_view_mixin.py +2 -6
- edc_auth/admin/list_filters.py +2 -6
- edc_auth/admin/role_admin.py +1 -3
- edc_auth/admin/user_admin.py +4 -12
- edc_auth/admin/user_profile_admin.py +2 -5
- edc_auth/auth_updater/auth_updater.py +1 -3
- edc_auth/auth_updater/group_updater.py +3 -9
- edc_auth/forms.py +1 -3
- edc_auth/get_app_codenames.py +1 -3
- edc_auth/import_users.py +3 -9
- edc_auth/management/commands/export_users.py +1 -3
- edc_auth/management/commands/reset_password.py +1 -3
- edc_auth/migrations/0001_squashed_0033_alter_userprofile_is_multisite_viewer.py +4 -12
- edc_auth/migrations/0015_auto_20191026_2149.py +1 -3
- edc_auth/migrations/0016_auto_20191026_2153.py +1 -3
- edc_auth/migrations/0025_permissions.py +1 -1
- edc_auth/migrations/0029_alter_edcpermissions_device_created_and_more.py +5 -13
- edc_auth/models/__init__.py +1 -3
- edc_auth/models/signals.py +2 -6
- edc_auth/models/user_profile.py +1 -3
- edc_auth/password_setter.py +1 -3
- edc_auth/system_checks.py +1 -5
- edc_auth/urls_for_accounts.py +1 -3
- edc_auth/utils.py +3 -9
- edc_consent/actions.py +3 -9
- edc_consent/consent_definition.py +2 -6
- edc_consent/consent_definition_extension.py +4 -12
- edc_consent/field_mixins/citizen_fields_mixin.py +2 -4
- edc_consent/field_mixins/identity_fields_mixin.py +1 -2
- edc_consent/field_mixins/personal_fields_mixin.py +8 -3
- edc_consent/field_mixins/site_fields_mixin.py +1 -2
- edc_consent/form_validators/subject_consent_form_validator.py +2 -7
- edc_consent/migrations/0001_initial.py +1 -1
- edc_consent/migrations/0002_alter_edcpermissions_device_created_and_more.py +3 -7
- edc_consent/model_mixins/consent_extension_model_mixin.py +1 -3
- edc_consent/model_mixins/consent_model_mixin.py +3 -9
- edc_consent/modeladmin_mixins/consent_model_admin_mixin.py +7 -17
- edc_consent/modelform_mixins/consent_modelform_mixin/consent_modelform_validation_mixin.py +3 -8
- edc_consent/modelform_mixins/requires_consent_modelform_mixin.py +1 -3
- edc_consent/models/signals.py +2 -6
- edc_consent/site_consents.py +5 -17
- edc_consent/system_checks.py +3 -9
- edc_consent/validators.py +1 -2
- edc_consent/view_mixins/consent_view_mixins.py +3 -5
- edc_crf/crf_form_validator.py +2 -6
- edc_crf/crf_form_validator_mixins.py +2 -6
- edc_crf/migrations/0004_alter_crfstatus_device_created_and_more.py +3 -7
- edc_crf/utils.py +1 -3
- edc_dashboard/management/commands/update_search_slugs.py +1 -3
- edc_dashboard/migrations/0001_initial.py +1 -1
- edc_dashboard/migrations/0003_alter_edcpermissions_device_created_and_more.py +3 -7
- edc_dashboard/templatetags/edc_dashboard_extras.py +2 -6
- edc_dashboard/view_mixins/administration_view_mixin.py +1 -3
- edc_dashboard/view_mixins/edc_view_mixin.py +1 -3
- edc_dashboard/views/administration_view.py +1 -3
- edc_data_manager/action_items.py +1 -3
- edc_data_manager/admin/actions.py +3 -9
- edc_data_manager/admin/data_query_admin.py +4 -12
- edc_data_manager/admin/query_rule_admin.py +4 -13
- edc_data_manager/auths.py +1 -3
- edc_data_manager/forms/data_query.py +2 -6
- edc_data_manager/forms/query_rule.py +1 -3
- edc_data_manager/get_longitudinal_value.py +2 -5
- edc_data_manager/handlers/handlers.py +2 -6
- edc_data_manager/migrations/0001_initial.py +4 -3
- edc_data_manager/migrations/0003_auto_20190806_1749.py +2 -6
- edc_data_manager/migrations/0004_auto_20190806_1750.py +1 -3
- edc_data_manager/migrations/0025_edcpermissions.py +1 -1
- edc_data_manager/migrations/0027_alter_dataquery_dm_user.py +1 -1
- edc_data_manager/migrations/0028_alter_dataquery_options_alter_queryrule_options_and_more.py +2 -1
- edc_data_manager/migrations/0029_alter_dataquery_managers.py +2 -1
- edc_data_manager/migrations/0030_alter_datadictionary_device_created_and_more.py +15 -43
- edc_data_manager/models/model_mixins.py +1 -3
- edc_data_manager/populate_data_dictionary.py +1 -2
- edc_data_manager/post_migrate_signals.py +1 -3
- edc_data_manager/site_data_manager.py +1 -3
- edc_document_status/model_mixins.py +1 -3
- edc_egfr/__init__.py +1 -0
- edc_egfr/admin/__init__.py +1 -0
- edc_egfr/admin/egfr_drop_notification_admin_mixin.py +73 -0
- edc_egfr/apps.py +5 -0
- edc_egfr/calculators/__init__.py +4 -0
- edc_egfr/calculators/base_egrfr.py +56 -0
- edc_egfr/calculators/egfr_ckd_epi.py +68 -0
- edc_egfr/calculators/egfr_cockcroft_gault.py +63 -0
- edc_egfr/calculators/percent_change.py +7 -0
- edc_egfr/constants.py +1 -0
- edc_egfr/egfr.py +237 -0
- edc_egfr/form_validator_mixins/__init__.py +4 -0
- edc_egfr/form_validator_mixins/egfr_form_validator_mixins.py +55 -0
- edc_egfr/get_drop_notification_model.py +10 -0
- edc_egfr/get_egfr_for_subject.py +31 -0
- edc_egfr/model_mixins/__init__.py +2 -0
- edc_egfr/model_mixins/egfr_drop_notification_model_mixin.py +63 -0
- edc_egfr/model_mixins/egfr_model_mixin.py +120 -0
- edc_export/archive_exporter.py +2 -6
- edc_export/exportables.py +2 -6
- edc_export/files_emailer.py +1 -3
- edc_export/management/commands/import_receipts.py +1 -3
- edc_export/managers.py +3 -9
- edc_export/migrations/0001_initial.py +15 -36
- edc_export/migrations/0005_exportdata_importdata.py +1 -3
- edc_export/migrations/0006_auto_20200512_0208.py +2 -6
- edc_export/migrations/0010_auto_20210910_1636.py +2 -6
- edc_export/migrations/0013_edcpermissions.py +1 -1
- edc_export/migrations/0015_alter_datarequest_managers_and_more.py +2 -1
- edc_export/migrations/0016_alter_datarequest_device_created_and_more.py +27 -79
- edc_export/migrations/0017_alter_datarequest_options_and_more.py +2 -6
- edc_export/migrations/0020_remove_datarequesthistory_edc_export__exporte_ba8050_idx_and_more.py +2 -6
- edc_export/model_exporter/model_exporter.py +4 -15
- edc_export/model_exporter/object_history_helpers.py +1 -3
- edc_export/model_exporter/value_getter.py +5 -14
- edc_export/models/signals.py +1 -3
- edc_export/models/upload_export_receipt_file.py +1 -3
- edc_export/utils.py +1 -4
- edc_export/views/export_selected_models_view.py +6 -17
- edc_facility/default_definitions.py +1 -3
- edc_facility/facility.py +4 -14
- edc_facility/import_holidays.py +1 -3
- edc_facility/migrations/0005_healthfacility_healthfacilitytypes_and_more.py +4 -6
