swarm-engine 1.3.0 → 1.38.0

package/README.md

@@ -3,13 +3,13 @@
 [![npm](https://img.shields.io/npm/v/swarm-engine)](https://www.npmjs.com/package/swarm-engine)
 [![Node](https://img.shields.io/node/v/swarm-engine)](https://nodejs.org)
 [![License: MIT](https://img.shields.io/badge/License-MIT-blue.svg)](https://opensource.org/licenses/MIT)
-[![Tests](https://img.shields.io/badge/tests-871%20passing-brightgreen)]()
+[![Tests](https://img.shields.io/badge/tests-1278%20passing-brightgreen)]()
 
 **Your agents. Orchestrated.**
 
-Coordinate multiple AI agents working on your code - researching, implementing, reviewing, testing - with an intelligent planner that learns from every run.
+The first self-aware AI orchestration engine. A 16-module ML pipeline -- built in pure TypeScript with zero external ML dependencies -- that predicts its own failures, explains them causally, and evolves its own rules. Underneath: 26 agents, 7 composable patterns, and a persistent knowledge graph that compounds intelligence across every run.
 
-Works with Claude Code, OpenAI Codex, and Google Gemini CLI. Mix models across agents in the same orchestration.
+Works with Claude Code, OpenAI Codex, Google Gemini CLI, and Vercel AI SDK. Mix models across agents in the same orchestration.
 
 ## What It Looks Like
 
@@ -169,11 +169,39 @@ import {
   AgentRegistry,     // Load and manage agent definitions
   EventBus,          // Typed event system for monitoring
   PatternRegistry,   // Composable orchestration patterns
-  BackendRegistry,   // Multi-backend (Claude, Codex, Gemini)
+  BackendRegistry,   // Multi-backend (Claude, Codex, Gemini, Vercel AI)
   CostModel,         // Estimate token costs before running
   ModelRouter,       // UCB1-based model selection
   TemplateRegistry,  // Save and replay successful workflows
 } from 'swarm-engine';
+
+// Tier 1: Core Graph
+import {
+  ExecutionGraph,          // Persistent execution knowledge graph
+  GraphLearner,            // Cross-run pattern learning
+  GraphContextRouter,      // Relevance-scored context assembly
+  GraphAnalyzer,           // Topology analysis and failure prediction
+  ReviewFeedbackRecorder,  // Review findings into graph
+} from 'swarm-engine';
+
+// Tier 2: Advanced ML
+import {
+  CausalGraphEngine,              // Do-calculus causal inference
+  FailurePropagationPredictor,    // 3-layer GNN failure prediction
+  AdversarialEvolver,             // Thompson sampling red-team
+  MetaPatternSelector,            // TF-IDF + logistic pattern recommendation
+  PredictiveDropout,              // Active learning agent dropout
+} from 'swarm-engine';
+
+// Tier 3: Self-Aware Engine
+import {
+  PatternSynthesizer,     // Topology diff → novel patterns
+  TrajectoryPredictor,    // Mid-run success prediction
+  MetaAdversarialTester,  // Red-teams the engine's own ML
+  RuleEvolver,            // Self-evolving replanning rules
+  TaskDiscovery,          // Mines failure patterns for tasks
+  OrchestrationEmbedder,  // Topology embeddings for transfer learning
+} from 'swarm-engine';
 ```
 
 See [src/index.ts](src/index.ts) for the full export surface.
@@ -184,12 +212,14 @@ Tools like Claude Code already let you spawn parallel agents with teams. That's
 
 It gives you composable patterns, cost-aware planning, specialized agent definitions, and a memory system that improves with every run. Think of it as the orchestration layer that turns ad-hoc multi-agent work into repeatable workflows.
 
+- **Self-aware ML pipeline** - the engine predicts its own failures (GNN), explains them causally (do-calculus), and evolves its own replanning rules. All in pure TypeScript, zero external ML dependencies.
