wuepgg3-track 2.1.5 → 3.0.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/{SharedSystems-DtNL-LrX.mjs → SharedSystems-lo30UJjL.mjs} +3 -3
- package/dist/{WebGLRenderer-DlWk4aSQ.mjs → WebGLRenderer-Dg7VLLw-.mjs} +18 -16
- package/dist/{WebGPURenderer-DlIhGb58.mjs → WebGPURenderer-FuA3tJ-C.mjs} +33 -30
- package/dist/{browserAll-Ch9OEf2Q.mjs → browserAll-DHo9VyBB.mjs} +10 -9
- package/dist/{colorToUniform-DLzITdSX.mjs → colorToUniform-BgG3nLnP.mjs} +26 -26
- package/dist/components/GenomeView/TrackComponents/DynseqComponents/DynseqTrackComponents.d.ts +0 -8
- package/dist/components/GenomeView/TrackComponents/GroupedTrackManager.d.ts +0 -3
- package/dist/components/GenomeView/TrackComponents/InteractionComponents/ArcDisplay.d.ts +1 -0
- package/dist/components/GenomeView/TrackComponents/InteractionComponents/CubicCurveDisplay.d.ts +1 -0
- package/dist/components/GenomeView/TrackComponents/InteractionComponents/SquareDisplay.d.ts +1 -0
- package/dist/components/GenomeView/TrackComponents/MethylcComponents/MethylCTrackComputation.d.ts +1 -7
- package/dist/components/GenomeView/TrackComponents/QBedComponents/QBedTrackComponents.d.ts +1 -1
- package/dist/components/GenomeView/TrackComponents/bedComponents/FiberTrackComponent.d.ts +5 -2
- package/dist/components/GenomeView/TrackComponents/commonComponents/numerical/MatplotTrackComponent.d.ts +2 -1
- package/dist/components/GenomeView/TrackComponents/commonComponents/numerical/NumericalAggregator.d.ts +1 -2
- package/dist/components/GenomeView/TrackComponents/commonComponents/numerical/NumericalTrack.d.ts +1 -1
- package/dist/components/GenomeView/TrackComponents/commonComponents/stats/BoxplotTrackComponents.d.ts +0 -12
- package/dist/components/GenomeView/TrackComponents/displayModeComponentMap.d.ts +1 -0
- package/dist/getRemoteData/BigSourceWorkerGmod.d.ts +5 -3
- package/dist/{index-DY2k589f.mjs → index-3ZU44zAW.mjs} +46243 -48121
- package/dist/index.es.js +44 -43
- package/dist/index.umd.js +252 -257
- package/dist/{init-CW9ApwVm.mjs → init-DTztoKjk.mjs} +4 -2
- package/dist/models/FeatureAggregator.d.ts +16 -1
- package/dist/models/FeatureArranger.d.ts +8 -18
- package/dist/models/Rmskv2Feature.d.ts +32 -0
- package/dist/models/getXSpan/FeaturePlacer.d.ts +48 -8
- package/dist/style.css +1 -1
- package/dist/track-container/index.d.ts +1 -1
- package/dist/trackConfigs/config-menu-models.tsx/Rmskv2TrackConfig.d.ts +4 -0
- package/dist/trackConfigs/config-menu-models.tsx/getTrackConfig.d.ts +2 -0
- package/dist/types/track-container.d.ts +3 -0
- package/dist/webworkerAll-BIMQLOM-.mjs +2 -0
- package/package.json +1 -1
- package/dist/assets/fetchDataWorker-B2Xfx9L6.js +0 -59
- package/dist/assets/fetchGenomeAlignWorker-CsrbJZgd.js +0 -72
- package/dist/getRemoteData/BigSourceWorker.d.ts +0 -47
- package/dist/getRemoteData/RepeatSource.d.ts +0 -8
- package/dist/getRemoteData/vendor/bbi-js/main/bigwig.d.ts +0 -1
- package/dist/getRemoteData/vendor/bbi-js/utils/bin.d.ts +0 -12
- package/dist/getRemoteData/vendor/bbi-js/utils/das.d.ts +0 -6
- package/dist/getRemoteData/vendor/bbi-js/utils/jszlib.d.ts +0 -1
- package/dist/getRemoteData/vendor/bbi-js/utils/sha1.d.ts +0 -1
- package/dist/getRemoteData/vendor/bbi-js/utils/spans.d.ts +0 -13
- package/dist/webworkerAll-CItaxILk.mjs +0 -2
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const t = new
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const t = new A({
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function Ee(a, e, t, r, s) {
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function
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function Ae(a, e, t, r) {
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class $ {
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s.setPipeline(i);
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}
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getPipeline(e, t, r, s) {
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e._layoutKey || (