- edc_facility/migrations/0006_alter_healthfacility_health_facility_type.py +1 -1
- edc_facility/migrations/0008_alter_healthfacility_device_created_and_more.py +5 -13
- edc_facility/models/holiday.py +1 -3
- edc_facility/utils.py +1 -3
- edc_fieldsets/fieldsets_modeladmin_mixin.py +1 -3
- edc_form_describer/form_describer.py +3 -9
- edc_form_describer/make_forms_reference.py +1 -3
- edc_form_describer/management/commands/make_forms_reference.py +1 -3
- edc_form_runners/admin/issue_admin.py +2 -6
- edc_form_runners/form_runner.py +4 -13
- edc_form_runners/form_runner_by_scr_id.py +1 -3
- edc_form_runners/get_form_runner.py +1 -3
- edc_form_runners/get_form_runner_by_src_id.py +3 -3
- edc_form_runners/management/commands/run_form_runners.py +1 -3
- edc_form_runners/migrations/0001_initial.py +2 -4
- edc_form_runners/run_form_runners.py +1 -3
- edc_form_runners/utils.py +1 -3
- edc_form_validators/applicable_field_validator.py +6 -17
- edc_form_validators/base_form_validator.py +1 -3
- edc_form_validators/date_range_validator.py +4 -12
- edc_form_validators/date_validator.py +3 -9
- edc_form_validators/many_to_many_field_validator.py +1 -3
- edc_form_validators/other_specify_field_validator.py +3 -7
- edc_form_validators/range_field_validator.py +1 -3
- edc_form_validators/required_field_validator.py +5 -18
- edc_glucose/__init__.py +0 -0
- edc_glucose/apps.py +6 -0
- edc_glucose/constants.py +3 -0
- edc_glucose/fieldsets.py +14 -0
- edc_glucose/form_validators/__init__.py +6 -0
- edc_glucose/form_validators/fasting_form_validator.py +12 -0
- edc_glucose/form_validators/fbg_form_validator_mixin.py +32 -0
- edc_glucose/form_validators/fbg_ogtt_form_validator_mixin.py +47 -0
- edc_glucose/form_validators/glucose_form_validator.py +44 -0
- edc_glucose/form_validators/glucose_form_validator_mixin.py +53 -0
- edc_glucose/form_validators/ogtt_form_validator_mixin.py +91 -0
- edc_glucose/list_filters.py +42 -0
- edc_glucose/migrations/__init__.py +0 -0
- edc_glucose/model_mixin_factories/__init__.py +4 -0
- edc_glucose/model_mixin_factories/fasting_model_mixin_factory.py +63 -0
- edc_glucose/model_mixin_factories/fbg_model_mixin_factory.py +48 -0
- edc_glucose/model_mixin_factories/glucose_model_mixin_factory.py +49 -0
- edc_glucose/model_mixin_factories/ogtt_model_mixin_factory.py +71 -0
- edc_glucose/model_mixins/__init__.py +5 -0
- edc_glucose/model_mixins/fasting_model_mixin.py +15 -0
- edc_glucose/model_mixins/fbg_model_mixin.py +10 -0
- edc_glucose/model_mixins/glucose_model_mixin.py +17 -0
- edc_glucose/model_mixins/hba1c_model_mixin.py +42 -0
- edc_glucose/model_mixins/ogtt_model_mixin.py +10 -0
- edc_glucose/models.py +0 -0
- edc_glucose/utils.py +42 -0
- edc_identifier/admin_site.py +1 -3
- edc_identifier/identifier.py +1 -3
- edc_identifier/migrations/0001_initial.py +3 -4
- edc_identifier/migrations/0001_squashed_0018_auto_20180128_1054.py +3 -2
- edc_identifier/migrations/0005_alter_identifiermodel_managers.py +2 -1
- edc_identifier/migrations/0005_historicalidentifierhistory_historicalidentifiertracker_historicalsubjectidentifier.py +4 -5
- edc_identifier/migrations/0006_auto_20161127_2226.py +16 -43
- edc_identifier/migrations/0007_alter_identifiermodel_device_created_and_more.py +3 -7
- edc_identifier/migrations/0007_auto_20161204_2227.py +4 -7
- edc_identifier/migrations/0009_auto_20161221_2323.py +1 -0
- edc_identifier/migrations/0010_auto_20170112_0602.py +2 -1
- edc_identifier/migrations/0012_auto_20171116_1606.py +2 -1
- edc_identifier/migrations/0013_auto_20171230_1316.py +3 -9
- edc_identifier/research_identifier.py +3 -11
- edc_identifier/short_identifier.py +5 -9
- edc_identifier/utils.py +1 -3
- edc_lab/admin/modeladmin_mixins.py +2 -8
- edc_lab/aliquot_types.py +1 -3
- edc_lab/form_validators/requisition_form_validator_mixin.py +1 -3
- edc_lab/forms/box_type_form.py +4 -6
- edc_lab/lab/aliquot_type.py +2 -6
- edc_lab/lab/manifest.py +2 -6
- edc_lab/lab/primary_aliquot.py +1 -3
- edc_lab/lab/requisition_panel.py +1 -3
- edc_lab/lab/requisition_panel_group.py +2 -6
- edc_lab/lab/specimen.py +1 -3
- edc_lab/labels/aliquot_label.py +4 -6
- edc_lab/labels/manifest_label.py +1 -3
- edc_lab/migrations/0001_initial.py +12 -29
- edc_lab/migrations/0002_auto_20170305_1939.py +4 -12
- edc_lab/migrations/0007_auto_20170321_1119.py +2 -6
- edc_lab/migrations/0008_auto_20170921_0719.py +2 -1
- edc_lab/migrations/0010_auto_20171127_1541.py +3 -2
- edc_lab/migrations/0012_auto_20180114_1438.py +2 -1
- edc_lab/migrations/0013_auto_20180117_1438.py +2 -1
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- edc_pharmacy/views/move_to_storage_bin_view.py +2 -6
- edc_pharmacy/views/prepare_and_review_stock_request_view.py +3 -9
- edc_pharmacy/views/print_labels_view.py +1 -3
- edc_pharmacy/views/print_stock_transfer_manifest_view.py +1 -3
- edc_pharmacy/views/transfer_stock_view.py +1 -3
- edc_prn/modelform_mixins.py +1 -3
- edc_prn/prn.py +2 -6
- edc_prn/templatetags/edc_prn_extras.py +4 -8
- edc_protocol/research_protocol_config.py +2 -5
- edc_protocol_incident/admin/protocol_deviation_violation_admin.py +1 -3
- edc_protocol_incident/auth_objects.py +1 -3
- edc_protocol_incident/auths.py +1 -3
- edc_protocol_incident/form_validators/mixins.py +3 -9
- edc_protocol_incident/form_validators/protocol_deviation_violation_form_validator.py +6 -18
- edc_protocol_incident/form_validators/protocol_incident_form_validator.py +3 -8
- edc_protocol_incident/migrations/0001_initial.py +4 -3
- edc_protocol_incident/migrations/0001_squashed_0015_auto_20220927_0401.py +7 -12
- edc_protocol_incident/migrations/0005_protocolincident_historicalprotocolincident_and_more.py +4 -3
- edc_protocol_incident/migrations/0012_auto_20220913_2139.py +3 -9
- edc_protocol_incident/migrations/0020_alter_historicalprotocoldeviationviolation_device_created_and_more.py +9 -25
- edc_protocol_incident/model_mixins/protocol_deviation_violation_model_mixin.py +3 -7
- edc_protocol_incident/model_mixins/protocol_incident_model_mixin.py +1 -3
- edc_protocol_incident/urls.py +1 -3
- edc_pylabels/actions.py +2 -6
- edc_pylabels/admin/label_configuration_admin.py +4 -4
- edc_pylabels/drawing_callable_example.py +1 -3
- edc_pylabels/migrations/0001_initial.py +1 -3
