wuepgg3-track 1.0.2

package/dist/models/genomes/pfal3d7/pfal3d7.d.ts

@@ -0,0 +1,39 @@
+export default Pfal3D7;
+declare namespace Pfal3D7 {
+    export { genome };
+    export { navContext };
+    export { cytobands };
+    export { defaultRegion };
+    export { defaultTracks };
+    export { publicHubList };
+    export { publicHubData };
+    export const twoBitURL: string;
+    export { annotationTracks };
+}
+declare const genome: Genome;
+declare const navContext: import("../../NavigationContext").default;
+import cytobands from "./cytoBandIdeo.json";
+declare const defaultRegion: import("../..").OpenInterval;
+declare const defaultTracks: TrackModel[];
+declare const publicHubList: ({
+    collection: string;
+    name: string;
+    numTracks: number;
+    oldHubFormat: boolean;
+    url: string;
+    description: string;
+} | {
+    collection: string;
+    name: string;
+    numTracks: number;
+    oldHubFormat: boolean;
+    url: string;
+    description?: undefined;
+})[];
+declare const publicHubData: {
+    "Noble lab": string;
+    "3D structures": string;
+};
+import annotationTracks from "./annotationTracks.json";
+import Genome from "../../Genome";
+import TrackModel from "../../TrackModel";

package/dist/models/genomes/phaw5/phaw5.d.ts

@@ -0,0 +1,17 @@
+export default phaw5;
+declare namespace phaw5 {
+    export { genome };
+    export { navContext };
+    export const cytobands: {};
+    export { defaultRegion };
+    export { defaultTracks };
+    export const twoBitURL: string;
+    export { annotationTracks };
+}
+declare const genome: Genome;
+declare const navContext: import("../../NavigationContext").default;
+declare const defaultRegion: import("../..").OpenInterval;
+declare const defaultTracks: TrackModel[];
+import annotationTracks from "./annotationTracks.json";
+import Genome from "../../Genome";
+import TrackModel from "../../TrackModel";

package/dist/models/genomes/rheMac10/rheMac10.d.ts

@@ -0,0 +1,18 @@
+export default rheMac10;
+declare namespace rheMac10 {
+    export { genome };
+    export { navContext };
+    export { cytobands };
+    export { defaultRegion };
+    export { defaultTracks };
+    export const twoBitURL: string;
+    export { annotationTracks };
+}
+declare const genome: Genome;
+declare const navContext: import("../../NavigationContext").default;
+import cytobands from "./cytoBandIdeo.json";
+declare const defaultRegion: import("../..").OpenInterval;
+declare const defaultTracks: TrackModel[];
+import annotationTracks from "./annotationTracks.json";
+import Genome from "../../Genome";
+import TrackModel from "../../TrackModel";

package/dist/models/genomes/rheMac2/rheMac2.d.ts

@@ -0,0 +1,17 @@
+export default rheMac2;
+declare namespace rheMac2 {
+    export { genome };
+    export { navContext };
+    export const cytobands: {};
+    export { defaultRegion };
+    export { defaultTracks };
+    export const twoBitURL: string;
+    export { annotationTracks };
+}
+declare const genome: Genome;
+declare const navContext: import("../../NavigationContext").default;
+declare const defaultRegion: import("../..").OpenInterval;
+declare const defaultTracks: TrackModel[];
+import annotationTracks from "./annotationTracks.json";
+import Genome from "../../Genome";
+import TrackModel from "../../TrackModel";

package/dist/models/genomes/rheMac3/rheMac3.d.ts

@@ -0,0 +1,17 @@
+export default RHEMAC3;
+declare namespace RHEMAC3 {
+    export { genome };
+    export { navContext };
+    export const cytobands: {};
+    export { defaultRegion };
+    export { defaultTracks };
+    export const twoBitURL: string;
+    export { annotationTracks };
+}
+declare const genome: Genome;
+declare const navContext: import("../../NavigationContext").default;
+declare const defaultRegion: import("../..").OpenInterval;
+declare const defaultTracks: TrackModel[];
+import annotationTracks from "./annotationTracks.json";
+import Genome from '../../Genome';
+import TrackModel from '../../TrackModel';