+- **16 graph modules across 3 tiers** - persistent knowledge graph, causal inference, GNN failure propagation, trajectory prediction, orchestration embeddings, and self-evolving rules.
 - **7 composable patterns** - hybrid, TDD, red-team, spike, discover, review-cycle, research. Compose them: `--pattern "tdd | red-team"`. Plus 12 slash commands including postmortem, diff-review, and fix-pr.
 - **Intelligent planner** - cost-based optimization, adaptive execution, learns from every run
 - **Mix any backend** - Claude for implementation, Codex for review, Gemini for research. Different model per agent.
 - **Reusable templates** - save successful workflows, run them again with different parameters
 - **26 specialized agents** - 16 core roles plus 10 focused reviewers (security, performance, data integrity, API contracts, testing, accessibility, dependencies, error handling, concurrency, documentation)
-- **871 tests** - 4 rounds of security review, clean on all adversarial attack vectors
+- **1,278 tests across 76 files** - 4 rounds of security review, clean on all adversarial attack vectors
 
 ## Templates
 
@@ -305,9 +335,17 @@ swarm convert --to opencode   # OpenCode agents
 swarm convert --to windsurf   # Windsurf skills
 ```
 
-## Memory
+## Memory and Knowledge Graph Intelligence
+
+SQLite-backed knowledge base with full-text search, plus a 3-tier Execution Knowledge Graph that records every orchestration as a persistent, queryable topology. Syncs to Obsidian vault for cross-machine access.
+
+**Tier 1 -- Core Graph.** ExecutionGraph records orchestration topology. GraphLearner extracts cross-run patterns. GraphContextRouter replaces dump-everything context with relevance-scored assembly. GraphAnalyzer detects god nodes, bottlenecks, and topology risks.
+
+**Tier 2 -- Advanced ML.** CausalGraphEngine applies do-calculus to estimate treatment effects and suggest interventions. FailurePropagationPredictor uses a 3-layer GNN to predict which nodes are at risk before execution starts. MetaPatternSelector recommends orchestration patterns via TF-IDF + logistic regression. PredictiveDropout uses active learning to skip redundant agents.
+
+**Tier 3 -- Self-Aware Engine.** PatternSynthesizer generates novel orchestration patterns from topology diffs. TrajectoryPredictor forecasts orchestration success mid-run. RuleEvolver proposes and backtests its own replanning rules from historical failures. TaskDiscovery mines the graph for actionable tasks. OrchestrationEmbedder produces topology-based embeddings for similarity search and transfer learning. MetaAdversarialTester red-teams the engine's own ML subsystems.
 
-SQLite-backed knowledge base with full-text search. Syncs to Obsidian vault for cross-machine access. The engine learns from every run and compounds knowledge over time.
+All ML is implemented in pure TypeScript with zero external ML dependencies.