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e._layoutKey || (Se(e, t.attributeData), this._generateBufferKey(e)), s || (s = e.topology);
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const i = Ee(
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t._layoutKey,
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}), this._bufferLayoutsCache[r] = s, s;
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const e = Ae(
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this._stencilMode,
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this._colorMask,
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type: [p.WebGPUSystem],
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name: "pipeline"
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};
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class
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+
class Le {
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constructor() {
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this.contexts = [], this.msaaTextures = [], this.msaaSamples = 1;
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}
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@@ -890,7 +893,7 @@ class ke {
|
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}
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initGpuRenderTarget(e) {
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e.isRoot = !0;
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-
const t = new
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|
+
const t = new Le();
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|
return e.colorTextures.forEach((r, s) => {
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if (r instanceof ce) {
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@@ -941,7 +944,7 @@ class ke {
|
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class X extends
|
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+
class X extends Be {
|
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constructor(e) {
|
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super(e), this.adaptor = new ke(), this.adaptor.init(e, this);
|
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@@ -1162,7 +1165,7 @@ const De = {
|
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{
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offset: 0,
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rowsPerImage: a.pixelHeight,
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bytesPerRow: a.
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+
bytesPerRow: a.pixelWidth * i
|
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1169
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{
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width: a.pixelWidth,
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@@ -1211,7 +1214,7 @@ const De = {
|
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|
if (!r)
|
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|
return;
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|
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|
if (globalThis.HTMLImageElement && r instanceof HTMLImageElement) {
|
|
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|
-
const o =
|
|
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|
+
const o = S.get().createCanvas(r.width, r.height);
|
|
1215
1218
|
o.getContext("2d").drawImage(r, 0, 0, r.width, r.height), a.resource = o, v("ImageSource: Image element passed, converting to canvas and replacing resource.");
|
|
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|
}
|
|
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|
const s = Math.min(e.width, a.resourceWidth || a.pixelWidth), i = Math.min(e.height, a.resourceHeight || a.pixelHeight), n = a.alphaMode === "premultiply-alpha-on-upload";
|
|
@@ -1437,10 +1440,10 @@ class te {
|
|
|
1437
1440
|
}
|
|
1438
1441
|