package/dist/models/genomes/rheMac8/rheMac8.d.ts

@@ -0,0 +1,18 @@
+export default rheMac8;
+declare namespace rheMac8 {
+    export { genome };
+    export { navContext };
+    export { cytobands };
+    export { defaultRegion };
+    export { defaultTracks };
+    export const twoBitURL: string;
+    export { annotationTracks };
+}
+declare const genome: Genome;
+declare const navContext: import("../../NavigationContext").default;
+import cytobands from './cytoBandIdeo.json';
+declare const defaultRegion: import("../..").OpenInterval;
+declare const defaultTracks: TrackModel[];
+import annotationTracks from "./annotationTracks.json";
+import Genome from '../../Genome';
+import TrackModel from '../../TrackModel';

package/dist/models/genomes/rn4/rn4.d.ts

@@ -0,0 +1,18 @@
+export default rn4;
+declare namespace rn4 {
+    export { genome };
+    export { navContext };
+    export { cytobands };
+    export { defaultRegion };
+    export { defaultTracks };
+    export const twoBitURL: string;
+    export { annotationTracks };
+}
+declare const genome: Genome;
+declare const navContext: import("../../NavigationContext").default;
+import cytobands from "./cytoBandIdeo.json";
+declare const defaultRegion: import("../..").OpenInterval;
+declare const defaultTracks: TrackModel[];
+import annotationTracks from "./annotationTracks.json";
+import Genome from "../../Genome";
+import TrackModel from "../../TrackModel";

package/dist/models/genomes/rn6/rn6.d.ts

@@ -0,0 +1,18 @@
+export default rn6;
+declare namespace rn6 {
+    export { genome };
+    export { navContext };
+    export { cytobands };
+    export { defaultRegion };
+    export { defaultTracks };
+    export const twoBitURL: string;
+    export { annotationTracks };
+}
+declare const genome: Genome;
+declare const navContext: import("../../NavigationContext").default;
+import cytobands from './cytoBand.json';
+declare const defaultRegion: import("../..").OpenInterval;
+declare const defaultTracks: TrackModel[];
+import annotationTracks from './annotationTracks.json';
+import Genome from '../../Genome';
+import TrackModel from '../../TrackModel';

package/dist/models/genomes/rn7/rn7.d.ts

@@ -0,0 +1,18 @@
+export default rn7;
+declare namespace rn7 {
+    export { genome };
+    export { navContext };
+    export { cytobands };
+    export { defaultRegion };
+    export { defaultTracks };
+    export const twoBitURL: string;
+    export { annotationTracks };
+}
+declare const genome: Genome;
+declare const navContext: import("../../NavigationContext").default;
+import cytobands from "./cytoBandIdeo.json";
+declare const defaultRegion: import("../..").OpenInterval;
+declare const defaultTracks: TrackModel[];
+import annotationTracks from "./annotationTracks.json";
+import Genome from "../../Genome";
+import TrackModel from "../../TrackModel";

package/dist/models/genomes/sacCer3/sacCer3.d.ts

@@ -0,0 +1,30 @@
+export default sacCer3;
+declare namespace sacCer3 {
+    export { genome };
+    export { navContext };
+    export { cytobands };
+    export { defaultRegion };
+    export { defaultTracks };
+    export const twoBitURL: string;
+    export { publicHubData };
+    export { publicHubList };
+    export { annotationTracks };
+}
+declare const genome: Genome;
+declare const navContext: import("../../NavigationContext").default;
+import cytobands from "./cytoBandIdeo.json";
+declare const defaultRegion: import("../..").OpenInterval;
+declare const defaultTracks: TrackModel[];
+declare const publicHubData: {
+    "3D structures": string;
+};
+declare const publicHubList: {
+    collection: string;
+    name: string;
+    numTracks: number;
+    oldHubFormat: boolean;
+    url: string;
+}[];
+import annotationTracks from "./annotationTracks.json";
+import Genome from "../../Genome";
+import TrackModel from "../../TrackModel";