 
 ```bash
 swarm memory search "authentication"

package/dist/cli/commands/memory.js

@@ -102,6 +102,123 @@ memoryCommand
         memory.close();
     }
 });
+memoryCommand
+    .command('get <id>')
+    .description('Show full details of a memory entry')
+    .action((idStr) => {
+    const id = parseInt(idStr, 10);
+    if (isNaN(id)) {
+        console.error(chalk.red('Invalid ID.'));
+        process.exit(1);
+    }
+    const memory = new SwarmMemory();
+    try {
+        const entry = memory.get(id);
+        if (!entry) {
+            console.error(chalk.red(`Entry #${id} not found.`));
+            process.exit(1);
+        }
+        console.log();
+        console.log(`  ${chalk.bold(entry.title)} ${chalk.dim(`[${entry.type}]`)}`);
+        console.log(chalk.dim(`  id: ${entry.id}`));
+        if (entry.repo)
+            console.log(chalk.dim(`  repo: ${entry.repo}`));
+        if (entry.tags?.length)
+            console.log(chalk.dim(`  tags: ${entry.tags.join(', ')}`));
+        if (entry.created_at)
+            console.log(chalk.dim(`  created: ${entry.created_at}`));
+        if (entry.updated_at)
+            console.log(chalk.dim(`  updated: ${entry.updated_at}`));
+        console.log();
+        console.log(entry.content);
+        console.log();
+    }
+    finally {
+        memory.close();
+    }
+});
+memoryCommand
+    .command('delete <id>')
+    .description('Delete a memory entry')
+    .action((idStr) => {
+    const id = parseInt(idStr, 10);
+    if (isNaN(id)) {
+        console.error(chalk.red('Invalid ID.'));
+        process.exit(1);
+    }
+    const memory = new SwarmMemory();
+    try {
+        const entry = memory.get(id);
+        if (!entry) {
+            console.error(chalk.red(`Entry #${id} not found.`));
+            process.exit(1);
+        }
+        memory.delete(id);
+        console.log(chalk.green(`Deleted: ${entry.title} (id: ${id})`));
+    }
+    finally {
+        memory.close();
+    }
+});
+memoryCommand
+    .command('purge')
+    .description('Bulk delete entries matching filters')
+    .option('--before <date>', 'Delete entries created before this date (YYYY-MM-DD)')
+    .option('-t, --type <type>', 'Filter by type')
+    .option('-r, --repo <repo>', 'Filter by repo')
+    .option('--dry-run', 'Show what would be deleted without deleting')
+    .action((options) => {
+    if (!options.before && !options.type && !options.repo) {
+        console.error(chalk.red('At least one filter required: --before, --type, or --repo'));
+        process.exit(1);
+    }
+    const memory = new SwarmMemory();
+    try {
+        const result = memory.purge({
+            before: options.before,
+            type: options.type,
+            repo: options.repo,
+            dryRun: options.dryRun,
+        });
+        if (options.dryRun) {
+            console.log(chalk.cyan(`Would delete ${result.deleted} entry(ies):`));
+            if (result.entries) {
+                for (const e of result.entries) {
+                    console.log(`  ${chalk.dim(`#${e.id}`)} ${e.title} ${chalk.dim(`[${e.type}]`)}`);
+                }
+            }
+        }
+        else {
+            console.log(chalk.green(`Deleted ${result.deleted} entry(ies).`));
+        }
+    }
+    finally {
+        memory.close();
+    }
+});
+memoryCommand
+    .command('prune')
+    .description('Auto-deduplicate: keep newest entry per title, remove older duplicates')
+    .option('-t, --type <type>', 'Filter by type')
+    .option('--dry-run', 'Show what would be pruned without pruning')
+    .action((options) => {
+    const memory = new SwarmMemory();
+    try {
+        const result = memory.prune({
+            type: options.type,
+            dryRun: options.dryRun,
+        });
+        if (options.dryRun) {
+            console.log(chalk.cyan(`Would prune ${result.pruned} duplicate(s), keeping ${result.kept} entry(ies).`));
+        }
+        else {
+            console.log(chalk.green(`Pruned ${result.pruned} duplicate(s), kept ${result.kept} entry(ies).`));
