cars 1.0.0rc1__cp313-cp313-musllinux_1_2_i686.whl

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  1. cars/__init__.py +74 -0
  2. cars/applications/__init__.py +37 -0
  3. cars/applications/application.py +117 -0
  4. cars/applications/application_constants.py +29 -0
  5. cars/applications/application_template.py +146 -0
  6. cars/applications/auxiliary_filling/__init__.py +29 -0
  7. cars/applications/auxiliary_filling/abstract_auxiliary_filling_app.py +104 -0
  8. cars/applications/auxiliary_filling/auxiliary_filling_algo.py +475 -0
  9. cars/applications/auxiliary_filling/auxiliary_filling_from_sensors_app.py +630 -0
  10. cars/applications/auxiliary_filling/auxiliary_filling_wrappers.py +90 -0
  11. cars/applications/dem_generation/__init__.py +30 -0
  12. cars/applications/dem_generation/abstract_dem_generation_app.py +116 -0
  13. cars/applications/dem_generation/bulldozer_config/base_config.yaml +42 -0
  14. cars/applications/dem_generation/bulldozer_dem_app.py +655 -0
  15. cars/applications/dem_generation/bulldozer_memory.py +55 -0
  16. cars/applications/dem_generation/dem_generation_algo.py +107 -0
  17. cars/applications/dem_generation/dem_generation_constants.py +32 -0
  18. cars/applications/dem_generation/dem_generation_wrappers.py +323 -0
  19. cars/applications/dense_match_filling/__init__.py +30 -0
  20. cars/applications/dense_match_filling/abstract_dense_match_filling_app.py +242 -0
  21. cars/applications/dense_match_filling/fill_disp_algo.py +113 -0
  22. cars/applications/dense_match_filling/fill_disp_constants.py +39 -0
  23. cars/applications/dense_match_filling/fill_disp_wrappers.py +83 -0
  24. cars/applications/dense_match_filling/zero_padding_app.py +302 -0
  25. cars/applications/dense_matching/__init__.py +30 -0
  26. cars/applications/dense_matching/abstract_dense_matching_app.py +261 -0
  27. cars/applications/dense_matching/census_mccnn_sgm_app.py +1460 -0
  28. cars/applications/dense_matching/cpp/__init__.py +0 -0
  29. cars/applications/dense_matching/cpp/dense_matching_cpp.cpython-313-i386-linux-musl.so +0 -0
  30. cars/applications/dense_matching/cpp/dense_matching_cpp.py +94 -0
  31. cars/applications/dense_matching/cpp/includes/dense_matching.hpp +58 -0
  32. cars/applications/dense_matching/cpp/meson.build +9 -0
  33. cars/applications/dense_matching/cpp/src/bindings.cpp +13 -0
  34. cars/applications/dense_matching/cpp/src/dense_matching.cpp +207 -0
  35. cars/applications/dense_matching/dense_matching_algo.py +401 -0
  36. cars/applications/dense_matching/dense_matching_constants.py +89 -0
  37. cars/applications/dense_matching/dense_matching_wrappers.py +951 -0
  38. cars/applications/dense_matching/disparity_grid_algo.py +588 -0
  39. cars/applications/dense_matching/loaders/__init__.py +23 -0
  40. cars/applications/dense_matching/loaders/config_census_sgm_default.json +31 -0
  41. cars/applications/dense_matching/loaders/config_census_sgm_homogeneous.json +30 -0
  42. cars/applications/dense_matching/loaders/config_census_sgm_mountain_and_vegetation.json +30 -0
  43. cars/applications/dense_matching/loaders/config_census_sgm_shadow.json +30 -0
  44. cars/applications/dense_matching/loaders/config_census_sgm_sparse.json +36 -0
  45. cars/applications/dense_matching/loaders/config_census_sgm_urban.json +30 -0
