scientify 1.13.5 → 2.0.0

package/dist/src/commands/metabolism-status.js

@@ -1,103 +1,100 @@
 import * as fs from "node:fs";
 import * as path from "node:path";
 import * as os from "node:os";
-const WORKSPACE_ROOT = path.join(os.homedir(), ".openclaw", "workspace", "projects");
-function getActiveProject() {
-    const activePath = path.join(WORKSPACE_ROOT, ".active");
+const OPENCLAW_HOME = path.join(os.homedir(), ".openclaw");
+/**
+ * Find the research project workspace for the current agent context.
+ * In a Feishu group bound to a project agent, the workspace is at
+ * ~/.openclaw/workspace-research-{id}/
+ */
+function findProjectWorkspace() {
+    // Read openclaw.json to find research agents
+    const configPath = path.join(OPENCLAW_HOME, "openclaw.json");
+    let config;
     try {
-        return fs.readFileSync(activePath, "utf-8").trim();
+        config = JSON.parse(fs.readFileSync(configPath, "utf-8"));
     }
     catch {
         return null;
     }
+    const agents = config.agents?.list ?? [];
+    const researchAgents = agents.filter((a) => a.id.startsWith("research-"));
+    // Try each research agent workspace to find one with metabolism/config.json
+    for (const agent of researchAgents) {
+        const workspace = (agent.workspace ?? `~/.openclaw/workspace-${agent.id}`).replace("~", os.homedir());
+        const metabolismConfig = path.join(workspace, "metabolism", "config.json");
+        if (fs.existsSync(metabolismConfig)) {
+            return { workspace, projectId: agent.id.replace("research-", "") };
+        }
+    }
+    // If only one research agent, use it even without config.json (pre-bootstrap)
+    if (researchAgents.length === 1) {
+        const agent = researchAgents[0];
+        const workspace = (agent.workspace ?? `~/.openclaw/workspace-${agent.id}`).replace("~", os.homedir());
+        return { workspace, projectId: agent.id.replace("research-", "") };
+    }
+    return null;
 }
-function listProjects() {
+function readMetabolismConfig(workspace) {
     try {
-        return fs
-            .readdirSync(WORKSPACE_ROOT, { withFileTypes: true })
-            .filter((d) => d.isDirectory() && !d.name.startsWith("."))
-            .map((d) => d.name)
-            .sort();
+        return JSON.parse(fs.readFileSync(path.join(workspace, "metabolism", "config.json"), "utf-8"));
     }
     catch {
-        return [];
+        return null;
     }
 }
-function readKnowledgeState(projectId) {
-    const file = path.join(WORKSPACE_ROOT, projectId, "knowledge_state", "state.json");
-    if (!fs.existsSync(file))
-        return null;
+function countFiles(dirPath, filter) {
     try {
-        const raw = fs.readFileSync(file, "utf-8");
-        return JSON.parse(raw);
+        const entries = fs.readdirSync(dirPath);
+        return filter ? entries.filter(filter).length : entries.length;
     }
     catch {
-        return null;
+        return 0;
     }
 }
-/**
- * /metabolism-status — compatibility alias of continuous research engine status.
- */
-export function handleMetabolismStatus(ctx) {
-    const requested = (ctx.args ?? "").trim();
-    const projectId = requested || getActiveProject() || listProjects()[0];
-    if (!projectId) {
-        return {
-            text: "No project found. Use /research-subscribe with --project, or create a project under ~/.openclaw/workspace/projects/.",
-        };
+function readRecentDiffs(workspace, count) {
+    const diffsDir = path.join(workspace, "metabolism", "diffs");
+    try {
+        return fs
+            .readdirSync(diffsDir)
+            .filter((f) => f.endsWith(".md"))
+            .sort()
+            .slice(-count);
     }
-    const data = readKnowledgeState(projectId);
-    if (!data?.streams || Object.keys(data.streams).length === 0) {
-        return {
-            text: `**Continuous Research Engine Status — ${projectId}**\n\n` +
-                "No knowledge_state runs yet. Trigger a research run first.\n\n" +
-                "(Compatibility note: /metabolism-status is an alias view over knowledge_state.)",
-        };
+    catch {
+        return [];
     }
-    const streams = Object.values(data.streams);
-    let totalRuns = 0;
-    let totalHypotheses = 0;
-    let totalPaperNotes = 0;
-    let latest = null;
-    let latestTs = 0;
-    for (const stream of streams) {
-        totalRuns += Number.isFinite(stream.totalRuns) ? Math.max(0, Math.floor(stream.totalRuns)) : 0;
-        totalHypotheses += Number.isFinite(stream.totalHypotheses) ? Math.max(0, Math.floor(stream.totalHypotheses)) : 0;
-        totalPaperNotes += Array.isArray(stream.paperNotes) ? stream.paperNotes.length : 0;
-        const ts = Number.isFinite(stream.lastRunAtMs) ? Math.floor(stream.lastRunAtMs) : 0;
-        if (ts >= latestTs) {
-            latestTs = ts;
-            latest = stream;
-        }
+}
+/**
+ * /metabolism-status — Show knowledge metabolism status
+ */
+export function handleMetabolismStatus(_ctx) {
+    const project = findProjectWorkspace();
+    if (!project) {
+        return { text: "No research project found. Use `openclaw research init <id>` to create one." };
     }
-    const runProfile = latest?.lastRunProfile ?? "fast";
-    const trigger = latest?.triggerState;
-    const gate = latest?.lastQualityGate;
-    let output = `**Continuous Research Engine Status — ${projectId}**\n\n`;
-    output += `- Streams: ${streams.length}\n`;
-    output += `- Total runs: ${totalRuns}\n`;
-    output += `- Total hypotheses: ${totalHypotheses}\n`;
-    output += `- Total paper notes: ${totalPaperNotes}\n`;
-    output += `- Latest run profile: ${runProfile}\n`;
-    output += `- Latest status: ${latest?.lastStatus ?? "(unknown)"}\n`;
-    output += `- Latest run: ${latestTs > 0 ? new Date(latestTs).toISOString() : "(none)"}\n`;
-    if (trigger) {
-        output += `\n**Trigger State**\n`;
-        output += `- Consecutive NEW/REVISE days: ${trigger.consecutiveNewReviseDays ?? 0}\n`;
-        output += `- BRIDGE count (7d): ${trigger.bridgeCount7d ?? 0}\n`;
-        output += `- Unread core backlog: ${trigger.unreadCoreBacklog ?? 0}\n`;
+    const { workspace, projectId } = project;
+    const config = readMetabolismConfig(workspace);
+    const topicCount = countFiles(path.join(workspace, "metabolism", "knowledge"), (f) => f.startsWith("topic-"));
+    const hypothesisCount = countFiles(path.join(workspace, "metabolism", "hypotheses"), (f) => f.endsWith(".md"));
+    const recentDiffs = readRecentDiffs(workspace, 3);
+    let output = `**Metabolism Status — ${projectId}**\n\n`;
+    if (!config) {
+        output += "Status: Pending BOOTSTRAP configuration\n";
+        output += "Send a message in this group to start the configuration flow.\n";
+        return { text: output };
     }
-    if (gate) {
-        output += `\n**Quality Gate**\n`;
-        output += `- Passed: ${gate.passed ? "yes" : "no"}\n`;
-        output += `- Full-text coverage: ${gate.fullTextCoveragePct ?? 0}%\n`;
-        output += `- Evidence binding: ${gate.evidenceBindingRatePct ?? 0}%\n`;
-        output += `- Citation error: ${gate.citationErrorRatePct ?? 0}%\n`;
-        if (Array.isArray(gate.reasons) && gate.reasons.length > 0) {
-            output += `- Reasons: ${gate.reasons.join("; ")}\n`;
+    const heartbeatStatus = config.heartbeat?.enabled !== false ? "active" : "paused";
+    output += `Day: ${config.currentDay}\n`;
+    output += `Topics: ${topicCount}\n`;
+    output += `Hypotheses: ${hypothesisCount}\n`;
+    output += `Heartbeat: ${heartbeatStatus}\n`;
+    if (recentDiffs.length > 0) {
+        output += `\nRecent diffs:\n`;
+        for (const diff of recentDiffs) {
+            output += `  ${diff}\n`;
         }
     }
-    output += "\n(Compatibility note: /metabolism-status is an alias view over knowledge_state.)";
     return { text: output };
 }
 //# sourceMappingURL=metabolism-status.js.map