_createTextureBindGroup(e) {
|
|
1439
1442
|
const t = e.source;
|
|
1440
|
-
return this._bindGroupHash[e.uid] = new
|
|
1443
|
+
return this._bindGroupHash[e.uid] = new A({
|
|
1441
1444
|
0: t,
|
|
1442
1445
|
1: t.style,
|
|
1443
|
-
2: new
|
|
1446
|
+
2: new L({
|
|
1444
1447
|
uTextureMatrix: { type: "mat3x3<f32>", value: e.textureMatrix.mapCoord }
|
|
1445
1448
|
})
|
|
1446
1449
|
}), this._bindGroupHash[e.uid];
|
|
@@ -1453,13 +1456,13 @@ class te {
|
|
|
1453
1456
|
return this._textureViewHash[e.uid] = this.getGpuSource(e).createView(), this._textureViewHash[e.uid];
|
|
1454
1457
|
}
|
|
1455
1458
|
generateCanvas(e) {
|
|
1456
|
-
const t = this._renderer, r = t.gpu.device.createCommandEncoder(), s =
|
|
1459
|
+
const t = this._renderer, r = t.gpu.device.createCommandEncoder(), s = S.get().createCanvas();
|
|
1457
1460
|
s.width = e.source.pixelWidth, s.height = e.source.pixelHeight;
|
|
1458
1461
|
const i = s.getContext("webgpu");
|
|
1459
1462
|
return i.configure({
|
|
1460
1463
|
device: t.gpu.device,
|
|
1461
1464
|
usage: GPUTextureUsage.COPY_DST | GPUTextureUsage.COPY_SRC,
|
|
1462
|
-
format:
|
|
1465
|
+
format: S.get().getNavigator().gpu.getPreferredCanvasFormat(),
|
|
1463
1466
|
alphaMode: "premultiplied"
|
|
1464
1467
|
}), r.copyTextureToTexture({
|
|
1465
1468
|
texture: t.texture.getGpuSource(e.source),
|
|
@@ -1486,7 +1489,7 @@ class te {
|
|
|
1486
1489
|
const t = Number(e), r = this._bindGroupHash[t];
|
|
1487
1490
|
r == null || r.destroy(), this._bindGroupHash[t] = null;
|
|
1488
1491
|
}
|
|
1489
|
-
this._gpu = null, this._mipmapGenerator = null, this._gpuSources = null, this._bindGroupHash = null, this._textureViewHash = null, this._gpuSamplers = null;
|
|
1492
|
+
this._renderer = null, this._gpu = null, this._mipmapGenerator = null, this._gpuSources = null, this._bindGroupHash = null, this._textureViewHash = null, this._gpuSamplers = null;
|
|
1490
1493
|
}
|
|
1491
1494
|
}
|
|
1492
1495
|
te.extension = {
|
|
@@ -1500,7 +1503,7 @@ class re {
|
|
|
1500
1503
|
this._maxTextures = 0;
|
|
1501
1504
|
}
|
|
1502
1505
|
contextChange(e) {
|
|
1503
|
-
const t = new
|
|
1506
|
+
const t = new L({
|
|
1504
1507
|
uTransformMatrix: { value: new k(), type: "mat3x3<f32>" },
|
|
1505
1508
|
uColor: { value: new Float32Array([1, 1, 1, 1]), type: "vec4<f32>" },
|
|
1506
1509
|
uRound: { value: 0, type: "f32" }
|
|
@@ -1634,10 +1637,10 @@ const Ie = [
|
|
|
1634
1637
|
K,
|
|
1635
1638
|
I
|
|
1636
1639
|
], We = [...Ce, Y], Ve = [O, se, re], ie = [], ne = [], oe = [];
|
|
1637
|
-
|
|
1638
|
-
|
|
1639
|
-
|
|
1640
|
-
|
|
1640
|
+
B.handleByNamedList(p.WebGPUSystem, ie);
|
|
1641
|
+
B.handleByNamedList(p.WebGPUPipes, ne);
|
|
1642
|
+
B.handleByNamedList(p.WebGPUPipesAdaptor, oe);
|
|
1643
|
+
B.add(...Ie, ...We, ...Ve);
|
|
1641
1644
|
class qe extends le {
|
|
1642
1645
|
constructor() {
|
|
1643
1646
|
const e = {
|
|
@@ -1,5 +1,5 @@
|
|
|
1
|
-
import { T as A, U as Z, P as g, r as te, E as b, b as ie, w as y, e as w, C as V } from "./index-
|
|
2
|
-
import "./init-
|
|
1
|
+
import { T as A, U as Z, P as g, r as te, E as b, b as ie, w as y, e as w, C as V } from "./index-3ZU44zAW.mjs";
|
|
2
|
+
import "./init-DTztoKjk.mjs";
|
|
3
3
|
class q {
|
|
4
4
|
constructor(e) {
|
|
5
5
|
this._lastTransform = "", this._observer = null, this._tickerAttached = !1, this.updateTranslation = () => {
|
|
@@ -312,15 +312,16 @@ const se = G.default ?? G, oe = se(globalThis.navigator), re = 9, W = 100, ae =
|
|
|
312
312
|
* @private
|
|
313
313
|
*/
|
|
314
314
|
_deactivate() {
|
|
315
|
+
var e, t;
|
|
315
316
|
if (!(!this._isActive || this._isMobileAccessibility)) {
|
|
316
317
|
this._isActive = !1, globalThis.document.removeEventListener("mousemove", this._boundOnMouseMove, !0), this._activateOnTab && globalThis.addEventListener("keydown", this._boundOnKeyDown, !1), this._renderer.runners.postrender.remove(this);
|
|
317
|
-
for (const
|
|
318
|
-
e._accessibleDiv && e.