- edc_pylabels/migrations/0002_alter_label_options_label_created_and_more.py +2 -6
- edc_pylabels/migrations/0005_labelconfiguration_delete_label_and_more.py +1 -3
- edc_pylabels/models/label_configuration.py +1 -3
- edc_qareports/migrations/0001_initial.py +3 -4
- edc_qareports/migrations/0005_edcpermissions.py +2 -4
- edc_qareports/migrations/0006_qareportlog.py +2 -1
- edc_qareports/migrations/0007_qareportlog_edc_qarepor_accesse_738ffe_idx.py +1 -3
- edc_qareports/migrations/0017_auto_20240816_0256.py +1 -0
- edc_qareports/model_mixins/note_model_mixin.py +1 -3
- edc_qareports/modeladmin_mixins/list_filters.py +8 -12
- edc_qareports/modeladmin_mixins/note_modeladmin_mixin.py +1 -3
- edc_qareports/modeladmin_mixins/on_study_missing_values_modeladmin_mixin.py +2 -6
- edc_qareports/modeladmin_mixins/qa_report_modeladmin_mixin.py +1 -3
- edc_qareports/sql_generator/crf_case.py +1 -5
- edc_qareports/sql_generator/sql_view_generator.py +1 -3
- edc_qareports/utils.py +2 -6
- edc_randomization/admin.py +1 -3
- edc_randomization/auths.py +2 -6
- edc_randomization/blinding.py +1 -3
- edc_randomization/migrations/0001_initial.py +3 -4
- edc_randomization/migrations/0009_edcpermissions.py +1 -1
- edc_randomization/migrations/0011_alter_edcpermissions_device_created_and_more.py +7 -19
- edc_randomization/model_mixins.py +2 -5
- edc_randomization/randomization_list_importer.py +3 -7
- edc_randomization/randomization_list_verifier.py +2 -7
- edc_randomization/randomizer.py +2 -6
- edc_randomization/site_randomizers.py +1 -3
- edc_randomization/system_checks.py +1 -3
- edc_randomization/utils.py +2 -6
- edc_refusal/admin.py +1 -3
- edc_refusal/forms.py +1 -2
- edc_refusal/migrations/0001_initial.py +2 -1
- edc_refusal/migrations/0002_historicalsubjectrefusal.py +6 -4
- edc_refusal/migrations/0004_refusalreasons_plural_name.py +1 -3
- edc_refusal/migrations/0005_alter_subjectrefusal_options_and_more.py +2 -1
- edc_refusal/migrations/0006_alter_subjectrefusal_managers.py +2 -1
- edc_refusal/migrations/0008_alter_historicalsubjectrefusal_device_created_and_more.py +5 -13
- edc_registration/admin_site.py +1 -3
- edc_registration/migrations/0001_initial.py +3 -4
- edc_registration/migrations/0002_auto_20161127_2226.py +4 -7
- edc_registration/migrations/0004_auto_20161221_0018.py +2 -1
- edc_registration/migrations/0005_auto_20170111_1809.py +2 -1
- edc_registration/migrations/0008_auto_20170810_1032.py +2 -1
- edc_registration/migrations/0012_auto_20180116_1528.py +2 -1
- edc_registration/migrations/0015_auto_20181006_2257.py +1 -1
- edc_registration/migrations/0016_historicalregisteredsubject.py +5 -6
- edc_registration/migrations/0026_historicalregisteredsubject_familiar_name_and_more.py +1 -1
- edc_registration/migrations/0028_alter_registeredsubject_managers.py +1 -1
- edc_registration/migrations/0029_alter_historicalregisteredsubject_device_created_and_more.py +5 -13
- edc_registration/modeladmin_mixins.py +1 -3
- edc_registration/models/registered_subject.py +4 -11
- edc_registration/utils.py +1 -3
- edc_reportable/admin_site.py +1 -3
- edc_reportable/data/normal_data/africa.py +4 -14
- edc_reportable/evaluator.py +2 -6
- edc_reportable/formula.py +2 -6
- edc_reportable/management/commands/export_reportables.py +1 -3
- edc_reportable/migrations/0001_initial.py +3 -9
- edc_reportable/migrations/0003_referencerangecollection_grade1_and_more.py +3 -9
- edc_reportable/migrations/0004_alter_referencerangecollection_grade3_and_more.py +4 -7
- edc_reportable/migrations/0006_alter_gradingdata_revision_and_more.py +8 -19
- edc_reportable/models/mw.py +1 -3
- edc_reportable/models/reference_model_mixins.py +1 -3
- edc_reportable/models/reference_range_collection.py +3 -9
- edc_reportable/post_migrate_signals.py +1 -3
- edc_reportable/reference_range_evaluator.py +4 -11
- edc_reportable/utils/convert_units.py +1 -3
- edc_reportable/utils/get_grade_for_value.py +3 -1
- edc_reportable/utils/get_reference_range_collection.py +2 -2
- edc_reportable/utils/load_data.py +1 -3
- edc_reportable/utils/update_grading_data.py +2 -6
- edc_review_dashboard/migrations/0001_initial.py +1 -1
- edc_review_dashboard/migrations/0003_alter_edcpermissions_device_created_and_more.py +3 -7
- edc_review_dashboard/views/subject_review_listboard_view.py +1 -3
- edc_screening/eligibility.py +1 -3
- edc_screening/fc.py +1 -3
- edc_screening/migrations/0001_initial.py +1 -1
- edc_screening/migrations/0002_alter_edcpermissions_device_created_and_more.py +3 -7
- edc_screening/model_mixins/eligibility_model_mixin.py +1 -3
- edc_screening/model_mixins/screening_fields_model_mixin.py +2 -0
- edc_screening/modelform_mixins.py +1 -3
- edc_search/search_slug.py +2 -6
- edc_search/updater.py +2 -5
- edc_sites/admin/site_model_admin_mixin.py +4 -12
- edc_sites/management/commands/sync_sites.py +1 -3
- edc_sites/migrations/0007_edcpermissions.py +2 -4
- edc_sites/single_site/get_languages.py +1 -3
- edc_sites/site.py +4 -11
- edc_sites/system_checks.py +1 -4
- edc_sites/utils/add_or_update_django_sites.py +1 -3
- edc_subject_dashboard/migrations/0001_initial.py +1 -1
- edc_subject_dashboard/migrations/0002_alter_edcpermissions_device_created_and_more.py +3 -7
- edc_subject_dashboard/requisition_labels.py +1 -3
- edc_subject_dashboard/requisition_report.py +5 -15
- edc_subject_dashboard/requisition_verifier.py +2 -7
- edc_subject_dashboard/templatetags/edc_subject_dashboard_extras.py +2 -6
- edc_subject_dashboard/view_mixins/subject_visit_view_mixin.py +1 -2
- edc_subject_dashboard/view_utils/crf_button.py +1 -3
- edc_subject_dashboard/view_utils/subject_consent_listboard_button.py +1 -3
- edc_subject_dashboard/view_utils/timepoint_status_button.py +1 -3
- edc_subject_dashboard/views/requisition_print_actions_view.py +4 -12
- edc_subject_dashboard/views/requisition_verify_actions_view.py +1 -3
- edc_subject_dashboard/views/subject_dashboard_view.py +1 -3
- edc_timepoint/apps.py +1 -3
- edc_timepoint/timepoint.py +1 -3
- edc_timepoint/timepoint_lookup.py +1 -3
- edc_transfer/form_validators.py +4 -6
- edc_transfer/model_mixins.py +1 -3
- edc_transfer/modelform_mixins.py +1 -3
- edc_unblinding/action_items.py +1 -3
