react-msaview 5.9.0 → 6.0.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/bundle/index.js +99 -99
- package/bundle/index.js.map +4 -4
- package/dist/clustalX.js +22 -22
- package/dist/clustalX.js.map +1 -1
- package/dist/components/ConservationTrack.js +21 -16
- package/dist/components/ConservationTrack.js.map +1 -1
- package/dist/components/CopyButton.d.ts +9 -0
- package/dist/components/CopyButton.js +23 -0
- package/dist/components/CopyButton.js.map +1 -0
- package/dist/components/Loading.js +2 -2
- package/dist/components/Loading.js.map +1 -1
- package/dist/components/MSAView.js +18 -24
- package/dist/components/MSAView.js.map +1 -1
- package/dist/components/ResizeHandles.js +24 -40
- package/dist/components/ResizeHandles.js.map +1 -1
- package/dist/components/ScrollbarThumb.d.ts +14 -0
- package/dist/components/ScrollbarThumb.js +28 -0
- package/dist/components/ScrollbarThumb.js.map +1 -0
- package/dist/components/SequenceTextArea.js +3 -10
- package/dist/components/SequenceTextArea.js.map +1 -1
- package/dist/components/TextTrack.js +26 -21
- package/dist/components/TextTrack.js.map +1 -1
- package/dist/components/VerticalScrollbar.js +11 -25
- package/dist/components/VerticalScrollbar.js.map +1 -1
- package/dist/components/dialogs/FeatureDialog.js +3 -3
- package/dist/components/dialogs/FeatureDialog.js.map +1 -1
- package/dist/components/dialogs/{UserProvidedDomainsDialog.d.ts → InterProScanFileDialog.d.ts} +2 -2
- package/dist/components/dialogs/{UserProvidedDomainsDialog.js → InterProScanFileDialog.js} +6 -10
- package/dist/components/dialogs/InterProScanFileDialog.js.map +1 -0
- package/dist/components/dialogs/TrackInfoDialog.d.ts +2 -4
- package/dist/components/dialogs/TrackInfoDialog.js +8 -14
- package/dist/components/dialogs/TrackInfoDialog.js.map +1 -1
- package/dist/components/header/FileMenu.js +3 -3
- package/dist/components/header/FileMenu.js.map +1 -1
- package/dist/components/header/GappynessSlider.js +1 -1
- package/dist/components/header/GappynessSlider.js.map +1 -1
- package/dist/components/header/{getDomainsMenu.d.ts → getAnnotationsMenu.d.ts} +1 -1
- package/dist/components/header/{getDomainsMenu.js → getAnnotationsMenu.js} +10 -9
- package/dist/components/header/getAnnotationsMenu.js.map +1 -0
- package/dist/components/header/settingsMenuItems.js +39 -72
- package/dist/components/header/settingsMenuItems.js.map +1 -1
- package/dist/components/import/ImportForm.js +1 -1
- package/dist/components/import/ImportForm.js.map +1 -1
- package/dist/components/import/ImportFormExamples.js +66 -57
- package/dist/components/import/ImportFormExamples.js.map +1 -1
- package/dist/components/minimap/Minimap.js +11 -22
- package/dist/components/minimap/Minimap.js.map +1 -1
- package/dist/components/minimap/MinimapSVG.d.ts +2 -1
- package/dist/components/minimap/MinimapSVG.js +3 -4
- package/dist/components/minimap/MinimapSVG.js.map +1 -1
- package/dist/components/minimap/minimapLayout.d.ts +10 -1
- package/dist/components/minimap/minimapLayout.js +15 -10
- package/dist/components/minimap/minimapLayout.js.map +1 -1
- package/dist/components/msa/{DomainLegend.d.ts → AnnotationLegend.d.ts} +2 -2
- package/dist/components/msa/{DomainLegend.js → AnnotationLegend.js} +4 -4
- package/dist/components/msa/AnnotationLegend.js.map +1 -0
- package/dist/components/msa/MSACanvas.js +2 -2
- package/dist/components/msa/MSACanvas.js.map +1 -1
- package/dist/components/msa/MSACanvasBlock.js +19 -16
- package/dist/components/msa/MSACanvasBlock.js.map +1 -1
- package/dist/components/msa/MSAMouseoverCanvas.js +14 -8
- package/dist/components/msa/MSAMouseoverCanvas.js.map +1 -1
- package/dist/components/msa/MSAPanel.js +2 -2
- package/dist/components/msa/MSAPanel.js.map +1 -1
- package/dist/components/msa/domainBandCursor.d.ts +17 -0
- package/dist/components/msa/domainBandCursor.js +39 -0
- package/dist/components/msa/domainBandCursor.js.map +1 -0
- package/dist/components/msa/renderBoxFeatureCanvasBlock.js +9 -6
- package/dist/components/msa/renderBoxFeatureCanvasBlock.js.map +1 -1
- package/dist/components/msa/renderMSABlock.js +14 -20
- package/dist/components/msa/renderMSABlock.js.map +1 -1
- package/dist/components/msa/renderMSAMouseover.js +32 -33
- package/dist/components/msa/renderMSAMouseover.js.map +1 -1
- package/dist/components/overlayColors.d.ts +2 -0
- package/dist/components/overlayColors.js +5 -0
- package/dist/components/overlayColors.js.map +1 -1
- package/dist/components/tree/TreeCanvas.js +29 -24
- package/dist/components/tree/TreeCanvas.js.map +1 -1
- package/dist/components/tree/TreeCanvasBlock.js +19 -12
- package/dist/components/tree/TreeCanvasBlock.js.map +1 -1
- package/dist/components/tree/TreeRuler.js +5 -2
- package/dist/components/tree/TreeRuler.js.map +1 -1
- package/dist/components/tree/renderTreeCanvas.d.ts +0 -38
- package/dist/components/tree/renderTreeCanvas.js +17 -17
- package/dist/components/tree/renderTreeCanvas.js.map +1 -1
- package/dist/ggplotPalettes.d.ts +0 -1
- package/dist/ggplotPalettes.js +0 -3
- package/dist/ggplotPalettes.js.map +1 -1
- package/dist/hierarchy.d.ts +2 -6
- package/dist/hierarchy.js +4 -6
- package/dist/hierarchy.js.map +1 -1
- package/dist/index.d.ts +2 -2
- package/dist/launchInterProScan.d.ts +0 -23
- package/dist/launchInterProScan.js +2 -5
- package/dist/launchInterProScan.js.map +1 -1
- package/dist/measureTextCanvas.js +21 -6
- package/dist/measureTextCanvas.js.map +1 -1
- package/dist/model.d.ts +50 -100
- package/dist/model.js +209 -219
- package/dist/model.js.map +1 -1
- package/dist/neighborJoining.js +12 -19
- package/dist/neighborJoining.js.map +1 -1
- package/dist/parseAsn1.js +32 -43
- package/dist/parseAsn1.js.map +1 -1
- package/dist/renderToSvg.js +5 -2
- package/dist/renderToSvg.js.map +1 -1
- package/dist/rowCoordinateCalculations.d.ts +13 -17
- package/dist/rowCoordinateCalculations.js +45 -39
- package/dist/rowCoordinateCalculations.js.map +1 -1
- package/dist/seqPosToGlobalCol.d.ts +6 -19
- package/dist/seqPosToGlobalCol.js +6 -33
- package/dist/seqPosToGlobalCol.js.map +1 -1
- package/dist/types.d.ts +4 -11
- package/dist/useCanvasAutorun.d.ts +23 -1
- package/dist/useCanvasAutorun.js +20 -8
- package/dist/useCanvasAutorun.js.map +1 -1
- package/dist/version.d.ts +1 -1
- package/dist/version.js +1 -1
- package/package.json +5 -5
- package/src/clustalX.ts +22 -22
- package/src/colSpace.test.ts +27 -0
- package/src/components/ConservationTrack.tsx +7 -5
- package/src/components/CopyButton.tsx +44 -0
- package/src/components/Loading.tsx +10 -1
- package/src/components/MSAView.tsx +25 -32
- package/src/components/ResizeHandles.tsx +60 -69
- package/src/components/ScrollbarThumb.tsx +48 -0
- package/src/components/SequenceTextArea.tsx +3 -16
- package/src/components/TextTrack.tsx +7 -12
- package/src/components/VerticalScrollbar.tsx +19 -33
- package/src/components/dialogs/FeatureDialog.tsx +3 -4