  46. cars/applications/dense_matching/loaders/config_mapping.json +13 -0
  47. cars/applications/dense_matching/loaders/config_mccnn.json +28 -0
  48. cars/applications/dense_matching/loaders/global_land_cover_map.tif +0 -0
  49. cars/applications/dense_matching/loaders/pandora_loader.py +593 -0
  50. cars/applications/dsm_filling/__init__.py +32 -0
  51. cars/applications/dsm_filling/abstract_dsm_filling_app.py +101 -0
  52. cars/applications/dsm_filling/border_interpolation_app.py +270 -0
  53. cars/applications/dsm_filling/bulldozer_config/base_config.yaml +44 -0
  54. cars/applications/dsm_filling/bulldozer_filling_app.py +279 -0
  55. cars/applications/dsm_filling/exogenous_filling_app.py +333 -0
  56. cars/applications/grid_generation/__init__.py +30 -0
  57. cars/applications/grid_generation/abstract_grid_generation_app.py +142 -0
  58. cars/applications/grid_generation/epipolar_grid_generation_app.py +327 -0
  59. cars/applications/grid_generation/grid_correction_app.py +496 -0
  60. cars/applications/grid_generation/grid_generation_algo.py +388 -0
  61. cars/applications/grid_generation/grid_generation_constants.py +46 -0
  62. cars/applications/grid_generation/transform_grid.py +88 -0
  63. cars/applications/ground_truth_reprojection/__init__.py +30 -0
  64. cars/applications/ground_truth_reprojection/abstract_ground_truth_reprojection_app.py +137 -0
  65. cars/applications/ground_truth_reprojection/direct_localization_app.py +629 -0
  66. cars/applications/ground_truth_reprojection/ground_truth_reprojection_algo.py +275 -0
  67. cars/applications/point_cloud_outlier_removal/__init__.py +30 -0
  68. cars/applications/point_cloud_outlier_removal/abstract_outlier_removal_app.py +385 -0
  69. cars/applications/point_cloud_outlier_removal/outlier_removal_algo.py +392 -0
  70. cars/applications/point_cloud_outlier_removal/outlier_removal_constants.py +43 -0
  71. cars/applications/point_cloud_outlier_removal/small_components_app.py +527 -0
  72. cars/applications/point_cloud_outlier_removal/statistical_app.py +531 -0
  73. cars/applications/rasterization/__init__.py +30 -0
  74. cars/applications/rasterization/abstract_pc_rasterization_app.py +183 -0
  75. cars/applications/rasterization/rasterization_algo.py +534 -0
  76. cars/applications/rasterization/rasterization_constants.py +38 -0
  77. cars/applications/rasterization/rasterization_wrappers.py +634 -0
  78. cars/applications/rasterization/simple_gaussian_app.py +1152 -0
  79. cars/applications/resampling/__init__.py +28 -0
  80. cars/applications/resampling/abstract_resampling_app.py +187 -0
  81. cars/applications/resampling/bicubic_resampling_app.py +762 -0
  82. cars/applications/resampling/resampling_algo.py +614 -0
  83. cars/applications/resampling/resampling_constants.py +36 -0
  84. cars/applications/resampling/resampling_wrappers.py +309 -0
  85. cars/applications/sparse_matching/__init__.py +30 -0
  86. cars/applications/sparse_matching/abstract_sparse_matching_app.py +498 -0
  87. cars/applications/sparse_matching/sift_app.py +735 -0
  88. cars/applications/sparse_matching/sparse_matching_algo.py +360 -0
  89. cars/applications/sparse_matching/sparse_matching_constants.py +68 -0
  90. cars/applications/sparse_matching/sparse_matching_wrappers.py +238 -0
  91. cars/applications/triangulation/__init__.py +32 -0