- edc_unblinding/admin_site.py +1 -3
- edc_unblinding/migrations/0001_initial.py +6 -4
- edc_unblinding/migrations/0002_auto_20210908_2318.py +1 -1
- edc_unblinding/migrations/0009_alter_unblindingrequest_managers_and_more.py +2 -1
- edc_unblinding/migrations/0010_alter_historicalunblindingrequest_device_created_and_more.py +9 -25
- edc_unblinding/models/unblinding_request.py +1 -3
- edc_unblinding/models/unblinding_review.py +1 -3
- edc_utils/age.py +1 -3
- edc_utils/date.py +1 -3
- edc_utils/paths_for_urlpatterns.py +1 -3
- edc_utils/show_urls.py +1 -3
- edc_utils/text.py +1 -2
- edc_view_utils/model_button.py +5 -13
- edc_view_utils/query_button.py +1 -3
- edc_visit_schedule/admin/subject_schedule_history_admin.py +1 -3
- edc_visit_schedule/baseline.py +1 -3
- edc_visit_schedule/migrations/0001_initial.py +3 -4
- edc_visit_schedule/migrations/0003_historicalvisitschedule_visitschedule.py +1 -3
- edc_visit_schedule/migrations/0004_auto_20190629_1800.py +1 -3
- edc_visit_schedule/migrations/0011_alter_historicalvisitschedule_device_created_and_more.py +7 -19
- edc_visit_schedule/migrations/0012_alter_subjectschedulehistory_managers_and_more.py +2 -1
- edc_visit_schedule/migrations/0015_historicalonschedule_offschedule_onschedule.py +9 -13
- edc_visit_schedule/migrations/0017_alter_onschedule_managers.py +2 -1
- edc_visit_schedule/model_mixins/crf/crf_schedule_model_mixin.py +1 -1
- edc_visit_schedule/model_mixins/off_schedule_model_mixin.py +2 -6
- edc_visit_schedule/model_mixins/on_schedule_model_mixin.py +1 -3
- edc_visit_schedule/modelform_mixins/off_schedule_modelform_mixin.py +1 -3
- edc_visit_schedule/models/subject_schedule_history.py +3 -8
- edc_visit_schedule/ordered_collection.py +1 -3
- edc_visit_schedule/schedule/schedule.py +6 -17
- edc_visit_schedule/simple_model_validator.py +3 -8
- edc_visit_schedule/site_visit_schedules.py +5 -15
- edc_visit_schedule/subject_schedule.py +4 -16
- edc_visit_schedule/system_checks.py +1 -3
- edc_visit_schedule/utils.py +8 -17
- edc_visit_schedule/view_mixins.py +4 -10
- edc_visit_schedule/visit/crf.py +1 -2
- edc_visit_schedule/visit/requisition.py +1 -3
- edc_visit_schedule/visit/visit.py +6 -16
- edc_visit_schedule/visit/window_period.py +3 -3
- edc_visit_schedule/visit_schedule/visit_schedule.py +2 -5
- edc_visit_tracking/crf_date_validator.py +1 -2
- edc_visit_tracking/form_validators/visit_form_validator.py +2 -8
- edc_visit_tracking/form_validators/visit_missed_form_validator.py +3 -9
- edc_visit_tracking/migrations/0003_auto_20220913_2139.py +2 -6
- edc_visit_tracking/migrations/0004_subjectvisit_subjectvisitmissedreasons_extra_value_and_more.py +8 -16
- edc_visit_tracking/model_mixins/base/visit_methods_model_mixin.py +2 -6
- edc_visit_tracking/model_mixins/crfs/visit_tracking_crf_model_mixin.py +1 -3
- edc_visit_tracking/model_mixins/requisitions/visit_tracking_requisition_model_mixin.py +1 -3
- edc_visit_tracking/model_mixins/subject_visit_missed_model_mixin.py +1 -3
- edc_visit_tracking/model_mixins/visit_model_mixin/visit_model_fields_mixin.py +1 -2
- edc_visit_tracking/modeladmin_mixins/crf_model_admin_mixin.py +4 -8
- edc_visit_tracking/modeladmin_mixins/visit_model_admin_mixin.py +4 -6
- edc_visit_tracking/modelform_mixins/crf/visit_tracking_crf_modelform_mixin.py +2 -6
- edc_visit_tracking/modelform_mixins/utils.py +1 -3
- edc_visit_tracking/modelform_mixins/visit_tracking_modelform_mixin.py +1 -2
- edc_visit_tracking/models/signals.py +1 -3
- edc_visit_tracking/stubs.py +1 -3
- edc_visit_tracking/utils.py +1 -2
- edc_visit_tracking/view_utils/related_visit_button.py +1 -3
- edc_visit_tracking/visit_sequence.py +1 -3
- edc_vitals/__init__.py +2 -0
- edc_vitals/apps.py +6 -0
- edc_vitals/calculators/__init__.py +1 -0
- edc_vitals/calculators/bmi.py +70 -0
- edc_vitals/form_validators/__init__.py +5 -0
- edc_vitals/form_validators/blood_pressure_form_validator_mixin.py +40 -0
- edc_vitals/form_validators/bmi_form_validator_mixin.py +19 -0
- edc_vitals/form_validators/weight_height_with_bmi_form_validator_mixin.py +13 -0
- edc_vitals/migrations/__init__.py +0 -0
- edc_vitals/model_mixins/__init__.py +5 -0
- edc_vitals/model_mixins/blood_pressure_model_mixin.py +80 -0
- edc_vitals/model_mixins/weight_height_bmi_model_mixin.py +42 -0
- edc_vitals/models/__init__.py +10 -0
- edc_vitals/models/fields/__init__.py +7 -0
- edc_vitals/models/fields/blood_pressure.py +36 -0
- edc_vitals/models/fields/heart_rate.py +22 -0
- edc_vitals/models/fields/height.py +26 -0
- edc_vitals/models/fields/respiratory_rate.py +22 -0
- edc_vitals/models/fields/temperature.py +26 -0
- edc_vitals/models/fields/waist_circumference.py +23 -0
- edc_vitals/models/fields/weight.py +26 -0
- edc_vitals/utils.py +51 -0
- edc_vitals/validators.py +5 -0
- edc_lab_results/model_mixin_factory/__init__.py +0 -2
- {clinicedc-2.0.1.dist-info → clinicedc-2.0.3.dist-info}/licenses/LICENSE +0 -0
edc_navbar/navbar.py
CHANGED
|
@@ -20,9 +20,7 @@ class Navbar:
|
|
|
20
20
|
|
|
21
21
|
def register(self, navbar_item: NavbarItem):
|
|
22
22
|
if navbar_item in self.navbar_items:
|
|
23
|
-
raise NavbarError(
|
|
24
|
-
f"Duplicate navbar item. See {self}. Got{navbar_item.name}"
|
|
25
|
-
)
|
|
23
|
+
raise NavbarError(f"Duplicate navbar item. See {self}. Got{navbar_item.name}")
|
|
26
24
|
self.navbar_items.append(navbar_item)
|
|
27
25
|
|
|
28
26
|
@property
|
edc_navbar/navbar_item.py
CHANGED
|
@@ -52,9 +52,7 @@ class NavbarItem:
|
|
|
52
52
|
try:
|
|
53
53
|
url_name = url_names.get(self.url_name)
|
|
54
54
|
except InvalidDashboardUrlName:
|
|
55
|
-
url_name = (
|
|
56
|
-
self.url_name.split(":")[1] if self.no_url_namespace else self.url_name
|
|
57
|
-
)
|
|
55
|
+
url_name = self.url_name.split(":")[1] if self.no_url_namespace else self.url_name
|
|
58
56
|
return url_name
|
|
59
57
|
|
|
60
58
|
def set_disabled(self, user: User | None = None):
|
edc_navbar/site_navbars.py
CHANGED
|
@@ -34,9 +34,7 @@ class NavbarCollection:
|
|
|
34
34
|
self.registry.update({navbar.name: navbar})
|
|
35
35
|
# self.codenames.update(**navbar.codenames)
|
|
36
36
|
else:
|
|
37
|
-
raise AlreadyRegistered(
|
|
38
|
-
f"Navbar with name {navbar.name} is already registered."
