synapse-react-client 2.1.21 → 3.0.0

package/dist/utils/SynapseClient.js

@@ -1,8 +1,9 @@
 "use strict";
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.getWikiAttachmentsFromEvaluation = exports.getWikiAttachmentsFromEntity = exports.getWikiPageKeyForAccessRequirement = exports.getWikiPageKeyForEntity = exports.getTeamList = exports.getUserTeamList = exports.getUserChallenges = exports.removeUserFavorite = exports.getUserFavorites = exports.getEntityWiki = exports.getEntityBundleV2 = exports.deleteEntity = exports.updateEntity = exports.getEntityHeader = exports.getEntityHeaders = exports.getEntityHeadersByIds = exports.getEntity = exports.getBulkFiles = exports.getFiles = exports.lookupChildEntity = exports.getEntityChildren = exports.getUserProfiles = exports.getGroupHeadersBatch = exports.getUserGroupHeaders = exports.getUserBundle = exports.getUserProfileById = exports.getUserProfile = exports.createProject = exports.createEntity = exports.oAuthSessionRequest = exports.oAuthUrlRequest = exports.login = exports.getFullQueryTableResults = exports.getQueryTableResults = exports.getAsyncResultFromJobId = exports.getFileHandleByIdURL = exports.getActualFileHandleByIdURL = exports.getFileHandleById = exports.getDownloadFromTableRequest = exports.addFilesToDownloadList = exports.getVersion = exports.doPut = exports.doDelete = exports.doGet = exports.doPost = exports.delay = exports.getRootURL = exports.SYNAPSE_STORAGE_LOCATION_ID = exports.ACCESS_TOKEN_COOKIE_KEY = exports.IS_OUTSIDE_SYNAPSE_ORG = void 0;
-exports.getAccessRequirement = exports.getRestrictionInformation = exports.getProjectStatistics = exports.rejectFormData = exports.acceptFormData = exports.listFormDataAsFormAdmin = exports.listFormData = exports.submitFormData = exports.deleteFormData = exports.updateFormData = exports.createFormData = exports.updateFormACL = exports.getFormACL = exports.createFormGroup = exports.consentToOAuth2Request = exports.getAuthenticatedOn = exports.getOAuth2Client = exports.hasUserAuthorizedOAuthClient = exports.getOAuth2RequestDescription = exports.getEvaluationSubmissions = exports.deleteEvaluationRound = exports.updateEvaluationRound = exports.createEvaluationRound = exports.getEvaluationRoundsList = exports.getEvaluationRound = exports.deleteEvaluation = exports.createEvaluation = exports.updateEvaluation = exports.getEvaluation = exports.getEvaluationPermissions = exports.submitToEvaluation = exports.createACL = exports.addFilesToDownloadListV2 = exports.createManifestFromDownloadListV2 = exports.createPackageFromDownloadListV2 = exports.addFileToDownloadListV2 = exports.getFileResult = exports.getFileHandleContent = exports.getFileHandleContentFromID = exports.startMultipartUpload = exports.checkUploadComplete = exports.uploadFile = exports.signOut = exports.detectSSOCode = exports.getPrincipalAliasRequest = exports.getUseUtcTimeFromCookie = exports.getAccessTokenFromCookie = exports.setAccessTokenCookie = exports.isInSynapseExperimentalMode = exports.getPresignedUrlForWikiAttachment = void 0;
-exports.signSynapseTermsOfUse = exports.bindOAuthProviderToAccount = exports.oAuthRegisterAccountStep2 = exports.registerAccountStep2 = exports.registerAccountStep1 = exports.isAliasAvailable = exports.getNotificationEmail = exports.updateEntityJson = exports.getEntityJson = exports.hasAccessToEntity = exports.getValidationSchema = exports.getSchema = exports.getSchemaValidationResults = exports.getSchemaBinding = exports.cancelDataAccessRequest = exports.submitDataAccessRequest = exports.updateDataAccessRequest = exports.getDataAccessRequestForUpdate = exports.getResearchProject = exports.updateResearchProject = exports.removeItemFromDownloadListV2 = exports.getDownloadListActionsRequired = exports.getDownloadListStatistics = exports.getAvailableFilesToDownload = exports.clearDownloadListV2 = exports.searchEntities = exports.getEntityVersions = exports.getEntityPath = exports.getUserProjects = exports.getMyProjects = exports.deletePersonalAccessToken = exports.getPersonalAccessTokenRecords = exports.createPersonalAccessToken = exports.getTransformSqlWithFacetsRequest = exports.updateTable = exports.deleteDownloadList = exports.deleteDownloadListFiles = exports.getAllOfPaginatedService = exports.getDownloadOrder = exports.getDownloadList = exports.postAccessApproval = exports.getAccessApproval = exports.getAllAccessRequirements = exports.getAccessRequirementStatus = exports.getAccessRequirementById = void 0;