  92. cars/applications/triangulation/abstract_triangulation_app.py +227 -0
  93. cars/applications/triangulation/line_of_sight_intersection_app.py +1243 -0
  94. cars/applications/triangulation/pc_transform.py +552 -0
  95. cars/applications/triangulation/triangulation_algo.py +371 -0
  96. cars/applications/triangulation/triangulation_constants.py +38 -0
  97. cars/applications/triangulation/triangulation_wrappers.py +259 -0
  98. cars/bundleadjustment.py +757 -0
  99. cars/cars.py +177 -0
  100. cars/conf/__init__.py +23 -0
  101. cars/conf/geoid/egm96.grd +0 -0
  102. cars/conf/geoid/egm96.grd.hdr +15 -0
  103. cars/conf/input_parameters.py +156 -0
  104. cars/conf/mask_cst.py +35 -0
  105. cars/core/__init__.py +23 -0
  106. cars/core/cars_logging.py +402 -0
  107. cars/core/constants.py +191 -0
  108. cars/core/constants_disparity.py +50 -0
  109. cars/core/datasets.py +140 -0
  110. cars/core/geometry/__init__.py +27 -0
  111. cars/core/geometry/abstract_geometry.py +1119 -0
  112. cars/core/geometry/shareloc_geometry.py +598 -0
  113. cars/core/inputs.py +568 -0
  114. cars/core/outputs.py +176 -0
  115. cars/core/preprocessing.py +722 -0
  116. cars/core/projection.py +843 -0
  117. cars/core/roi_tools.py +215 -0
  118. cars/core/tiling.py +774 -0
  119. cars/core/utils.py +164 -0
  120. cars/data_structures/__init__.py +23 -0
  121. cars/data_structures/cars_dataset.py +1541 -0
  122. cars/data_structures/cars_dict.py +74 -0
  123. cars/data_structures/corresponding_tiles_tools.py +186 -0
  124. cars/data_structures/dataframe_converter.py +185 -0
  125. cars/data_structures/format_transformation.py +297 -0
  126. cars/devibrate.py +689 -0
  127. cars/extractroi.py +264 -0
  128. cars/orchestrator/__init__.py +23 -0
  129. cars/orchestrator/achievement_tracker.py +125 -0
  130. cars/orchestrator/cluster/__init__.py +37 -0
  131. cars/orchestrator/cluster/abstract_cluster.py +244 -0
  132. cars/orchestrator/cluster/abstract_dask_cluster.py +375 -0
  133. cars/orchestrator/cluster/dask_cluster_tools.py +103 -0
  134. cars/orchestrator/cluster/dask_config/README.md +94 -0
  135. cars/orchestrator/cluster/dask_config/dask.yaml +21 -0
  136. cars/orchestrator/cluster/dask_config/distributed.yaml +70 -0
  137. cars/orchestrator/cluster/dask_config/jobqueue.yaml +26 -0
  138. cars/orchestrator/cluster/dask_config/reference_confs/dask-schema.yaml +137 -0
  139. cars/orchestrator/cluster/dask_config/reference_confs/dask.yaml +26 -0
  140. cars/orchestrator/cluster/dask_config/reference_confs/distributed-schema.yaml +1009 -0
  141. cars/orchestrator/cluster/dask_config/reference_confs/distributed.yaml +273 -0
  142. cars/orchestrator/cluster/dask_config/reference_confs/jobqueue.yaml +212 -0
  143. cars/orchestrator/cluster/dask_jobqueue_utils.py +204 -0
  144. cars/orchestrator/cluster/local_dask_cluster.py +116 -0
  145. cars/orchestrator/cluster/log_wrapper.py +1075 -0
  146. cars/orchestrator/cluster/mp_cluster/__init__.py +27 -0
  147. cars/orchestrator/cluster/mp_cluster/mp_factorizer.py +212 -0
  148. cars/orchestrator/cluster/mp_cluster/mp_objects.py +535 -0
  149. cars/orchestrator/cluster/mp_cluster/mp_tools.py +93 -0
  150. cars/orchestrator/cluster/mp_cluster/mp_wrapper.py +505 -0
  151. cars/orchestrator/cluster/mp_cluster/multiprocessing_cluster.py +873 -0
  152. cars/orchestrator/cluster/mp_cluster/multiprocessing_profiler.py +399 -0