|
|
39
|
-
)
|
|
37
|
+
raise AlreadyRegistered(f"Navbar with name {navbar.name} is already registered.")
|
|
40
38
|
|
|
41
39
|
def context(self, name=None, selected_item=None):
|
|
42
40
|
"""Returns the named navbar in the collection as context."""
|
|
@@ -92,9 +90,7 @@ class NavbarCollection:
|
|
|
92
90
|
try:
|
|
93
91
|
before_import_registry = copy.copy(site_navbars.registry)
|
|
94
92
|
import_module(f"{app}.{module_name}")
|
|
95
|
-
writer(
|
|
96
|
-
f" - registered navbars '{module_name}' from '{app}'\n"
|
|
97
|
-
)
|
|
93
|
+
writer(f" - registered navbars '{module_name}' from '{app}'\n")
|
|
98
94
|
except NavbarError as e:
|
|
99
95
|
writer(f" * loading {app}.navbars ... \n")
|
|
100
96
|
writer(style.ERROR(f"ERROR! {e}\n"))
|
|
@@ -15,9 +15,7 @@ def render_navbar(context) -> dict:
|
|
|
15
15
|
user = getattr(context["request"], "user", None)
|
|
16
16
|
user_id = getattr(user, "id", None)
|
|
17
17
|
try:
|
|
18
|
-
auth_user_change_url = reverse(
|
|
19
|
-
"edc_auth_admin:auth_user_change", args=(user_id,)
|
|
20
|
-
)
|
|
18
|
+
auth_user_change_url = reverse("edc_auth_admin:auth_user_change", args=(user_id,))
|
|
21
19
|
except NoReverseMatch:
|
|
22
20
|
pass
|
|
23
21
|
return dict(
|
edc_notification/admin_site.py
CHANGED
|
@@ -2,6 +2,4 @@ from edc_model_admin.admin_site import EdcAdminSite
|
|
|
2
2
|
|
|
3
3
|
from .apps import AppConfig
|
|
4
4
|
|
|
5
|
-
edc_notification_admin = EdcAdminSite(
|
|
6
|
-
name="edc_notification_admin", app_label=AppConfig.name
|
|
7
|
-
)
|
|
5
|
+
edc_notification_admin = EdcAdminSite(name="edc_notification_admin", app_label=AppConfig.name)
|
|
@@ -81,9 +81,7 @@ class MailingListManager:
|
|
|
81
81
|
a member to the list.
|
|
82
82
|
"""
|
|
83
83
|
if not self.email_enabled:
|
|
84
|
-
raise EmailNotEnabledError(
|
|
85
|
-
"Email is not enabled. See settings.EMAIL_ENABLED"
|
|
86
|
-
)
|
|
84
|
+
raise EmailNotEnabledError("Email is not enabled. See settings.EMAIL_ENABLED")
|
|
87
85
|
if not user.email:
|
|
88
86
|
raise UserEmailError(f"User {user}'s email address is not defined.")
|
|
89
87
|
response = requests.post(
|
|
@@ -107,9 +105,7 @@ class MailingListManager:
|
|
|
107
105
|
a member from the list.
|
|
108
106
|
"""
|
|
109
107
|
if not self.email_enabled:
|
|
110
|
-
raise EmailNotEnabledError(
|
|
111
|
-
"Email is not enabled. See settings.EMAIL_ENABLED"
|
|
112
|
-
)
|
|
108
|
+
raise EmailNotEnabledError("Email is not enabled. See settings.EMAIL_ENABLED")
|
|
113
109
|
response = requests.put(
|
|
114
110
|
f"{self.api_url}/{self.address}/members/{user.email}",
|
|
115
111
|
auth=("api", self.api_key),
|
|
@@ -140,9 +136,7 @@ class MailingListManager:
|
|
|
140
136
|
def create(self, verbose: bool | None = None) -> Response:
|
|
141
137
|
"""Returns a response after attempting to create the list."""
|
|
142
138
|
if not self.email_enabled:
|
|
143
|
-
raise EmailNotEnabledError(
|
|
144
|
-
"Email is not enabled. See settings.EMAIL_ENABLED"
|
|
145
|
-
)
|
|
139
|
+
raise EmailNotEnabledError("Email is not enabled. See settings.EMAIL_ENABLED")
|
|
146
140
|
response = requests.post(
|
|
147
141
|
self.api_url,
|
|
148
142
|
auth=("api", self.api_key),
|
|
@@ -163,9 +157,7 @@ class MailingListManager:
|
|
|
163
157
|
def delete(self) -> Response:
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a member from the list.
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@@ -3,10 +3,11 @@
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import _socket
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import django_audit_fields.fields.uuid_auto_field
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import django_revision.revision_field
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from django.db import migrations, models
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import edc_model_fields.fields.hostname_modification_field
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import edc_model_fields.fields.userfield
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import edc_utils
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from django.db import migrations, models
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# Generated by Django 4.2.4 on 2023-08-23 01:13
|
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import _socket
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from django.db import migrations, models
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import django_audit_fields.fields.hostname_modification_field
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from django.db import migrations, models
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class Migration(migrations.Migration):
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migrations.AlterField(
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model_name="notification",
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name="device_created",
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field=models.CharField(blank=True, max_length=10, verbose_name="Device created"),
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),
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migrations.AlterField(
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model_name="notification",
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name="device_modified",
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),
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@@ -16,9 +16,7 @@ class NotificationModelAdminMixin:
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notifications = site_notifications.models.get(self.model._meta.label_lower)
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if notifications:
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notifications = [notification.display_name for notification in notifications]
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tooltip1 = mark_safe(", ".join(notifications)) # nosec B308 B703
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my_notifications = [
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n.display_name
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@@ -20,9 +20,7 @@ class Notification(BaseUuidModel):
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display_name = models.CharField(max_length=255, unique=True)
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mailing_list_address = models.EmailField(
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_("Mailing list address"), blank=True, null=True
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)
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mailing_list_address = models.EmailField(_("Mailing list address"), blank=True, null=True)
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enabled = models.BooleanField(default=True)
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28
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|
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@@ -20,10 +20,7 @@ def notification_on_post_create_historical_record(
|
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21
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Note, this is the post_create of the historical model.
|
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"""
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|
-
if
|
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24
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site_notifications.loaded
|
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|
-
and instance._meta.label_lower in site_notifications.models
|
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-
):
|
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|
+
if site_notifications.loaded and instance._meta.label_lower in site_notifications.models:
|
|
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|
opts = dict(
|
|
28
25
|
instance=instance,
|
|
29
26
|
user=instance.user_modified or instance.user_created,
|
|
@@ -36,12 +33,8 @@ def notification_on_post_create_historical_record(
|
|
|
36
33
|
site_notifications.notify(**opts)
|
|
37
34
|
|
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38
35
|
|
|
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|
-
@receiver(
|
|
40
|
-
|
|
41
|
-
)
|
|
42
|
-
def manage_mailists_on_userprofile_m2m_changed(
|
|
43
|
-
action, instance, pk_set, sender, **kwargs
|
|
44
|
-
):
|
|
36
|
+
@receiver(m2m_changed, weak=False, dispatch_uid="manage_mailists_on_userprofile_m2m_changed")
|
|
37
|
+
def manage_mailists_on_userprofile_m2m_changed(action, instance, pk_set, sender, **kwargs):
|
|
45
38
|
"""Updates the mail server mailing lists based on the
|
|
46
39
|
selections in the UserProfile model.