+exports.getTeamList = exports.getUserTeamList = exports.getUserChallenges = exports.removeUserFavorite = exports.getUserFavorites = exports.getEntityWiki = exports.getEntityBundleV2 = exports.deleteEntity = exports.updateEntity = exports.getEntityHeader = exports.getEntityHeaders = exports.getEntityHeadersByIds = exports.getEntity = exports.getBulkFiles = exports.getFiles = exports.lookupChildEntity = exports.getEntityChildren = exports.getUserProfiles = exports.getGroupHeadersBatch = exports.getUserGroupHeaders = exports.updateMyUserProfile = exports.getMyUserBundle = exports.getUserBundle = exports.getUserProfileById = exports.getUserProfile = exports.createProject = exports.createEntity = exports.oAuthSessionRequest = exports.oAuthUrlRequest = exports.login = exports.getFullQueryTableResults = exports.getQueryTableResults = exports.getQueryTableAsyncJobResults = exports.getAsyncResultBodyFromJobId = exports.getAsyncResultFromJobId = exports.getFileHandleByIdURL = exports.getActualFileHandleByIdURL = exports.getFileHandleById = exports.getDownloadFromTableRequest = exports.getVersion = exports.doPut = exports.doDelete = exports.doGet = exports.doPost = exports.SynapseClientError = exports.delay = exports.getRootURL = exports.SYNAPSE_STORAGE_LOCATION_ID = exports.ACCESS_TOKEN_COOKIE_KEY = exports.IS_OUTSIDE_SYNAPSE_ORG = void 0;
+exports.acceptFormData = exports.listFormDataAsFormAdmin = exports.listFormData = exports.submitFormData = exports.deleteFormData = exports.updateFormData = exports.createFormData = exports.updateFormACL = exports.getFormACL = exports.createFormGroup = exports.consentToOAuth2Request = exports.getAuthenticatedOn = exports.getOAuth2Client = exports.hasUserAuthorizedOAuthClient = exports.getOAuth2RequestDescription = exports.getEvaluationSubmissions = exports.deleteEvaluationRound = exports.updateEvaluationRound = exports.createEvaluationRound = exports.getEvaluationRoundsList = exports.getEvaluationRound = exports.deleteEvaluation = exports.createEvaluation = exports.updateEvaluation = exports.getEvaluation = exports.getEvaluationPermissions = exports.submitToEvaluation = exports.createACL = exports.addFilesToDownloadListV2 = exports.createManifestFromDownloadListV2 = exports.createPackageFromDownloadListV2 = exports.addFileToDownloadListV2 = exports.getFileResult = exports.getFileHandleContent = exports.getFileHandleContentFromID = exports.startMultipartUpload = exports.checkUploadComplete = exports.uploadFile = exports.signOut = exports.detectSSOCode = exports.getPrincipalAliasRequest = exports.getUseUtcTimeFromCookie = exports.getAccessTokenFromCookie = exports.setAccessTokenCookie = exports.isInSynapseExperimentalMode = exports.getPresignedUrlForWikiAttachment = exports.getWikiAttachmentsFromEvaluation = exports.getWikiAttachmentsFromEntity = exports.getWikiPageKeyForAccessRequirement = exports.getWikiPageKeyForEntity = void 0;
+exports.createProfileVerificationSubmission = exports.signSynapseTermsOfUse = exports.bindOAuthProviderToAccount = exports.oAuthRegisterAccountStep2 = exports.registerAccountStep2 = exports.registerAccountStep1 = exports.isAliasAvailable = exports.getNotificationEmail = exports.updateEntityJson = exports.getEntityJson = exports.hasAccessToEntity = exports.getValidationSchema = exports.getSchema = exports.getSchemaValidationResults = exports.getSchemaBinding = exports.cancelDataAccessRequest = exports.submitDataAccessRequest = exports.updateDataAccessRequest = exports.getDataAccessRequestForUpdate = exports.getResearchProject = exports.updateResearchProject = exports.removeItemFromDownloadListV2 = exports.getDownloadListActionsRequired = exports.getDownloadListStatistics = exports.getAvailableFilesToDownload = exports.clearDownloadListV2 = exports.searchEntities = exports.getEntityVersions = exports.getEntityPath = exports.getUserProjects = exports.getMyProjects = exports.deletePersonalAccessToken = exports.getPersonalAccessTokenRecords = exports.createPersonalAccessToken = exports.getTransformSqlWithFacetsRequest = exports.updateTable = exports.deleteDownloadList = exports.deleteDownloadListFiles = exports.getAllOfPaginatedService = exports.getDownloadOrder = exports.getDownloadList = exports.postAccessApproval = exports.getAccessApproval = exports.getAllAccessRequirements = exports.getAccessRequirementStatus = exports.getAccessRequirementById = exports.getAccessRequirement = exports.getRestrictionInformation = exports.getProjectStatistics = exports.rejectFormData = void 0;
+exports.changePasswordWithCurrentPassword = void 0;
 var tslib_1 = require("tslib");
 var spark_md5_1 = (0, tslib_1.__importDefault)(require("spark-md5"));
 var universal_cookie_1 = (0, tslib_1.__importDefault)(require("universal-cookie"));
@@ -44,6 +45,21 @@ function delay(t) {
     });
 }
 exports.delay = delay;
+/**
+ * Error message returned by the Synapse backend joined with the
+ * HTTP status code.
+ */
+var SynapseClientError = /** @class */ (function (_super) {
+    (0, tslib_1.__extends)(SynapseClientError, _super);
+    function SynapseClientError(status, reason) {
+        var _this = _super.call(this, reason) || this;
+        _this.status = status;
+        _this.reason = reason;
+        return _this;
+    }
+    return SynapseClientError;
+}(Error));
+exports.SynapseClientError = SynapseClientError;
 /*
   0 - no internet connection
   429 - Too Many Requests
@@ -52,54 +68,60 @@ exports.delay = delay;
   504 - Gateway Timeout
 */
 var RETRY_STATUS_CODES = [0, 429, 502, 503, 504];
+/**
+ * Fetches data, retrying if the HTTP status code indicates that it could be retried. Contains custom logic for
+ * handling errors returned by the Synapse backend.
