scientify 1.13.5 → 2.0.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (100) hide show
  1. package/README.en.md +350 -0
  2. package/README.md +148 -358
  3. package/dist/index.d.ts +8 -2
  4. package/dist/index.d.ts.map +1 -1
  5. package/dist/index.js +131 -122
  6. package/dist/index.js.map +1 -1
  7. package/dist/src/cli/research.d.ts +1 -6
  8. package/dist/src/cli/research.d.ts.map +1 -1
  9. package/dist/src/cli/research.js +227 -123
  10. package/dist/src/cli/research.js.map +1 -1
  11. package/dist/src/commands/metabolism-status.d.ts +3 -3
  12. package/dist/src/commands/metabolism-status.d.ts.map +1 -1
  13. package/dist/src/commands/metabolism-status.js +72 -75
  14. package/dist/src/commands/metabolism-status.js.map +1 -1
  15. package/dist/src/commands.d.ts +1 -1
  16. package/dist/src/commands.d.ts.map +1 -1
  17. package/dist/src/commands.js +0 -55
  18. package/dist/src/commands.js.map +1 -1
  19. package/dist/src/hooks/cron-skill-inject.d.ts +6 -7
  20. package/dist/src/hooks/cron-skill-inject.d.ts.map +1 -1
  21. package/dist/src/hooks/cron-skill-inject.js +6 -15
  22. package/dist/src/hooks/cron-skill-inject.js.map +1 -1
  23. package/dist/src/hooks/research-mode.d.ts +1 -1
  24. package/dist/src/hooks/research-mode.d.ts.map +1 -1
  25. package/dist/src/hooks/research-mode.js +24 -72
  26. package/dist/src/hooks/research-mode.js.map +1 -1
  27. package/dist/src/hooks/scientify-signature.d.ts +1 -1
  28. package/dist/src/hooks/scientify-signature.d.ts.map +1 -1
  29. package/dist/src/hooks/scientify-signature.js +2 -5
  30. package/dist/src/hooks/scientify-signature.js.map +1 -1
  31. package/dist/src/knowledge-state/render.d.ts +1 -9
  32. package/dist/src/knowledge-state/render.d.ts.map +1 -1
  33. package/dist/src/knowledge-state/render.js +33 -158
  34. package/dist/src/knowledge-state/render.js.map +1 -1
  35. package/dist/src/knowledge-state/store.d.ts.map +1 -1
  36. package/dist/src/knowledge-state/store.js +65 -884
  37. package/dist/src/knowledge-state/store.js.map +1 -1
  38. package/dist/src/knowledge-state/types.d.ts +0 -69
  39. package/dist/src/knowledge-state/types.d.ts.map +1 -1
  40. package/dist/src/literature/subscription-state.d.ts +0 -2
  41. package/dist/src/literature/subscription-state.d.ts.map +1 -1
  42. package/dist/src/literature/subscription-state.js +7 -1199
  43. package/dist/src/literature/subscription-state.js.map +1 -1
  44. package/dist/src/research-subscriptions/constants.d.ts +1 -1
  45. package/dist/src/research-subscriptions/constants.js +1 -1
  46. package/dist/src/research-subscriptions/cron-client.d.ts +1 -1
  47. package/dist/src/research-subscriptions/cron-client.d.ts.map +1 -1
  48. package/dist/src/research-subscriptions/delivery.d.ts +1 -1
  49. package/dist/src/research-subscriptions/delivery.d.ts.map +1 -1
  50. package/dist/src/research-subscriptions/handlers.d.ts +1 -1
  51. package/dist/src/research-subscriptions/handlers.d.ts.map +1 -1
  52. package/dist/src/research-subscriptions/handlers.js +9 -9
  53. package/dist/src/research-subscriptions/handlers.js.map +1 -1
  54. package/dist/src/research-subscriptions/parse.d.ts.map +1 -1
  55. package/dist/src/research-subscriptions/parse.js +0 -10
  56. package/dist/src/research-subscriptions/parse.js.map +1 -1
  57. package/dist/src/research-subscriptions/prompt.d.ts +1 -1
  58. package/dist/src/research-subscriptions/prompt.d.ts.map +1 -1
  59. package/dist/src/research-subscriptions/prompt.js +196 -191
  60. package/dist/src/research-subscriptions/prompt.js.map +1 -1
  61. package/dist/src/research-subscriptions/types.d.ts +1 -2
  62. package/dist/src/research-subscriptions/types.d.ts.map +1 -1
  63. package/dist/src/templates/bootstrap.d.ts.map +1 -1
  64. package/dist/src/templates/bootstrap.js +32 -19
  65. package/dist/src/templates/bootstrap.js.map +1 -1
  66. package/dist/src/tools/arxiv-download.d.ts +1 -2
  67. package/dist/src/tools/arxiv-download.d.ts.map +1 -1
  68. package/dist/src/tools/arxiv-search.d.ts +1 -2
  69. package/dist/src/tools/arxiv-search.d.ts.map +1 -1
  70. package/dist/src/tools/github-search-tool.d.ts +1 -2
  71. package/dist/src/tools/github-search-tool.d.ts.map +1 -1
  72. package/dist/src/tools/openalex-search.d.ts +1 -2
  73. package/dist/src/tools/openalex-search.d.ts.map +1 -1
  74. package/dist/src/tools/openreview-lookup.d.ts +1 -2
  75. package/dist/src/tools/openreview-lookup.d.ts.map +1 -1
  76. package/dist/src/tools/paper-browser.d.ts +1 -2
  77. package/dist/src/tools/paper-browser.d.ts.map +1 -1
  78. package/dist/src/tools/result.d.ts +3 -5
  79. package/dist/src/tools/result.d.ts.map +1 -1
  80. package/dist/src/tools/result.js +5 -7
  81. package/dist/src/tools/result.js.map +1 -1
  82. package/dist/src/tools/scientify-cron.d.ts +4 -9
  83. package/dist/src/tools/scientify-cron.d.ts.map +1 -1
  84. package/dist/src/tools/scientify-cron.js +19 -441
  85. package/dist/src/tools/scientify-cron.js.map +1 -1
  86. package/dist/src/tools/scientify-literature-state.d.ts +1 -62
  87. package/dist/src/tools/scientify-literature-state.d.ts.map +1 -1
  88. package/dist/src/tools/scientify-literature-state.js +46 -312
  89. package/dist/src/tools/scientify-literature-state.js.map +1 -1
  90. package/dist/src/tools/unpaywall-download.d.ts +1 -2
  91. package/dist/src/tools/unpaywall-download.d.ts.map +1 -1
  92. package/dist/src/types.d.ts +16 -0
  93. package/dist/src/types.d.ts.map +1 -0
  94. package/dist/src/types.js +2 -0
  95. package/dist/src/types.js.map +1 -0
  96. package/openclaw.plugin.json +4 -2
  97. package/package.json +1 -1
  98. package/skills/metabolism/SKILL.md +2 -0
  99. package/skills/research-subscription/SKILL.md +1 -29
  100. package/README.zh.md +0 -494
package/dist/src/tools/scientify-literature-state.d.ts CHANGED
@@ -17,9 +17,6 @@ export declare const ScientifyLiteratureStateToolSchema: import("@sinclair/typeb
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  }>>>;
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  status: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
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  run_id: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
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- run_profile: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
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- required_core_papers: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
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- required_full_text_coverage_pct: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
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  note: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
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  signal: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