- package/src/components/dialogs/{UserProvidedDomainsDialog.tsx → InterProScanFileDialog.tsx} +6 -14
- package/src/components/dialogs/TrackInfoDialog.tsx +18 -20
- package/src/components/header/FileMenu.tsx +3 -3
- package/src/components/header/GappynessSlider.tsx +4 -1
- package/src/components/header/{getDomainsMenu.ts → getAnnotationsMenu.ts} +10 -9
- package/src/components/header/settingsMenuItems.ts +40 -72
- package/src/components/import/ImportForm.tsx +1 -1
- package/src/components/import/ImportFormExamples.tsx +82 -133
- package/src/components/minimap/Minimap.tsx +23 -31
- package/src/components/minimap/MinimapSVG.tsx +32 -31
- package/src/components/minimap/minimapLayout.test.ts +60 -0
- package/src/components/minimap/minimapLayout.ts +15 -10
- package/src/components/msa/{DomainLegend.tsx → AnnotationLegend.tsx} +7 -3
- package/src/components/msa/MSACanvas.tsx +3 -10
- package/src/components/msa/MSACanvasBlock.tsx +16 -21
- package/src/components/msa/MSAMouseoverCanvas.tsx +11 -9
- package/src/components/msa/MSAPanel.tsx +2 -2
- package/src/components/msa/domainBandCursor.ts +41 -0
- package/src/components/msa/renderBoxFeatureCanvasBlock.test.ts +51 -0
- package/src/components/msa/renderBoxFeatureCanvasBlock.ts +13 -8
- package/src/components/msa/renderMSABlock.ts +19 -23
- package/src/components/msa/renderMSAMouseover.ts +38 -35
- package/src/components/overlayColors.ts +6 -0
- package/src/components/tree/TreeCanvas.tsx +6 -4
- package/src/components/tree/TreeCanvasBlock.tsx +11 -12
- package/src/components/tree/TreeRuler.tsx +7 -2
- package/src/components/tree/renderTreeCanvas.test.ts +15 -7
- package/src/components/tree/renderTreeCanvas.ts +20 -17
- package/src/domainBands.test.ts +24 -0
- package/src/domainLetterColor.test.ts +80 -0
- package/src/ggplotPalettes.ts +0 -4
- package/src/hierarchy.test.ts +7 -7
- package/src/hierarchy.ts +6 -9
- package/src/index.ts +4 -1
- package/src/largeTree.test.ts +23 -2
- package/src/launchInterProScan.ts +3 -30
- package/src/loadErrorDisplay.test.tsx +102 -0
- package/src/measureTextCanvas.ts +22 -6
- package/src/model.ts +233 -244
- package/src/modelFilehandleLoaders.test.ts +137 -0
- package/src/neighborJoining.test.ts +12 -0
- package/src/neighborJoining.ts +12 -20
- package/src/parseAsn1.ts +32 -40
- package/src/{renderDomainLegendSvg.test.tsx → renderDomainsSvg.test.tsx} +44 -20
- package/src/renderMinimapSvg.test.tsx +109 -0
- package/src/renderToSvg.tsx +5 -2
- package/src/rowCoordinateCalculations.ts +48 -44
- package/src/seqPosToGlobalCol.test.ts +39 -51
- package/src/seqPosToGlobalCol.ts +6 -41
- package/src/types.ts +10 -15
- package/src/useCanvasAutorun.test.tsx +98 -0
- package/src/useCanvasAutorun.ts +30 -11
- package/src/version.ts +1 -1
- package/src/viewChrome.test.tsx +134 -0
- package/dist/components/dialogs/DomainDialog.d.ts +0 -6
- package/dist/components/dialogs/DomainDialog.js +0 -19
- package/dist/components/dialogs/DomainDialog.js.map +0 -1
- package/dist/components/dialogs/UserProvidedDomainsDialog.js.map +0 -1
- package/dist/components/header/SettingsMenu.d.ts +0 -6
- package/dist/components/header/SettingsMenu.js +0 -40
- package/dist/components/header/SettingsMenu.js.map +0 -1
- package/dist/components/header/getDomainsMenu.js.map +0 -1
- package/dist/components/msa/DomainLegend.js.map +0 -1
- package/src/components/dialogs/DomainDialog.tsx +0 -45
- package/src/components/header/SettingsMenu.tsx +0 -57
package/dist/clustalX.js
CHANGED
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@@ -16,33 +16,33 @@ const CYAN = 'rgb(26, 179, 179)';
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*/
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export function clustalXColumnColors(counts, col) {
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const total = counts.total(col);
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const
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const W =
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const L =
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const V =
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const I =
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const M =
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const A =
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const F =
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const C =
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const H =
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const P =
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const R =
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const K =
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const Q =
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const E =
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const D =
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const T =
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const S =
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const G =
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const Y =
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const N =
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const count = (letter) => counts.count(col, letter);
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const W = count('W');
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const L = count('L');
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const V = count('V');
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const I = count('I');
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const M = count('M');
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const A = count('A');
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const F = count('F');
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const C = count('C');
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const H = count('H');
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const P = count('P');
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const R = count('R');
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const K = count('K');
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const Q = count('Q');
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const E = count('E');
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const D = count('D');
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const T = count('T');
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const S = count('S');
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const G = count('G');
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const Y = count('Y');
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const N = count('N');
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const hydrophobic = W + L + V + I + M + A + F + C + H + P + Y;
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const KR = K + R;