+ * @throws SynapseClientError
+ */
 var fetchWithExponentialTimeout = function (url, options, delayMs) {
     if (delayMs === void 0) { delayMs = 1000; }
-    return fetch(url, options)
-        .then(function (resp) {
-        return resp
-            .text()
-            .then(function (text) {
-            // try to parse it as json
-            try {
-                var json = JSON.parse(text);
-                return resp.ok ? Promise.resolve(json) : Promise.reject(json);
-            }
-            catch (error) {
-                // failed to parse json, return text
-                return resp.ok ? Promise.resolve(text) : Promise.reject(text);
-            }
-        })
-            .catch(function (error) {
-            if (resp.ok) {
-                // possible empty response
-                return Promise.resolve({
-                    reason: error,
-                    status: resp.status,
-                });
-            }
-            if (error.reason && resp.status) {
-                // successful return from server but invalid call
-                return Promise.reject((0, tslib_1.__assign)((0, tslib_1.__assign)({}, error), { status: resp.status }));
+    return (0, tslib_1.__awaiter)(void 0, void 0, void 0, function () {
+        var response, responseBody, responseObject;
+        return (0, tslib_1.__generator)(this, function (_a) {
+            switch (_a.label) {
+                case 0: return [4 /*yield*/, fetch(url, options)];
+                case 1:
+                    response = _a.sent();
+                    _a.label = 2;
+                case 2:
+                    if (!(response.status && RETRY_STATUS_CODES.includes(response.status))) return [3 /*break*/, 5];
+                    return [4 /*yield*/, delay(delayMs)
+                        // Exponential backoff if we re-fetch
+                    ];
+                case 3:
+                    _a.sent();
+                    // Exponential backoff if we re-fetch
+                    delayMs = delayMs * 2;
+                    return [4 /*yield*/, fetch(url, options)];
+                case 4:
+                    response = _a.sent();
+                    return [3 /*break*/, 2];
+                case 5: return [4 /*yield*/, response.text()];
+                case 6:
+                    responseBody = _a.sent();
+                    responseObject = responseBody;
+                    try {
+                        // try to parse it as json
+                        responseObject = JSON.parse(responseBody);
+                    }
+                    catch (error) {
+                        console.warn('Failed to parse response as JSON', responseBody);
+                    }
+                    if (response.ok) {
+                        return [2 /*return*/, responseObject];
+                    }
+                    else if (typeof responseObject === 'object' && 'reason' in responseObject) {
+                        throw new SynapseClientError(response.status, responseObject.reason);
+                    }
+                    else {
+                        throw new SynapseClientError(response.status, JSON.stringify(responseObject));
+                    }
+                    return [2 /*return*/];
             }
-            // This occurs if the response is not ok and does not have json or is empty
-            return Promise.reject({
-                reason: error,
-                status: resp.status,
-            });
         });
-    })
-        .catch(function (error) {
-        if (error.status && RETRY_STATUS_CODES.indexOf(error.status) !== -1) {
-            return delay(delayMs).then(function () {
-                return fetchWithExponentialTimeout(url, options, delayMs * 2);
-            });
-        }
-        else {
-            return Promise.reject(error);
-        }
     });
 };
-var doPost = function (url, requestJsonObject, accessToken, initCredentials, endpoint) {
+var doPost = function (url, requestJsonObject, accessToken, initCredentials, endpoint, signal) {
     var options = {
         body: JSON.stringify(requestJsonObject),
         headers: {
@@ -110,6 +132,7 @@ var doPost = function (url, requestJsonObject, accessToken, initCredentials, end
         method: 'POST',
         mode: 'cors',
         credentials: initCredentials,
+        signal: signal,
     };
     if (accessToken) {
         // @ts-ignore
@@ -179,36 +202,21 @@ var getVersion = function () {
     return (0, exports.doGet)('/repo/v1/version', undefined, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
 };
 exports.getVersion = getVersion;
-/**
- * https://rest-docs.synapse.org/rest/POST/download/list/add/async/start.html
- */
-//Start an asynchronous job to add files to a user's download list.