package/dist/src/commands/metabolism-status.js.map

@@ -1 +1 @@
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+{"version":3,"file":"metabolism-status.js","sourceRoot":"","sources":["../../../src/commands/metabolism-status.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,MAAM,SAAS,CAAC;AAC9B,OAAO,KAAK,IAAI,MAAM,WAAW,CAAC;AAClC,OAAO,KAAK,EAAE,MAAM,SAAS,CAAC;AAG9B,MAAM,aAAa,GAAG,IAAI,CAAC,IAAI,CAAC,EAAE,CAAC,OAAO,EAAE,EAAE,WAAW,CAAC,CAAC;AAQ3D;;;;GAIG;AACH,SAAS,oBAAoB;IAC3B,6CAA6C;IAC7C,MAAM,UAAU,GAAG,IAAI,CAAC,IAAI,CAAC,aAAa,EAAE,eAAe,CAAC,CAAC;IAC7D,IAAI,MAA+B,CAAC;IACpC,IAAI,CAAC;QACH,MAAM,GAAG,IAAI,CAAC,KAAK,CAAC,EAAE,CAAC,YAAY,CAAC,UAAU,EAAE,OAAO,CAAC,CAAC,CAAC;IAC5D,CAAC;IAAC,MAAM,CAAC;QACP,OAAO,IAAI,CAAC;IACd,CAAC;IAED,MAAM,MAAM,GAAI,MAAM,CAAC,MAA+D,EAAE,IAAI,IAAI,EAAE,CAAC;IACnG,MAAM,cAAc,GAAG,MAAM,CAAC,MAAM,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,EAAE,CAAC,UAAU,CAAC,WAAW,CAAC,CAAC,CAAC;IAE1E,4EAA4E;IAC5E,KAAK,MAAM,KAAK,IAAI,cAAc,EAAE,CAAC;QACnC,MAAM,SAAS,GAAG,CAAC,KAAK,CAAC,SAAS,IAAI,yBAAyB,KAAK,CAAC,EAAE,EAAE,CAAC,CAAC,OAAO,CAAC,GAAG,EAAE,EAAE,CAAC,OAAO,EAAE,CAAC,CAAC;QACtG,MAAM,gBAAgB,GAAG,IAAI,CAAC,IAAI,CAAC,SAAS,EAAE,YAAY,EAAE,aAAa,CAAC,CAAC;QAC3E,IAAI,EAAE,CAAC,UAAU,CAAC,gBAAgB,CAAC,EAAE,CAAC;YACpC,OAAO,EAAE,SAAS,EAAE,SAAS,EAAE,KAAK,CAAC,EAAE,CAAC,OAAO,CAAC,WAAW,EAAE,EAAE,CAAC,EAAE,CAAC;QACrE,CAAC;IACH,CAAC;IAED,8EAA8E;IAC9E,IAAI,cAAc,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;QAChC,MAAM,KAAK,GAAG,cAAc,CAAC,CAAC,CAAC,CAAC;QAChC,MAAM,SAAS,GAAG,CAAC,KAAK,CAAC,SAAS,IAAI,yBAAyB,KAAK,CAAC,EAAE,EAAE,CAAC,CAAC,OAAO,CAAC,GAAG,EAAE,EAAE,CAAC,OAAO,EAAE,CAAC,CAAC;QACtG,OAAO,EAAE,SAAS,EAAE,SAAS,EAAE,KAAK,CAAC,EAAE,CAAC,OAAO,CAAC,WAAW,EAAE,EAAE,CAAC,EAAE,CAAC;IACrE,CAAC;IAED,OAAO,IAAI,CAAC;AACd,CAAC;AAED,SAAS,oBAAoB,CAAC,SAAiB;IAC7C,IAAI,CAAC;QACH,OAAO,IAAI,CAAC,KAAK,CAAC,EAAE,CAAC,YAAY,CAAC,IAAI,CAAC,IAAI,CAAC,SAAS,EAAE,YAAY,EAAE,aAAa,CAAC,EAAE,OAAO,CAAC,CAAC,CAAC;IACjG,CAAC;IAAC,MAAM,CAAC;QACP,OAAO,IAAI,CAAC