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const QE = Q + E;
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const ED = E + D;
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const TS = T + S;
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const p = (
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const p = (subtotal) => subtotal / total;
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const colors = {};
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if (p(hydrophobic) > 0.6) {
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colors.W = BLUE;
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package/dist/clustalX.js.map
CHANGED
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@@ -1 +1 @@
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+
{"version":3,"file":"clustalX.js","sourceRoot":"","sources":["../src/clustalX.ts"],"names":[],"mappings":"AAAA,+BAA+B;AAC/B,kEAAkE;AAIlE,MAAM,IAAI,GAAG,kBAAkB,CAAA;AAC/B,MAAM,GAAG,GAAG,MAAM,CAAA;AAClB,MAAM,SAAS,GAAG,mBAAmB,CAAA;AACrC,MAAM,SAAS,GAAG,mBAAmB,CAAA;AACrC,MAAM,KAAK,GAAG,MAAM,CAAA;AACpB,MAAM,QAAQ,GAAG,gBAAgB,CAAA;AACjC,MAAM,IAAI,GAAG,oBAAoB,CAAA;AACjC,MAAM,MAAM,GAAG,mBAAmB,CAAA;AAClC,MAAM,MAAM,GAAG,kBAAkB,CAAA;AACjC,MAAM,IAAI,GAAG,mBAAmB,CAAA;AAEhC;;;GAGG;AACH,MAAM,UAAU,oBAAoB,CAAC,MAAoB,EAAE,GAAW;IACpE,MAAM,KAAK,GAAG,MAAM,CAAC,KAAK,CAAC,GAAG,CAAC,CAAA;IAC/B,MAAM,KAAK,GAAG,CAAC,MAAc,EAAE,EAAE,CAAC,MAAM,CAAC,KAAK,CAAC,GAAG,EAAE,MAAM,CAAC,CAAA;IAC3D,MAAM,CAAC,GAAG,KAAK,CAAC,GAAG,CAAC,CAAA;IACpB,MAAM,CAAC,GAAG,KAAK,CAAC,GAAG,CAAC,CAAA;IACpB,MAAM,CAAC,GAAG,KAAK,CAAC,GAAG,CAAC,CAAA;IACpB,MAAM,CAAC,GAAG,KAAK,CAAC,GAAG,CAAC,CAAA;IACpB,MAAM,CAAC,GAAG,KAAK,CAAC,GAAG,CAAC,CAAA;IACpB,MAAM,CAAC,GAAG,KAAK,CAAC,GAAG,CAAC,CAAA;IACpB,MAAM,CAAC,GAAG,KAAK,CAAC,GAAG,CAAC,CAAA;IACpB,MAAM,CAAC,GAAG,KAAK,CAAC,GAAG,CAAC,CAAA;IACpB,MAAM,CAAC,GAAG,KAAK,CAAC,GAAG,CAAC,CAAA;IACpB,MAAM,CAAC,GAAG,KAAK,CAAC,GAAG,CAAC,CAAA;IACpB,MAAM,CAAC,GAAG,KAAK,CAAC,GAAG,CAAC,CAAA;IACpB,MAAM,CAAC,GAAG,KAAK,CAAC,GAAG,CAAC,CAAA;IACpB,MAAM,CAAC,GAAG,KAAK,CAAC,GAAG,CAAC,CAAA;IACpB,MAAM,CAAC,GAAG,KAAK,CAAC,GAAG,CAAC,CAAA;IACpB,MAAM,CAAC,GAAG,KAAK,CAAC,GAAG,CAAC,CAAA;IACpB,MAAM,CAAC,GAAG,KAAK,CAAC,GAAG,CAAC,CAAA;IACpB,MAAM,CAAC,GAAG,KAAK,CAAC,GAAG,CAAC,CAAA;IACpB,MAAM,CAAC,GAAG,KAAK,CAAC,GAAG,CAAC,CAAA;IACpB,MAAM,CAAC,GAAG,KAAK,CAAC,GAAG,CAAC,CAAA;IACpB,MAAM,CAAC,GAAG,KAAK,CAAC,GAAG,CAAC,CAAA;IAEpB,MAAM,WAAW,GAAG,CAAC,GAAG,CAAC,GAAG,CAAC,GAAG,CAAC,GAAG,CAAC,GAAG,CAAC,GAAG,CAAC,GAAG,CAAC,GAAG,CAAC,GAAG,CAAC,GAAG,CAAC,CAAA;IAC7D,MAAM,EAAE,GAAG,CAAC,GAAG,CAAC,CAAA;IAChB,MAAM,EAAE,GAAG,CAAC,GAAG,CAAC,CAAA;IAChB,MAAM,EAAE,GAAG,CAAC,GAAG,CAAC,CAAA;IAChB,MAAM,EAAE,GAAG,CAAC,GAAG,CAAC,CAAA;IAChB,MAAM,CAAC,GAAG,CAAC,QAAgB,EAAE,EAAE,CAAC,QAAQ,GAAG,KAAK,CAAA;IAEhD,MAAM,MAAM,GAA2B,EAAE,CAAA;IAEzC,IAAI,CAAC,CAAC,WAAW,CAAC,GAAG,GAAG,EAAE,CAAC;QACzB,MAAM,CAAC,CAAC,GAAG,IAAI,CAAA;QACf,MAAM,CAAC,CAAC,GAAG,IAAI,CAAA;QACf,MAAM,CAAC,CAAC,GAAG,IAAI,CAAA;QACf,MAAM,CAAC,CAAC,GAAG,IAAI,CAAA;QACf,MAAM,CAAC,CAAC,GAAG,IAAI,CAAA;QACf,MAAM,CAAC,CAAC,GAAG,IAAI,CAAA;QACf,MAAM,CAAC,CAAC,GAAG,IAAI,CAAA;QACf,MAAM,CAAC,CAAC,GAAG,IAAI,CAAA;IACjB,CAAC;IAED,IAAI,CAAC,CAAC,EAAE,CAAC,GAAG,GAAG,IAAI,CAAC,CAAC,CAAC,CAAC,GAAG,GAAG,IAAI,CAAC,CAAC,CAAC,CAAC,GAAG,GAAG,IAAI,CAAC,CAAC,CAAC,CAAC,GAAG,GAAG,EAAE,CAAC;QAC1D,MAAM,CAAC,CAAC,GAAG,GAAG,CAAA;QACd,MAAM,CAAC,CAAC,GAAG,GAAG,CAAA;IAChB,CAAC;IAED,IAAI,CAAC,CAAC,EAAE,CAAC,GAAG,GAAG,IAAI,CAAC,CAAC,EAAE,CAAC,GAAG,GAAG,IAAI,CAAC,CAAC,CAAC,CAAC,GAAG,GAAG,IAAI,CAAC,CAAC,CAAC,CAAC,GAAG,GAAG,IAAI,CAAC,CAAC,CAAC,CAAC,GAAG,GAAG,EAAE,CAAC;QACzE,MAAM,CAAC,CAAC,GAAG,SAAS,CAAA;IACtB,CAAC;IAED,IAAI,CAAC,CAAC,EAAE,CAAC,GAAG,GAAG,IAAI,CAAC,CAAC,EAAE,CAAC,GAAG,GAAG,IAAI,CAAC,CAAC,CAAC,CAAC,GAAG,GAAG,IAAI,CAAC,CAAC,CAAC,CAAC,GAAG,GAAG,IAAI,CAAC,CAAC,CAAC,CAAC,GAAG,GAAG,EAAE,CAAC;QACzE,MAAM,CAAC,CAAC,GAAG,SAAS,CAAA;IACtB,CAAC;IAED,IAAI,CAAC,CAAC,CAAC,CAAC,GAAG,GAAG,IAAI,CAAC,CAAC,CAAC,CAAC,GAAG,IAAI,EAAE,CAAC;QAC9B,MAAM,CAAC,CAAC,GAAG,KAAK,CAAA;IAClB,CAAC;IAED,IACE,CAAC,CAAC,EAAE,CAAC,GAAG,GAAG;QACX,CAAC,CAAC,EAAE,CAAC,GAAG,GAAG;QACX,CAAC,CAAC,CAAC,CAAC,GAAG,IAAI;QACX,CAAC,CAAC,CAAC,CAAC,GAAG,IAAI;QACX,CAAC,CAAC,CAAC,CAAC,GAAG,IAAI;QACX,CAAC,CAAC,CAAC,CAAC,GAAG,IAAI,EACX,CAAC;QACD,MAAM,CAAC,CAAC,GAAG,KAAK,CAAA;IAClB,CAAC;IAED,IAAI,CAAC,CAAC,WAAW,CAAC,GAAG,GAAG,IAAI,CAAC,CAAC,EAAE,CAAC,GAAG,GAAG,IAAI,CAAC,CAAC,CAAC,CAAC,GAAG,IAAI,IAAI,CAAC,CAAC,CAAC,CAAC,GAAG,IAAI,EAAE,CAAC;QACtE,MAAM,CAAC,CAAC,GAAG,QAAQ,CAAA;QACnB,MAAM,CAAC,CAAC,GAAG,QAAQ,CAAA;IACrB,CAAC;IAED,IAAI,CAAC,CAAC,CAAC,CAAC,GAAG,IAAI,EAAE,CAAC;QAChB,MAAM,CAAC,CAAC,GAAG,IAAI,CAAA;IACjB,CAAC;IAED,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC;QACV,MAAM,CAAC,CAAC,GAAG,MAAM,CAAA;IACnB,CAAC;IAED,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC;QACV,MAAM,CAAC,CAAC,GAAG,MAAM,CAAA;IACnB,CAAC;IAED,IACE,CAAC,CAAC,WAAW,CAAC,GAAG,GAAG;QACpB,CAAC,CAAC,CAAC,CAAC,GAAG,IAAI;QACX,CAAC,CAAC,CAAC,CAAC,GAAG,IAAI;QACX,CAAC,CAAC,CAAC,CAAC,GAAG,IAAI;QACX,CAAC,CAAC,CAAC,CAAC,GAAG,IAAI;QACX,CAAC,CAAC,CAAC,CAAC,GAAG,IAAI;QACX,CAAC,CAAC,CAAC,CAAC,GAAG,IAAI;QACX,CAAC,CAAC,CAAC,CAAC,GAAG,IAAI;QACX,CAAC,CAAC,CAAC,CAAC,GAAG,IAAI;QACX,CAAC,CAAC,CAAC,CAAC,GAAG,IAAI;QACX,CAAC,CAAC,CAAC,CAAC,GAAG,IAAI;QACX,CAAC,CAAC,CAAC,CAAC,GAAG,IAAI;QACX,CAAC,CAAC,CAAC,CAAC,GAAG,IAAI,EACX,CAAC;QACD,MAAM,CAAC,CAAC,GAAG,IAAI,CAAA;QACf,MAAM,CAAC,CAAC,GAAG,IAAI,CAAA;IACjB,CAAC;IAED,OAAO,MAAM,CAAA;AACf,CAAC"}
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@@ -5,22 +5,27 @@ import { ConservationTrackResizeHandle } from './ResizeHandles.js';
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import { barTrackValues, drawConservationBars, } from './tracks/renderTracksSvg.js';
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const ConservationBlock = observer(function ({ model, track, offsetX, trackHeight, }) {
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const { blockSize, scrollX, highResScaleFactor } = model;
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const ref = useCanvasAutorun(
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const ref = useCanvasAutorun({
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const { colWidth } = model;
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ctx.resetTransform();
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ctx.scale(highResScaleFactor, highResScaleFactor);
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ctx.clearRect(0, 0, blockSize, trackHeight);
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ctx.translate(-offsetX, 0);
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drawConservationBars({
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ctx,
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values: barTrackValues(model, track.model.id),
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color: track.model.barColor ?? 'gray',
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colWidth,
