celldetective 1.3.8__py3-none-any.whl → 1.3.9__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- celldetective/_version.py +1 -1
- celldetective/extra_properties.py +113 -17
- celldetective/filters.py +12 -12
- celldetective/gui/btrack_options.py +1 -1
- celldetective/gui/control_panel.py +1 -1
- celldetective/gui/gui_utils.py +4 -4
- celldetective/gui/measurement_options.py +1 -1
- celldetective/gui/plot_signals_ui.py +23 -6
- celldetective/gui/process_block.py +1 -1
- celldetective/gui/processes/measure_cells.py +4 -4
- celldetective/gui/processes/segment_cells.py +3 -3
- celldetective/gui/processes/track_cells.py +4 -4
- celldetective/gui/signal_annotator.py +26 -6
- celldetective/gui/signal_annotator2.py +1 -1
- celldetective/gui/signal_annotator_options.py +1 -1
- celldetective/gui/survival_ui.py +4 -1
- celldetective/gui/thresholds_gui.py +6 -5
- celldetective/io.py +1 -44
- celldetective/links/zenodo.json +233 -93
- celldetective/measure.py +22 -16
- celldetective/models/signal_detection/NucCond/classification_loss.png +0 -0
- celldetective/models/signal_detection/NucCond/classifier.h5 +0 -0
- celldetective/models/signal_detection/NucCond/config_input.json +1 -0
- celldetective/models/signal_detection/NucCond/log_classifier.csv +126 -0
- celldetective/models/signal_detection/NucCond/log_regressor.csv +282 -0
- celldetective/models/signal_detection/NucCond/regression_loss.png +0 -0
- celldetective/models/signal_detection/NucCond/regressor.h5 +0 -0
- celldetective/models/signal_detection/NucCond/scores.npy +0 -0
- celldetective/models/signal_detection/NucCond/test_confusion_matrix.png +0 -0
- celldetective/models/signal_detection/NucCond/test_regression.png +0 -0
- celldetective/models/signal_detection/NucCond/validation_confusion_matrix.png +0 -0
- celldetective/models/signal_detection/NucCond/validation_regression.png +0 -0
- celldetective/regionprops/__init__.py +1 -0
- celldetective/regionprops/_regionprops.py +310 -0
- celldetective/regionprops/props.json +63 -0
- celldetective/scripts/measure_relative.py +2 -20
- celldetective/segmentation.py +14 -4
- celldetective/utils.py +182 -171
- {celldetective-1.3.8.dist-info → celldetective-1.3.9.dist-info}/METADATA +1 -1
- {celldetective-1.3.8.dist-info → celldetective-1.3.9.dist-info}/RECORD +44 -29
- {celldetective-1.3.8.dist-info → celldetective-1.3.9.dist-info}/LICENSE +0 -0
- {celldetective-1.3.8.dist-info → celldetective-1.3.9.dist-info}/WHEEL +0 -0
- {celldetective-1.3.8.dist-info → celldetective-1.3.9.dist-info}/entry_points.txt +0 -0
- {celldetective-1.3.8.dist-info → celldetective-1.3.9.dist-info}/top_level.txt +0 -0
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celldetective/__init__.py,sha256=bi3SGTMo6s2qQBsJAaKy-a4xaGcTQVW8zsqaiX5XKeY,139
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celldetective/__main__.py,sha256=bxTlSvbKhqn3LW_azd2baDCnDsgb37PAP9DfuAJ1_5M,1844
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celldetective/_version.py,sha256=
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celldetective/_version.py,sha256=SaWgUI6v92kVfF_Qdoxbfc38bwA34RuDGZmXMqa5g3c,22
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celldetective/events.py,sha256=UkjY_-THo6WviWWCLnDbma7jWOd_O9a60C4IOX2htG8,8254
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celldetective/extra_properties.py,sha256=
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celldetective/measure.py,sha256=
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celldetective/extra_properties.py,sha256=PUs-lltSj_jSko_Gd-w483OxZW6oR3BAHQrw51DUxMg,8081
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celldetective/filters.py,sha256=6pl2IGPK2FH8KPWbjzQEbT4C-ruqE1fQ8NQNN7Euvy8,4433
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celldetective/io.py,sha256=HEy9KbidrPVbzzbC1kJcXR0TsvIxNgRiDk31ecdjxpE,121954
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celldetective/measure.py,sha256=h1F08Vf7sy-20syMFZTUl1lHzE4h6cQvswJpwD9fcfE,58475
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celldetective/neighborhood.py,sha256=s-zVsfGnPlqs6HlDJCXRh21lLiPKbA_S1JC6uZvfG_0,56712
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celldetective/preprocessing.py,sha256=Wlt_PJua97CpMuWe_M65znUmz_yjYPqWIcs2ZK_RLgk,44109
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celldetective/relative_measurements.py,sha256=-GWig0lC5UWAcJSPlo9Sp45khGj80fxuQfFk-bdBca0,30117