-var addFilesToDownloadList = function (request, accessToken, updateParentState) {
-    return (0, exports.doPost)("/file/v1/download/list/add/async/start", request, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT)
-        .then(function (resp) {
-        var requestUrl = "/file/v1/download/list/add/async/get/" + resp.token;
-        return (0, exports.getAsyncResultFromJobId)(requestUrl, accessToken, updateParentState).then(function (data) {
-            (0, dispatchDownloadListChangeEvent_1.dispatchDownloadListChangeEvent)(data.downloadList);
-            return data;
-        });
-    })
-        .catch(function (error) {
-        throw error;
-    });
-};
-exports.addFilesToDownloadList = addFilesToDownloadList;
 /**
  * https://rest-docs.synapse.org/rest/POST/entity/id/table/download/csv/async/start.html
  */
-var getDownloadFromTableRequest = function (request, accessToken, updateParentState) {
+var getDownloadFromTableRequest = function (request, accessToken) {
     if (accessToken === void 0) { accessToken = undefined; }
-    return (0, exports.doPost)("/repo/v1/entity/" + request.entityId + "/table/download/csv/async/start", request, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT)
-        .then(function (resp) {
-        var requestUrl = "/repo/v1/entity/" + request.entityId + "/table/download/csv/async/get/" + resp.token;
-        return (0, exports.getAsyncResultFromJobId)(requestUrl, accessToken, updateParentState);
-    })
-        .catch(function (error) {
-        throw error;
+    return (0, tslib_1.__awaiter)(void 0, void 0, void 0, function () {
+        var asyncJobId;
+        return (0, tslib_1.__generator)(this, function (_a) {
+            switch (_a.label) {
+                case 0: return [4 /*yield*/, (0, exports.doPost)("/repo/v1/entity/" + request.entityId + "/table/download/csv/async/start", request, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT)];
+                case 1:
+                    asyncJobId = _a.sent();
+                    return [2 /*return*/, (0, exports.getAsyncResultBodyFromJobId)(asyncJobId.token, "/repo/v1/entity/" + request.entityId + "/table/download/csv/async/get/" + asyncJobId.token, accessToken)];
+            }
+        });
     });
 };
 exports.getDownloadFromTableRequest = getDownloadFromTableRequest;
@@ -246,45 +254,99 @@ var getFileHandleByIdURL = function (handleId, accessToken) {
     return (0, exports.doGet)("/file/v1/fileHandle/" + handleId + "/url?redirect=false", accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
 };
 exports.getFileHandleByIdURL = getFileHandleByIdURL;
-var getAsyncResultFromJobId = function (urlRequest, accessToken, updateParentState) {
-    if (accessToken === void 0) { accessToken = undefined; }
-    return (0, exports.doGet)(urlRequest, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT)
-        .then(function (resp) {
-        // is this the job status?
-        if (resp.jobState && resp.jobState !== 'FAILED') {
-            updateParentState &&
-                updateParentState({
-                    asyncJobStatus: resp,
-                });
-            // still processing, wait for a second and try again
-            return delay(500).then(function () {
-                return (0, exports.getAsyncResultFromJobId)(urlRequest, accessToken, updateParentState);
-            });
+/**
+ * Get a completed asynchronous job. Will refetch every 500ms until COMPLETE or FAILED.
+ * @param asyncJobId
+ * @param accessToken
+ * @param setCurrentAsyncResult - optional function that will receive the AsynchronousJobStatus object every time
+ *   it's fetched, including while it is in the "PROCESSING" state.
+ * @returns
+ */
+var getAsyncResultFromJobId = function (asyncJobId, responseBodyEndpoint, accessToken, setCurrentAsyncResult) { return (0, tslib_1.__awaiter)(void 0, void 0, void 0, function () {
+    var response;
+    return (0, tslib_1.__generator)(this, function (_a) {
+        switch (_a.label) {
+            case 0: return [4 /*yield*/, (0, exports.doGet)("/repo/v1/asynchronous/job/" + asyncJobId, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT)];
+            case 1:
+                response = _a.sent();
+                setCurrentAsyncResult === null || setCurrentAsyncResult === void 0 ? void 0 : setCurrentAsyncResult(response);
+                _a.label = 2;
+            case 2:
+                if (!(response.jobState && response.jobState === 'PROCESSING')) return [3 /*break*/, 5];
+                return [4 /*yield*/, delay(500)];
+            case 3:
+                _a.sent();
+                return [4 /*yield*/, (0, exports.doGet)("/repo/v1/asynchronous/job/" + asyncJobId, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT)];
+            case 4:
+                response = _a.sent();
+                setCurrentAsyncResult === null || setCurrentAsyncResult === void 0 ? void 0 : setCurrentAsyncResult(response);
+                return [3 /*break*/, 2];
+            case 5:
+                if (response.jobState === 'FAILED') {
+                    /**
+                     * While we technically already have the failure reason in the response, the HTTP response doesn't give a helpful error code (e.g. 403)
+                     * that we can use for an error banner. We can get the HTTP code if we fetch the response body directly.
+                     */
+                    (0, exports.doGet)(responseBodyEndpoint, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
+                }
+                return [2 /*return*/, response];
         }
-        // these must be the query results!
-        return resp;
-    })
-        .catch(function (error) {
-        throw error;
     });
-};
+}); };
 exports.getAsyncResultFromJobId = getAsyncResultFromJobId;
+/**
+ * Get the response body for an asynchronous job, or throw an error if the job failed.