  153. cars/orchestrator/cluster/pbs_dask_cluster.py +207 -0
  154. cars/orchestrator/cluster/sequential_cluster.py +139 -0
  155. cars/orchestrator/cluster/slurm_dask_cluster.py +234 -0
  156. cars/orchestrator/orchestrator.py +905 -0
  157. cars/orchestrator/orchestrator_constants.py +29 -0
  158. cars/orchestrator/registry/__init__.py +23 -0
  159. cars/orchestrator/registry/abstract_registry.py +143 -0
  160. cars/orchestrator/registry/compute_registry.py +106 -0
  161. cars/orchestrator/registry/id_generator.py +116 -0
  162. cars/orchestrator/registry/replacer_registry.py +213 -0
  163. cars/orchestrator/registry/saver_registry.py +363 -0
  164. cars/orchestrator/registry/unseen_registry.py +118 -0
  165. cars/orchestrator/tiles_profiler.py +279 -0
  166. cars/pipelines/__init__.py +26 -0
  167. cars/pipelines/conf_resolution/conf_final_resolution.yaml +5 -0
  168. cars/pipelines/conf_resolution/conf_first_resolution.yaml +2 -0
  169. cars/pipelines/conf_resolution/conf_intermediate_resolution.yaml +2 -0
  170. cars/pipelines/default/__init__.py +26 -0
  171. cars/pipelines/default/default_pipeline.py +786 -0
  172. cars/pipelines/parameters/__init__.py +0 -0
  173. cars/pipelines/parameters/advanced_parameters.py +417 -0
  174. cars/pipelines/parameters/advanced_parameters_constants.py +69 -0
  175. cars/pipelines/parameters/application_parameters.py +71 -0
  176. cars/pipelines/parameters/depth_map_inputs.py +0 -0
  177. cars/pipelines/parameters/dsm_inputs.py +918 -0
  178. cars/pipelines/parameters/dsm_inputs_constants.py +25 -0
  179. cars/pipelines/parameters/output_constants.py +52 -0
  180. cars/pipelines/parameters/output_parameters.py +454 -0
  181. cars/pipelines/parameters/sensor_inputs.py +842 -0
  182. cars/pipelines/parameters/sensor_inputs_constants.py +49 -0
  183. cars/pipelines/parameters/sensor_loaders/__init__.py +29 -0
  184. cars/pipelines/parameters/sensor_loaders/basic_classif_loader.py +86 -0
  185. cars/pipelines/parameters/sensor_loaders/basic_image_loader.py +98 -0
  186. cars/pipelines/parameters/sensor_loaders/pivot_classif_loader.py +90 -0
  187. cars/pipelines/parameters/sensor_loaders/pivot_image_loader.py +105 -0
  188. cars/pipelines/parameters/sensor_loaders/sensor_loader.py +93 -0
  189. cars/pipelines/parameters/sensor_loaders/sensor_loader_template.py +71 -0
  190. cars/pipelines/parameters/sensor_loaders/slurp_classif_loader.py +86 -0
  191. cars/pipelines/pipeline.py +119 -0
  192. cars/pipelines/pipeline_constants.py +31 -0
  193. cars/pipelines/pipeline_template.py +139 -0
  194. cars/pipelines/unit/__init__.py +26 -0
  195. cars/pipelines/unit/unit_pipeline.py +2850 -0
  196. cars/starter.py +167 -0
  197. cars-1.0.0rc1.dist-info/METADATA +292 -0
  198. cars-1.0.0rc1.dist-info/RECORD +202 -0
  199. cars-1.0.0rc1.dist-info/WHEEL +5 -0
  200. cars-1.0.0rc1.dist-info/entry_points.txt +8 -0
  201. cars.libs/libgcc_s-1257a076.so.1 +0 -0
  202. cars.libs/libstdc++-0530927c.so.6.0.32 +0 -0
@@ -0,0 +1,27 @@
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+ #!/usr/bin/env python
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+ # coding: utf8
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+ #
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+ # Copyright (c) 2020 Centre National d'Etudes Spatiales (CNES).