|
|
319
|
-
for (const
|
|
320
|
-
this._pools[
|
|
321
|
-
|
|
322
|
-
}), delete this._pools[
|
|
323
|
-
this._div &&
|
|
318
|
+
for (const i of this._children)
|
|
319
|
+
(e = i._accessibleDiv) != null && e.parentNode && (i._accessibleDiv.parentNode.removeChild(i._accessibleDiv), i._accessibleDiv = null), i._accessibleActive = !1;
|
|
320
|
+
for (const i in this._pools)
|
|
321
|
+
this._pools[i].forEach((s) => {
|
|
322
|
+
s.parentNode && s.parentNode.removeChild(s);
|
|
323
|
+
}), delete this._pools[i];
|
|
324
|
+
(t = this._div) != null && t.parentNode && this._div.parentNode.removeChild(this._div), this._pools = {}, this._children = [];
|
|
324
325
|
}
|
|
325
326
|
}
|
|
326
327
|
/**
|
|
@@ -1,5 +1,5 @@
|
|
|
1
|
-
import { S as M, G as x, a as F } from "./index-
|
|
2
|
-
const
|
|
1
|
+
import { S as M, G as x, a as F } from "./index-3ZU44zAW.mjs";
|
|
2
|
+
const T = {
|
|
3
3
|
normal: 0,
|
|
4
4
|
add: 1,
|
|
5
5
|
multiply: 2,
|
|
@@ -11,7 +11,7 @@ const _ = {
|
|
|
11
11
|
"screen-npm": 8,
|
|
12
12
|
min: 9,
|
|
13
13
|
max: 10
|
|
14
|
-
},
|
|
14
|
+
}, o = 0, a = 1, n = 2, l = 3, d = 4, u = 5, c = class b {
|
|
15
15
|
constructor() {
|
|
16
16
|
this.data = 0, this.blendMode = "normal", this.polygonOffset = 0, this.blend = !0, this.depthMask = !0;
|
|
17
17
|
}
|
|
@@ -20,10 +20,10 @@ const _ = {
|
|
|
20
20
|
* @default true
|
|
21
21
|
*/
|
|
22
22
|
get blend() {
|
|
23
|
-
return !!(this.data & 1 <<
|
|
23
|
+
return !!(this.data & 1 << o);
|
|
24
24
|
}
|
|
25
25
|
set blend(t) {
|
|
26
|
-
!!(this.data & 1 <<
|
|
26
|
+
!!(this.data & 1 << o) !== t && (this.data ^= 1 << o);
|
|
27
27
|
}
|
|
28
28
|
/**
|
|
29
29
|
* Activates adding an offset to depth values of polygon's fragments
|
|
@@ -95,7 +95,7 @@ const _ = {
|
|
|
95
95
|
return this._blendMode;
|
|
96
96
|
}
|
|
97
97
|
set blendMode(t) {
|
|
98
|
-
this.blend = t !== "none", this._blendMode = t, this._blendModeId =
|
|
98
|
+
this.blend = t !== "none", this._blendMode = t, this._blendModeId = T[t] || 0;
|
|
99
99
|
}
|
|
100
100
|
/**
|
|
101
101
|
* The polygon offset. Setting this property to anything other than 0 will automatically enable polygon offset fill.
|
|
@@ -115,18 +115,18 @@ const _ = {
|
|
|
115
115
|
* @returns a new State with values set for 2d rendering
|
|
116
116
|
*/
|
|
117
117
|
static for2d() {
|
|
118
|
-
const t = new
|
|
118
|
+
const t = new b();
|
|
119
119
|
return t.depthTest = !1, t.blend = !0, t;
|
|
120
120
|
}
|
|
121
121
|
};
|
|
122
122
|
c.default2d = c.for2d();
|
|
123
|
-
let
|
|
124
|
-
const
|
|
123
|
+
let _ = c;
|
|
124
|
+
const p = class f extends M {
|
|
125
125
|
/**
|
|
126
126
|
* @param options - The optional parameters of this filter.