|
|
47
40
|
"""
|
|
@@ -51,9 +51,7 @@ class ModelNotification(Notification):
|
|
|
51
51
|
def __init__(self) -> None:
|
|
52
52
|
super().__init__()
|
|
53
53
|
if not self.display_name:
|
|
54
|
-
self.display_name = django_apps.get_model(
|
|
55
|
-
self.model
|
|
56
|
-
)._meta.verbose_name.title()
|
|
54
|
+
self.display_name = django_apps.get_model(self.model)._meta.verbose_name.title()
|
|
57
55
|
|
|
58
56
|
def __repr__(self) -> str:
|
|
59
57
|
return (
|
|
@@ -65,9 +63,7 @@ class ModelNotification(Notification):
|
|
|
65
63
|
def __str__(self) -> str:
|
|
66
64
|
return f"{self.name}: {self.display_name} ({self.model})"
|
|
67
65
|
|
|
68
|
-
def notify_on_condition(
|
|
69
|
-
self, instance: BaseUuidHistoryModelStub = None, **kwargs
|
|
70
|
-
) -> bool:
|
|
66
|
+
def notify_on_condition(self, instance: BaseUuidHistoryModelStub = None, **kwargs) -> bool:
|
|
71
67
|
"""Returns True if the condition in one of the C(r)UD methods is met."""
|
|
72
68
|
if instance._meta.label_lower == self.model:
|
|
73
69
|
return (
|
|
@@ -136,9 +132,7 @@ class ModelNotification(Notification):
|
|
|
136
132
|
changed_fields.update({field: values})
|
|
137
133
|
return changed_fields or None
|
|
138
134
|
|
|
139
|
-
def field_value_condition_on_update(
|
|
140
|
-
self, field, previous_value, current_value
|
|
141
|
-
) -> bool:
|
|
135
|
+
def field_value_condition_on_update(self, field, previous_value, current_value) -> bool:
|
|
142
136
|
"""Returns True if the value has changed.
|
|
143
137
|
|
|
144
138
|
Override for a more complex evaluation.
|
|
@@ -50,9 +50,7 @@ class Notification:
|
|
|
50
50
|
"Thanks."
|
|
51
51
|
)
|
|
52
52
|
email_subject_template: str = (
|
|
53
|
-
"{test_subject_line}{protocol_name}: "
|
|
54
|
-
"{display_name} "
|
|
55
|
-
"for {subject_identifier}"
|
|
53
|
+
"{test_subject_line}{protocol_name}: " "{display_name} " "for {subject_identifier}"
|
|
56
54
|
)
|
|
57
55
|
email_footer_template: str = (
|
|
58
56
|
"\n\n-----------------\n"
|
|
@@ -124,14 +122,10 @@ class Notification:
|
|
|
124
122
|
email_body_template = (
|
|
125
123
|
email_body_template or self.email_body_template
|
|
126
124
|
) + self.email_footer_template
|
|
127
|
-
email_sent = self.send_email(
|
|
128
|
-
email_body_template=email_body_template, **kwargs
|
|
129
|
-
)
|
|
125
|
+
email_sent = self.send_email(email_body_template=email_body_template, **kwargs)
|
|
130
126
|
if use_sms:
|
|
131
127
|
sms_sent = self.send_sms(**kwargs)
|
|
132
|
-
self.post_notification_actions(
|
|
133
|
-
email_sent=email_sent, sms_sent=sms_sent, **kwargs
|
|
134
|
-
)
|
|
128
|
+
self.post_notification_actions(email_sent=email_sent, sms_sent=sms_sent, **kwargs)
|
|
135
129
|
return True if email_sent or sms_sent else False
|
|
136
130
|
|
|
137
131
|
def notify_on_condition(self, **kwargs) -> bool:
|
|
@@ -199,9 +193,7 @@ class Notification:
|
|
|
199
193
|
instance=instance, test_message=test_message, **kwargs
|
|
200
194
|
),
|
|
201
195
|
email_from=self.email_from,
|
|
202
|
-
test_subject_line=(
|
|
203
|
-
self.email_test_subject_line if test_message else ""
|
|
204
|
-
).strip(),
|
|
196
|
+
test_subject_line=(self.email_test_subject_line if test_message else "").strip(),
|
|
205
197
|
test_body_line=self.email_test_body_line if test_message else "",
|
|
206
198
|
test_line=self.sms_test_line if test_message else "",
|
|
207
199
|
message_datetime=get_utcnow(),
|
|
@@ -60,9 +60,7 @@ class SiteNotifications:
|
|
|
60
60
|
if not self.loaded:
|
|
61
61
|
raise RegistryNotLoaded(self)
|
|
62
62
|
if not self._registry.get(name):
|
|
63
|
-
raise NotificationNotRegistered(
|
|
64
|
-
f"Notification not registered. Got '{name}'."
|
|
65
|
-
)
|
|
63
|
+
raise NotificationNotRegistered(f"Notification not registered. Got '{name}'.")
|
|
66
64
|
return self._registry.get(name)
|
|
67
65
|
|
|
68
66
|
def register(self, notification_cls: Type[Notification] = None):
|
|
@@ -80,9 +78,7 @@ class SiteNotifications:
|
|
|
80
78
|
models = [getattr(notification_cls, "model")]
|
|
81
79
|
for model in models:
|
|
82
80
|
try:
|
|
83
|
-
if notification_cls.name not in [
|
|
84
|
-
n.name for n in self.models[model]
|
|
85
|
-
]:
|
|
81
|
+
if notification_cls.name not in [n.name for n in self.models[model]]:
|
|
86
82
|
self.models[model].append(notification_cls)
|
|
87
83
|
except KeyError:
|
|
88
84
|
self.models.update({model: [notification_cls]})
|
|
@@ -126,9 +122,7 @@ class SiteNotifications:
|
|
|
126
122
|
notification_model_cls.objects.all().update(enabled=False)
|
|
127
123
|
if site_notifications.loaded:
|
|
128
124
|
if verbose:
|
|
129
|
-
sys.stdout.write(
|
|
130
|
-
style.MIGRATE_HEADING("Populating Notification model:\n")
|
|
131
|
-
)
|
|
125
|
+
sys.stdout.write(style.MIGRATE_HEADING("Populating Notification model:\n"))
|
|
132
126
|
self.delete_unregistered_notifications(apps=apps)
|
|
133
127
|
for name, notification_cls in site_notifications.registry.items():
|
|
134
128
|
if verbose:
|
|
@@ -166,8 +160,7 @@ class SiteNotifications:
|
|
|
166
160
|
if (
|
|
167
161
|
get_email_enabled()
|
|
168
162
|
and self.loaded
|
|
169
|
-
and settings.EMAIL_BACKEND
|
|
170
|
-
!= "django.core.mail.backends.locmem.EmailBackend"
|
|
163
|
+