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  paper: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TObject<{
@@ -123,14 +120,6 @@ export declare const ScientifyLiteratureStateToolSchema: import("@sinclair/typeb
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  statement: import("@sinclair/typebox").TString;
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  trigger: import("@sinclair/typebox").TString;
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  dependency_path: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
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- strengths: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
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- weaknesses: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
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- plan_steps: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
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- strict_evaluation: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TObject<{
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- overall_score: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
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- decision: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
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- reason: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
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- }>>;
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  novelty: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
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  feasibility: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
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  impact: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
@@ -141,35 +130,16 @@ export declare const ScientifyLiteratureStateToolSchema: import("@sinclair/typeb
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  }>>>;
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  run_log: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TObject<{
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  model: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
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- run_profile: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
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  duration_ms: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
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  error: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
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  degraded: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TBoolean>;
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  notes: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
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- required_core_papers: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
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- required_full_text_coverage_pct: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
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  temp_full_text_dir: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
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  temp_files_downloaded: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
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  temp_cleanup_status: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
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  temp_cleanup_note: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
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  full_text_attempted: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
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  full_text_completed: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
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- recall_tier_stats: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TObject<{
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- tier_a: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TObject<{
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- candidates: import("@sinclair/typebox").TNumber;
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- selected: import("@sinclair/typebox").TNumber;
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- }>>;
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- tier_b: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TObject<{
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- candidates: import("@sinclair/typebox").TNumber;
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- selected: import("@sinclair/typebox").TNumber;
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- }>>;
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- tier_c: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TObject<{
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- candidates: import("@sinclair/typebox").TNumber;
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- selected: import("@sinclair/typebox").TNumber;
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- }>>;
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- }>>;
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- reflection_step_executed: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TBoolean>;
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- reflection_step_result_count: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
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  }>>;
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  }>>;
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  }>;
@@ -196,9 +166,6 @@ export declare function createScientifyLiteratureStateTool(): {
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  }>>>;
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  status: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
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  run_id: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
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- run_profile: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
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- required_core_papers: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
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- required_full_text_coverage_pct: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
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  note: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
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  signal: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
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  paper: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TObject<{