+        }
+    }
+    finally {
+        memory.close();
+    }
+});
 memoryCommand
     .command('stats')
     .description('Show memory statistics')

package/dist/cli/commands/memory.js.map

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package/dist/core/types.d.ts

@@ -172,4 +172,34 @@ export declare function emptyUsageStats(): UsageStats;
  */
 export declare function mergeUsageStats(a: UsageStats, b: UsageStats): UsageStats;
 export declare function generateId(): string;
+export interface PhaseGateResult {
+    result: 'pass' | 'warn' | 'halt';
+    reason: string;
+    confidence: 'high' | 'medium' | 'low';
+    historicalSuccessRate?: number;
+}
+export interface PhaseGateConfig {
+    haltOnLowConfidence: boolean;
+    warnOnMediumConfidence: boolean;
+    minHistoricalSuccessRate: number;
+}
+export type GraphNodeType = 'orchestration' | 'phase' | 'agent' | 'file' | 'pattern' | 'error' | 'heuristic';
+export type GraphEdgeType = 'contains' | 'spawned' | 'produced' | 'consumed' | 'used_pattern' | 'touched_file' | 'caused_by' | 'learned_from' | 'similar_to' | 'co_modified';
+export type ConfidenceTier = 'EXTRACTED' | 'INFERRED' | 'AMBIGUOUS';
+export interface GraphNode {
+    id: string;
+    type: GraphNodeType;
+    label: string;
+    properties: Record<string, unknown>;
+    created_at: string;
+}
+export interface GraphEdge {
+    source: string;
+    target: string;
+    type: GraphEdgeType;
+    weight: number;
+    confidence: ConfidenceTier;
+    properties: Record<string, unknown>;
+    created_at: string;
+}
 //# sourceMappingURL=types.d.ts.map

package/dist/core/types.d.ts.map

@@ -1 +1 @@
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package/dist/index.d.ts

@@ -118,6 +118,19 @@ export { TraceStore, traceToMemoryEntries } from './runtime/traces.js';
 export type { ExecutionTrace, TracePhase } from './runtime/traces.js';
 export { HeuristicStore } from './runtime/heuristics.js';
 export type { Heuristic } from './runtime/heuristics.js';
+/** Execution Knowledge Graph — records orchestration topology as queryable nodes and edges */
+export { ExecutionGraph } from './runtime/execution-graph.js';
+/** Graph-based context routing for agents — replaces dump-everything with relevance-scored context */
+export { GraphContextRouter } from './runtime/graph-context-router.js';
+export type { ContextRouterOptions, ExecutionGraphReader } from './runtime/graph-context-router.js';
+/** Pre/post-execution graph analysis — god nodes, centrality, failure prediction, topology suggestions */
+export { GraphAnalyzer } from './runtime/graph-analyzer.js';
+export type { GraphAnalyzable, GodNode, FailurePrediction, TopologySuggestion } from './runtime/graph-analyzer.js';
+/** Cross-run learning from the execution graph — pattern stats, file co-modification, agent performance */
+export { GraphLearner, extractFileReferences } from './runtime/graph-learner.js';
+export type { PatternStats, FileCoModification, AgentFilePerformance } from './runtime/graph-learner.js';
+/** Review feedback recorder — records review findings into the graph for cross-run learning */
+export { ReviewFeedbackRecorder } from './runtime/graph-feedback.js';
 export { KnowledgeCompounder, PROBLEM_CATEGORIES } from './runtime/compounder.js';
 export type { SolutionDoc, ProblemCategory } from './runtime/compounder.js';
 /**
@@ -141,4 +154,37 @@ export type { SmartError } from './utils/errors.js';
 export { setOutputMode, isJsonMode, isQuietMode, print, printJson, printDim } from './utils/output.js';
 export { parseReviewOutput, applyConfidenceGate, evaluateGate, summarizeFindings, formatFindings, DEFAULT_GATE_CONFIG, } from './runtime/review-schema.js';
 export type { ReviewFinding, ReviewReport, ReviewSummary, ReviewGateConfig, Severity, AutofixClass, } from './runtime/review-schema.js';
+/** Causal inference engine — estimates treatment effects and suggests interventions from the execution graph */
+export { CausalGraphEngine } from './runtime/graph-causal.js';