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trackHeight,
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offsetX,
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blockSize,
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});
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},
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width: blockSize * highResScaleFactor,
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deps: [model, track, offsetX, trackHeight],
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});
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return (React.createElement("canvas", { ref: ref, height: trackHeight * highResScaleFactor, width: blockSize * highResScaleFactor, style: {
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left: scrollX + offsetX,
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@@ -1 +1 @@
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1
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-
{"version":3,"file":"ConservationTrack.js","sourceRoot":"","sources":["../../src/components/ConservationTrack.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,OAAO,CAAA;AAEzB,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AAErC,OAAO,EAAE,gBAAgB,EAAE,MAAM,wBAAwB,CAAA;AACzD,OAAO,EAAE,6BAA6B,EAAE,MAAM,oBAAqB,CAAA;AACnE,OAAO,EACL,cAAc,EACd,oBAAoB,GACrB,MAAM,6BAA6B,CAAA;AAKpC,MAAM,iBAAiB,GAAG,QAAQ,CAAC,UAAU,EAC3C,KAAK,EACL,KAAK,EACL,OAAO,EACP,WAAW,GAMZ;IACC,MAAM,EAAE,SAAS,EAAE,OAAO,EAAE,kBAAkB,EAAE,GAAG,KAAK,CAAA;IAExD,MAAM,GAAG,GAAG,gBAAgB,
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1
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+
{"version":3,"file":"ConservationTrack.js","sourceRoot":"","sources":["../../src/components/ConservationTrack.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,OAAO,CAAA;AAEzB,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AAErC,OAAO,EAAE,gBAAgB,EAAE,MAAM,wBAAwB,CAAA;AACzD,OAAO,EAAE,6BAA6B,EAAE,MAAM,oBAAqB,CAAA;AACnE,OAAO,EACL,cAAc,EACd,oBAAoB,GACrB,MAAM,6BAA6B,CAAA;AAKpC,MAAM,iBAAiB,GAAG,QAAQ,CAAC,UAAU,EAC3C,KAAK,EACL,KAAK,EACL,OAAO,EACP,WAAW,GAMZ;IACC,MAAM,EAAE,SAAS,EAAE,OAAO,EAAE,kBAAkB,EAAE,GAAG,KAAK,CAAA;IAExD,MAAM,GAAG,GAAG,gBAAgB,CAAC;QAC3B,IAAI,EAAE,GAAG,CAAC,EAAE;YACV,MAAM,EAAE,QAAQ,EAAE,GAAG,KAAK,CAAA;YAC1B,GAAG,CAAC,cAAc,EAAE,CAAA;YACpB,GAAG,CAAC,KAAK,CAAC,kBAAkB,EAAE,kBAAkB,CAAC,CAAA;YACjD,GAAG,CAAC,SAAS,CAAC,CAAC,EAAE,CAAC,EAAE,SAAS,EAAE,WAAW,CAAC,CAAA;YAC3C,GAAG,CAAC,SAAS,CAAC,CAAC,OAAO,EAAE,CAAC,CAAC,CAAA;YAE1B,oBAAoB,CAAC;gBACnB,GAAG;gBACH,MAAM,EAAE,cAAc,CAAC,KAAK,EAAE,KAAK,CAAC,KAAK,CAAC,EAAE,CAAC;gBAC7C,KAAK,EAAE,KAAK,CAAC,KAAK,CAAC,QAAQ,IAAI,MAAM;gBACrC,QAAQ;gBACR,WAAW;gBACX,OAAO;gBACP,SAAS;aACV,CAAC,CAAA;QACJ,CAAC;QACD,KAAK,EAAE,SAAS,GAAG,kBAAkB;QACrC,MAAM,EAAE,WAAW,GAAG,kBAAkB;QACxC,IAAI,EAAE,CAAC,KAAK,EAAE,KAAK,EAAE,OAAO,EAAE,WAAW,CAAC;KAC3C,CAAC,CAAA;IAEF,OAAO,CACL,gCACE,GAAG,EAAE,GAAG,EACR,MAAM,EAAE,WAAW,GAAG,kBAAkB,EACxC,KAAK,EAAE,SAAS,GAAG,kBAAkB,EACrC,KAAK,EAAE;YACL,QAAQ,EAAE,UAAU;YACpB,IAAI,EAAE,OAAO,GAAG,OAAO;YACvB,KAAK,EAAE,SAAS;YAChB,MAAM,EAAE,WAAW;SACpB,GACD,CACH,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,MAAM,iBAAiB,GAAG,QAAQ,CAAC,UAAU,EAC3C,KAAK,EACL,KAAK,GAIN;IACC,MAAM,EAAE,OAAO,EAAE,YAAY,EAAE,GAAG,KAAK,CAAA;IACvC,MAAM,WAAW,GAAG,KAAK,CAAC,KAAK,CAAC,MAAM,CAAA;IAEtC,OAAO,CACL,6BACE,KAAK,EAAE;YACL,QAAQ,EAAE,UAAU;YACpB,MAAM,EAAE,WAAW;YACnB,KAAK,EAAE,YAAY;YACnB,QAAQ,EAAE,QAAQ;SACnB;QAEA,OAAO,CAAC,GAAG,CAAC,EAAE,CAAC,EAAE,CAAC,CACjB,oBAAC,iBAAiB,IAChB,GAAG,EAAE,EAAE,EACP,KAAK,EAAE,KAAK,EACZ,KAAK,EAAE,KAAK,EACZ,OAAO,EAAE,EAAE,EACX,WAAW,EAAE,WAAW,GACxB,CACH,CAAC;QACF,oBAAC,6BAA6B,IAAC,KAAK,EAAE,KAAK,GAAI,CAC3C,CACP,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,eAAe,iBAAiB,CAAA"}
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|
@@ -0,0 +1,9 @@
|
|
|
1
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+
import React from 'react';
|
|
2
|
+
/**
|
|
3
|
+
* Copy-to-clipboard button that confirms on the label for a moment. The timer is
|
|
4
|
+
* cleared on unmount, since these live in dialogs the copy itself often closes.
|
|
5
|
+
*/
|
|
6
|
+
export default function CopyButton({ text, label, }: {
|
|
7
|
+
text: string;
|
|
8
|
+
label?: string;
|
|
9
|
+
}): React.JSX.Element;
|
|
@@ -0,0 +1,23 @@
|
|
|
1
|
+
import React, { useEffect, useRef, useState } from 'react';
|
|
2
|
+
import { Button } from '@mui/material';
|
|
3
|
+
import copy from '../vendor/copyToClipboard.js';
|
|
4
|
+
/**
|
|
5
|
+
* Copy-to-clipboard button that confirms on the label for a moment. The timer is
|
|
6
|
+
* cleared on unmount, since these live in dialogs the copy itself often closes.
|
|
7
|
+
*/
|
|
8
|
+
export default function CopyButton({ text, label = 'Copy to clipboard', }) {
|
|
9
|
+
const [copied, setCopied] = useState(false);
|
|
10
|
+
const timer = useRef(undefined);
|
|
11
|
+
useEffect(() => () => {
|
|
12
|
+
clearTimeout(timer.current);
|
|
13
|
+
}, []);
|
|
14
|
+
return (React.createElement(Button, { variant: "contained", color: "primary", onClick: () => {
|
|
15
|
+
copy(text);
|
|
16
|
+
setCopied(true);
|
|
17
|
+
clearTimeout(timer.current);
|
|
18
|
+
timer.current = setTimeout(() => {
|
|
19
|
+
setCopied(false);
|
|
20
|
+
}, 500);
|
|
21
|
+
} }, copied ? 'Copied!' : label));
|
|
22
|
+
}
|
|
23
|
+
//# sourceMappingURL=CopyButton.js.map
|
|
@@ -0,0 +1 @@
|
|
|
1
|
+
{"version":3,"file":"CopyButton.js","sourceRoot":"","sources":["../../src/components/CopyButton.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,SAAS,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,OAAO,CAAA;AAE1D,OAAO,EAAE,MAAM,EAAE,MAAM,eAAe,CAAA;AAEtC,OAAO,IAAI,MAAM,8BAA8B,CAAA;AAE/C;;;GAGG;AACH,MAAM,CAAC,OAAO,UAAU,UAAU,CAAC,EACjC,IAAI,EACJ,KAAK,GAAG,mBAAmB,GAI5B;IACC,MAAM,CAAC,MAAM,EAAE,SAAS,CAAC,GAAG,QAAQ,CAAC,KAAK,CAAC,CAAA;IAC3C,MAAM,KAAK,GAAG,MAAM,CAAgC,SAAS,CAAC,CAAA;IAE9D,SAAS,CACP,GAAG,EAAE,CAAC,GAAG,EAAE;QACT,YAAY,CAAC,KAAK,CAAC,OAAO,CAAC,CAAA;IAC7B,CAAC,EACD,EAAE,CACH,CAAA;IAED,OAAO,CACL,oBAAC,MAAM,IACL,OAAO,EAAC,WAAW,EACnB,KAAK,EAAC,SAAS,EACf,OAAO,EAAE,GAAG,EAAE;YACZ,IAAI,CAAC,IAAI,CAAC,CAAA;YACV,SAAS,CAAC,IAAI,CAAC,CAAA;YACf,YAAY,CAAC,KAAK,CAAC,OAAO,CAAC,CAAA;YAC3B,KAAK,CAAC,OAAO,GAAG,UAAU,CAAC,GAAG,EAAE;gBAC9B,SAAS,CAAC,KAAK,CAAC,CAAA;YAClB,CAAC,EAAE,GAAG,CAAC,CAAA;QACT,CAAC,IAEA,MAAM,CAAC,CAAC,CAAC,SAAS,CAAC,CAAC,CAAC,KAAK,CACpB,CACV,CAAA;AACH,CAAC"}
|
|
@@ -26,9 +26,9 @@ const Reset = observer(function ({ model, error, }) {
|
|
|
26
26
|
} }, "Return to import form")));
|
|
27
27
|
});
|
|
28
28
|
const Loading = observer(function ({ model }) {
|
|
29
|
-
const { isLoading, dataInitialized, msaFilehandle, treeFilehandle } = model;
|
|
29
|
+
const { isLoading, dataInitialized, error, msaFilehandle, treeFilehandle } = model;
|
|
30
30
|
const hasPendingFilehandle = !!(msaFilehandle || treeFilehandle);
|
|
31
|
-