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celldetective/segmentation.py,sha256=
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celldetective/segmentation.py,sha256=WApzoU1s3Ntvp0eIw_pRZXNwCA8LDKC9YoyR52tioz4,30943
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celldetective/signals.py,sha256=nMyyGUpla8D2sUYKY1zjbWsAueVPI_gUalY0KXfWteI,111595
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celldetective/tracking.py,sha256=VBJLd-1EeJarOVPBNEomhVBh9UYAMdSnH0tmUiUoTrY,40242
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celldetective/utils.py,sha256=
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celldetective/utils.py,sha256=RoNkCGCs9V3EiIn63N20qNKBQ_-H9bogF5LgByQ2UZo,106316
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celldetective/datasets/segmentation_annotations/blank,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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celldetective/gui/InitWindow.py,sha256=TPKWYczhPHvPKWg654sXnE9xCEx6U-oWX0_OJgLTWbU,15044
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celldetective/gui/__init__.py,sha256=2_r2xfOj4_2xj0yBkCTIfzlF94AHKm-j6Pvpd7DddQc,989
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celldetective/gui/about.py,sha256=FJZrj6C-p6uqp_3UaprKosuW-Sw9_HPNQAvFbis9Gdk,1749
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celldetective/gui/analyze_block.py,sha256=h0sp7Tk3hZFM8w0yTidwIjZX4WRI-lQF3JCFObrLCPo,2761
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celldetective/gui/btrack_options.py,sha256=F2wrhuaNSaBr6vNApI22XSjdI5Cl3q138qCYBk-FDu4,44684
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celldetective/gui/classifier_widget.py,sha256=nHWmaWXse2CxxRFmR4mA0JRADr5i0MsWldaqJQIQ-i8,19992
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celldetective/gui/configure_new_exp.py,sha256=N4SdL-4Xo0XbTAkCtt1ywr74HmHc5eaPlHGv1XgxAX0,20772
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celldetective/gui/control_panel.py,sha256=jFpedm03x6_jKabeadsNiigKnlh7sXCkulwe4gMCJaM,22042
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celldetective/gui/generic_signal_plot.py,sha256=Gv4KhA5vhbgVSj5jteE42T0aNCoQZtmIAUkEsMi6JNA,36309
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celldetective/gui/gui_utils.py,sha256=lF3YqMecN_xEyFN_MS0j2KWYZoCnOvMmZeMj4lTRFu4,39335
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celldetective/gui/json_readers.py,sha256=SkI_bR1MlAKd8NLBmQUVjJfZ7mKiU_FEjgC4dUwBACk,3698
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celldetective/gui/layouts.py,sha256=XsqiHR58DXsG5SSD5S8KOtUv4yw-y-s2_wZx_XsHeJs,52013
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celldetective/gui/neighborhood_options.py,sha256=FBNDvlzMPKp8s0Grxds90pCPHG1s27XrpMN0HV2gf0I,19839
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celldetective/gui/plot_measurements.py,sha256=n0pDUcYcsKlSMaUaBSVplGziuWp_7jKaeXdREs-MqyI,50848
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celldetective/gui/plot_signals_ui.py,sha256=7jCu-wLk_NDL4ThLZwhltODngre8iqPMUcEhJNNllo8,18189
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celldetective/gui/process_block.py,sha256=dH0zHIEouL8ApAD4uN7IR9dSl8X8QqE-hXL6U7HZHaM,71212
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celldetective/gui/retrain_segmentation_model_options.py,sha256=7iawDN4kwq56Z-dX9kQe9tLW8B3YMrIW_D85LMAAYwk,23906
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celldetective/gui/retrain_signal_model_options.py,sha256=GCa0WKKsgmH2CFDHAKxPGbHtCE19p1_bbcWNasyZw5o,22482
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celldetective/gui/seg_model_loader.py,sha256=b1BiHuAf_ZqroE4jSEVCo7ASQv-xyWMPWU799alpbNM,19727
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celldetective/gui/signal_annotator.py,sha256=lf15PWZoWx2S1qZtrMsbBeZKtwVEKTjwwyIIG-XHdQA,89541
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celldetective/gui/signal_annotator2.py,sha256=RhcMX32FH_zg8GgAofGIyda9H8euSFADau301qi1NU0,106342
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celldetective/gui/signal_annotator_options.py,sha256=Tq20tybpelHFUqFCSemqH9es2FqM8S3I6Fab-u0FK0A,11015
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celldetective/gui/styles.py,sha256=SZy_ACkA6QB_4ANyY1V0m1QF66C0SVGssOrwW1Qt1Aw,5076