;IACd,CAAC;AACH,CAAC;AAED,SAAS,UAAU,CAAC,OAAe,EAAE,MAAkC;IACrE,IAAI,CAAC;QACH,MAAM,OAAO,GAAG,EAAE,CAAC,WAAW,CAAC,OAAO,CAAC,CAAC;QACxC,OAAO,MAAM,CAAC,CAAC,CAAC,OAAO,CAAC,MAAM,CAAC,MAAM,CAAC,CAAC,MAAM,CAAC,CAAC,CAAC,OAAO,CAAC,MAAM,CAAC;IACjE,CAAC;IAAC,MAAM,CAAC;QACP,OAAO,CAAC,CAAC;IACX,CAAC;AACH,CAAC;AAED,SAAS,eAAe,CAAC,SAAiB,EAAE,KAAa;IACvD,MAAM,QAAQ,GAAG,IAAI,CAAC,IAAI,CAAC,SAAS,EAAE,YAAY,EAAE,OAAO,CAAC,CAAC;IAC7D,IAAI,CAAC;QACH,OAAO,EAAE;aACN,WAAW,CAAC,QAAQ,CAAC;aACrB,MAAM,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAC;aAChC,IAAI,EAAE;aACN,KAAK,CAAC,CAAC,KAAK,CAAC,CAAC;IACnB,CAAC;IAAC,MAAM,CAAC;QACP,OAAO,EAAE,CAAC;IACZ,CAAC;AACH,CAAC;AAED;;GAEG;AACH,MAAM,UAAU,sBAAsB,CAAC,IAA0B;IAC/D,MAAM,OAAO,GAAG,oBAAoB,EAAE,CAAC;IACvC,IAAI,CAAC,OAAO,EAAE,CAAC;QACb,OAAO,EAAE,IAAI,EAAE,6EAA6E,EAAE,CAAC;IACjG,CAAC;IAED,MAAM,EAAE,SAAS,EAAE,SAAS,EAAE,GAAG,OAAO,CAAC;IACzC,MAAM,MAAM,GAAG,oBAAoB,CAAC,SAAS,CAAC,CAAC;IAE/C,MAAM,UAAU,GAAG,UAAU,CAC3B,IAAI,CAAC,IAAI,CAAC,SAAS,EAAE,YAAY,EAAE,WAAW,CAAC,EAC/C,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,UAAU,CAAC,QAAQ,CAAC,CAC9B,CAAC;IACF,MAAM,eAAe,GAAG,UAAU,CAChC,IAAI,CAAC,IAAI,CAAC,SAAS,EAAE,YAAY,EAAE,YAAY,CAAC,EAChD,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,QAAQ,CAAC,KAAK,CAAC,CACzB,CAAC;IACF,MAAM,WAAW,GAAG,eAAe,CAAC,SAAS,EAAE,CAAC,CAAC,CAAC;IAElD,IAAI,MAAM,GAAG,yBAAyB,SAAS,QAAQ,CAAC;IAExD,IAAI,CAAC,MAAM,EAAE,CAAC;QACZ,MAAM,IAAI,2CAA2C,CAAC;QACtD,MAAM,IAAI,iEAAiE,CAAC;QAC5E,OAAO,EAAE,IAAI,EAAE,MAAM,EAAE,CAAC;IAC1B,CAAC;IAED,MAAM,eAAe,GAAG,MAAM,CAAC,SAAS,EAAE,OAAO,KAAK,KAAK,CAAC,CAAC,CAAC,QAAQ,CAAC,CAAC,CAAC,QAAQ,CAAC;IAElF,MAAM,IAAI,QAAQ,MAAM,CAAC,UAAU,IAAI,CAAC;IACxC,MAAM,IAAI,WAAW,UAAU,IAAI,CAAC;IACpC,MAAM,IAAI,eAAe,eAAe,IAAI,CAAC;IAC7C,MAAM,IAAI,cAAc,eAAe,IAAI,CAAC;IAE5C,IAAI,WAAW,CAAC,MAAM,GAAG,CAAC,EAAE,CAAC;QAC3B,MAAM,IAAI,mBAAmB,CAAC;QAC9B,KAAK,MAAM,IAAI,IAAI,WAAW,EAAE,CAAC;YAC/B,MAAM,IAAI,KAAK,IAAI,IAAI,CAAC;QAC1B,CAAC;IACH,CAAC;IAED,OAAO,EAAE,IAAI,EAAE,MAAM,EAAE,CAAC;AAC1B,CAAC"}