|
|
127
127
|
*/
|
|
128
128
|
constructor(t) {
|
|
129
|
-
t = { ...f.defaultOptions, ...t }, super(t), this.enabled = !0, this._state =
|
|
129
|
+
t = { ...f.defaultOptions, ...t }, super(t), this.enabled = !0, this._state = _.for2d(), this.blendMode = t.blendMode, this.padding = t.padding, typeof t.antialias == "boolean" ? this.antialias = t.antialias ? "on" : "off" : this.antialias = t.antialias, this.resolution = t.resolution, this.blendRequired = t.blendRequired, this.clipToViewport = t.clipToViewport, this.addResource("uTexture", 0, 1), t.blendRequired && this.addResource("uBackTexture", 0, 3);
|
|
130
130
|
}
|
|
131
131
|
/**
|
|
132
132
|
* Applies the filter
|
|
@@ -135,8 +135,8 @@ const b = class f extends M {
|
|
|
135
135
|
* @param output - The target to output to.
|
|
136
136
|
* @param clearMode - Should the output be cleared before rendering to it
|
|
137
137
|
*/
|
|
138
|
-
apply(t, e,
|
|
139
|
-
t.applyFilter(this, e,
|
|
138
|
+
apply(t, e, i, r) {
|
|
139
|
+
t.applyFilter(this, e, i, r);
|
|
140
140
|
}
|
|
141
141
|
/**
|
|
142
142
|
* Get the blend mode of the filter.
|
|
@@ -155,16 +155,16 @@ const b = class f extends M {
|
|
|
155
155
|
* @returns A shiny new PixiJS filter!
|
|
156
156
|
*/
|
|
157
157
|
static from(t) {
|
|
158
|
-
const { gpu: e, gl:
|
|
158
|
+
const { gpu: e, gl: i, ...r } = t;
|
|
159
159
|
let m, g;
|
|
160
|
-
return e && (m = x.from(e)),
|
|
160
|
+
return e && (m = x.from(e)), i && (g = F.from(i)), new f({
|
|
161
161
|
gpuProgram: m,
|
|
162
162
|
glProgram: g,
|
|
163
|
-
...
|
|
163
|
+
...r
|
|
164
164
|
});
|
|
165
165
|
}
|
|
166
166
|
};
|
|
167
|
-
|
|
167
|
+
p.defaultOptions = {
|
|
168
168
|
blendMode: "normal",
|
|
169
169
|
resolution: 1,
|
|
170
170
|
padding: 0,
|
|
@@ -172,7 +172,7 @@ b.defaultOptions = {
|
|
|
172
172
|
blendRequired: !1,
|
|
173
173
|
clipToViewport: !0
|
|
174
174
|
};
|
|
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|
-
let S =
|
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175
|
+
let S = p;
|
|
176
176
|
const h = {
|
|
177
177
|
name: "local-uniform-bit",
|
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178
178
|
vertex: {
|
|
@@ -206,14 +206,14 @@ const h = {
|
|
|
206
206
|
`
|
|
207
207
|
)
|
|
208
208
|
}
|
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209
|
-
},
|
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209
|
+
}, k = {
|
|
210
210
|
...h,
|
|
211
211
|
vertex: {
|
|
212
212
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...h.vertex,
|
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213
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// replace the group!