package/dist/models/genomes/susScr11/susScr11.d.ts

@@ -0,0 +1,18 @@
+export default susScr11;
+declare namespace susScr11 {
+    export { genome };
+    export { navContext };
+    export { cytobands };
+    export { defaultRegion };
+    export { defaultTracks };
+    export const twoBitURL: string;
+    export { annotationTracks };
+}
+declare const genome: Genome;
+declare const navContext: import("../../NavigationContext").default;
+import cytobands from "./cytoBandIdeo.json";
+declare const defaultRegion: import("../..").OpenInterval;
+declare const defaultTracks: TrackModel[];
+import annotationTracks from "./annotationTracks.json";
+import Genome from "../../Genome";
+import TrackModel from "../../TrackModel";

package/dist/models/genomes/susScr3/susScr3.d.ts

@@ -0,0 +1,18 @@
+export default susScr3;
+declare namespace susScr3 {
+    export { genome };
+    export { navContext };
+    export { cytobands };
+    export { defaultRegion };
+    export { defaultTracks };
+    export const twoBitURL: string;
+    export { annotationTracks };
+}
+declare const genome: Genome;
+declare const navContext: import("../../NavigationContext").default;
+import cytobands from "./cytoBandIdeo.json";
+declare const defaultRegion: import("../..").OpenInterval;
+declare const defaultTracks: TrackModel[];
+import annotationTracks from "./annotationTracks.json";
+import Genome from "../../Genome";
+import TrackModel from "../../TrackModel";

package/dist/models/genomes/t2t-chm13-v1.1/chm13.d.ts

@@ -0,0 +1,17 @@
+export default CHM13v1_1;
+declare namespace CHM13v1_1 {
+    export { genome };
+    export { navContext };
+    export const cytobands: {};
+    export { defaultRegion };
+    export { defaultTracks };
+    export const twoBitURL: string;
+    export { annotationTracks };
+}
+declare const genome: Genome;
+declare const navContext: import("../../NavigationContext").default;
+declare const defaultRegion: import("../..").OpenInterval;
+declare const defaultTracks: TrackModel[];
+import annotationTracks from "./annotationTracks.json";
+import Genome from "../../Genome";
+import TrackModel from "../../TrackModel";

package/dist/models/genomes/t2t-chm13-v2.0/chm13v2.d.ts

@@ -0,0 +1,18 @@
+export default CHM13v2;
+declare namespace CHM13v2 {
+    export { genome };
+    export { navContext };
+    export { cytobands };
+    export { defaultRegion };
+    export { defaultTracks };
+    export const twoBitURL: string;
+    export { annotationTracks };
+}
+declare const genome: Genome;
+declare const navContext: import("../../NavigationContext").default;
+import cytobands from "./chm13v2.0_cytobands_allchrs.bed.json";
+declare const defaultRegion: import("../..").OpenInterval;
+declare const defaultTracks: TrackModel[];
+import annotationTracks from "./annotationTracks.json";
+import Genome from "../../Genome";
+import TrackModel from "../../TrackModel";

package/dist/models/genomes/trypanosome/TbruceiLister427.d.ts

@@ -0,0 +1,32 @@
+export default TbruceiLister427;
+declare namespace TbruceiLister427 {
+    export { genome };
+    export { navContext };
+    export const cytobands: {};
+    export { defaultRegion };
+    export { defaultTracks };
+    export const twoBitURL: string;
+    export { annotationTracks };
+}
+declare const genome: Genome;
+declare const navContext: import("../../NavigationContext").default;
+declare const defaultRegion: import("../..").OpenInterval;
+declare const defaultTracks: TrackModel[];
+declare namespace annotationTracks {
+    const Ruler: {
+        type: string;
+        label: string;
+        name: string;
+    }[];
+    const Genes: {
+        name: string;
+        label: string;
+        filetype: string;
+        queryEndpoint: {
+            name: string;
+            endpoint: string;
+        };
+    }[];
+}
+import Genome from "../../Genome";
+import TrackModel from "../../TrackModel";

