capytaine 2.3.1__cp38-cp38-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl

capytaine/meshes/clipper.py

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+"""This module implements a tools to clip meshes against a plane.
+Based on meshmagick <https://github.com/LHEEA/meshmagick> by François Rongère.
+"""
+# Copyright (C) 2017-2019 Matthieu Ancellin, based on the work of François Rongère
+# See LICENSE file at <https://github.com/mancellin/capytaine>
+
+import logging
+
+import numpy as np
+
+from capytaine.meshes.geometry import Plane
+from capytaine.meshes.meshes import Mesh
+
+LOG = logging.getLogger(__name__)
+
+
+def clip(source_mesh: Mesh, plane: Plane, vicinity_tol=1e-12, name=None):
+    """Return a new mesh containing the source mesh clipped by the plane.
+
+    Parameters
+    ----------
+    source_mesh : Mesh
+        The mesh to be clipped.
+    plane : Plane, optional
+        The clipping plane.
+    vicinity_tol : float, optional
+        The absolute tolerance to consider en vertex is on the plane. Default is 1e-12.
+    name: string, optional
+        A name for the new clipped mesh.
+    """
+    vertices_data = _vertices_positions_wrt_plane(source_mesh, plane, vicinity_tol)
+
+    nb_vertices_strictly_above_plane = np.count_nonzero(
+        vertices_data['vertices_above_mask']
+    )
+    nb_vertices_below_or_on_plane = np.count_nonzero(
+        vertices_data['vertices_below_mask'] | vertices_data['vertices_on_mask']
+    )
+
+    if nb_vertices_strictly_above_plane == source_mesh.nb_vertices:
+        LOG.warning(f"Clipping {source_mesh.name} by {plane}: all vertices are removed.")
+        clipped_mesh = Mesh(None, None)
+        clipped_mesh._clipping_data = dict(faces_ids=[])
+
+    elif nb_vertices_below_or_on_plane == source_mesh.nb_vertices:
+        LOG.info(f"Clipping {source_mesh.name} by {plane}: no action.")
+        clipped_mesh = source_mesh.copy()
+        clipped_mesh._clipping_data = dict(faces_ids=list(range(source_mesh.nb_faces)))
+
+    else:
+        upper_mesh, crown_mesh, lower_mesh = _partition_mesh(vertices_data, source_mesh)
+
+        if crown_mesh.nb_faces > 0:
+            clipped_crown_mesh = _clip_crown(crown_mesh, plane)
+            clipped_mesh = lower_mesh + clipped_crown_mesh
+            clipped_mesh._clipping_data = {
+                'faces_ids': np.concatenate((lower_mesh._clipping_data['faces_ids'],
+                                             clipped_crown_mesh._clipping_data['faces_ids']))
+            }
+        else:
+            clipped_mesh = lower_mesh
+
+    if name is None:
+        clipped_mesh.name = f'{source_mesh.name}_clipped'
+    clipped_mesh.remove_unused_vertices()
+    clipped_mesh.remove_degenerated_faces()
+
+    return clipped_mesh
+
+
+def _vertices_positions_wrt_plane(source_mesh, plane, vicinity_tol):
+    """Classifies vertices with respect to the clipping plane."""
+    vertices_distances = plane.distance_to_point(source_mesh.vertices)
+    vertices_data = {'vertices_distances': vertices_distances,
+                     'vertices_above_mask': vertices_distances > vicinity_tol,
+                     'vertices_on_mask': np.abs(vertices_distances) < vicinity_tol,
+                     'vertices_below_mask': vertices_distances < -vicinity_tol
+                     }
+    return vertices_data
+
+
+def _partition_mesh(vertices_data, source_mesh):
+    """Partitions the mesh in 3 with respect to the plane:
+    * upper_mesh: part entirely above the clipping plane
+    * crown_mesh: part intersecting the clipping plane
+    * lower_mesh: part entirely under the clipping plane
+    """
+    nb_vertices_above_per_face = vertices_data['vertices_above_mask'][source_mesh.faces].sum(axis=1)
+    nb_vertices_below_per_face = vertices_data['vertices_below_mask'][source_mesh.faces].sum(axis=1)
+
+    # Simple criteria ensuring that _faces are totally above or below the plane (4 _vertices at the same side)
+    # Works for both triangles and quadrangles
+    above_faces_mask = nb_vertices_above_per_face == 4
+    below_faces_mask = nb_vertices_below_per_face == 4
+    crown_faces_mask = np.logical_not(np.logical_or(above_faces_mask, below_faces_mask))
+
+    faces_ids = {
+        'upper_mesh': np.where(above_faces_mask)[0],
+        'crown_mesh': np.where(crown_faces_mask)[0],
+        'lower_mesh': np.where(below_faces_mask)[0]
+    }
+
+    partition = []
+    for name in ['upper_mesh', 'crown_mesh', 'lower_mesh']:
+        new_mesh, vertices_ids = source_mesh.extract_faces(
+            id_faces_to_extract=faces_ids[name], return_index=True, name=name)
+        new_mesh._clipping_data = {
+            'faces_ids': faces_ids[name],
+            'vertices_ids': vertices_ids,
+            'vertices_distances': vertices_data['vertices_distances'][vertices_ids],
+            'above_vertices_mask': vertices_data['vertices_above_mask'][vertices_ids],
+            'on_vertices_mask': vertices_data['vertices_on_mask'][vertices_ids],
+            'below_vertices_mask': vertices_data['vertices_below_mask'][vertices_ids],
+        }
+        partition.append(new_mesh)
+
+    return partition
+
+
+def _clip_crown(crown_mesh, plane):
+    """Performs the clipping operation of the crown_mesh and determines the obtained boundaries.