and settings.EMAIL_BACKEND != "django.core.mail.backends.locmem.EmailBackend"
|
|
171
164
|
):
|
|
172
165
|
sys.stdout.write(style.MIGRATE_HEADING("Creating mailing lists:\n"))
|
|
173
166
|
for name, notification_cls in self.registry.items():
|
|
@@ -181,9 +174,7 @@ class SiteNotifications:
|
|
|
181
174
|
response = manager.create()
|
|
182
175
|
except ConnectionError as e:
|
|
183
176
|
sys.stdout.write(
|
|
184
|
-
style.ERROR(
|
|
185
|
-
f" * Failed to create mailing list {name}. " f"Got {e}\n"
|
|
186
|
-
)
|
|
177
|
+
style.ERROR(f" * Failed to create mailing list {name}. " f"Got {e}\n")
|
|
187
178
|
)
|
|
188
179
|
else:
|
|
189
180
|
if verbose:
|
|
@@ -3,13 +3,14 @@
|
|
|
3
3
|
import _socket
|
|
4
4
|
import django_audit_fields.fields.uuid_auto_field
|
|
5
5
|
import django_revision.revision_field
|
|
6
|
+
from django.db import migrations, models
|
|
7
|
+
|
|
6
8
|
import edc_model.validators.date
|
|
7
9
|
import edc_model_fields.fields.hostname_modification_field
|
|
8
10
|
import edc_model_fields.fields.other_charfield
|
|
9
11
|
import edc_model_fields.fields.userfield
|
|
10
12
|
import edc_protocol.validators
|
|
11
13
|
import edc_utils
|
|
12
|
-
from django.db import migrations, models
|
|
13
14
|
|
|
14
15
|
|
|
15
16
|
class Migration(migrations.Migration):
|
|
@@ -4,6 +4,10 @@ import _socket
|
|
|
4
4
|
import django.db.models.deletion
|
|
5
5
|
import django_audit_fields.fields.uuid_auto_field
|
|
6
6
|
import django_revision.revision_field
|
|
7
|
+
import simple_history.models
|
|
8
|
+
from django.conf import settings
|
|
9
|
+
from django.db import migrations, models
|
|
10
|
+
|
|
7
11
|
import edc_model.validators.date
|
|
8
12
|
import edc_model_fields.fields.hostname_modification_field
|
|
9
13
|
import edc_model_fields.fields.other_charfield
|
|
@@ -11,9 +15,6 @@ import edc_model_fields.fields.userfield
|
|
|
11
15
|
import edc_protocol.validators
|
|
12
16
|
import edc_sites.models
|
|
13
17
|
import edc_utils
|
|
14
|
-
import simple_history.models
|
|
15
|
-
from django.conf import settings
|
|
16
|
-
from django.db import migrations, models
|
|
17
18
|
|
|
18
19
|
|
|
19
20
|
class Migration(migrations.Migration):
|
|
@@ -1,8 +1,9 @@
|
|
|
1
1
|
# Generated by Django 2.2.6 on 2019-11-01 21:33
|
|
2
2
|
|
|
3
|
-
import edc_model_fields.fields.other_charfield
|
|
4
3
|
from django.db import migrations
|
|
5
4
|
|
|
5
|
+
import edc_model_fields.fields.other_charfield
|
|
6
|
+
|
|
6
7
|
|
|
7
8
|
class Migration(migrations.Migration):
|
|
8
9
|
dependencies = [("edc_offstudy", "0007_auto_20191024_1000")]
|
|
@@ -1,8 +1,8 @@
|
|
|
1
1
|
# Generated by Django 4.2.4 on 2023-08-23 01:13
|
|
2
2
|
|
|
3
3
|
import _socket
|
|
4
|
-
from django.db import migrations, models
|
|
5
4
|
import django_audit_fields.fields.hostname_modification_field
|
|
5
|
+
from django.db import migrations, models
|
|
6
6
|
|
|
7
7
|
|
|
8
8
|
class Migration(migrations.Migration):
|
|
@@ -14,16 +14,12 @@ class Migration(migrations.Migration):
|
|
|
14
14
|
migrations.AlterField(
|
|
15
15
|
model_name="historicalsubjectoffstudy",
|
|
16
16
|
name="device_created",
|
|
17
|
-
field=models.CharField(
|
|
18
|
-
blank=True, max_length=10, verbose_name="Device created"
|
|
19
|
-
),
|
|
17
|
+
field=models.CharField(blank=True, max_length=10, verbose_name="Device created"),
|
|
20
18
|
),
|
|
21
19
|
migrations.AlterField(
|
|
22
20
|
model_name="historicalsubjectoffstudy",
|
|
23
21
|
name="device_modified",
|
|
24
|
-
field=models.CharField(
|
|
25
|
-
blank=True, max_length=10, verbose_name="Device modified"
|
|
26
|
-
),
|
|
22
|
+
field=models.CharField(blank=True, max_length=10, verbose_name="Device modified"),
|
|
27
23
|
),
|
|
28
24
|
migrations.AlterField(
|
|
29
25
|
model_name="historicalsubjectoffstudy",
|
|
@@ -49,16 +45,12 @@ class Migration(migrations.Migration):
|
|
|
49
45
|
migrations.AlterField(
|
|
50
46
|
model_name="subjectoffstudy",
|
|
51
47
|
name="device_created",
|
|
52
|
-
field=models.CharField(
|
|
53
|
-
blank=True, max_length=10, verbose_name="Device created"
|
|
54
|
-
),
|
|
48
|
+
field=models.CharField(blank=True, max_length=10, verbose_name="Device created"),
|
|
55
49
|
),
|
|
56
50
|
migrations.AlterField(
|
|
57
51
|
model_name="subjectoffstudy",
|
|
58
52
|
name="device_modified",
|
|
59
|
-
field=models.CharField(
|
|
60
|
-
blank=True, max_length=10, verbose_name="Device modified"
|
|
61
|
-
),
|
|
53
|
+
field=models.CharField(blank=True, max_length=10, verbose_name="Device modified"),
|
|
62
54
|
),
|
|
63
55
|
migrations.AlterField(
|
|
64
56
|
model_name="subjectoffstudy",
|
|
@@ -60,9 +60,9 @@ class OffstudyModelMixin(UniqueSubjectIdentifierFieldMixin, models.Model):
|
|
|
60
60
|
)
|
|
61
61
|
|
|
62
62
|
def __str__(self):
|
|
63
|
-
dte_str = self.report_datetime.astimezone(
|
|
64
|
-
|
|
65
|
-
)
|
|
63
|
+
dte_str = self.report_datetime.astimezone(ZoneInfo(settings.TIME_ZONE)).strftime(
|
|
64
|
+
convert_php_dateformat(settings.SHORT_DATETIME_FORMAT)
|
|
65
|
+
)
|
|
66
66
|
return f"{self.subject_identifier} {dte_str}"
|
|
67
67
|
|
|
68
68
|
def save(self, *args, **kwargs):
|
|
@@ -24,9 +24,7 @@ class OffstudyCrfModelFormMixin:
|
|
|
24
24
|
the report_datetime.