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+ #
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+ # This file is part of CARS
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+ # (see https://github.com/CNES/cars).
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+ #
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+ # Licensed under the Apache License, Version 2.0 (the "License");
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+ # you may not use this file except in compliance with the License.
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+ # You may obtain a copy of the License at
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+ #
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+ # http://www.apache.org/licenses/LICENSE-2.0
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+ #
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+ # Unless required by applicable law or agreed to in writing, software
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+ # distributed under the License is distributed on an "AS IS" BASIS,
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+ # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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+ # See the License for the specific language governing permissions and
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+ # limitations under the License.
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+ #
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+ """
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+ CARS multiprocessing cluster module init file
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+ """
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+ # flake8: noqa: F401
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+
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+
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+ from . import multiprocessing_cluster
@@ -0,0 +1,212 @@
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+ #!/usr/bin/env python
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+ # coding: utf8
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+ #
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+ # Copyright (c) 2020 Centre National d'Etudes Spatiales (CNES).
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+ #
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+ # This file is part of CARS
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+ # (see https://github.com/CNES/cars).
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+ #
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+ # Licensed under the Apache License, Version 2.0 (the "License");
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+ # you may not use this file except in compliance with the License.
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+ # You may obtain a copy of the License at
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+ #
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+ # http://www.apache.org/licenses/LICENSE-2.0
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+ #
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+ # Unless required by applicable law or agreed to in writing, software
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+ # distributed under the License is distributed on an "AS IS" BASIS,
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+ # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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+ # See the License for the specific language governing permissions and
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+ # limitations under the License.
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+ #
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+ """
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+ Contains functions needed to factorize delayed
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+ """
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+
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+ # CARS imports
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+ from cars.orchestrator.cluster.mp_cluster.mp_objects import (
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+ FactorizedObject,
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+ MpDelayedTask,
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+ )
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+
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+
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+ def factorize_delayed(task_list):
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+ """
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+ Factorize Task list
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+
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+ Only factorize tasks that depends on a single task
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+
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+ :param task_list: list of delayed
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+ :type task_list: list(MpDelayed)
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+
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+ """
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+ # Compute graph usage
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+ graph_usages = compute_graph_delayed_usages(task_list)
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+
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+ # Factorize delayed
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+ already_seen_delayed_tasks = []
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+ for delayed in task_list:
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+ factorize_delayed_rec(delayed, graph_usages, already_seen_delayed_tasks)
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+
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+
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+ def factorize_delayed_rec(delayed, graph_usages, already_seen_delayed_tasks):
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+ """
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+ Factorize Task list
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+
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+ Only factorize tasks that depends on a single task
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+
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+ :param delayed: delayed to factorize
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+ :type delayed: MpDelayed
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+ :param graph_usages: number of usages of delayed
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+ :type graph_usages: dict
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+ example: {delayed1: 3}
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+ :param already_seen_delayed_tasks: list of MpDelayedTask already seen
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+
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+ """
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+
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+ # check if current delayed can be factorized
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+ depending_delayed = delayed.get_depending_delayed()
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+
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+ number_depending_task = compute_nb_depending_task(depending_delayed)
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+ max_nb_of_usages = 0
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+ if len(depending_delayed) > 0:
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+ max_nb_of_usages = max(
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+ number_of_usage(deld, graph_usages) for deld in depending_delayed
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+ )
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+
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+ current_task = delayed.delayed_task
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+
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+ if current_task not in already_seen_delayed_tasks:
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+ if number_depending_task == 1 and max_nb_of_usages == 1:
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+ previous_task = depending_delayed[0].delayed_task
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+ factorized_object = FactorizedObject(current_task, previous_task)
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+
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+ # Create new task and assign it to current delay
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+ new_task = MpDelayedTask(factorized_fun, [factorized_object], {})
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+ new_task.associated_objects = current_task.associated_objects