return (React.createElement("div", null, React.createElement(ErrorBoundary, { FallbackComponent: e => React.createElement(Reset, { model: model, error: e.error }) }, dataInitialized ? (isLoading ? (React.createElement(LoadingSpinner, { model: model })) : (React.createElement(MSAView, { model: model }))) : hasPendingFilehandle || isLoading ? (React.createElement(LoadingSpinner, { model: model })) : (React.createElement(ImportForm, { model: model })))));
|
|
31
|
+
return (React.createElement("div", null, React.createElement(ErrorBoundary, { FallbackComponent: e => React.createElement(Reset, { model: model, error: e.error }) }, dataInitialized ? (isLoading ? (React.createElement(LoadingSpinner, { model: model })) : (React.createElement(MSAView, { model: model }))) : error ? (React.createElement(Reset, { model: model, error: error })) : hasPendingFilehandle || isLoading ? (React.createElement(LoadingSpinner, { model: model })) : (React.createElement(ImportForm, { model: model })))));
|
|
32
32
|
});
|
|
33
33
|
export default Loading;
|
|
34
34
|
//# sourceMappingURL=Loading.js.map
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"Loading.js","sourceRoot":"","sources":["../../src/components/Loading.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,OAAO,CAAA;AAEzB,OAAO,EAAE,YAAY,EAAE,MAAM,kBAAkB,CAAA;AAC/C,OAAO,EAAE,aAAa,EAAE,MAAM,gCAAgC,CAAA;AAC9D,OAAO,EAAE,MAAM,EAAE,UAAU,EAAE,MAAM,eAAe,CAAA;AAClD,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AAErC,OAAO,OAAO,MAAM,cAAe,CAAA;AACnC,OAAO,UAAU,MAAM,wBAAyB,CAAA;AAIhD,MAAM,cAAc,GAAG,QAAQ,CAAC,UAAU,EAAE,KAAK,EAA2B;IAC1E,MAAM,EAAE,MAAM,EAAE,GAAG,KAAK,CAAA;IACxB,OAAO,CACL,6BACE,KAAK,EAAE,EAAE,OAAO,EAAE,MAAM,EAAE,UAAU,EAAE,QAAQ,EAAE,GAAG,EAAE,EAAE,EAAE,OAAO,EAAE,EAAE,EAAE;QAEtE,6BACE,KAAK,EAAC,IAAI,EACV,MAAM,EAAC,IAAI,EACX,OAAO,EAAC,WAAW,EACnB,KAAK,EAAC,4BAA4B;YAElC,mCACG,0DAA0D,CACrD;YACR,gCACE,EAAE,EAAC,IAAI,EACP,EAAE,EAAC,IAAI,EACP,CAAC,EAAC,IAAI,EACN,MAAM,EAAC,MAAM,EACb,WAAW,EAAC,GAAG,EACf,IAAI,EAAC,MAAM,GACX;YACF,8BACE,CAAC,EAAC,yBAAyB,EAC3B,MAAM,EAAC,SAAS,EAChB,WAAW,EAAC,GAAG,EACf,IAAI,EAAC,MAAM,EACX,aAAa,EAAC,OAAO,EACrB,KAAK,EAAE;oBACL,SAAS,EAAE,4BAA4B;oBACvC,eAAe,EAAE,QAAQ;iBAC1B,GACD,CACE;QACN,oBAAC,UAAU,IAAC,OAAO,EAAC,IAAI,IAAE,MAAM,EAAE,GAAG,IAAI,YAAY,CAAc;QAClE,MAAM,EAAE,QAAQ,CAAC,CAAC,CAAC,CAClB,oBAAC,MAAM,IACL,OAAO,EAAC,UAAU,EAClB,IAAI,EAAC,OAAO,EACZ,OAAO,EAAE,GAAG,EAAE,CAAC,MAAM,CAAC,QAAQ,EAAE,EAAE,aAG3B,CACV,CAAC,CAAC,CAAC,IAAI,CACJ,CACP,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,MAAM,KAAK,GAAG,QAAQ,CAAC,UAAU,EAC/B,KAAK,EACL,KAAK,GAIN;IACC,OAAO,CACL;QACE,oBAAC,YAAY,IAAC,KAAK,EAAE,KAAK,GAAI;QAC9B,oBAAC,MAAM,IACL,OAAO,EAAC,WAAW,EACnB,KAAK,EAAC,SAAS,EACf,OAAO,EAAE,GAAG,EAAE;gBACZ,KAAK,CAAC,KAAK,EAAE,CAAA;YACf,CAAC,4BAGM,CACL,CACP,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,MAAM,OAAO,GAAG,QAAQ,CAAC,UAAU,EAAE,KAAK,EAA2B;IACnE,MAAM,EAAE,SAAS,EAAE,eAAe,EAAE,aAAa,EAAE,cAAc,EAAE,
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1
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+
{"version":3,"file":"Loading.js","sourceRoot":"","sources":["../../src/components/Loading.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,OAAO,CAAA;AAEzB,OAAO,EAAE,YAAY,EAAE,MAAM,kBAAkB,CAAA;AAC/C,OAAO,EAAE,aAAa,EAAE,MAAM,gCAAgC,CAAA;AAC9D,OAAO,EAAE,MAAM,EAAE,UAAU,EAAE,MAAM,eAAe,CAAA;AAClD,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AAErC,OAAO,OAAO,MAAM,cAAe,CAAA;AACnC,OAAO,UAAU,MAAM,wBAAyB,CAAA;AAIhD,MAAM,cAAc,GAAG,QAAQ,CAAC,UAAU,EAAE,KAAK,EAA2B;IAC1E,MAAM,EAAE,MAAM,EAAE,GAAG,KAAK,CAAA;IACxB,OAAO,CACL,6BACE,KAAK,EAAE,EAAE,OAAO,EAAE,MAAM,EAAE,UAAU,EAAE,QAAQ,EAAE,GAAG,EAAE,EAAE,EAAE,OAAO,EAAE,EAAE,EAAE;QAEtE,6BACE,KAAK,EAAC,IAAI,EACV,MAAM,EAAC,IAAI,EACX,OAAO,EAAC,WAAW,EACnB,KAAK,EAAC,4BAA4B;YAElC,mCACG,0DAA0D,CACrD;YACR,gCACE,EAAE,EAAC,IAAI,EACP,EAAE,EAAC,IAAI,EACP,CAAC,EAAC,IAAI,EACN,MAAM,EAAC,MAAM,EACb,WAAW,EAAC,GAAG,EACf,IAAI,EAAC,MAAM,GACX;YACF,8BACE,CAAC,EAAC,yBAAyB,EAC3B,MAAM,EAAC,SAAS,EAChB,WAAW,EAAC,GAAG,EACf,IAAI,EAAC,MAAM,EACX,aAAa,EAAC,OAAO,EACrB,KAAK,EAAE;oBACL,SAAS,EAAE,4BAA4B;oBACvC,eAAe,EAAE,QAAQ;iBAC1B,GACD,CACE;QACN,oBAAC,UAAU,IAAC,OAAO,EAAC,IAAI,IAAE,MAAM,EAAE,GAAG,IAAI,YAAY,CAAc;QAClE,MAAM,EAAE,QAAQ,CAAC,CAAC,CAAC,CAClB,oBAAC,MAAM,IACL,OAAO,EAAC,UAAU,EAClB,IAAI,EAAC,OAAO,EACZ,OAAO,EAAE,GAAG,EAAE,CAAC,MAAM,CAAC,QAAQ,EAAE,EAAE,aAG3B,CACV,CAAC,CAAC,CAAC,IAAI,CACJ,CACP,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,MAAM,KAAK,GAAG,QAAQ,CAAC,UAAU,EAC/B,KAAK,EACL,KAAK,GAIN;IACC,OAAO,CACL;QACE,oBAAC,YAAY,IAAC,KAAK,EAAE,KAAK,GAAI;QAC9B,oBAAC,MAAM,IACL,OAAO,EAAC,WAAW,EACnB,KAAK,EAAC,SAAS,EACf,OAAO,EAAE,GAAG,EAAE;gBACZ,KAAK,CAAC,KAAK,EAAE,CAAA;YACf,CAAC,4BAGM,CACL,CACP,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,MAAM,OAAO,GAAG,QAAQ,CAAC,UAAU,EAAE,KAAK,EAA2B;IACnE,MAAM,EAAE,SAAS,EAAE,eAAe,EAAE,KAAK,EAAE,aAAa,EAAE,cAAc,EAAE,GACxE,KAAK,CAAA;IACP,MAAM,oBAAoB,GAAG,CAAC,CAAC,CAAC,aAAa,IAAI,cAAc,CAAC,CAAA;IAEhE,OAAO,CACL,iCACE,oBAAC,aAAa,IACZ,iBAAiB,EAAE,CAAC,CAAC,EAAE,CAAC,oBAAC,KAAK,IAAC,KAAK,EAAE,KAAK,EAAE,KAAK,EAAE,CAAC,CAAC,KAAK,GAAI,IAE9D,eAAe,CAAC,CAAC,CAAC,CACjB,SAAS,CAAC,CAAC,CAAC,CACV,oBAAC,cAAc,IAAC,KAAK,EAAE,KAAK,GAAI,CACjC,CAAC,CAAC,CAAC,CACF,oBAAC,OAAO,IAAC,KAAK,EAAE,KAAK,GAAI,CAC1B,CACF,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,CAOV,oBAAC,KAAK,IAAC,KAAK,EAAE,KAAK,EAAE,KAAK,EAAE,KAAK,GAAI,CACtC,CAAC,CAAC,CAAC,oBAAoB,IAAI,SAAS,CAAC,CAAC,CAAC,CACtC,oBAAC,cAAc,IAAC,KAAK,EAAE,KAAK,GAAI,CACjC,CAAC,CAAC,CAAC,CACF,oBAAC,UAAU,IAAC,KAAK,EAAE,KAAK,GAAI,CAC7B,CACa,CACZ,CACP,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,eAAe,OAAO,CAAA"}
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@@ -6,6 +6,7 @@ import VerticalScrollbar from './VerticalScrollbar.js';
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6
6
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import Header from './header/Header.js';
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7
7
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import Minimap from './minimap/Minimap.js';
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8
8
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import MSAPanel from './msa/MSAPanel.js';
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9
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+
import { clickColor, hoverColor } from './overlayColors.js';
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9
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|
import TreePanel from './tree/TreePanel.js';
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import TreeRuler from './tree/TreeRuler.js';
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const TopArea = observer(function ({ model }) {
|
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@@ -15,36 +16,29 @@ const TopArea = observer(function ({ model }) {
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15
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showHorizontalScrollbar ? React.createElement(Minimap, { model: model }) : null));