+    This is the heart method of the class.
+    """
+    vertices = crown_mesh.vertices
+
+    above_vertices_mask = crown_mesh._clipping_data['above_vertices_mask']
+    below_vertices_mask = crown_mesh._clipping_data['below_vertices_mask']
+
+    on_vertices_mask = crown_mesh._clipping_data['on_vertices_mask']
+    # TODO: Vertices pre-projection to be done here
+
+    vertices_distances = crown_mesh._clipping_data['vertices_distances']
+
+    # Init
+    clipped_crown_mesh_faces = list()
+    clipped_crown_mesh_relative_faces_ids = list()
+
+    direct_boundary_edges = dict()
+    inv_boundary_edges = dict()
+    intersections_vertices = list()
+
+    index_new_vertices = crown_mesh.nb_vertices
+
+    for face_id in range(crown_mesh.nb_faces):
+
+        face = crown_mesh.get_face(face_id)
+
+        # # Determining the type of face clipping
+        v_above_face = np.where(above_vertices_mask[face])[0]
+        v_on_face = np.where(on_vertices_mask[face])[0]
+        v_below_face = np.where(below_vertices_mask[face])[0]
+
+        nb_above = len(v_above_face)
+        nb_on = len(v_on_face)
+        nb_below = len(v_below_face)
+
+        face_type = str(nb_above) + str(nb_on) + str(nb_below)
+
+        if face_type == '202':
+            #    0*-----*3
+            #     |     |
+            # ----o-----o----
+            #     |     |
+            #    1*-----*2
+            if v_above_face[1] == v_above_face[0] + 1:
+                face = np.roll(face, -v_above_face[1])
+            p0, p1, p2, p3 = vertices[face]
+            ileft = plane.get_edge_intersection(p0, p1)
+            iright = plane.get_edge_intersection(p2, p3)
+            intersections_vertices += [ileft, iright]
+            boundary_edge = [index_new_vertices, index_new_vertices + 1]
+            clipped_crown_mesh_faces.append([index_new_vertices, face[1], face[2], index_new_vertices + 1])
+            clipped_crown_mesh_relative_faces_ids.append(face_id)
+            index_new_vertices += 2
+
+        elif face_type == '301':
+            #      *2
+            #     / \
+            #    /   \
+            #   /     \
+            # 3*       *1
+            #   \     /
+            # ---o---o---
+            #     \ /
+            #      *0
+            face = np.roll(face, -v_below_face[0])
+            p0, p1, p3 = vertices[face[[0, 1, 3]]]
+            ileft = plane.get_edge_intersection(p0, p3)
+            iright = plane.get_edge_intersection(p0, p1)
+            intersections_vertices += [ileft, iright]
+            boundary_edge = [index_new_vertices, index_new_vertices + 1]
+            clipped_crown_mesh_faces.append([index_new_vertices, face[0], index_new_vertices + 1, index_new_vertices])
+            clipped_crown_mesh_relative_faces_ids.append(face_id)
+            index_new_vertices += 2
+
+        elif face_type == '103':
+            #      *0
+            #     / \
+            # ---o---o---
+            #   /     \
+            # 1* - - - *3
+            #   \     /
+            #    \   /
+            #     \ /
+            #      *2
+            face = np.roll(face, -v_above_face[0])
+            p0, p1, p3 = vertices[face[[0, 1, 3]]]
+            ileft = plane.get_edge_intersection(p0, p1)
+            iright = plane.get_edge_intersection(p0, p3)
+            intersections_vertices += [ileft, iright]
+            boundary_edge = [index_new_vertices, index_new_vertices + 1]
+            clipped_crown_mesh_faces.append([index_new_vertices, face[1], face[3], index_new_vertices + 1])
+            clipped_crown_mesh_relative_faces_ids.append(face_id)
+            clipped_crown_mesh_faces.append([face[1], face[2], face[3], face[1]])
+            clipped_crown_mesh_relative_faces_ids.append(face_id)
+            index_new_vertices += 2
+
+        elif face_type == '102':
+            #      *O
+            #     / \
+            # ---o---o---
+            #   /     \
+            # 1*-------*2
+            face = np.roll(face, -v_above_face[0])
+            p0, p1, p2 = vertices[face]
+            ileft = plane.get_edge_intersection(p0, p1)
+            iright = plane.get_edge_intersection(p0, p2)
+            intersections_vertices += [ileft, iright]
+            boundary_edge = [index_new_vertices, index_new_vertices + 1]
+            clipped_crown_mesh_faces.append([index_new_vertices, face[1], face[2], index_new_vertices + 1])
+            clipped_crown_mesh_relative_faces_ids.append(face_id)
+            index_new_vertices += 2
+
+        elif face_type == '201':  # done
+            #  2*-------*1
+            #    \     /
+            #  ---o---o---
+            #      \ /
+            #       *0
+            face = np.roll(face, -v_below_face[0])
+            p0, p1, p2 = vertices[face]
+            ileft = plane.get_edge_intersection(p0, p2)
+            iright = plane.get_edge_intersection(p0, p1)
+            intersections_vertices += [ileft, iright]