|
|
25
25
|
"""
|
|
26
26
|
if self.get_subject_identifier() and self.report_datetime:
|
|
27
|
-
visit_schedule = site_visit_schedules.get_visit_schedule(
|
|
28
|
-
self.visit_schedule_name
|
|
29
|
-
)
|
|
27
|
+
visit_schedule = site_visit_schedules.get_visit_schedule(self.visit_schedule_name)
|
|
30
28
|
schedule = visit_schedule.schedules.get(self.schedule_name)
|
|
31
29
|
try:
|
|
32
30
|
offschedule_obj = schedule.offschedule_model_cls.objects.get(
|
|
@@ -36,9 +34,7 @@ class OffstudyCrfModelFormMixin:
|
|
|
36
34
|
except ObjectDoesNotExist:
|
|
37
35
|
pass
|
|
38
36
|
else:
|
|
39
|
-
offschedule_datetime = formatted_datetime(
|
|
40
|
-
offschedule_obj.offschedule_datetime
|
|
41
|
-
)
|
|
37
|
+
offschedule_datetime = formatted_datetime(offschedule_obj.offschedule_datetime)
|
|
42
38
|
raise forms.ValidationError(
|
|
43
39
|
f"Subject was taken off schedule before this report datetime. "
|
|
44
40
|
f"Got subject_identifier='{self.get_subject_identifier()}', "
|
|
@@ -8,9 +8,7 @@ register = template.Library()
|
|
|
8
8
|
|
|
9
9
|
|
|
10
10
|
@register.inclusion_tag("edc_offstudy/visit_schedule_row.html")
|
|
11
|
-
def offstudy_visit_schedule_row(
|
|
12
|
-
subject_identifier, visit_schedule, subject_dashboard_url
|
|
13
|
-
):
|
|
11
|
+
def offstudy_visit_schedule_row(subject_identifier, visit_schedule, subject_dashboard_url):
|
|
14
12
|
context = {}
|
|
15
13
|
offstudy_model = visit_schedule.offstudy_model
|
|
16
14
|
offstudy_model_cls = django_apps.get_model(offstudy_model)
|
|
@@ -21,9 +19,7 @@ def offstudy_visit_schedule_row(
|
|
|
21
19
|
else:
|
|
22
20
|
options = dict(subject_identifier=subject_identifier)
|
|
23
21
|
query = unquote(urlencode(options))
|
|
24
|
-
href = (
|
|
25
|
-
f"{obj.get_absolute_url()}?next={subject_dashboard_url},subject_identifier"
|
|
26
|
-
)
|
|
22
|
+
href = f"{obj.get_absolute_url()}?next={subject_dashboard_url},subject_identifier"
|
|
27
23
|
href = "&".join([href, query])
|
|
28
24
|
context = dict(
|
|
29
25
|
offstudy_datetime=obj.offstudy_datetime,
|
edc_offstudy/utils.py
CHANGED
|
@@ -48,9 +48,7 @@ def raise_if_offstudy(
|
|
|
48
48
|
except ObjectDoesNotExist:
|
|
49
49
|
pass
|
|
50
50
|
else:
|
|
51
|
-
msg_part =
|
|
52
|
-
f"Source model `{source_obj._meta.verbose_name}`." if source_obj else ""
|
|
53
|
-
)
|
|
51
|
+
msg_part = f"Source model `{source_obj._meta.verbose_name}`." if source_obj else ""
|
|
54
52
|
raise OffstudyError(
|
|
55
53
|
"Subject off study by given date/time. "
|
|
56
54
|
f"Got report_datetime=`{formatted_datetime(report_datetime)}` "
|
|
@@ -22,6 +22,4 @@ class PdfButtonModelAdminMixin:
|
|
|
22
22
|
title=self.pdf_button_title,
|
|
23
23
|
url_name=self.pdf_button_url_name,
|
|
24
24
|
)
|
|
25
|
-
return render_to_string(
|
|
26
|
-
template_name=self.pdf_button_template_name, context=context
|
|
27
|
-
)
|
|
25
|
+
return render_to_string(template_name=self.pdf_button_template_name, context=context)
|
|
@@ -97,9 +97,7 @@ class CrfPdfReport(Report):
|
|
|
97
97
|
f"Got {self.model_obj}."
|
|
98
98
|
)
|
|
99
99
|
if not self.changelist_url:
|
|
100
|
-
raise CrfPdfReportError(
|
|
101
|
-
f"Invalid changelist url. Got {self.changelist_url}."
|
|
102
|
-
)
|
|
100
|
+
raise CrfPdfReportError(f"Invalid changelist url. Got {self.changelist_url}.")
|
|
103
101
|
|
|
104
102
|
self.user_model_cls = get_user_model()
|
|
105
103
|
self.user = self.request.user if self.request else user
|
|
@@ -195,9 +193,7 @@ class CrfPdfReport(Report):
|
|
|
195
193
|
],
|
|
196
194
|
[
|
|
197
195
|
"Randomization date:",
|
|
198
|
-
self.registered_subject.randomization_datetime.strftime(
|
|
199
|
-
"%Y-%m-%d %H:%M"
|
|
200
|
-
),
|
|
196
|
+
self.registered_subject.randomization_datetime.strftime("%Y-%m-%d %H:%M"),
|
|
201
197
|
],
|
|
202
198
|
["Assignment:", assignment],
|
|
203
199
|
]
|
|
@@ -252,9 +248,7 @@ class CrfPdfReport(Report):
|
|
|
252
248
|
@property
|
|
253
249
|
def logo(self):
|
|
254
250
|
if not self._logo:
|
|
255
|
-
path = get_static_file(
|
|
256
|
-
self.logo_data["app_label"], self.logo_data["filename"]
|
|
257
|
-
)
|
|
251
|
+
path = get_static_file(self.logo_data["app_label"], self.logo_data["filename"])
|
|
258
252
|
if os.path.isfile(path):
|
|
259
253
|
self._logo = ImageReader(path)
|
|
260
254
|
return self._logo
|
|
@@ -32,9 +32,7 @@ class TextboxFlowable(Flowable):
|
|
|
32
32
|
y=y,
|
|
33
33
|
width=width * 0.6,
|
|
34
34
|
height=height * 0.4,
|
|
35
|
-
borderStyle=(
|
|
36
|
-
self.borderStyle if self.borderStyle != "underlined" else "none"
|
|
37
|
-
),
|
|
35
|
+
borderStyle=(self.borderStyle if self.borderStyle != "underlined" else "none"),
|
|
38
36
|
fillColor=colors.white,
|
|
39
37
|
textColor=colors.black,
|
|
40
38
|
forceBorder=True,
|
edc_pdf_reports/report.py
CHANGED
|
@@ -28,9 +28,7 @@ class ReportError(Exception):
|
|
|
28
28
|
|
|
29
29
|
class Report(ABC):
|
|
30
30
|
document_template = SimpleDocTemplate
|
|
31
|
-
watermark_word: str | None = getattr(
|
|
32
|
-
settings, "EDC_PDF_REPORTS_WATERMARK_WORD", None
|
|
33
|
-
)
|
|
31
|
+
watermark_word: str | None = getattr(settings, "EDC_PDF_REPORTS_WATERMARK_WORD", None)
|
|
34
32
|
watermark_font: tuple[str, int] | None = getattr(
|
|
35
33
|
settings, "EDC_PDF_REPORTS_WATERMARK_FONT", ("Helvetica", 100)
|
|
36
34
|
)
|
|
@@ -144,9 +142,7 @@ class Report(ABC):
|
|
|
144
142
|
styles.add(ParagraphStyle(name="right", alignment=TA_RIGHT))
|
|
145
143
|
styles.add(ParagraphStyle(name="left", alignment=TA_LEFT))
|
|
146
144
|
styles.add(
|
|
147
|
-
ParagraphStyle(
|
|
148
|
-
name="line_data", alignment=TA_LEFT, fontSize=8, leading=10
|
|
149
|
-
)
|
|
145
|
+
ParagraphStyle(name="line_data", alignment=TA_LEFT, fontSize=8, leading=10)
|
|
150
146
|
)
|
|
151
147
|
styles.add(
|
|
152
148
|
ParagraphStyle(
|
|
@@ -186,24 +182,16 @@ class Report(ABC):
|
|
|
186
182
|
)
|
|
187
183
|
)
|
|
188
184
|
styles.add(
|
|
189
|
-
ParagraphStyle(
|
|
190
|
-
name="line_label", fontSize=7, leading=6, alignment=TA_LEFT
|
|
191
|
-
)
|
|
185
|
+
ParagraphStyle(name="line_label", fontSize=7, leading=6, alignment=TA_LEFT)
|
|
192
186
|
)
|
|
193
187
|
styles.add(
|
|
194
|
-
ParagraphStyle(
|
|
195
|
-
name="line_label_center", fontSize=7, alignment=TA_CENTER
|
|
196
|
-
)
|
|
188
|
+
ParagraphStyle(name="line_label_center", fontSize=7, alignment=TA_CENTER)
|
|
197
189
|
)
|
|
198
190
|
styles.add(
|
|
199
|
-
ParagraphStyle(
|
|
200
|
-
name="row_header", fontSize=8, leading=8, alignment=TA_CENTER
|
|
201
|
-
)
|
|
191
|
+
ParagraphStyle(name="row_header", fontSize=8, leading=8, alignment=TA_CENTER)
|
|
202
192
|
)
|
|
203
193
|
styles.add(
|
|
204
|
-
ParagraphStyle(
|
|
205
|
-
name="row_data", fontSize=7, leading=7, alignment=TA_CENTER
|
|
206
|
-
)
|
|
194
|
+
ParagraphStyle(name="row_data", fontSize=7, leading=7, alignment=TA_CENTER)
|
|
207
195
|
)
|
|
208
196
|
self._styles = self.add_to_styles(styles)
|
|
209
197
|
return self._styles
|