package/dist/src/commands.d.ts

@@ -1,4 +1,4 @@
-import type { PluginCommandContext, PluginCommandResult } from "openclaw";
+import type { PluginCommandContext, PluginCommandResult } from "./types.js";
 /**
  * /research-status - Show workspace status
  */

package/dist/src/commands.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"commands.d.ts","sourceRoot":"","sources":["../../src/commands.ts"],"names":[],"mappings":"AAGA,OAAO,KAAK,EAAE,oBAAoB,EAAE,mBAAmB,EAAE,MAAM,UAAU,CAAC;AA6N1E;;GAEG;AACH,wBAAgB,oBAAoB,CAAC,IAAI,EAAE,oBAAoB,GAAG,mBAAmB,CA+DpF;AAED;;GAEG;AACH,wBAAgB,YAAY,CAAC,GAAG,EAAE,oBAAoB,GAAG,mBAAmB,CAiC3E;AAED;;GAEG;AACH,wBAAgB,WAAW,CAAC,GAAG,EAAE,oBAAoB,GAAG,mBAAmB,CA4B1E;AAED;;GAEG;AACH,wBAAgB,cAAc,CAAC,IAAI,EAAE,oBAAoB,GAAG,mBAAmB,CAqB9E;AAED;;GAEG;AACH,wBAAgB,mBAAmB,CAAC,GAAG,EAAE,oBAAoB,GAAG,mBAAmB,CAclF;AAED;;GAEG;AACH,wBAAgB,mBAAmB,CAAC,GAAG,EAAE,oBAAoB,GAAG,mBAAmB,CA+ClF"}
+{"version":3,"file":"commands.d.ts","sourceRoot":"","sources":["../../src/commands.ts"],"names":[],"mappings":"AAGA,OAAO,KAAK,EAAE,oBAAoB,EAAE,mBAAmB,EAAE,MAAM,YAAY,CAAC;AAwJ5E;;GAEG;AACH,wBAAgB,oBAAoB,CAAC,IAAI,EAAE,oBAAoB,GAAG,mBAAmB,CAmDpF;AAED;;GAEG;AACH,wBAAgB,YAAY,CAAC,GAAG,EAAE,oBAAoB,GAAG,mBAAmB,CAiC3E;AAED;;GAEG;AACH,wBAAgB,WAAW,CAAC,GAAG,EAAE,oBAAoB,GAAG,mBAAmB,CA4B1E;AAED;;GAEG;AACH,wBAAgB,cAAc,CAAC,IAAI,EAAE,oBAAoB,GAAG,mBAAmB,CAqB9E;AAED;;GAEG;AACH,wBAAgB,mBAAmB,CAAC,GAAG,EAAE,oBAAoB,GAAG,mBAAmB,CAclF;AAED;;GAEG;AACH,wBAAgB,mBAAmB,CAAC,GAAG,EAAE,oBAAoB,GAAG,mBAAmB,CA+ClF"}