|
|
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214
|
header: h.vertex.header.replace("group(1)", "group(2)")
|
|
215
215
|
}
|
|
216
|
-
},
|
|
216
|
+
}, P = {
|
|
217
217
|
name: "local-uniform-bit",
|
|
218
218
|
vertex: {
|
|
219
219
|
header: (
|
|
@@ -259,16 +259,16 @@ class w {
|
|
|
259
259
|
destroy() {
|
|
260
260
|
}
|
|
261
261
|
}
|
|
262
|
-
function
|
|
263
|
-
const
|
|
264
|
-
t[e++] = (
|
|
262
|
+
function R(s, t, e) {
|
|
263
|
+
const i = (s >> 24 & 255) / 255;
|
|
264
|
+
t[e++] = (s & 255) / 255 * i, t[e++] = (s >> 8 & 255) / 255 * i, t[e++] = (s >> 16 & 255) / 255 * i, t[e++] = i;
|
|
265
265
|
}
|
|
266
266
|
export {
|
|
267
267
|
w as B,
|
|
268
268
|
S as F,
|
|
269
|
-
|
|
269
|
+
_ as S,
|
|
270
270
|
h as a,
|
|
271
|
-
|
|
272
|
-
|
|
273
|
-
|
|
271
|
+
P as b,
|
|
272
|
+
R as c,
|
|
273
|
+
k as l
|
|
274
274
|
};
|
package/dist/components/GenomeView/TrackComponents/DynseqComponents/DynseqTrackComponents.d.ts
CHANGED
|
@@ -39,13 +39,6 @@ interface DynseqTrackProps {
|
|
|
39
39
|
xvaluesData: any;
|
|
40
40
|
}
|
|
41
41
|
declare class DynseqTrackComponents extends PureComponent<DynseqTrackProps> {
|
|
42
|
-
static propTypes: {
|
|
43
|
-
data: any;
|
|
44
|
-
unit: any;
|
|
45
|
-
options: any;
|
|
46
|
-
isLoading: any;
|
|
47
|
-
error: any;
|
|
48
|
-
};
|
|
49
42
|
xToValue: Array<any> | null;
|
|
50
43
|
xToValue2: Array<any> | null;
|
|
51
44
|
allValues: Array<any>;
|
|
@@ -53,7 +46,6 @@ declare class DynseqTrackComponents extends PureComponent<DynseqTrackProps> {
|
|
|
53
46
|
scales: any;
|
|
54
47
|
hasReverse: boolean;
|
|
55
48
|
constructor(props: DynseqTrackProps);
|
|
56
|
-
aggregateFeatures: (data: any[], viewRegion: any, width: number, aggregatorId: string) => any;
|
|
57
49
|
computeScales: (xToValue: number[], xToValue2: number[], height: number) => {
|
|
58
50
|
valueToHeight: import("d3-scale").ScaleLinear<number, number, never>;
|
|
59
51
|
valueToY: import("d3-scale").ScaleLinear<number, number, never>;
|
|
@@ -33,9 +33,6 @@ export declare class GroupedTrackManager {
|
|
|
33
33
|
* @returns list of groups found in the track list, their data, and their original indicies
|
|
34
34
|
*/
|
|
35
35
|
aggregator: NumericalAggregator;
|
|
36
|
-
dynseqAggregator: (data: any[], viewRegion: any, width: number, aggregatorId: string) => any;
|
|
37
|
-
aggregateRecords: (data: any[], viewRegion: any, width: number) => any;
|
|
38
|
-
aggregateFeaturesMatplot: (data: any, viewRegion: any, width: any, aggregatorId: any) => any;
|
|
39
36
|
constructor();
|
|
40
37
|
getGroupScale(tracks: TrackModel[], trackData: any, width: number, viewWindow: OpenInterval, dataIdx: number, trackFetchedDataCache: any): {
|
|
41
38
|
[groupId: number]: {
|
package/dist/components/GenomeView/TrackComponents/InteractionComponents/CubicCurveDisplay.d.ts
CHANGED
|
@@ -14,6 +14,7 @@ interface CubicCurveDisplayProps {
|
|
|
14
14
|
forceSvg?: boolean;
|
|
15
15
|
bothAnchorsInView?: boolean;
|
|
16
16
|
options?: any;
|
|
17
|
+
legend?: any;
|
|
17
18
|
}
|
|
18
19
|
export declare class CubicCurveDisplay extends React.PureComponent<CubicCurveDisplayProps, {}> {
|
|
19
20
|
renderCurve: (placedInteraction: PlacedInteraction, index: number) => any;
|
package/dist/components/GenomeView/TrackComponents/MethylcComponents/MethylCTrackComputation.d.ts
CHANGED
|
