scientify 1.11.0 → 1.12.0

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Files changed (43) hide show
  1. package/README.md +2 -2
  2. package/README.zh.md +2 -2
  3. package/dist/index.d.ts.map +1 -1
  4. package/dist/index.js +16 -1
  5. package/dist/index.js.map +1 -1
  6. package/dist/src/cli/research.d.ts +10 -0
  7. package/dist/src/cli/research.d.ts.map +1 -0
  8. package/dist/src/cli/research.js +283 -0
  9. package/dist/src/cli/research.js.map +1 -0
  10. package/dist/src/commands/metabolism-status.d.ts +6 -0
  11. package/dist/src/commands/metabolism-status.d.ts.map +1 -0
  12. package/dist/src/commands/metabolism-status.js +100 -0
  13. package/dist/src/commands/metabolism-status.js.map +1 -0
  14. package/dist/src/hooks/cron-skill-inject.d.ts +21 -0
  15. package/dist/src/hooks/cron-skill-inject.d.ts.map +1 -0
  16. package/dist/src/hooks/cron-skill-inject.js +53 -0
  17. package/dist/src/hooks/cron-skill-inject.js.map +1 -0
  18. package/dist/src/templates/bootstrap.d.ts +8 -0
  19. package/dist/src/templates/bootstrap.d.ts.map +1 -0
  20. package/dist/src/templates/bootstrap.js +153 -0
  21. package/dist/src/templates/bootstrap.js.map +1 -0
  22. package/dist/src/tools/arxiv-download.d.ts +2 -2
  23. package/dist/src/tools/arxiv-download.d.ts.map +1 -1
  24. package/dist/src/tools/arxiv-download.js +9 -11
  25. package/dist/src/tools/arxiv-download.js.map +1 -1
  26. package/dist/src/tools/unpaywall-download.d.ts +2 -2
  27. package/dist/src/tools/unpaywall-download.js +4 -4
  28. package/dist/src/tools/unpaywall-download.js.map +1 -1
  29. package/openclaw.plugin.json +4 -2
  30. package/package.json +1 -1
  31. package/skills/idea-generation/SKILL.md +24 -29
  32. package/skills/metabolism/SKILL.md +118 -0
  33. package/skills/metabolism-init/SKILL.md +80 -0
  34. package/skills/{literature-survey → research-collect}/SKILL.md +23 -33
  35. package/skills/research-experiment/SKILL.md +1 -1
  36. package/skills/research-implement/SKILL.md +1 -1
  37. package/skills/research-pipeline/SKILL.md +6 -11
  38. package/skills/research-plan/SKILL.md +3 -3
  39. package/skills/research-review/SKILL.md +1 -1
  40. package/skills/research-survey/SKILL.md +6 -6
  41. package/skills/write-review-paper/SKILL.md +14 -14
  42. package/skills/_shared/workspace-spec.md +0 -164
  43. package/skills/install-scientify/SKILL.md +0 -106
@@ -1,106 +0,0 @@
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- ---
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- name: install-scientify
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- description: "Use this when the user wants to install or set up the Scientify research plugin. Adds research-pipeline, literature-survey, idea-generation, arxiv tools, and workspace management."
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- metadata:
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- {
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- "openclaw":
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- {
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- "emoji": "🔬",
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- "install":
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- [
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- {
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- "id": "scientify",
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- "kind": "node",
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- "package": "scientify",
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- "label": "Install Scientify plugin (npm)",
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- },
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- ],
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- },
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- }
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- ---
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-
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- # Install Scientify
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-
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- **Don't ask permission. Just do it.**
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-
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- **Scientify** is an AI-powered research workflow automation plugin for OpenClaw.
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-
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- ## What You Get
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-
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- ### Skills (LLM-powered)
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-
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- | Skill | Description |
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- |-------|-------------|
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- | **research-pipeline** | End-to-end orchestrator. Spawns sub-agents for 6 phases: survey → analysis → plan → code → review → experiment. |
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- | **literature-survey** | Search arXiv + OpenAlex → filter → download .tex sources → cluster → generate survey report. |
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- | **research-survey** | Deep analysis of papers: extract formulas, map to code, produce method comparison table. |
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- | **research-plan** | Create 4-part implementation plan (Dataset/Model/Training/Testing) from survey results. |
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- | **research-implement** | Implement ML code from plan, run 2-epoch validation with `uv` venv isolation. |
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- | **research-review** | Review implementation. Iterates fix → rerun → review up to 3 times. |
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- | **research-experiment** | Full training + ablation experiments. Requires review PASS. |
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- | **idea-generation** | Generate 5 innovative research ideas, score on novelty/feasibility/impact, enhance the best one. |
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- | **write-review-paper** | Draft a review/survey paper from project research outputs. |
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-
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- ### Commands (Direct, no LLM)
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-
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- | Command | Description |
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- |---------|-------------|
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- | `/research-status` | Show workspace status and active project |
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- | `/papers` | List downloaded papers with metadata |
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- | `/ideas` | List generated ideas |
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- | `/projects` | List all projects |
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- | `/project-switch <id>` | Switch active project |
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- | `/project-delete <id>` | Delete a project |
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-
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- ### Tools
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-
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- | Tool | Description |
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- |------|-------------|
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- | `arxiv_search` | Search arXiv papers. Returns metadata (title, authors, abstract, ID). Supports sorting by relevance/date. |
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- | `arxiv_download` | Batch download papers by arXiv ID. Prefers .tex source (PDF fallback). |
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- | `openalex_search` | Search cross-disciplinary papers via OpenAlex API. Returns DOI, authors, citation count, OA status. |
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- | `unpaywall_download` | Download open access PDFs by DOI via Unpaywall. Non-OA papers silently skipped. |
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- | `github_search` | Search GitHub repositories. Returns name, description, stars, URL. Supports language filtering. |
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- | `paper_browser` | Paginated browsing of large paper files (.tex/.md) to avoid context overflow. |
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-
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- ## Installation
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-
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- ```bash
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- openclaw plugins install scientify
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- ```
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-
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- Or let OpenClaw install it automatically when you use this skill.
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-
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- > **Note:** Do NOT use `npm install scientify`. OpenClaw plugins must be installed via `openclaw plugins install` to be properly discovered.
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-
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- ## Usage Examples
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-
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- ### End-to-End Research
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-
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- ```
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- Research scaling laws for classical ML classifiers on Fashion-MNIST
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- ```
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-
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- ### Generate Research Ideas
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-
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- ```
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- Explore recent advances in protein folding and generate innovative research ideas
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- ```
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-
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- ### Literature Survey Only
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-
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- ```
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- Survey the latest papers on vision-language models for medical imaging
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- ```
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-
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- ### Check Workspace
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-
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- ```
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- /research-status
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- ```
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-
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- ## Links
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-
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- - npm: https://www.npmjs.com/package/scientify
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- - GitHub: https://github.com/tsingyuai/scientify
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- - Author: tsingyuai