@@ -302,14 +269,6 @@ export declare function createScientifyLiteratureStateTool(): {
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  statement: import("@sinclair/typebox").TString;
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  trigger: import("@sinclair/typebox").TString;
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  dependency_path: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
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- strengths: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
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- weaknesses: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
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- plan_steps: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
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- strict_evaluation: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TObject<{
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- overall_score: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
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- decision: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
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- reason: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
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- }>>;
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  novelty: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
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  feasibility: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
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  impact: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
@@ -320,45 +279,25 @@ export declare function createScientifyLiteratureStateTool(): {
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  }>>>;
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  run_log: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TObject<{
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  model: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
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- run_profile: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
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  duration_ms: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
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  error: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
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  degraded: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TBoolean>;
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  notes: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
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- required_core_papers: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
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- required_full_text_coverage_pct: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
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  temp_full_text_dir: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
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  temp_files_downloaded: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
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  temp_cleanup_status: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
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  temp_cleanup_note: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
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  full_text_attempted: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
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  full_text_completed: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
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- recall_tier_stats: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TObject<{
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- tier_a: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TObject<{
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- candidates: import("@sinclair/typebox").TNumber;
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- selected: import("@sinclair/typebox").TNumber;
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- }>>;
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- tier_b: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TObject<{
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- candidates: import("@sinclair/typebox").TNumber;
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- selected: import("@sinclair/typebox").TNumber;
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- }>>;
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- tier_c: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TObject<{
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- candidates: import("@sinclair/typebox").TNumber;
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- selected: import("@sinclair/typebox").TNumber;
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- }>>;
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- }>>;
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- reflection_step_executed: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TBoolean>;
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- reflection_step_result_count: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
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  }>>;
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  }>>;
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  }>;
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  execute: (_toolCallId: string, rawArgs: unknown) => Promise<{
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- type: "tool_result";
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  content: {
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  type: "text";
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  text: string;
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  }[];
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- isError?: boolean;
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+ details: unknown;
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  }>;
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  };
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  //# sourceMappingURL=scientify-literature-state.d.ts.map
package/dist/src/tools/scientify-literature-state.d.ts.map CHANGED
@@ -1 +1 @@
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+ {"version":3,"file":"scientify-literature-state.d.ts","sourceRoot":"","sources":["../../../src/tools/scientify-literature-state.ts"],"names":[],"mappings":"AAkLA,eAAO,MAAM,kCAAkC;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;EA8D7C,CAAC;AAqpBH,wBAAgB,kCAAkC;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;2BAOjB,MAAM,WAAW,OAAO;;;;;;;EA2PxD"}