package/dist/src/commands.js

@@ -92,9 +92,6 @@ function getKnowledgeStateSummary(projectId) {
         let recentNotFullTextReadCount = 0;
         let lastRunAtMs = 0;
         let lastStatus;
-        let lastQualityGatePassed;
-        let lastQualityGateReasons;
-        let lastChangeStat;
         for (const stream of streamEntries) {
             totalRuns += Number.isFinite(stream.totalRuns) ? Math.max(0, Math.floor(stream.totalRuns)) : 0;
             totalHypotheses += Number.isFinite(stream.totalHypotheses)
@@ -111,43 +108,6 @@ function getKnowledgeStateSummary(projectId) {
             if (runAt >= lastRunAtMs) {
                 lastRunAtMs = runAt;
                 lastStatus = stream.lastStatus;
-                if (stream.lastQualityGate && typeof stream.lastQualityGate === "object") {
-                    lastQualityGatePassed = stream.lastQualityGate.passed === true;
-                    if (Array.isArray(stream.lastQualityGate.reasons)) {
-                        lastQualityGateReasons = stream.lastQualityGate.reasons
-                            .filter((item) => typeof item === "string")
-                            .map((item) => item.trim())
-                            .filter((item) => item.length > 0)
-                            .slice(0, 5);
-                    }
-                    else {
-                        lastQualityGateReasons = undefined;
-                    }
-                }
-                else {
-                    lastQualityGatePassed = undefined;
-                    lastQualityGateReasons = undefined;
-                }
-                const firstChange = Array.isArray(stream.recentChangeStats) ? stream.recentChangeStats[0] : undefined;
-                if (firstChange && typeof firstChange === "object") {
-                    lastChangeStat = {
-                        newCount: typeof firstChange.newCount === "number" && Number.isFinite(firstChange.newCount)
-                            ? Math.max(0, Math.floor(firstChange.newCount))
-                            : 0,
-                        confirmCount: typeof firstChange.confirmCount === "number" && Number.isFinite(firstChange.confirmCount)
-                            ? Math.max(0, Math.floor(firstChange.confirmCount))
-                            : 0,
-                        reviseCount: typeof firstChange.reviseCount === "number" && Number.isFinite(firstChange.reviseCount)
-                            ? Math.max(0, Math.floor(firstChange.reviseCount))
-                            : 0,
-                        bridgeCount: typeof firstChange.bridgeCount === "number" && Number.isFinite(firstChange.bridgeCount)
-                            ? Math.max(0, Math.floor(firstChange.bridgeCount))
-                            : 0,
-                    };
-                }
-                else {
-                    lastChangeStat = undefined;
-                }
             }
         }
         return {
@@ -156,9 +116,6 @@ function getKnowledgeStateSummary(projectId) {
             totalPaperNotes,
             recentFullTextReadCount,
             recentNotFullTextReadCount,
-            ...(typeof lastQualityGatePassed === "boolean" ? { lastQualityGatePassed } : {}),
-            ...(lastQualityGateReasons && lastQualityGateReasons.length > 0 ? { lastQualityGateReasons } : {}),
-            ...(lastChangeStat ? { lastChangeStat } : {}),
             ...(lastRunAtMs > 0 ? { lastRunAtMs } : {}),
             ...(lastStatus ? { lastStatus } : {}),
             streamCount: streamEntries.length,
@@ -188,18 +145,6 @@ export function handleResearchStatus(_ctx) {
             output += `- recent full-text-read papers: ${knowledgeSummary.recentFullTextReadCount}\n`;
             output += `- recent not-full-text-read papers: ${knowledgeSummary.recentNotFullTextReadCount}\n`;
             output += `- last status: ${knowledgeSummary.lastStatus ?? "(unknown)"}\n`;
-            if (typeof knowledgeSummary.lastQualityGatePassed === "boolean") {
-                output += `- quality gate: ${knowledgeSummary.lastQualityGatePassed ? "passed" : "failed"}\n`;
-            }
-            if (knowledgeSummary.lastQualityGateReasons && knowledgeSummary.lastQualityGateReasons.length > 0) {
-                output += `- quality reasons: ${knowledgeSummary.lastQualityGateReasons.join("; ")}\n`;
-            }
-            if (knowledgeSummary.lastChangeStat) {
-                output +=
-                    `- last change stats (NEW/CONFIRM/REVISE/BRIDGE): ` +
-                        `${knowledgeSummary.lastChangeStat.newCount}/${knowledgeSummary.lastChangeStat.confirmCount}/` +
-                        `${knowledgeSummary.lastChangeStat.reviseCount}/${knowledgeSummary.lastChangeStat.bridgeCount}\n`;
-            }
             output += `- last run: ${knowledgeSummary.lastRunAtMs ? new Date(knowledgeSummary.lastRunAtMs).toISOString() : "(none)"}\n\n`;
         }
     }