+ * @param asyncJobId
+ * @param accessToken
+ * @returns
+ */
+var getAsyncResultBodyFromJobId = function (asyncJobId, responseBodyEndpoint, accessToken) { return (0, tslib_1.__awaiter)(void 0, void 0, void 0, function () {
+    var response;
+    return (0, tslib_1.__generator)(this, function (_a) {
+        switch (_a.label) {
+            case 0: return [4 /*yield*/, (0, exports.getAsyncResultFromJobId)(asyncJobId, responseBodyEndpoint, accessToken)];
+            case 1:
+                response = _a.sent();
+                return [2 /*return*/, response.responseBody];
+        }
+    });
+}); };
+exports.getAsyncResultBodyFromJobId = getAsyncResultBodyFromJobId;
 /**
  * https://rest-docs.synapse.org/rest/POST/entity/id/table/query/nextPage/async/start.html
  * @param {*} queryBundleRequest
  * @param {*} accessToken
  * @param {*} endpoint
  */
-var getQueryTableResults = function (queryBundleRequest, accessToken, updateParentState) {
-    if (accessToken === void 0) { accessToken = undefined; }
-    return (0, exports.doPost)("/repo/v1/entity/" + queryBundleRequest.entityId + "/table/query/async/start", queryBundleRequest, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT)
-        .then(function (resp) {
-        return (0, exports.getAsyncResultFromJobId)("/repo/v1/entity/" + queryBundleRequest.entityId + "/table/query/async/get/" + resp.token, accessToken, updateParentState);
-    })
-        .catch(function (error) {
-        throw error;
+var getQueryTableAsyncJobResults = function (queryBundleRequest, accessToken) { return (0, tslib_1.__awaiter)(void 0, void 0, void 0, function () {
+    var asyncJobId;
+    return (0, tslib_1.__generator)(this, function (_a) {
+        switch (_a.label) {
+            case 0: return [4 /*yield*/, (0, exports.doPost)("/repo/v1/entity/" + queryBundleRequest.entityId + "/table/query/async/start", queryBundleRequest, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT)];
+            case 1:
+                asyncJobId = _a.sent();
+                return [2 /*return*/, (0, exports.getAsyncResultFromJobId)(asyncJobId.token, "/repo/v1/entity/" + queryBundleRequest.entityId + "/table/query/async/get/" + asyncJobId.token, accessToken)];
+        }
     });
-};
+}); };
+exports.getQueryTableAsyncJobResults = getQueryTableAsyncJobResults;
+/**
+ * https://rest-docs.synapse.org/rest/POST/entity/id/table/query/nextPage/async/start.html
+ * @param {*} queryBundleRequest
+ * @param {*} accessToken
+ * @param {*} endpoint
+ */
+var getQueryTableResults = function (queryBundleRequest, accessToken) { return (0, tslib_1.__awaiter)(void 0, void 0, void 0, function () {
+    var asyncJobId;
+    return (0, tslib_1.__generator)(this, function (_a) {
+        switch (_a.label) {
+            case 0: return [4 /*yield*/, (0, exports.doPost)("/repo/v1/entity/" + queryBundleRequest.entityId + "/table/query/async/start", queryBundleRequest, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT)];
+            case 1:
+                asyncJobId = _a.sent();
+                return [2 /*return*/, (0, exports.getAsyncResultBodyFromJobId)(asyncJobId.token, "/repo/v1/entity/" + queryBundleRequest.entityId + "/table/query/async/get/" + asyncJobId.token, accessToken)];
+        }
+    });
+}); };
 exports.getQueryTableResults = getQueryTableResults;
 /**
  *  Run and return results from queryBundleRequest, queryBundle request must be of the
@@ -417,6 +479,26 @@ var getUserBundle = function (id, mask, accessToken) {
     return (0, exports.doGet)((0, APIConstants_1.USER_ID_BUNDLE)(id) + "?mask=" + mask, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
 };
 exports.getUserBundle = getUserBundle;
+/**
+ * Return the ucurrent user's bundle
+ * http://rest-docs.synapse.org/rest/GET/user/bundle.html
+ */
+var getMyUserBundle = function (mask, accessToken) {
+    return (0, exports.doGet)(APIConstants_1.USER_BUNDLE + "?mask=" + mask, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
+};
+exports.getMyUserBundle = getMyUserBundle;
+/**
+ * Update your own profile
+ * @param profile
+ * @param accessToken
+ * @returns
+ */
+var updateMyUserProfile = function (profile, accessToken) {
+    if (accessToken === void 0) { accessToken = undefined; }
+    var url = '/repo/v1/userProfile';
+    return (0, exports.doPut)(url, profile, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
+};
+exports.updateMyUserProfile = updateMyUserProfile;
 /**
  * Get Users and Groups that match the given prefix.
  * http://rest-docs.synapse.org/rest/GET/userGroupHeaders.html
@@ -450,9 +532,9 @@ exports.getUserProfiles = getUserProfiles;
  * Return the children (Files/Folders) of the given entity (Project or Folder).
  * https://rest-docs.synapse.org/rest/POST/entity/children.html
  */
-var getEntityChildren = function (request, accessToken) {
+var getEntityChildren = function (request, accessToken, signal) {
     if (accessToken === void 0) { accessToken = undefined; }
-    return (0, exports.doPost)('/repo/v1/entity/children', request, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
+    return (0, exports.doPost)('/repo/v1/entity/children', request, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT, signal);
 };
 exports.getEntityChildren = getEntityChildren;
 /**
@@ -479,17 +561,26 @@ exports.getFiles = getFiles;
  */
 var getBulkFiles = function (bulkFileDownloadRequest, accessToken) {
     if (accessToken === void 0) { accessToken = undefined; }
-    return (0, exports.doPost)('/file/v1/file/bulk/async/start', bulkFileDownloadRequest, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT)
-        .then(function (asyncJobId) {
-        var urlRequest = "/file/v1/file/bulk/async/get/" + asyncJobId.token;
-        return (0, exports.getAsyncResultFromJobId)(urlRequest, accessToken);
-    })
-        .catch(function (err) {
-        console.error('Error on getBulkFiles ', err);
-        throw err;
+    return (0, tslib_1.__awaiter)(void 0, void 0, void 0, function () {
+        var asyncJobId;
+        return (0, tslib_1.__generator)(this, function (_a) {
+            switch (_a.label) {
+                case 0: return [4 /*yield*/, (0, exports.doPost)('/file/v1/file/bulk/async/start', bulkFileDownloadRequest, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT)];
+                case 1:
+                    asyncJobId = _a.sent();
+                    return [2 /*return*/, (0, exports.getAsyncResultBodyFromJobId)(asyncJobId.token, "/file/v1/file/bulk/async/get/" + asyncJobId.token, accessToken)];
+            }
+        });
     });
 };
 exports.getBulkFiles = getBulkFiles;
+/**
+ * Bundled access to Entity and related data components.