+            boundary_edge = [index_new_vertices, index_new_vertices + 1]
+            clipped_crown_mesh_faces.append([index_new_vertices, face[0], index_new_vertices + 1, index_new_vertices])
+            clipped_crown_mesh_relative_faces_ids.append(face_id)
+            index_new_vertices += 2
+
+        elif face_type == '211':
+            #        *3                   *1
+            #       / \                  / \
+            #      /   *2       or     2*   \
+            #    0/   /                  \   \0
+            # ---*---o---              ---o---*---
+            #     \ /                      \ /
+            #      *1                       *3
+            #
+
+            face = np.roll(face, -v_on_face[0])
+            if vertices_distances[face[1]] < 0.:
+                p1, p2 = vertices[face[[1, 2]]]
+                iright = plane.get_edge_intersection(p1, p2)
+                intersections_vertices.append(iright)
+                boundary_edge = [face[0], index_new_vertices]
+                clipped_crown_mesh_faces.append([face[0], face[1], index_new_vertices, face[0]])
+            else:
+                p2, p3 = vertices[face[[2, 3]]]
+                ileft = plane.get_edge_intersection(p2, p3)
+                intersections_vertices.append(ileft)
+                boundary_edge = [index_new_vertices, face[0]]
+                clipped_crown_mesh_faces.append([index_new_vertices, face[3], face[0], index_new_vertices])
+            clipped_crown_mesh_relative_faces_ids.append(face_id)
+            index_new_vertices += 1
+
+        elif face_type == '112':
+            #       *3                     *1
+            #      / \                    / \
+            #  ---*---o---      or    ---o---*---
+            #     0\   \                /   /0
+            #       \   *2            2*   /
+            #        \ /                \ /
+            #         *1                 *3
+            face = np.roll(face, -v_on_face[0])
+            if vertices_distances[face[1]] < 0.:
+                p2, p3 = vertices[face[[2, 3]]]
+                iright = plane.get_edge_intersection(p2, p3)
+                intersections_vertices.append(iright)
+                boundary_edge = [face[0], index_new_vertices]
+                clipped_crown_mesh_faces.append([face[0], face[1], face[2], index_new_vertices])
+            else:
+                p1, p2 = vertices[face[[1, 2]]]
+                ileft = plane.get_edge_intersection(p1, p2)
+                intersections_vertices.append(ileft)
+                boundary_edge = [index_new_vertices, face[0]]
+                clipped_crown_mesh_faces.append([index_new_vertices, face[2], face[3], face[0]])
+            clipped_crown_mesh_relative_faces_ids.append(face_id)
+            index_new_vertices += 1
+
+        elif face_type == '013':
+            # -----*-----
+            #     / \
+            #    /   \
+            #   *     *
+            #    \   /
+            #     \ /
+            #      *
+            boundary_edge = None
+            clipped_crown_mesh_faces.append(list(face))
+            clipped_crown_mesh_relative_faces_ids.append(face_id)
+
+        elif face_type == '210' or face_type == '310':
+            #   *-------*               *
+            #    \ 210 /               / \ 310
+            #     \   /               *   *
+            #      \ /                 \ /
+            #   ----*----           ----*----
+            boundary_edge = None
+
+        elif face_type == '111':
+            #        *2              *1
+            #       /|               |\
+            #      / |               | \
+            #  ---*--o---    or   ---o--*---
+            #     0\ |               | /0
+            #       \|               |/
+            #        *1              *2
+            face = np.roll(face, -v_on_face[0])
+            p1, p2 = vertices[face[[1, 2]]]
+            if vertices_distances[face[1]] < 0.:
+                iright = plane.get_edge_intersection(p1, p2)
+                intersections_vertices.append(iright)
+                boundary_edge = [face[0], index_new_vertices]
+                clipped_crown_mesh_faces.append([face[0], face[1], index_new_vertices, face[0]])
+            else:
+                ileft = plane.get_edge_intersection(p1, p2)
+                intersections_vertices.append(ileft)
+                boundary_edge = [index_new_vertices, face[0]]
+                clipped_crown_mesh_faces.append([index_new_vertices, face[2], face[0], index_new_vertices])
+            clipped_crown_mesh_relative_faces_ids.append(face_id)
+            index_new_vertices += 1
+
+        elif face_type == '120':
+            #         *O
+            #        / \
+            #       /   \
+            #     1/     \2
+            # ----*-------*----
+            # face = np.roll(face, -v_above_face[0])
+            # boundary_edge = [face[1], face[2]]
+            # FIXME: quick fix here : robust ?