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});
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const TrackColumnIndicator = observer(function ({ model, }) {
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-
const { mouseCol, mouseClickCol, colWidth, scrollX, treeAreaWidth, resizeHandleWidth, totalTrackAreaHeight,
|
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|
-
|
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20
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-
const
|
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19
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+
const { mouseCol, mouseClickCol, colWidth, scrollX, treeAreaWidth, resizeHandleWidth, totalTrackAreaHeight, msaCanvasWidth, } = model;
|
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20
|
+
// hovered column, then the pinned one, matching the alignment's own overlay
|
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21
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+
const bands = [
|
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22
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+
{ col: mouseCol, color: hoverColor },
|
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+
{ col: mouseClickCol, color: clickColor },
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+
];
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|
return (React.createElement("div", { style: {
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26
|
position: 'absolute',
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23
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-
left,
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+
left: treeAreaWidth + resizeHandleWidth,
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|
top: 0,
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-
width:
|
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+
width: msaCanvasWidth,
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height: totalTrackAreaHeight,
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27
31
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overflow: 'hidden',
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pointerEvents: 'none',
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} },
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} })) : null,
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mouseClickCol !== undefined ? (React.createElement("div", { style: {
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position: 'absolute',
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-
left: mouseClickCol * colWidth + scrollX,
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top: 0,
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width: colWidth,
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height: totalTrackAreaHeight,
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-
backgroundColor: 'rgba(128,128,0,0.2)',
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-
zIndex: 100,
|
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47
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-
} })) : null));
|
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33
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+
} }, bands.map(({ col, color }) => col === undefined ? null : (React.createElement("div", { key: color, style: {
|
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position: 'absolute',
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left: col * colWidth + scrollX,
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top: 0,
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width: colWidth,
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height: totalTrackAreaHeight,
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+
backgroundColor: color,
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zIndex: 100,
|
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+
} })))));
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42
|
});
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43
|
const TrackArea = observer(function ({ model }) {
|
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50
44
|
const { turnedOnTracks } = model;
|
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@@ -1 +1 @@
|
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|
1
|
-
{"version":3,"file":"MSAView.js","sourceRoot":"","sources":["../../src/components/MSAView.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,QAAQ,EAAE,MAAM,OAAO,CAAA;AAEvC,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AAErC,OAAO,EACL,sBAAsB,EACtB,oBAAoB,GACrB,MAAM,oBAAqB,CAAA;AAC5B,OAAO,KAAK,MAAM,YAAa,CAAA;AAC/B,OAAO,iBAAiB,MAAM,wBAAyB,CAAA;AACvD,OAAO,MAAM,MAAM,oBAAqB,CAAA;AACxC,OAAO,OAAO,MAAM,sBAAuB,CAAA;AAC3C,OAAO,QAAQ,MAAM,mBAAoB,CAAA;AACzC,OAAO,SAAS,MAAM,qBAAsB,CAAA;AAC5C,OAAO,SAAS,MAAM,qBAAsB,CAAA;AAI5C,MAAM,OAAO,GAAG,QAAQ,CAAC,UAAU,EAAE,KAAK,EAA2B;IACnE,MAAM,EAAE,uBAAuB,EAAE,GAAG,KAAK,CAAA;IACzC,OAAO,CACL,6BAAK,KAAK,EAAE,EAAE,OAAO,EAAE,MAAM,EAAE;QAC7B,oBAAC,SAAS,IAAC,KAAK,EAAE,KAAK,GAAI;QAC1B,uBAAuB,CAAC,CAAC,CAAC,oBAAC,OAAO,IAAC,KAAK,EAAE,KAAK,GAAI,CAAC,CAAC,CAAC,IAAI,CACvD,CACP,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,MAAM,oBAAoB,GAAG,QAAQ,CAAC,UAAU,EAC9C,KAAK,GAGN;IACC,MAAM,EACJ,QAAQ,EACR,aAAa,EACb,QAAQ,EACR,OAAO,EACP,aAAa,EACb,iBAAiB,EACjB,oBAAoB,EACpB,
|
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1
|
+
{"version":3,"file":"MSAView.js","sourceRoot":"","sources":["../../src/components/MSAView.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,QAAQ,EAAE,MAAM,OAAO,CAAA;AAEvC,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AAErC,OAAO,EACL,sBAAsB,EACtB,oBAAoB,GACrB,MAAM,oBAAqB,CAAA;AAC5B,OAAO,KAAK,MAAM,YAAa,CAAA;AAC/B,OAAO,iBAAiB,MAAM,wBAAyB,CAAA;AACvD,OAAO,MAAM,MAAM,oBAAqB,CAAA;AACxC,OAAO,OAAO,MAAM,sBAAuB,CAAA;AAC3C,OAAO,QAAQ,MAAM,mBAAoB,CAAA;AACzC,OAAO,EAAE,UAAU,EAAE,UAAU,EAAE,MAAM,oBAAoB,CAAA;AAC3D,OAAO,SAAS,MAAM,qBAAsB,CAAA;AAC5C,OAAO,SAAS,MAAM,qBAAsB,CAAA;AAI5C,MAAM,OAAO,GAAG,QAAQ,CAAC,UAAU,EAAE,KAAK,EAA2B;IACnE,MAAM,EAAE,uBAAuB,EAAE,GAAG,KAAK,CAAA;IACzC,OAAO,CACL,6BAAK,KAAK,EAAE,EAAE,OAAO,EAAE,MAAM,EAAE;QAC7B,oBAAC,SAAS,IAAC,KAAK,EAAE,KAAK,GAAI;QAC1B,uBAAuB,CAAC,CAAC,CAAC,oBAAC,OAAO,IAAC,KAAK,EAAE,KAAK,GAAI,CAAC,CAAC,CAAC,IAAI,CACvD,CACP,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,MAAM,oBAAoB,GAAG,QAAQ,CAAC,UAAU,EAC9C,KAAK,GAGN;IACC,MAAM,EACJ,QAAQ,EACR,aAAa,EACb,QAAQ,EACR,OAAO,EACP,aAAa,EACb,iBAAiB,EACjB,oBAAoB,EACpB,cAAc,GACf,GAAG,KAAK,CAAA;IAET,4EAA4E;IAC5E,MAAM,KAAK,GAAG;QACZ,EAAE,GAAG,EAAE,QAAQ,EAAE,KAAK,EAAE,UAAU,EAAE;QACpC,EAAE,GAAG,EAAE,aAAa,EAAE,KAAK,EAAE,UAAU,EAAE;KAC1C,CAAA;IAED,OAAO,CACL,6BACE,KAAK,EAAE;YACL,QAAQ,EAAE,UAAU;YACpB,IAAI,EAAE,aAAa,GAAG,iBAAiB;YACvC,GAAG,EAAE,CAAC;YACN,KAAK,EAAE,cAAc;YACrB,MAAM,EAAE,oBAAoB;YAC5B,QAAQ,EAAE,QAAQ;YAClB,aAAa,EAAE,MAAM;SACtB,IAEA,KAAK,CAAC,GAAG,CAAC,CAAC,EAAE,GAAG,EAAE,KAAK,EAAE,EAAE,EAAE,CAC5B,GAAG,KAAK,SAAS,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CACzB,6BACE,GAAG,EAAE,KAAK,EACV,KAAK,EAAE;YACL,QAAQ,EAAE,UAAU;YACpB,IAAI,EAAE,GAAG,GAAG,QAAQ,GAAG,OAAO;YAC9B,GAAG,EAAE,CAAC;YACN,KAAK,EAAE,QAAQ;YACf,MAAM,EAAE,oBAAoB;YAC5B,eAAe,EAAE,KAAK;YACtB,MAAM,EAAE,GAAG;SACZ,GACD,CACH,CACF,CACG,CACP,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,MAAM,SAAS,GAAG,QAAQ,CAAC,UAAU,EAAE,KAAK,EAA2B;IACrE,MAAM,EAAE,cAAc,EAAE,GAAG,KAAK,CAAA;IAChC,IAAI,cAAc,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;QAChC,OAAO,IAAI,CAAA;IACb,CAAC;IACD,OAAO,CACL,6BAAK,KAAK,EAAE,EAAE,QAAQ,EAAE,UAAU,EAAE;QAClC,oBAAC,oBAAoB,IAAC,KAAK,EAAE,KAAK,GAAI;QACrC,cAAc,CAAC,GAAG,CAAC,KAAK,CAAC,EAAE,CAAC,CAC3B,oBAAC,KAAK,IAAC,GAAG,EAAE,KAAK,CAAC,KAAK,CAAC,EAAE,EAAE,KAAK,EAAE,KAAK,EAAE,KAAK,EAAE,KAAK,GAAI,CAC3D,CAAC,CACE,CACP,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,MAAM,QAAQ,GAAG,QAAQ,CAAC,UAAU,EAAE,KAAK,EAA2B;IACpE,MAAM,EAAE,qBAAqB,EAAE,GAAG,KAAK,CAAA;IAEvC,OAAO,CACL,6BAAK,KAAK,EAAE,EAAE,OAAO,EAAE,MAAM,EAAE;QAC7B,oBAAC,SAAS,IAAC,KAAK,EAAE,KAAK,GAAI;QAC3B,oBAAC,oBAAoB,IAAC,KAAK,EAAE,KAAK,GAAI;QACtC,oBAAC,QAAQ,IAAC,KAAK,EAAE,KAAK,GAAI;QACzB,qBAAqB,CAAC,CAAC,CAAC,oBAAC,iBAAiB,IAAC,KAAK,EAAE,KAAK,GAAI,CAAC,CAAC,CAAC,IAAI,CAC/D,CACP,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,MAAM,IAAI,GAAG,QAAQ,CAAC,UAAU,EAAE,KAAK,EAA2B;IAChE,OAAO,CACL,6BAAK,KAAK,EAAE,EAAE,QAAQ,EAAE,UAAU,EAAE;QAClC,oBAAC,OAAO,IAAC,KAAK,EAAE,KAAK,GAAI;QACzB,oBAAC,SAAS,IAAC,KAAK,EAAE,KAAK,GAAI;QAC3B,oBAAC,QAAQ,IAAC,KAAK,EAAE,KAAK,GAAI,CACtB,CACP,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,MAAM,OAAO,GAAG,QAAQ,CAAC,UAAU,EAAE,KAAK,EAA2B;IACnE,MAAM,EAAE,MAAM,EAAE,eAAe,EAAE,eAAe,EAAE,WAAW,EAAE,GAAG,KAAK,CAAA;IAEvE,OAAO,CACL,iCACG,eAAe,CAAC,CAAC,CAAC,CACjB;QACE,6BAAK,KAAK,EAAE,EAAE,MAAM,EAAE,QAAQ,EAAE,QAAQ,EAAE;YACxC,oBAAC,MAAM,IAAC,KAAK,EAAE,KAAK,GAAI;YACxB,oBAAC,IAAI,IAAC,KAAK,EAAE,KAAK,GAAI,CAClB;QACN,oBAAC,sBAAsB,IAAC,KAAK,EAAE,KAAK,GAAI;QAEvC,eAAe,CAAC,CAAC,CAAC,CACjB,oBAAC,QAAQ,IAAC,QAAQ,EAAE,IAAI;YACtB,oBAAC,eAAe,OAAK,WAAW,GAAI,CAC3B,CACZ,CAAC,CAAC,CAAC,IAAI,CACP,CACJ,CAAC,CAAC,CAAC,IAAI,CACJ,CACP,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,eAAe,OAAO,CAAA"}
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|
@@ -3,66 +3,50 @@ import { observer } from 'mobx-react';
|
|
|
3
3
|
import { useDragScroll } from '../useDragScroll.js';
|
|
4
4
|
const handleBg = 'rgba(200,200,200)';
|
|
5
5
|
const handleBgHover = 'rgba(150,150,150)';
|
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6
|
-
|
|
7
|
-
|
|
6
|
+
/**
|
|
7
|
+
* A draggable divider. `getStart` is read at mousedown and handed back to
|
|
8
|
+
* `onDrag` alongside the pixel delta since, so each handle below only has to say
|
|
9
|
+
* which model dimension it resizes and where it sits.
|
|
10
|
+
*/
|
|
11
|
+
function ResizeHandle({ axis, getStart, onDrag, style, }) {
|
|
8
12
|
const [hovered, setHovered] = useState(false);
|
|
9
|
-
const { startDrag } = useDragScroll(
|
|
10
|
-
model.setTreeAreaWidth(startWidth + delta);
|
|
11
|
-
}, [model]));
|
|
13
|
+
const { startDrag } = useDragScroll(axis, onDrag);
|
|
12
14
|
return (React.createElement("div", { onMouseDown: event => {
|
|
13
|
-
startDrag(event,
|
|
15
|
+
startDrag(event, getStart());
|
|
14
16
|
}, onMouseEnter: () => {
|
|
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setHovered(true);
|
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}, onMouseLeave: () => {
|
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|
setHovered(false);
|
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}, style: {
|
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cursor: 'ew-resize',
|
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width: resizeHandleWidth,
|
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background: hovered ? handleBgHover : handleBg,
|
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position: 'relative',
|
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cursor: axis === 'x' ? 'ew-resize' : 'ns-resize',
|
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background: hovered ? handleBgHover : handleBg,
|
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+
...style,
|
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25
|
} }));
|
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+
}
|
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|
+
export const VerticalResizeHandle = observer(function ({ model, }) {
|
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28
|
+
const onDrag = useCallback((delta, startWidth) => {
|
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|
+
model.setTreeAreaWidth(startWidth + delta);
|
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}, [model]);
|
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return (React.createElement(ResizeHandle, { axis: "x", getStart: () => model.treeAreaWidth, onDrag: onDrag, style: { width: model.resizeHandleWidth } }));
|
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});
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33
|
export const HorizontalResizeHandle = observer(function ({ model, }) {
|
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const
|
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|
-
const [hovered, setHovered] = useState(false);
|
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const { startDrag } = useDragScroll('y', useCallback((delta, startHeight) => {
|
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+
const onDrag = useCallback((delta, startHeight) => {
|
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|
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}, [model])
|
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return (React.createElement("
|
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startDrag(event, model.height);
|
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}, onMouseEnter: () => {
|
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setHovered(true);
|
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}, onMouseLeave: () => {
|
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-
setHovered(false);
|
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}, style: {
|
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cursor: 'ns-resize',
|
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-
width: '100%',
|
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height: resizeHandleWidth,
|
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-
background: hovered ? handleBgHover : handleBg,
|
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position: 'relative',
|
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-
} }));
|
|
36
|
+
}, [model]);
|
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+
return (React.createElement(ResizeHandle, { axis: "y", getStart: () => model.height, onDrag: onDrag, style: { width: '100%', height: model.resizeHandleWidth } }));