+export type { CausalEstimate, InterventionSuggestion } from './runtime/graph-causal.js';
+/** GNN-based failure propagation predictor — predicts which nodes are at risk before execution */
+export { FailurePropagationPredictor, Matrix } from './runtime/graph-gnn.js';
+export type { PropagationRisk, CircuitBreaker, GNNWeights } from './runtime/graph-gnn.js';
+/** Adversarial red-team evolver — Thompson sampling over attack categories to find vulnerabilities */
+export { AdversarialEvolver } from './runtime/graph-adversarial.js';
+export type { AttackCategory, AttackStrategy, DefenseStrategy, VulnerabilityHeat } from './runtime/graph-adversarial.js';
+/** Meta-pattern selector — TF-IDF + logistic regression to recommend orchestration patterns */
+export { MetaPatternSelector } from './runtime/graph-meta.js';
+export type { PatternRecommendation, TfIdfModel } from './runtime/graph-meta.js';
+/** Predictive dropout — ML-based agent dropout to skip redundant agents */
+export { PredictiveDropout } from './runtime/graph-dropout.js';
+export type { DropoutRecommendation, DropoutModel, ContributionStats } from './runtime/graph-dropout.js';
+/** Pattern synthesizer — topology diff analysis to generate novel orchestration patterns */
+export { PatternSynthesizer } from './runtime/graph-synthesis.js';
+export type { SynthesizedPattern, TopologyInsight, PhaseSpec } from './runtime/graph-synthesis.js';
+/** Trajectory predictor — online logistic regression to predict orchestration success mid-run */
+export { TrajectoryPredictor } from './runtime/graph-trajectory.js';
+export type { TrajectoryFeatures, TrajectoryPrediction, PhaseForecast, TrajectoryForecast } from './runtime/graph-trajectory.js';
+/** Meta-adversarial tester — red-teams the engine's own ML subsystems for sensitivity vulnerabilities */
+export { MetaAdversarialTester } from './runtime/graph-meta-adversarial.js';
+export type { Vulnerability, SelfAuditReport } from './runtime/graph-meta-adversarial.js';
+/** Rule evolver — backtested rule proposals from historical failure patterns */
+export { RuleEvolver } from './runtime/graph-self-evolve.js';
+export type { EvolvedRule, RuleProposal, BacktestResult } from './runtime/graph-self-evolve.js';
+/** Task discovery — mines execution graph for actionable tasks from failure patterns */
+export { TaskDiscovery } from './runtime/graph-discovery.js';
+export type { DiscoveredTask, FileRisk } from './runtime/graph-discovery.js';
+/** Orchestration embedder — topology-based embeddings for similarity search and transfer learning */
+export { OrchestrationEmbedder } from './runtime/graph-embeddings.js';
+export type { SimilarOrchestration, TransferRecommendation } from './runtime/graph-embeddings.js';
 //# sourceMappingURL=index.d.ts.map

package/dist/index.d.ts.map

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package/dist/index.js

@@ -87,6 +87,16 @@ export { toCompact, fromCompact, estimateSavings as estimateCompactSavings } fro
 export { ReflectionEngine } from './runtime/reflexion.js';
 export { TraceStore, traceToMemoryEntries } from './runtime/traces.js';
 export { HeuristicStore } from './runtime/heuristics.js';
+/** Execution Knowledge Graph — records orchestration topology as queryable nodes and edges */
+export { ExecutionGraph } from './runtime/execution-graph.js';
+/** Graph-based context routing for agents — replaces dump-everything with relevance-scored context */
+export { GraphContextRouter } from './runtime/graph-context-router.js';
+/** Pre/post-execution graph analysis — god nodes, centrality, failure prediction, topology suggestions */
+export { GraphAnalyzer } from './runtime/graph-analyzer.js';
+/** Cross-run learning from the execution graph — pattern stats, file co-modification, agent performance */
+export { GraphLearner, extractFileReferences } from './runtime/graph-learner.js';
+/** Review feedback recorder — records review findings into the graph for cross-run learning */
+export { ReviewFeedbackRecorder } from './runtime/graph-feedback.js';