+ * An EntityBundle can be used to create, fetch, or update an Entity and associated
+ * objects with a single web service request.
+ * See SynapseClient.test.js for an example partsMask.
+ * https://rest-docs.synapse.org/rest/org/sagebionetworks/repo/model/Entity.html
+ */
 var getEntity = function (accessToken, entityId, versionNumber) {
     if (accessToken === void 0) { accessToken = undefined; }
     if (entityId.indexOf('.') > -1) {
@@ -794,11 +885,13 @@ var detectSSOCode = function (registerAccountUrl, onError) {
                 }
             };
             if (state) {
-                (0, exports.oAuthRegisterAccountStep2)(state, provider, code, redirectUrl, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT).then(onSuccess)
+                (0, exports.oAuthRegisterAccountStep2)(state, provider, code, redirectUrl, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT)
+                    .then(onSuccess)
                     .catch(onFailure);
             }
             else {
-                (0, exports.oAuthSessionRequest)(provider, code, redirectUrl, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT).then(onSuccess)
+                (0, exports.oAuthSessionRequest)(provider, code, redirectUrl, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT)
+                    .then(onSuccess)
                     .catch(onFailure);
             }
         }
@@ -810,7 +903,8 @@ var detectSSOCode = function (registerAccountUrl, onError) {
                     onError(err.reason);
                 }
             };
-            (0, exports.bindOAuthProviderToAccount)(provider, code, redirectUrl, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT).then(redirectAfterSuccess_1)
+            (0, exports.bindOAuthProviderToAccount)(provider, code, redirectUrl, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT)
+                .then(redirectAfterSuccess_1)
                 .catch(onFailure);
         }
     }
@@ -978,36 +1072,22 @@ var uploadFilePart = function (presignedUrl, file, contentType) { return (0, tsl
 var startMultipartUpload = function (accessToken, fileName, file, request, fileUploadResolve, fileUploadReject) {
     var url = '/file/v1/file/multipart';
     (0, exports.doPost)(url, request, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT)
-        .then(function (status) { return (0, tslib_1.__awaiter)(void 0, void 0, void 0, function () {
-        var clientSidePartsState, i;
-        return (0, tslib_1.__generator)(this, function (_a) {
-            switch (_a.label) {
-                case 0:
-                    clientSidePartsState = status.partsState
-                        .split('')
-                        .map(function (bit) { return bit === '1'; });
-                    status.clientSidePartsState = clientSidePartsState;
-                    i = 0;
-                    _a.label = 1;
-                case 1:
-                    if (!(i < clientSidePartsState.length)) return [3 /*break*/, 4];
-                    if (!!clientSidePartsState[i]) return [3 /*break*/, 3];
-                    // upload this part.  note that partNumber is always the index+1
-                    return [4 /*yield*/, processFilePart(i + 1, status, accessToken, fileName, file, request, fileUploadResolve, fileUploadReject)];
-                case 2:
-                    // upload this part.  note that partNumber is always the index+1
-                    _a.sent();
-                    _a.label = 3;
-                case 3:
-                    i = i + 1;
-                    return [3 /*break*/, 1];
-                case 4:
-                    // in case there is no upload work to do!
-                    (0, exports.checkUploadComplete)(status, fileName, accessToken, fileUploadResolve, fileUploadReject);
-                    return [2 /*return*/];
+        .then(function (status) {
+        // started the upload
+        // keep track of the part state client-side
+        var clientSidePartsState = status.partsState
+            .split('')
+            .map(function (bit) { return bit === '1'; });
+        status.clientSidePartsState = clientSidePartsState;
+        for (var i = 0; i < clientSidePartsState.length; i = i + 1) {
+            if (!clientSidePartsState[i]) {
+                // upload this part.  note that partNumber is always the index+1
+                processFilePart(i + 1, status, accessToken, fileName, file, request, fileUploadResolve, fileUploadReject);
             }
-        });
-    }); })
+        }
+        // in case there is no upload work to do!