package/dist/src/commands.js.map

@@ -1 +1 @@
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package/dist/src/hooks/cron-skill-inject.d.ts

@@ -3,19 +3,18 @@
  *
  * When a cron job fires with a heartbeat message starting with `/skill-name`,
  * this hook reads the matching SKILL.md from the agent's workspace and
- * prepends its body to the message, so the agent receives full workflow
+ * prepends its body via prependContext, so the agent receives full workflow
  * instructions in the isolated cron session.
  */
 export declare function createCronSkillInjectionHook(): (event: {
-    payload?: {
-        message?: string;
-    };
+    prompt?: string;
+    messages?: unknown[];
     [key: string]: unknown;
 }, ctx: {
-    sessionType?: string;
-    agentWorkspace?: string;
+    trigger?: string;
+    workspaceDir?: string;
     [key: string]: unknown;
 }) => Promise<{
-    payload: Record<string, unknown>;
+    prependContext: string;
 } | void>;
 //# sourceMappingURL=cron-skill-inject.d.ts.map

package/dist/src/hooks/cron-skill-inject.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"cron-skill-inject.d.ts","sourceRoot":"","sources":["../../../src/hooks/cron-skill-inject.ts"],"names":[],"mappings":"AAGA;;;;;;;GAOG;AACH,wBAAgB,4BAA4B,KAExC,OAAO;IAAE,OAAO,CAAC,EAAE;QAAE,OAAO,CAAC,EAAE,MAAM,CAAA;KAAE,CAAC;IAAC,CAAC,GAAG,EAAE,MAAM,GAAG,OAAO,CAAA;CAAE,EACjE,KAAK;IAAE,WAAW,CAAC,EAAE,MAAM,CAAC;IAAC,cAAc,CAAC,EAAE,MAAM,CAAC;IAAC,CAAC,GAAG,EAAE,MAAM,GAAG,OAAO,CAAA;CAAE,KAC7E,OAAO,CAAC;IAAE,OAAO,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,CAAA;CAAE,GAAG,IAAI,CAAC,CA2CxD"}
+{"version":3,"file":"cron-skill-inject.d.ts","sourceRoot":"","sources":["../../../src/hooks/cron-skill-inject.ts"],"names":[],"mappings":"AAGA;;;;;;;GAOG;AACH,wBAAgB,4BAA4B,KAExC,OAAO;IAAE,MAAM,CAAC,EAAE,MAAM,CAAC;IAAC,QAAQ,CAAC,EAAE,OAAO,EAAE,CAAC;IAAC,CAAC,GAAG,EAAE,MAAM,GAAG,OAAO,CAAA;CAAE,EACxE,KAAK;IAAE,OAAO,CAAC,EAAE,MAAM,CAAC;IAAC,YAAY,CAAC,EAAE,MAAM,CAAC;IAAC,CAAC,GAAG,EAAE,MAAM,GAAG,OAAO,CAAA;CAAE,KACvE,OAAO,CAAC;IAAE,cAAc,EAAE,MAAM,CAAA;CAAE,GAAG,IAAI,CAAC,CAgC9C"}

