bsplot 0.0.2__py3-none-any.whl

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Files changed (89) hide show
  1. bsplot/__init__.py +23 -0
  2. bsplot/anat.py +55 -0
  3. bsplot/animate.py +194 -0
  4. bsplot/bioicons.py +777 -0
  5. bsplot/brain.py +188 -0
  6. bsplot/colors.py +1935 -0
  7. bsplot/data/HCP_avg-SC.txt +379 -0
  8. bsplot/data/MNI152.rh.pial +0 -0
  9. bsplot/data/STN_lh.nii.gz +0 -0
  10. bsplot/data/STN_rh.nii.gz +0 -0
  11. bsplot/data/__init__.py +22 -0
  12. bsplot/data/left_electrode.ply +257270 -0
  13. bsplot/data/parcellations/HCP-MMP1.L.label.gii +442 -0
  14. bsplot/data/parcellations/HCP-MMP1.R.label.gii +442 -0
  15. bsplot/data/parcellations/code/split_hcpmmp1.sh +4 -0
  16. bsplot/data/right_electrode.ply +257270 -0
  17. bsplot/data/surface.py +112 -0
  18. bsplot/data/tpl-MNI152NLin2009b_atlas-hcpmmp1_desc-ordered_dseg.nii.gz +0 -0
  19. bsplot/figure.py +177 -0
  20. bsplot/graph/__init__.py +31 -0
  21. bsplot/graph/edges.py +312 -0
  22. bsplot/graph/flowchart.py +762 -0
  23. bsplot/graph/layout.py +201 -0
  24. bsplot/graph/network.py +974 -0
  25. bsplot/graph/nodes.py +452 -0
  26. bsplot/panels.py +110 -0
  27. bsplot/scientific_color_maps/__init__.py +0 -0
  28. bsplot/scientific_color_maps/_sync_from_zenodo_download.sh +1 -0
  29. bsplot/scientific_color_maps/batlowK.txt +256 -0
  30. bsplot/scientific_color_maps/batlowW.txt +256 -0
  31. bsplot/scientific_color_maps/cyclic/bamO.txt +256 -0
  32. bsplot/scientific_color_maps/cyclic/brocO.txt +256 -0
  33. bsplot/scientific_color_maps/cyclic/corkO.txt +256 -0
  34. bsplot/scientific_color_maps/cyclic/romaO.txt +256 -0
  35. bsplot/scientific_color_maps/cyclic/vikO.txt +256 -0
  36. bsplot/scientific_color_maps/diverging/bam.txt +256 -0
  37. bsplot/scientific_color_maps/diverging/berlin.txt +256 -0
  38. bsplot/scientific_color_maps/diverging/broc.txt +256 -0
  39. bsplot/scientific_color_maps/diverging/cork.txt +256 -0
  40. bsplot/scientific_color_maps/diverging/lisbon.txt +256 -0
  41. bsplot/scientific_color_maps/diverging/managua.txt +256 -0
  42. bsplot/scientific_color_maps/diverging/roma.txt +256 -0
  43. bsplot/scientific_color_maps/diverging/tofino.txt +256 -0
  44. bsplot/scientific_color_maps/diverging/vanimo.txt +256 -0
  45. bsplot/scientific_color_maps/diverging/vik.txt +256 -0
  46. bsplot/scientific_color_maps/multisequential/bukavu.txt +256 -0
  47. bsplot/scientific_color_maps/multisequential/fes.txt +256 -0
  48. bsplot/scientific_color_maps/multisequential/oleron.txt +256 -0
  49. bsplot/scientific_color_maps/naviaW.txt +256 -0
  50. bsplot/scientific_color_maps/sequential/acton.txt +256 -0
  51. bsplot/scientific_color_maps/sequential/bamako.txt +256 -0
  52. bsplot/scientific_color_maps/sequential/batlow.txt +256 -0
  53. bsplot/scientific_color_maps/sequential/bilbao.txt +256 -0
  54. bsplot/scientific_color_maps/sequential/buda.txt +256 -0
  55. bsplot/scientific_color_maps/sequential/davos.txt +256 -0
  56. bsplot/scientific_color_maps/sequential/devon.txt +256 -0
  57. bsplot/scientific_color_maps/sequential/glasgow.txt +256 -0
  58. bsplot/scientific_color_maps/sequential/grayC.txt +256 -0
  59. bsplot/scientific_color_maps/sequential/hawaii.txt +256 -0
  60. bsplot/scientific_color_maps/sequential/imola.txt +256 -0
  61. bsplot/scientific_color_maps/sequential/lajolla.txt +256 -0
  62. bsplot/scientific_color_maps/sequential/lapaz.txt +256 -0
  63. bsplot/scientific_color_maps/sequential/lipari.txt +256 -0
  64. bsplot/scientific_color_maps/sequential/navia.txt +256 -0
  65. bsplot/scientific_color_maps/sequential/nuuk.txt +256 -0
  66. bsplot/scientific_color_maps/sequential/oslo.txt +256 -0
  67. bsplot/scientific_color_maps/sequential/tokyo.txt +256 -0
  68. bsplot/scientific_color_maps/sequential/turku.txt +256 -0
  69. bsplot/streamlines.py +314 -0
  70. bsplot/style.py +791 -0
  71. bsplot/styles/black.mplstyle +78 -0
  72. bsplot/styles/bss.mplstyle +50 -0
  73. bsplot/styles/bwcomp.mplstyle +30 -0
  74. bsplot/styles/nature.mplstyle +57 -0
  75. bsplot/styles/transparent.mplstyle +16 -0
  76. bsplot/styles/tvbo.mplstyle +57 -0
  77. bsplot/surface.py +2370 -0
  78. bsplot/templates.py +270 -0
  79. bsplot/text.py +199 -0
  80. bsplot/text2obj.py +59 -0
  81. bsplot/timeseries.py +10 -0
  82. bsplot/utils.py +13 -0
  83. bsplot/volume.py +958 -0
  84. bsplot-0.0.2.dist-info/METADATA +60 -0
  85. bsplot-0.0.2.dist-info/RECORD +89 -0
  86. bsplot-0.0.2.dist-info/WHEEL +5 -0
  87. bsplot-0.0.2.dist-info/entry_points.txt +2 -0
  88. bsplot-0.0.2.dist-info/licenses/LICENSE +193 -0
  89. bsplot-0.0.2.dist-info/top_level.txt +1 -0
bsplot/data/MNI152.rh.pial ADDED
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bsplot/data/STN_lh.nii.gz ADDED
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bsplot/data/STN_rh.nii.gz ADDED
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bsplot/data/__init__.py ADDED
@@ -0,0 +1,22 @@
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+ from os.path import abspath, dirname, join
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+ import numpy as np
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+ import nibabel as nib
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+
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+ ROOT = dirname(abspath(__file__))
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+
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+ hcp_sc = np.loadtxt(join(ROOT, "HCP_avg-SC.txt"))
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+
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+
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+ hcp_mmp1_fslr_rh = (
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+ nib.load(join(ROOT, "parcellations/HCP-MMP1.R.label.gii"))
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+ .darrays[0]
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+ .data.astype(int)
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+ ) # 1-180 | 0 unknown
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+
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+ hcp_mmp1_fslr_lh = (
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+ nib.load(join(ROOT, "parcellations/HCP-MMP1.L.label.gii"))
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+ .darrays[0]
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+ .data.astype(int)
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+ ) # 181-360 | 0 unknown
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+
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+ from . import surface