+        (0, exports.checkUploadComplete)(status, fileName, accessToken, fileUploadResolve, fileUploadReject);
+    })
         .catch(function (error) {
         fileUploadReject(error);
     });
@@ -1111,39 +1191,44 @@ exports.addFileToDownloadListV2 = addFileToDownloadListV2;
 /**
  * http://rest-docs.synapse.org/rest/POST/download/list/package/async/start.html
  */
-var createPackageFromDownloadListV2 = function (zipFileName, accessToken, updateParentState) {
-    if (accessToken === void 0) { accessToken = undefined; }
-    var request = {
-        zipFileName: zipFileName,
-        includeManifest: true,
-        concreteType: 'org.sagebionetworks.repo.model.download.DownloadListPackageRequest',
-    };
-    return (0, exports.doPost)("/repo/v1/download/list/package/async/start", request, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT)
-        .then(function (resp) {
-        var requestUrl = "/repo/v1/download/list/package/async/get/" + resp.token;
-        return (0, exports.getAsyncResultFromJobId)(requestUrl, accessToken, updateParentState);
-    })
-        .catch(function (error) {
-        throw error;
+var createPackageFromDownloadListV2 = function (zipFileName, accessToken) { return (0, tslib_1.__awaiter)(void 0, void 0, void 0, function () {
+    var request, asyncJobId;
+    return (0, tslib_1.__generator)(this, function (_a) {
+        switch (_a.label) {
+            case 0:
+                request = {
+                    zipFileName: zipFileName,
+                    includeManifest: true,
+                    concreteType: 'org.sagebionetworks.repo.model.download.DownloadListPackageRequest',
+                };
+                return [4 /*yield*/, (0, exports.doPost)("/repo/v1/download/list/package/async/start", request, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT)];
+            case 1:
+                asyncJobId = _a.sent();
+                return [2 /*return*/, (0, exports.getAsyncResultBodyFromJobId)(asyncJobId.token, "/repo/v1/download/list/package/async/get/" + asyncJobId.token, accessToken)];
+        }
     });
-};
+}); };
 exports.createPackageFromDownloadListV2 = createPackageFromDownloadListV2;
 /**
  * http://rest-docs.synapse.org/rest/POST/download/list/package/async/start.html
  */
-var createManifestFromDownloadListV2 = function (accessToken, updateParentState) {
+var createManifestFromDownloadListV2 = function (accessToken) {
     if (accessToken === void 0) { accessToken = undefined; }
-    var request = {
-        csvTableDescriptor: {},
-        concreteType: 'org.sagebionetworks.repo.model.download.DownloadListManifestRequest',
-    };
-    return (0, exports.doPost)("/repo/v1/download/list/manifest/async/start", request, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT)
-        .then(function (resp) {
-        var requestUrl = "/repo/v1/download/list/manifest/async/get/" + resp.token;
-        return (0, exports.getAsyncResultFromJobId)(requestUrl, accessToken, updateParentState);
-    })
-        .catch(function (error) {
-        throw error;
+    return (0, tslib_1.__awaiter)(void 0, void 0, void 0, function () {
+        var request, asyncJobId;
+        return (0, tslib_1.__generator)(this, function (_a) {
+            switch (_a.label) {
+                case 0:
+                    request = {
+                        csvTableDescriptor: {},
+                        concreteType: 'org.sagebionetworks.repo.model.download.DownloadListManifestRequest',
+                    };
+                    return [4 /*yield*/, (0, exports.doPost)("/repo/v1/download/list/manifest/async/start", request, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT)];
+                case 1:
+                    asyncJobId = _a.sent();
+                    return [2 /*return*/, (0, exports.getAsyncResultBodyFromJobId)(asyncJobId.token, "/repo/v1/download/list/manifest/async/get/" + asyncJobId.token, accessToken)];
+            }
+        });
     });
 };
 exports.createManifestFromDownloadListV2 = createManifestFromDownloadListV2;
@@ -1151,17 +1236,17 @@ exports.createManifestFromDownloadListV2 = createManifestFromDownloadListV2;
  * http://rest-docs.synapse.org/rest/POST/download/list/add/async/start.html
  * Start an asynchronous job to add files to a user's download list from either a view query or a folder. Use GET /download/list/add/async/get/{asyncToken} to get both the job status and job results.
  */
-var addFilesToDownloadListV2 = function (request, accessToken, updateParentState) {
+var addFilesToDownloadListV2 = function (request, accessToken) {
     if (accessToken === void 0) { accessToken = undefined; }
     return (0, tslib_1.__awaiter)(void 0, void 0, void 0, function () {
+        var asyncJobId;
         return (0, tslib_1.__generator)(this, function (_a) {
-            return [2 /*return*/, (0, exports.doPost)('/repo/v1//download/list/add/async/start', request, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT)
-                    .then(function (resp) {
-                    return (0, exports.getAsyncResultFromJobId)("/repo/v1/download/list/add/async/get/" + resp.token, accessToken, updateParentState);
-                })
-                    .catch(function (error) {
-                    throw error;
-                })];
+            switch (_a.label) {
+                case 0: return [4 /*yield*/, (0, exports.doPost)('/repo/v1/download/list/add/async/start', request, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT)];
+                case 1:
+                    asyncJobId = _a.sent();
+                    return [2 /*return*/, (0, exports.getAsyncResultBodyFromJobId)(asyncJobId.token, "/repo/v1/download/list/add/async/get/" + asyncJobId.token, accessToken)];
+            }
         });
     });
 };
@@ -1605,14 +1690,18 @@ exports.deleteDownloadList = deleteDownloadList;
  * @param {*} endpoint
  * // technically returns a TableUpdateTransactionResponse, but I don't see any reason we need this
  */
-var updateTable = function (tableUpdateRequest, accessToken, updateParentState) {
+var updateTable = function (tableUpdateRequest, accessToken) {
     if (accessToken === void 0) { accessToken = undefined; }