@@ -50,16 +50,10 @@ interface MethylCTrackProps {
|
|
|
50
50
|
xvaluesData?: any;
|
|
51
51
|
}
|
|
52
52
|
declare class MethylCTrack extends PureComponent<MethylCTrackProps> {
|
|
53
|
-
static propTypes: {
|
|
54
|
-
data: any;
|
|
55
|
-
options: any;
|
|
56
|
-
isLoading: any;
|
|
57
|
-
error: any;
|
|
58
|
-
};
|
|
59
53
|
aggregatedRecords: any[];
|
|
60
54
|
scales: any;
|
|
61
55
|
constructor(props: MethylCTrackProps);
|
|
62
|
-
aggregateRecords: (data: any[], viewRegion: any, width: number) => any;
|
|
56
|
+
aggregateRecords: (data: any[], viewRegion: any, width: number) => any[];
|
|
63
57
|
computeScales: (xMap: any[], height: number, maxMethyl: number) => {
|
|
64
58
|
methylToY: import("d3-scale").ScaleLinear<number, number, never>;
|
|
65
59
|
depthToY: import("d3-scale").ScaleLinear<number, number, never>;
|
|
@@ -57,7 +57,7 @@ declare class QBedTrackComponents extends React.PureComponent<QBedTrackProps> {
|
|
|
57
57
|
private xToValue;
|
|
58
58
|
private scales;
|
|
59
59
|
constructor(props: QBedTrackProps);
|
|
60
|
-
aggregateFeatures(data: Array<any>, viewRegion: any, width: number): any;
|
|
60
|
+
aggregateFeatures(data: Array<any>, viewRegion: any, width: number): [any[], any[]];
|
|
61
61
|
computeScales(xToValue: any, height: number): {
|
|
62
62
|
valueToY: import("d3-scale").ScaleLinear<number, number, never>;
|
|
63
63
|
min: number;
|
|
@@ -1,11 +1,10 @@
|
|
|
1
1
|
import React from "react";
|
|
2
|
-
import { PropsFromTrackContainer } from "../commonComponents/Track";
|
|
3
2
|
import { Fiber } from "../../../../models/Feature";
|
|
4
3
|
import OpenInterval from "../../../../models/OpenInterval";
|
|
5
4
|
import DisplayedRegionModel from "../../../../models/DisplayedRegionModel";
|
|
6
5
|
import { FiberDisplayModes } from "../../../../trackConfigs/config-menu-models.tsx/DisplayModes";
|
|
7
6
|
export declare const FIBER_DENSITY_CUTOFF_LENGTH = 300000;
|
|
8
|
-
interface FiberTrackProps
|
|
7
|
+
interface FiberTrackProps {
|
|
9
8
|
data: Fiber[];
|
|
10
9
|
options: {
|
|
11
10
|
color?: string;
|
|
@@ -24,7 +23,11 @@ interface FiberTrackProps extends PropsFromTrackContainer {
|
|
|
24
23
|
getAnnotationTrack: any;
|
|
25
24
|
trackState: any;
|
|
26
25
|
renderTooltip: any;
|
|
26
|
+
width: number;
|
|
27
|
+
trackModel: any;
|
|
28
|
+
viewWindow: OpenInterval;
|
|
27
29
|
svgHeight: any;
|
|
30
|
+
isLoading: boolean;
|
|
28
31
|
updatedLegend: any;
|
|
29
32
|
getGenePadding: any;
|
|
30
33
|
getHeight: any;
|
|
@@ -1,6 +1,7 @@
|
|
|
1
1
|
import React from "react";
|
|
2
2
|
import { ScaleChoices } from "../../../../../models/ScaleChoices";
|
|
3
3
|
import Feature from "../../../../../models/Feature";
|
|
4
|
+
import { NumericalAggregator } from "./NumericalAggregator";
|
|
4
5
|
export declare const DEFAULT_OPTIONS: {
|
|
5
6
|
aggregateMethod: string;
|
|
6
7
|
height: number;
|
|
@@ -46,8 +47,8 @@ declare class MatplotTrackComponent extends React.PureComponent<MatplotTrackProp
|
|
|
46
47
|
};
|
|
47
48
|
xToValue: any;
|
|
48
49
|
scales: any;
|
|
50
|
+
aggregator: NumericalAggregator;
|
|
49
51
|
constructor(props: any);
|
|
50
|
-
aggregateFeatures(data: any, viewRegion: any, width: any, aggregatorId: any): any;
|
|
51
52
|
computeScales(xToValue: any, height: any): {
|
|
52
53
|
valueToY: import("d3-scale").ScaleLinear<number, number, never>;
|
|
53
54
|
min: any;
|