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celldetective/gui/survival_ui.py,sha256=Q-530cAK-SsKPr8sWFTbhGekB2CFLWd0SNjtV1Wr0oo,14202
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celldetective/gui/tableUI.py,sha256=Yz_pHk1ERXRb0QsBPrvLEwAGpvVlawgn1b6uzz5wL_0,58022
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celldetective/gui/thresholds_gui.py,sha256=O7NkeaPV1nnQdTbduXd3lMttWPBzKcJ-9jI5OMr8H-0,48808
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celldetective/gui/viewers.py,sha256=HDLB6j1FJwgKR6dQwzeHmcDvDMbDIYwD2svd-VZhJFE,47806
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celldetective/gui/help/DL-segmentation-strategy.json,sha256=PZD9xXjrwbX3TiudHJPuvcyZD28o4k-fVgeTd7dBKzI,1583
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celldetective/gui/processes/downloader.py,sha256=SuMTuM82QOZBqLfj36I14fhZ2k3NmLp0PBcGUHxnpXI,3287
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celldetective/gui/processes/measure_cells.py,sha256=MLkVLLuUtVVgwQB9a9N8eZ5TzF-Xtuhzb5wtcFRa1lU,12846
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celldetective/gui/processes/segment_cells.py,sha256=49Bh3nejkrxlLNhlP3Y_6-flkBOhkqFMQmrc2qDj7Dk,11320
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celldetective/gui/processes/track_cells.py,sha256=y8ohHAMcGtAjrJOP1WqvDfy_K85LbmdXoN7CA7BYpaY,9942
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celldetective/gui/processes/train_segmentation_model.py,sha256=bvcPG19hBjhNY9hd6Ch5_wk2FOJYQg97Azoz4RKeP-0,10776
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celldetective/gui/processes/train_signal_model.py,sha256=qqqkq9gdvNyvycYkmzWgRXWvsbEozyzNWP_POGvnlIs,3816
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celldetective/icons/logo-large.png,sha256=FXSwV3u6zEKcfpuSn4unnqB0oUnN9cHqQ9BCKWytrpg,36631
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celldetective/icons/vignette_signals2.svg,sha256=muGNcQudV1jG-bmFd9FwV-Wb8PcrRV5osdZ7pHR7Ekk,5947
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celldetective/models/segmentation_effectors/ricm_bf_all_last/config_input.json,sha256=Sr5AiyJkg_EoAUFSZbUH_FE-jQHTwNR3tiUZdmvPlaA,7068
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celldetective/scripts/measure_cells.py,sha256=GvuHrSb3S-JnUjBaACx84BhUd_vUrwEHiSgDV9BoXXE,11766
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celldetective/scripts/measure_relative.py,sha256=
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celldetective/scripts/measure_relative.py,sha256=wI7ibgWCsh5NVfcYum9LK0khL7cwKyCxwHFaXG4oWjM,3698
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celldetective/scripts/segment_cells.py,sha256=AZfHqig0WBMkAh9ho7JHmjM9vMO-EiPVviTHJcDj5Mw,6954
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celldetective/scripts/segment_cells_thresholds.py,sha256=lsW5hsHenNPiyIwZuZHipeCN2Wer69VcLko5rS96GAU,5118
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celldetective/scripts/track_cells.py,sha256=_OPfn9BsbvdpAU4dg36SXmOTx_BkDkZL4N05X0_Tig4,8795
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tests/test_signals.py,sha256=No4cah6KxplhDcKXnU8RrA7eDla4hWw6ccf7xGnBokU,3599
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tests/test_tracking.py,sha256=8hebWSqEIuttD1ABn-6dKCT7EXKRR7-4RwyFWi1WPFo,8800
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tests/test_utils.py,sha256=NKRCAC1d89aBK5cWjTb7-pInYow901RrT-uBlIdz4KI,3692
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celldetective-1.3.
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celldetective-1.3.9.dist-info/LICENSE,sha256=OXLcl0T2SZ8Pmy2_dmlvKuetivmyPd5m1q-Gyd-zaYY,35149
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celldetective-1.3.9.dist-info/METADATA,sha256=POcWapSbuacLCmplgT1JURcBQIQ25jNSigcN5ltnx5s,10747
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celldetective-1.3.9.dist-info/WHEEL,sha256=In9FTNxeP60KnTkGw7wk6mJPYd_dQSjEZmXdBdMCI-8,91
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celldetective-1.3.9.dist-info/entry_points.txt,sha256=2NU6_EOByvPxqBbCvjwxlVlvnQreqZ3BKRCVIKEv3dg,62
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celldetective-1.3.9.dist-info/top_level.txt,sha256=6rsIKKfGMKgud7HPuATcpq6EhdXwcg_yknBVWn9x4C4,20
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celldetective-1.3.9.dist-info/RECORD,,
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