+            boundary_edge = None
+
+        elif face_type == '021':
+            #  ----*-------*----
+            #      2\     /1
+            #        \   /
+            #         \ /
+            #          *0
+            face = np.roll(face, -v_below_face[0])
+            boundary_edge = [face[2], face[1]]
+            face = list(face)
+            face.append(face[0])
+            clipped_crown_mesh_faces.append(face)
+            clipped_crown_mesh_relative_faces_ids.append(face_id)
+
+        elif face_type == '022':
+            # ----*-----*----
+            #    0|     |3
+            #     |     |
+            #    1*-----*2
+            if v_on_face[1] == v_on_face[0] + 1:
+                face = np.roll(face, -v_on_face[1])
+            boundary_edge = [face[0], face[3]]
+            clipped_crown_mesh_faces.append(list(face))
+            clipped_crown_mesh_relative_faces_ids.append(face_id)
+
+        elif face_type == '012':
+            #   ------*------
+            #        / \
+            #       /   \
+            #      /     \
+            #     *-------*
+            boundary_edge = None
+            face = list(face)
+            face.append(face[0])
+            clipped_crown_mesh_faces.append(face)
+            clipped_crown_mesh_relative_faces_ids.append(face_id)
+
+        elif face_type == '220':
+            #    0*-----*3
+            #     |     |
+            #    1|     |2
+            # ----*-----*----
+
+            # if v_above_face[1] == v_above_face[0] + 1:
+            #     face = np.roll(face, -v_above_face[1])
+            # boundary_edge = [face[1], face[2]]
+            # FIXME: quick fix here : robust ?
+            boundary_edge = None
+
+        elif face_type == '121':
+            #       *0
+            #      / \
+            #     /   \
+            # ---*-----*---
+            #    1\   /3
+            #      \ /
+            #       *2
+            face = np.roll(face, -v_above_face[0])
+            boundary_edge = [face[1], face[3]]
+            clipped_crown_mesh_faces.append([face[1], face[2], face[3], face[1]])
+            clipped_crown_mesh_relative_faces_ids.append(face_id)
+
+        elif face_type == '300' or face_type == '400':
+            #       *               *-----*
+            #      / \              |     |
+            #     /300\      or     | 400 |
+            #    *-----*            *-----*
+            # ____________       ______________
+            boundary_edge = None
+
+        elif face_type == '003':
+            #  -----------
+            #       *
+            #      / \
+            #     /   \
+            #    *-----*
+            boundary_edge = None
+            face = list(face)
+            face.append(face[0])
+            clipped_crown_mesh_faces.append(face)
+            clipped_crown_mesh_relative_faces_ids.append(face_id)
+
+        elif face_type == '004':
+            #  ---------------
+            #      *-----*
+            #      |     |
+            #      |     |
+            #      *-----*
+            boundary_edge = None
+            clipped_crown_mesh_faces.append(list(face))
+            clipped_crown_mesh_relative_faces_ids.append(face_id)
+
+        elif face_type == '030' or face_type == '040':
+            # Face is totally on the plane --> rare case...
+            boundary_edge = None
+
+        else:
+            raise Exception("Face %u clipping case %s not known." % (face_id, face_type))
+
+        # Building boundary connectivity
+        if boundary_edge is not None:
+            direct_boundary_edges[boundary_edge[0]] = boundary_edge[1]
+            inv_boundary_edges[boundary_edge[1]] = boundary_edge[0]
+
+    if len(intersections_vertices) > 0:
+        vertices = np.concatenate((vertices, intersections_vertices))
+
+    clipped_crown_mesh = Mesh(vertices, clipped_crown_mesh_faces)
+    clipped_crown_mesh._clipping_data = {
+        'faces_ids': crown_mesh._clipping_data['faces_ids'][clipped_crown_mesh_relative_faces_ids]
+    }
+
+    return clipped_crown_mesh