 export { KnowledgeCompounder, PROBLEM_CATEGORIES } from './runtime/compounder.js';
 /**
  * Registry for reusable orchestration templates. Save successful runs as named
@@ -102,4 +112,26 @@ export { AgentFrontmatterSchema, TemplateConfigSchema } from './utils/schemas.js
 export { formatError, didYouMean } from './utils/errors.js';
 export { setOutputMode, isJsonMode, isQuietMode, print, printJson, printDim } from './utils/output.js';
 export { parseReviewOutput, applyConfidenceGate, evaluateGate, summarizeFindings, formatFindings, DEFAULT_GATE_CONFIG, } from './runtime/review-schema.js';
+/** Causal inference engine — estimates treatment effects and suggests interventions from the execution graph */
+export { CausalGraphEngine } from './runtime/graph-causal.js';
+/** GNN-based failure propagation predictor — predicts which nodes are at risk before execution */
+export { FailurePropagationPredictor, Matrix } from './runtime/graph-gnn.js';
+/** Adversarial red-team evolver — Thompson sampling over attack categories to find vulnerabilities */
+export { AdversarialEvolver } from './runtime/graph-adversarial.js';
+/** Meta-pattern selector — TF-IDF + logistic regression to recommend orchestration patterns */
+export { MetaPatternSelector } from './runtime/graph-meta.js';
+/** Predictive dropout — ML-based agent dropout to skip redundant agents */
+export { PredictiveDropout } from './runtime/graph-dropout.js';
+/** Pattern synthesizer — topology diff analysis to generate novel orchestration patterns */
+export { PatternSynthesizer } from './runtime/graph-synthesis.js';
+/** Trajectory predictor — online logistic regression to predict orchestration success mid-run */
+export { TrajectoryPredictor } from './runtime/graph-trajectory.js';
+/** Meta-adversarial tester — red-teams the engine's own ML subsystems for sensitivity vulnerabilities */
+export { MetaAdversarialTester } from './runtime/graph-meta-adversarial.js';
+/** Rule evolver — backtested rule proposals from historical failure patterns */
+export { RuleEvolver } from './runtime/graph-self-evolve.js';
+/** Task discovery — mines execution graph for actionable tasks from failure patterns */
+export { TaskDiscovery } from './runtime/graph-discovery.js';
+/** Orchestration embedder — topology-based embeddings for similarity search and transfer learning */
+export { OrchestrationEmbedder } from './runtime/graph-embeddings.js';
 //# sourceMappingURL=index.js.map

package/dist/index.js.map

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package/dist/memory/index.d.ts

@@ -6,6 +6,8 @@ export interface MemoryEntry {
     tags?: string[];
     repo?: string;
     source?: string;
+    created_at?: string;
+    updated_at?: string;
 }
 export interface SearchResult {
     id: number;
@@ -98,6 +100,41 @@ export declare class SwarmMemory {
         byType: Record<string, number>;
         byRepo: Record<string, number>;
     };
+    /**
+     * Bulk delete entries matching criteria.
+     * At least one filter is required to prevent accidental wipe-all.
+     */
+    purge(options: {
+        before?: string;
+        type?: string;
+        repo?: string;
+        dryRun?: boolean;
+    }): {
+        deleted: number;
+        entries?: MemoryEntry[];
+    };
+    /**
+     * Find entries with duplicate titles.
+     * Returns groups where count > 1, ordered by count descending.
+     */
+    findDuplicates(options?: {
+        type?: string;
+    }): Array<{
+        title: string;
+        count: number;
+        ids: number[];
+    }>;
+    /**
+     * Auto-clean duplicates: for each group of entries sharing the same title,
+     * keep the newest (highest ID), mark older ones with superseded_by, then delete them.
+     */
+    prune(options?: {
+        type?: string;
+        dryRun?: boolean;
+    }): {
+        pruned: number;
+        kept: number;
+    };
     /**
      * Close the database.
      */

package/dist/memory/index.d.ts.map

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