package/dist/models/genomes/trypanosome/TbruceiTREU927.d.ts

@@ -0,0 +1,32 @@
+export default TbruceiTREU927;
+declare namespace TbruceiTREU927 {
+    export { genome };
+    export { navContext };
+    export const cytobands: {};
+    export { defaultRegion };
+    export { defaultTracks };
+    export const twoBitURL: string;
+    export { annotationTracks };
+}
+declare const genome: Genome;
+declare const navContext: import("../../NavigationContext").default;
+declare const defaultRegion: import("../..").OpenInterval;
+declare const defaultTracks: TrackModel[];
+declare namespace annotationTracks {
+    const Ruler: {
+        type: string;
+        label: string;
+        name: string;
+    }[];
+    const Genes: {
+        name: string;
+        label: string;
+        filetype: string;
+        queryEndpoint: {
+            name: string;
+            endpoint: string;
+        };
+    }[];
+}
+import Genome from "../../Genome";
+import TrackModel from "../../TrackModel";

package/dist/models/genomes/virus/ebola.d.ts

@@ -0,0 +1,47 @@
+export default Ebola;
+declare namespace Ebola {
+    export { genome };
+    export { navContext };
+    export const cytobands: {};
+    export { defaultRegion };
+    export { defaultTracks };
+    export const twoBitURL: string;
+    export { annotationTracks };
+}
+declare const genome: Genome;
+declare const navContext: import("../../NavigationContext").default;
+declare const defaultRegion: import("../..").OpenInterval;
+declare const defaultTracks: TrackModel[];
+declare namespace annotationTracks {
+    const Ruler: {
+        type: string;
+        label: string;
+        name: string;
+    }[];
+    const Genes: {
+        name: string;
+        label: string;
+        filetype: string;
+    }[];
+    const Assembly: {
+        type: string;
+        name: string;
+        url: string;
+    }[];
+    const Diversity: ({
+        type: string;
+        name: string;
+        url: string;
+        options: {
+            aggregateMethod: string;
+            height: number;
+        };
+    } | {
+        type: string;
+        name: string;
+        url: string;
+        options?: undefined;
+    })[];
+}
+import Genome from "../../Genome";
+import TrackModel from "../../TrackModel";

package/dist/models/genomes/virus/hpv16.d.ts

@@ -0,0 +1,28 @@
+export default hpv16;
+declare namespace hpv16 {
+    export { genome };
+    export { navContext };
+    export const cytobands: {};
+    export { defaultRegion };
+    export { defaultTracks };
+    export const twoBitURL: string;
+    export { annotationTracks };
+}
+declare const genome: Genome;
+declare const navContext: import("../../NavigationContext").default;
+declare const defaultRegion: import("../..").OpenInterval;
+declare const defaultTracks: TrackModel[];
+declare namespace annotationTracks {
+    const Ruler: {
+        type: string;
+        label: string;
+        name: string;
+    }[];
+    const Genes: {
+        name: string;
+        label: string;
+        filetype: string;
+    }[];
+}
+import Genome from "../../Genome";
+import TrackModel from "../../TrackModel";

package/dist/models/genomes/virus/mers.d.ts

@@ -0,0 +1,54 @@
+export default MERS;
+declare namespace MERS {
+    export { genome };
+    export { navContext };
+    export const cytobands: {};
+    export { defaultRegion };
+    export { defaultTracks };
+    export const twoBitURL: string;
+    export { annotationTracks };
+}
+declare const genome: Genome;
+declare const navContext: import("../../NavigationContext").default;
+declare const defaultRegion: import("../..").OpenInterval;
+declare const defaultTracks: TrackModel[];
+declare const annotationTracks: {
+    Ruler: {
+        type: string;
+        label: string;
+        name: string;
+    }[];
+    Genes: {
+        name: string;
+        label: string;
+        filetype: string;
+    }[];
+    Assembly: {
+        type: string;
+        name: string;
+        url: string;
+    }[];
+    Diversity: ({
+        type: string;
+        name: string;
+        url: string;
+        options: {
+            aggregateMethod: string;
+            height: number;
+        };
+    } | {
+        type: string;
+        name: string;
+        url: string;
+        options?: undefined;
+    })[];
+    "Genome Comparison": {
+        name: string;
+        label: string;
+        querygenome: string;
+        filetype: string;
+        url: string;
+    }[];
+};
+import Genome from "../../Genome";
+import TrackModel from "../../TrackModel";