react-mutation-mapper 0.8.59 → 0.8.61

package/dist/component/oncokb/oncokbCard/BiologicalContent.d.ts

@@ -1,8 +0,0 @@
-import React from 'react';
-import { Citations } from 'oncokb-ts-api-client';
-import { ICache } from '../../../model/SimpleCache';
-export declare const BiologicalContent: React.FunctionComponent<{
-    biologicalSummary: string;
-    mutationEffectCitations: Citations;
-    pmidData: ICache;
-}>;

package/dist/component/oncokb/oncokbCard/EvidenceReferenceContent.d.ts

@@ -1,9 +0,0 @@
-import React from 'react';
-import { Citations } from 'oncokb-ts-api-client';
-import { ICache } from '../../../model/SimpleCache';
-export declare const EvidenceReferenceContent: React.FunctionComponent<{
-    description?: string;
-    citations?: Citations;
-    noInfoDisclaimer?: string;
-    pmidData?: ICache;
-}>;

package/dist/component/oncokb/oncokbCard/ImplicationContent.d.ts

@@ -1,11 +0,0 @@
-import { Implication } from 'oncokb-ts-api-client';
-import * as React from 'react';
-import { ICache } from '../../../model/SimpleCache';
-declare type ImplicationContentProps = {
-    variant: string;
-    summary: string;
-    implications: Implication[];
-    pmidData: ICache;
-};
-export declare const ImplicationContent: React.FunctionComponent<ImplicationContentProps>;
-export {};

package/dist/util/OncoKbUtils.d.ts

@@ -1,40 +0,0 @@
-import { IOncoKbData, Mutation, OncoKbCardDataType } from 'cbioportal-utils';
-import { IndicatorQueryResp, TumorType } from 'oncokb-ts-api-client';
-export declare function normalizeLevel(level: string | null): string | null;
-export declare function normalizeOncogenicity(oncogenicity?: string): string;
-export declare function oncogenicXPosition(highestSensitiveLevel: string | null): number;
-export declare function oncogenicYPosition(oncogenicity: string, isVUS: boolean, resistanceLevel: string | null): number;
-export declare function levelIconClassNames(level: string): string;
-export declare function oncogenicityIconClassNames(oncogenicity: string): string;
-export declare function annotationIconClassNames(type: OncoKbCardDataType, highestLevel: string, indicator?: IndicatorQueryResp): string;
-export declare function calcHighestIndicatorLevel(type: OncoKbCardDataType, indicator?: IndicatorQueryResp): string;
-export declare function calcOncogenicScore(oncogenic: string): number;
-export declare function calcSensitivityLevelScore(level: string): number;
-export declare function calcResistanceLevelScore(level: string): number;
-export declare function calcDiagnosticLevelScore(level: string): number;
-export declare function calcPrognosticLevelScore(level: string): number;
-export declare function generateOncogenicCitations(oncogenicRefs: any): number[];
-export declare function levelComparator(a: string, b: string): 1 | -1;
-/**
- * Return combined alterations name, separated by comma.
- * Same location variant will be truncated into AALocationAllele e.g. V600E/K
- *
- * @param {Array} alterations - List of alterations
- * @return {string} - Truncated alteration name
- */
-export declare function mergeAlterations(alterations: string | string[]): string;
-/**
- * Return the positional variant of the missense mutation
- * @param alteration The missense mutation
- */
-export declare function getPositionalVariant(alteration: string): string | undefined;
-export declare function getTumorTypeName(tumorType?: TumorType): string;
-export declare function getTumorTypeNameWithExclusionInfo(tumorType?: TumorType, excludedTumorTypes?: TumorType[]): string;
-export declare function groupOncoKbIndicatorDataByMutations(mutationsByPosition: {
-    [pos: number]: Mutation[];
-}, oncoKbData: IOncoKbData, getTumorType: (mutation: Mutation) => string, getEntrezGeneId: (mutation: Mutation) => number, filter?: (indicator: IndicatorQueryResp) => boolean): {
-    [pos: number]: IndicatorQueryResp[];
-};
-export declare function getIndicatorData(mutation: Mutation, oncoKbData: IOncoKbData, getTumorType: (mutation: Mutation) => string, getEntrezGeneId: (mutation: Mutation) => number): IndicatorQueryResp | undefined;
-export declare function defaultOncoKbIndicatorFilter(indicator: IndicatorQueryResp): boolean;
-export declare function defaultOncoKbFilter(mutation: Mutation, oncoKbData?: IOncoKbData, getTumorType?: (mutation: Mutation) => string, getEntrezGeneId?: (mutation: Mutation) => number): boolean;

package/dist/util/OncoKbUtils.spec.d.ts

@@ -1 +0,0 @@
-export {};