-    return (0, exports.doPost)("/repo/v1/entity/" + tableUpdateRequest.entityId + "/table/transaction/async/start", tableUpdateRequest, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT)
-        .then(function (resp) {
-        return (0, exports.getAsyncResultFromJobId)("/repo/v1/entity/" + tableUpdateRequest.entityId + "/table/transaction/async/get/" + resp.token, accessToken, updateParentState);
-    })
-        .catch(function (error) {
-        throw error;
+    return (0, tslib_1.__awaiter)(void 0, void 0, void 0, function () {
+        var asyncJobId;
+        return (0, tslib_1.__generator)(this, function (_a) {
+            switch (_a.label) {
+                case 0: return [4 /*yield*/, (0, exports.doPost)("/repo/v1/entity/" + tableUpdateRequest.entityId + "/table/transaction/async/start", tableUpdateRequest, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT)];
+                case 1:
+                    asyncJobId = _a.sent();
+                    return [2 /*return*/, (0, exports.getAsyncResultBodyFromJobId)(asyncJobId.token, "/repo/v1/entity/" + tableUpdateRequest.entityId + "/table/transaction/async/get/" + asyncJobId.token, accessToken)];
+            }
+        });
     });
 };
 exports.updateTable = updateTable;
@@ -1664,23 +1753,22 @@ var searchEntities = function (query, accessToken) {
     return (0, exports.doPost)('/repo/v1/search', query, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
 };
 exports.searchEntities = searchEntities;
-var getDownloadListJobResponse = function (accessToken, queryRequestDetails) {
-    var downloadListQueryRequest = {
-        concreteType: 'org.sagebionetworks.repo.model.download.DownloadListQueryRequest',
-        requestDetails: queryRequestDetails,
-    };
-    return (0, exports.doPost)('/repo/v1/download/list/query/async/start', downloadListQueryRequest, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT)
-        .then(function (asyncJobId) {
-        var urlRequest = "/repo/v1/download/list/query/async/get/" + asyncJobId.token;
-        return (0, exports.getAsyncResultFromJobId)(urlRequest, accessToken).then(function (queryResponse) {
-            return queryResponse.responseDetails;
-        });
-    })
-        .catch(function (err) {
-        console.error('Error on getDownloadListV2 ', err);
-        throw err;
+var getDownloadListJobResponse = function (accessToken, queryRequestDetails) { return (0, tslib_1.__awaiter)(void 0, void 0, void 0, function () {
+    var downloadListQueryRequest, asyncJobId;
+    return (0, tslib_1.__generator)(this, function (_a) {
+        switch (_a.label) {
+            case 0:
+                downloadListQueryRequest = {
+                    concreteType: 'org.sagebionetworks.repo.model.download.DownloadListQueryRequest',
+                    requestDetails: queryRequestDetails,
+                };
+                return [4 /*yield*/, (0, exports.doPost)('/repo/v1/download/list/query/async/start', downloadListQueryRequest, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT)];
+            case 1:
+                asyncJobId = _a.sent();
+                return [2 /*return*/, (0, exports.getAsyncResultBodyFromJobId)(asyncJobId.token, "/repo/v1/download/list/query/async/get/" + asyncJobId.token, accessToken)];
+        }
     });
-};
+}); };
 /**
  * Clear all files from the user's Download List v2.
  * http://rest-docs.synapse.org/rest/DELETE/download/list.html
@@ -1800,18 +1888,17 @@ exports.getSchema = getSchema;
  * @returns
  */
 var getValidationSchema = function (schema$id, accessToken) { return (0, tslib_1.__awaiter)(void 0, void 0, void 0, function () {
+    var asyncJobId;
     return (0, tslib_1.__generator)(this, function (_a) {
-        return [2 /*return*/, (0, exports.doPost)(APIConstants_1.SCHEMA_VALIDATION_START, {
-                concreteType: 'org.sagebionetworks.repo.model.schema.GetValidationSchemaRequest',
-                $id: schema$id,
-            }, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT)
-                .then(function (asyncJobId) {
-                return (0, exports.getAsyncResultFromJobId)((0, APIConstants_1.SCHEMA_VALIDATION_GET)(asyncJobId.token), accessToken);
-            })
-                .catch(function (err) {
-                console.error('Error on getValidationSchema ', err);
-                throw err;
-            })];
+        switch (_a.label) {
+            case 0: return [4 /*yield*/, (0, exports.doPost)(APIConstants_1.SCHEMA_VALIDATION_START, {
+                    concreteType: 'org.sagebionetworks.repo.model.schema.GetValidationSchemaRequest',
+                    $id: schema$id,
+                }, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT)];
+            case 1:
+                asyncJobId = _a.sent();
+                return [2 /*return*/, (0, exports.getAsyncResultBodyFromJobId)(asyncJobId.token, (0, APIConstants_1.SCHEMA_VALIDATION_GET)(asyncJobId.token), accessToken)];
+        }
     });
 }); };
 exports.getValidationSchema = getValidationSchema;
@@ -1914,4 +2001,14 @@ var signSynapseTermsOfUse = function (accessToken) {
     return (0, exports.doPost)(APIConstants_1.SIGN_TERMS_OF_USE, { accessToken: accessToken }, undefined, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
 };
 exports.signSynapseTermsOfUse = signSynapseTermsOfUse;
+//https://rest-docs.synapse.org/rest/POST/verificationSubmission.html
+var createProfileVerificationSubmission = function (verificationSubmission, accessToken) {
+    return (0, exports.doPost)(APIConstants_1.VERIFICATION_SUBMISSION, verificationSubmission, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
+};
+exports.createProfileVerificationSubmission = createProfileVerificationSubmission;
+// https://rest-docs.synapse.org/rest/POST/user/changePassword.html
+var changePasswordWithCurrentPassword = function (newPassword, accessToken) {
+    return (0, exports.doPost)('/auth/v1/user/changePassword', newPassword, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
+};
+exports.changePasswordWithCurrentPassword = changePasswordWithCurrentPassword;
 //# sourceMappingURL=SynapseClient.js.map