package/dist/src/hooks/cron-skill-inject.js

@@ -5,16 +5,16 @@ import path from "node:path";
  *
  * When a cron job fires with a heartbeat message starting with `/skill-name`,
  * this hook reads the matching SKILL.md from the agent's workspace and
- * prepends its body to the message, so the agent receives full workflow
+ * prepends its body via prependContext, so the agent receives full workflow
  * instructions in the isolated cron session.
  */
 export function createCronSkillInjectionHook() {
     return async (event, ctx) => {
         // Only process cron sessions
-        if (ctx.sessionType !== "cron")
+        if (ctx.trigger !== "cron")
             return;
-        const message = event.payload?.message;
-        if (typeof message !== "string")
+        const message = typeof event.prompt === "string" ? event.prompt : "";
+        if (!message)
             return;
         // Extract /skill-name from the first line
         const match = message.match(/^\/([a-z][\w-]*)/);
@@ -22,7 +22,7 @@ export function createCronSkillInjectionHook() {
             return;
         const skillName = match[1];
         // Resolve agent workspace
-        const workspace = ctx.agentWorkspace;
+        const workspace = ctx.workspaceDir;
         if (typeof workspace !== "string")
             return;
         const skillPath = path.join(workspace, "skills", skillName, "SKILL.md");
@@ -38,16 +38,7 @@ export function createCronSkillInjectionHook() {
         const body = content.replace(/^---[\s\S]*?---\s*/, "").trim();
         if (!body)
             return;
-        // Inject skill body after the first line (/skill-name), before the rest
-        const firstNewline = message.indexOf("\n");
-        const newMessage = firstNewline === -1
-            ? message + "\n\n" + body
-            : message.slice(0, firstNewline) +
-                "\n\n" +
-                body +
-                "\n\n" +
-                message.slice(firstNewline + 1);
-        return { payload: { ...event.payload, message: newMessage } };
+        return { prependContext: body };
     };
 }
 //# sourceMappingURL=cron-skill-inject.js.map

package/dist/src/hooks/cron-skill-inject.js.map

@@ -1 +1 @@
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package/dist/src/hooks/research-mode.d.ts

@@ -17,6 +17,6 @@ type HookResult = {
 /**
  * Injects on every prompt build (survives compaction).
  */
-export declare function createResearchModeHook(): (_event: HookEvent, context: HookContext) => HookResult;
+export declare function createResearchModeHook(): (_event: HookEvent, _context: HookContext) => HookResult;
 export {};
 //# sourceMappingURL=research-mode.d.ts.map

package/dist/src/hooks/research-mode.d.ts.map

@@ -1 +1 @@
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package/dist/src/hooks/research-mode.js