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+ delayed.delayed_task = new_task
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+
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+ # Factorize again with current
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+ factorize_delayed_rec(
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+ delayed, graph_usages, already_seen_delayed_tasks
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+ )
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+
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+ else:
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+ # Only set to seen when task is completly factorized
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+ already_seen_delayed_tasks.append(current_task)
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+ # Get new dependances and factorize it
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+ depending_delayed = delayed.get_depending_delayed()
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+ for new_delayed in depending_delayed:
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+ factorize_delayed_rec(
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+ new_delayed, graph_usages, already_seen_delayed_tasks
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+ )
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+
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+
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+ def compute_graph_delayed_usages(task_list):
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+ """
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+ Compute the number of times every delayed is used in graph
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+
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+ :param task_list: list of delayed
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+ :type task_list: list(MpDelayed)
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+
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+ :return: number of usages of delayed
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+ :rtype: dict
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+ example: {delayed1: 3}
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+ """
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+
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+ graph_usages = {}
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+ already_seen_tasks = []
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+
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+ for delayed in task_list:
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+ get_delayed_usage_rec(delayed, graph_usages, already_seen_tasks)
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+
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+ return graph_usages
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+
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+
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+ def get_delayed_usage_rec(delayed, graph_usages, already_seen_tasks):
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+ """
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+ Get number of time input delayed is used
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+
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+ :param delayed: delayed to factorize
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+ :type delayed: MpDelayed
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+ :param graph_usages: number of usages of delayed
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+ :type graph_usages: dict
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+ example: {delayed1: 3}
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+ :param already_seen_tasks: list of seen delayed task
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+ :type already_seen_tasks: list[MpDelayedTask]
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+ """
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+
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+ # update graph_usages
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+ if delayed in graph_usages:
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+ graph_usages[delayed] += 1
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+ else:
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+ graph_usages[delayed] = 1
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+
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+ # get usage of task inputs, if task was not already seen
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+ delayed_task = delayed.delayed_task
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+
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+ if delayed_task not in already_seen_tasks:
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+ # add task to seen
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+ already_seen_tasks.append(delayed_task)
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+
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+ # get usage for all inputs
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+ depending_delayed = delayed.get_depending_delayed()
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+ for input_delayed in depending_delayed:
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+ get_delayed_usage_rec(
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+ input_delayed, graph_usages, already_seen_tasks
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+ )
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+
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+
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+ def number_of_usage(delayed, graph_usages):
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+ """
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+ Compute the number of times a delayed is used
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+
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+ :param delayed: delayed to factorize
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+ :type delayed: MpDelayed
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+ :param graph_usages: number of usages of delayed
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+ :type graph_usages: dict
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+ example: {delayed1: 3}
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+
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+ :return: number of usages of delayed
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+ :rtype: int
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+ """
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+
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+ nb_usage = graph_usages[delayed]
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+ return nb_usage
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+
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+
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+ def compute_nb_depending_task(depending_delayed_list):
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+ """
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+ Compute the number of different delayed task in list of delayed
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+
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+ :param depending_delayed_list: list of delayed
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+ :type depending_delayed_list: list[MpDelayed]
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+
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+ :return: number of depending task
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+ :rtype: int
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+ """
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+
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+ list_delayed_task = []
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+
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+ for delayed in depending_delayed_list:
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+ delayed_task = delayed.delayed_task
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+ if delayed_task not in list_delayed_task:
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+ list_delayed_task.append(delayed_task)
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+
195
+ return len(list_delayed_task)
196
+
197
+
198
+ # Factorized function and its generator
199
+ def factorized_fun(factorized_object):
200
+ """
201
+ This function unpack multiple functions with their arguments,
202
+ and run them sequentialy until task list is empty
203
+
204
+ :param factorized_object: Object that contains a list of tasks
205
+ :type factorized_object: mp_objects.FactorizedObject
206
+ """
207
+
208
+ res = None
209
+ while factorized_object.tasks:
210
+ # Run next task with output of previous task
211
+ res = factorized_object.pop_next_task(previous_result=res)
212
+ return res