@@ -2,82 +2,34 @@
  * Research mode prompt injected into every conversation.
  */
 const RESEARCH_MODE_PROMPT = `[Scientify]
-You are running the Continuous Research Engine.
-Use skills/tools only when they are actually needed, and keep one unified persistence path:
-  ~/.openclaw/workspace/projects/<project-id>/knowledge_state/
-Project discovery order:
-  1) explicit project_id/--project
-  2) ~/.openclaw/workspace/projects/.active
-  3) auto-create project id (do not silently switch .active)
-
-Unified research cycle semantics:
-  prepare -> collect/filter -> reflect -> record -> status
-Never treat a research cycle as complete without a successful \`scientify_literature_state.record\`.
-\`no_deliver\` disables delivery only; it does not disable record/persistence.
-Always propagate one unique run_id per cycle (events/state/push-log must match).
-
-Scheduling:
-  - For delayed/recurring tasks use \`scientify_cron_job\`.
-  - Plain reminder: use \`message\` path (no research pipeline).
-  - Research topic task: use \`topic\` path and persist knowledge_state.
-  - Avoid recursive cron creation from cron runs.
-  - If user asks "create/start a research task and run now, then return raw status JSON",
-    call \`scientify_cron_job\` with \`action=upsert\` + \`run_now=true\` and return \`status_json\` from tool output.
-    Do not emulate this with hand-written JSON.
-
-Execution truth:
-  - Do not claim background progress unless you created a real async handle (job_id/task_id).
-  - Without a real async handle, execute synchronously in this turn and return status.
-  - If not executed, say not executed. Never imply hidden progress.
-
-Run profile defaults:
-  - Default profile: strict (full-text-first).
-  - Switch to fast/metadata-only only when user explicitly asks to skip full-text reading.
-  - Soft gate is default: non-fatal quality issues are warnings, not blockers.
-  - Never skip persistence due quality limits; persist every run.
-  - User-facing responses should be concise Markdown. Keep tool-call JSON minimal and only for persistence.
-  - Use degraded_quality only for fatal gate conditions.
-
-Research quality and gating:
-  - Full-text-first for core evidence papers.
-  - If full text unavailable: set full_text_read=false and unread_reason.
-  - In core paper notes, avoid placeholders ("N/A", "not provided", "unknown"); either provide concrete content or omit field.
-  - Evidence binding for key conclusions should include section + locator + quote.
-  - BRIDGE requires resolvable evidence_ids and at least one full-text-backed evidence source.
-  - If BRIDGE, NEW+REVISE, or unread core backlog appears, execute one reflection follow-up query and persist trace/result.
-  - Hypotheses are accepted only when evidence_ids and dependency_path are sufficient; otherwise reject via hypothesis_gate reasons.
-  - Before user-facing wording, check latest status.hypothesis_gate.accepted:
-    * accepted == 0: factual report only; do not output speculative "next high-value routes"/"deep dive" guidance.
-    * accepted > 0: include hypothesis details in current message by default (stable path).
-    * only when runtime/channel clearly supports multi-send, split into two consecutive messages (alert then detailed hypothesis).
-  - If hard user constraints are not met (for example min core papers), do not report status=ok.
-
-Traceability:
-  - Reuse prepare-returned scope/topic in record/status. Never replace scope with project_id.
-  - On follow-up ("which papers?", "why this hypothesis?"), answer from persisted status/knowledge_state first.
-  - Only re-search when persistence lacks required facts, and state this explicitly.
-
-Rigor:
-  - Never fabricate citations, quotes, venues, or results.
-  - Say "I don't know" when uncertain.
-  - Use \`python3\` (not \`python\`) for shell commands in this environment.`;
-const CRON_CONTEXT_GUARD = `
-[Scientify Cron Context]
-This turn is already running inside a cron-triggered execution.
-Do not call scientify_cron_job (or create another cron job) from this run.
-Do not recursively schedule run_now from within cron.
-Use the existing execution handle and complete prepare -> record -> status directly.
-If workload is too heavy for this turn, prefer sessions_spawn task delegation (with task id) instead of nested cron.`;
+Skills: match research tasks to <available_skills>; read SKILL.md before acting.
+Workspace: $W/projects/<topic>/. Check /research-status before writing. Active project in $W/projects/.active.
+  survey/ — search_terms.json, raw_results.json, filtered_papers.json, clusters.json, report.md (literature-survey)
+  papers/ — organized by cluster direction, each with paper_list.md + {arxiv_id}/ .tex sources (literature-survey)
+  notes/ — per-paper deep analysis paper_{id}.md (research-survey). survey_res.md = method comparison table.
+  ideas/ — gaps.md, idea_1..5.md, selected_idea.md, summary.md (idea-generation)
+  review/ — reading_plan.md, notes/{id}.md, comparison.md, taxonomy.md, draft.md, bibliography.bib (write-review-paper)
+  plan_res.md (research-plan) → project/ + ml_res.md (research-implement) → iterations/judge_v*.md (research-review) → experiment_res.md (research-experiment)
+Scheduling: if user asks for recurring or delayed push delivery (e.g. tomorrow at 08:00, daily digest), use research-subscription skill and call scientify_cron_job to create a real schedule.
+If it is a plain reminder (not research), set scientify_cron_job.message and do not default to the literature pipeline.
+For recurring research pushes, use scientify_literature_state to prepare dedupe context and record both pushed paper IDs and structured knowledge_state (changes, updates, hypotheses, run_log).
+Full-text-first policy: for papers used as core evidence, read full text when possible and mark full_text_read=true; if not fully read, you must explicitly mark full_text_read=false with unread_reason.
+Structured paper record policy: for each core paper, populate domain/subdomains/cross-domain links/research goal/approach/methodology design/key contributions/practical insights/must-understand points/limitations/evidence anchors.
+Use temporary local directory for full-text files (e.g. /tmp/scientify-fulltext/<run-id>) and delete it after record; write cleanup status to run_log.temp_cleanup_status.
+Quality targets for research runs: core full-text coverage >=80%; evidence-binding rate >=90% (key conclusions must bind to section+locator+quote); citation error rate <2%. If full text is missing, do not keep high-confidence conclusions.
+For research records, include project_id when available so state can persist under project knowledge_state/.
+When user gives preference feedback (e.g. "more like this", "skip this direction", "prefer arxiv"), quietly persist it via scientify_literature_state action=feedback when scope/topic are inferable.
+Preference memory is backend-only: use it to rerank future pushes, do not expose memory internals unless user explicitly asks.
+Do not stop at explanation when user explicitly asks to set a schedule.
+Rules: file exists = step done (skip). Outputs immutable unless user asks. project/ mutable during review loop.
+Execution: always use \`python3\` (not \`python\`) for shell commands in this environment.
+Rigor: read first, think second, answer third. Never fabricate references or results. Every claim needs a source. Say "I don't know" when uncertain. Read actual papers, not just abstracts. Ground ideas in real papers.`;
 /**
  * Injects on every prompt build (survives compaction).
  */
 export function createResearchModeHook() {
-    return (_event, context) => {
-        const sessionKey = typeof context.sessionKey === "string" ? context.sessionKey : "";
-        const inCronContext = sessionKey.includes(":cron:");
-        return {
-            prependContext: inCronContext ? `${RESEARCH_MODE_PROMPT}\n${CRON_CONTEXT_GUARD}` : RESEARCH_MODE_PROMPT,
-        };
+    return (_event, _context) => {
+        return { prependContext: RESEARCH_MODE_PROMPT };
     };
 }
 //# sourceMappingURL=research-mode.js.map

package/dist/src/hooks/research-mode.js.map

@@ -1 +1 @@
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package/dist/src/hooks/scientify-signature.d.ts

@@ -1,4 +1,4 @@
-type BaseHookContext = {
+type BaseHookContext = Record<string, unknown> & {
     sessionKey?: string;
     agentId?: string;
 };