|
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44
38
|
});
|
|
45
39
|
export const ConservationTrackResizeHandle = observer(function ({ model, }) {
|
|
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|
-
const
|
|
47
|
-
const [hovered, setHovered] = useState(false);
|
|
48
|
-
const { startDrag } = useDragScroll('y', useCallback((delta, startHeight) => {
|
|
40
|
+
const onDrag = useCallback((delta, startHeight) => {
|
|
49
41
|
model.setConservationTrackHeight(Math.max(10, startHeight + delta));
|
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|
-
}, [model])
|
|
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return (React.createElement(
|
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-
startDrag(event, model.conservationTrackHeight);
|
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|
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}, onMouseEnter: () => {
|
|
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|
-
setHovered(true);
|
|
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|
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}, onMouseLeave: () => {
|
|
56
|
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setHovered(false);
|
|
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|
-
}, style: {
|
|
42
|
+
}, [model]);
|
|
43
|
+
return (React.createElement(ResizeHandle, { axis: "y", getStart: () => model.conservationTrackHeight, onDrag: onDrag, style: {
|
|
58
44
|
position: 'absolute',
|
|
59
45
|
bottom: 0,
|
|
60
46
|
left: 0,
|
|
61
|
-
cursor: 'ns-resize',
|
|
62
47
|
width: '100%',
|
|
63
|
-
height: resizeHandleWidth,
|
|
48
|
+
height: model.resizeHandleWidth,
|
|
64
49
|
zIndex: 1,
|
|
65
|
-
background: hovered ? handleBgHover : handleBg,
|
|
66
50
|
} }));
|
|
67
51
|
});
|
|
68
52
|
//# sourceMappingURL=ResizeHandles.js.map
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"ResizeHandles.js","sourceRoot":"","sources":["../../src/components/ResizeHandles.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,WAAW,EAAE,QAAQ,EAAE,MAAM,OAAO,CAAA;AAEpD,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AAErC,OAAO,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAA;AAInD,MAAM,QAAQ,GAAG,mBAAmB,CAAA;AACpC,MAAM,aAAa,GAAG,mBAAmB,CAAA;AAEzC,
|
|
1
|
+
{"version":3,"file":"ResizeHandles.js","sourceRoot":"","sources":["../../src/components/ResizeHandles.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,WAAW,EAAE,QAAQ,EAAE,MAAM,OAAO,CAAA;AAEpD,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AAErC,OAAO,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAA;AAInD,MAAM,QAAQ,GAAG,mBAAmB,CAAA;AACpC,MAAM,aAAa,GAAG,mBAAmB,CAAA;AAEzC;;;;GAIG;AACH,SAAS,YAAY,CAAC,EACpB,IAAI,EACJ,QAAQ,EACR,MAAM,EACN,KAAK,GAMN;IACC,MAAM,CAAC,OAAO,EAAE,UAAU,CAAC,GAAG,QAAQ,CAAC,KAAK,CAAC,CAAA;IAC7C,MAAM,EAAE,SAAS,EAAE,GAAG,aAAa,CAAC,IAAI,EAAE,MAAM,CAAC,CAAA;IAEjD,OAAO,CACL,6BACE,WAAW,EAAE,KAAK,CAAC,EAAE;YACnB,SAAS,CAAC,KAAK,EAAE,QAAQ,EAAE,CAAC,CAAA;QAC9B,CAAC,EACD,YAAY,EAAE,GAAG,EAAE;YACjB,UAAU,CAAC,IAAI,CAAC,CAAA;QAClB,CAAC,EACD,YAAY,EAAE,GAAG,EAAE;YACjB,UAAU,CAAC,KAAK,CAAC,CAAA;QACnB,CAAC,EACD,KAAK,EAAE;YACL,QAAQ,EAAE,UAAU;YACpB,MAAM,EAAE,IAAI,KAAK,GAAG,CAAC,CAAC,CAAC,WAAW,CAAC,CAAC,CAAC,WAAW;YAChD,UAAU,EAAE,OAAO,CAAC,CAAC,CAAC,aAAa,CAAC,CAAC,CAAC,QAAQ;YAC9C,GAAG,KAAK;SACT,GACD,CACH,CAAA;AACH,CAAC;AAED,MAAM,CAAC,MAAM,oBAAoB,GAAG,QAAQ,CAAC,UAAU,EACrD,KAAK,GAGN;IACC,MAAM,MAAM,GAAG,WAAW,CACxB,CAAC,KAAa,EAAE,UAAkB,EAAE,EAAE;QACpC,KAAK,CAAC,gBAAgB,CAAC,UAAU,GAAG,KAAK,CAAC,CAAA;IAC5C,CAAC,EACD,CAAC,KAAK,CAAC,CACR,CAAA;IACD,OAAO,CACL,oBAAC,YAAY,IACX,IAAI,EAAC,GAAG,EACR,QAAQ,EAAE,GAAG,EAAE,CAAC,KAAK,CAAC,aAAa,EACnC,MAAM,EAAE,MAAM,EACd,KAAK,EAAE,EAAE,KAAK,EAAE,KAAK,CAAC,iBAAiB,EAAE,GACzC,CACH,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,MAAM,CAAC,MAAM,sBAAsB,GAAG,QAAQ,CAAC,UAAU,EACvD,KAAK,GAGN;IACC,MAAM,MAAM,GAAG,WAAW,CACxB,CAAC,KAAa,EAAE,WAAmB,EAAE,EAAE;QACrC,KAAK,CAAC,SAAS,CAAC,WAAW,GAAG,KAAK,CAAC,CAAA;IACtC,CAAC,EACD,CAAC,KAAK,CAAC,CACR,CAAA;IACD,OAAO,CACL,oBAAC,YAAY,IACX,IAAI,EAAC,GAAG,EACR,QAAQ,EAAE,GAAG,EAAE,CAAC,KAAK,CAAC,MAAM,EAC5B,MAAM,EAAE,MAAM,EACd,KAAK,EAAE,EAAE,KAAK,EAAE,MAAM,EAAE,MAAM,EAAE,KAAK,CAAC,iBAAiB,EAAE,GACzD,CACH,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,MAAM,CAAC,MAAM,6BAA6B,GAAG,QAAQ,CAAC,UAAU,EAC9D,KAAK,GAGN;IACC,MAAM,MAAM,GAAG,WAAW,CACxB,CAAC,KAAa,EAAE,WAAmB,EAAE,EAAE;QACrC,KAAK,CAAC,0BAA0B,CAAC,IAAI,CAAC,GAAG,CAAC,EAAE,EAAE,WAAW,GAAG,KAAK,CAAC,CAAC,CAAA;IACrE,CAAC,EACD,CAAC,KAAK,CAAC,CACR,CAAA;IACD,OAAO,CACL,oBAAC,YAAY,IACX,IAAI,EAAC,GAAG,EACR,QAAQ,EAAE,GAAG,EAAE,CAAC,KAAK,CAAC,uBAAuB,EAC7C,MAAM,EAAE,MAAM,EACd,KAAK,EAAE;YACL,QAAQ,EAAE,UAAU;YACpB,MAAM,EAAE,CAAC;YACT,IAAI,EAAE,CAAC;YACP,KAAK,EAAE,MAAM;YACb,MAAM,EAAE,KAAK,CAAC,iBAAiB;YAC/B,MAAM,EAAE,CAAC;SACV,GACD,CACH,CAAA;AACH,CAAC,CAAC,CAAA"}
|
|
@@ -0,0 +1,14 @@
|
|
|
1
|
+
import React from 'react';
|
|
2
|
+
export declare const scrollbarThumbFill = "rgba(66,119,127,0.3)";
|
|
3
|
+
/**
|
|
4
|
+
* The draggable thumb shared by the horizontal Minimap and the
|
|
5
|
+
* VerticalScrollbar. `getStart` is read at mousedown and handed back to
|
|
6
|
+
* `onDrag` alongside the pixel delta since, so a caller only supplies the
|
|
7
|
+
* scroll offset it drives and where the thumb sits.
|
|
8
|
+
*/
|
|
9
|
+
export default function ScrollbarThumb({ axis, getStart, onDrag, style, }: {
|
|
10
|
+
axis: 'x' | 'y';
|
|
11
|
+
getStart: () => number;
|
|
12
|
+
onDrag: (delta: number, startValue: number) => void;
|
|
13
|
+
style: React.CSSProperties;
|
|
14
|
+
}): React.JSX.Element;
|
|
@@ -0,0 +1,28 @@
|
|
|
1
|
+
import React, { useState } from 'react';
|
|
2
|
+
import { useDragScroll } from '../useDragScroll.js';
|
|
3
|
+
export const scrollbarThumbFill = 'rgba(66,119,127,0.3)';
|
|
4
|
+
const scrollbarThumbFillHovered = 'rgba(66,119,127,0.6)';
|
|
5
|
+
/**
|
|
6
|
+
* The draggable thumb shared by the horizontal Minimap and the
|
|
7
|
+
* VerticalScrollbar. `getStart` is read at mousedown and handed back to
|
|
8
|
+
* `onDrag` alongside the pixel delta since, so a caller only supplies the
|
|
9
|
+
* scroll offset it drives and where the thumb sits.
|
|
10
|
+
*/
|
|
11
|
+
export default function ScrollbarThumb({ axis, getStart, onDrag, style, }) {
|
|
12
|
+
const [hovered, setHovered] = useState(false);
|
|
13
|
+
const { startDrag } = useDragScroll(axis, onDrag);
|
|
14
|
+
return (React.createElement("div", { onMouseOver: () => {
|
|
15
|
+
setHovered(true);
|
|
16
|
+
}, onMouseOut: () => {
|
|
17
|
+
setHovered(false);
|
|
18
|
+
}, onMouseDown: event => {
|
|
19
|
+
startDrag(event, getStart());
|
|
20
|
+
}, style: {
|
|
21
|
+
position: 'absolute',
|
|
22
|
+
zIndex: 100,
|
|
23
|
+
cursor: 'pointer',
|
|
24
|
+
background: hovered ? scrollbarThumbFillHovered : scrollbarThumbFill,
|
|
25
|
+
...style,
|
|
26
|
+
} }));
|
|
27
|
+
}
|
|
28
|
+
//# sourceMappingURL=ScrollbarThumb.js.map
|
|
@@ -0,0 +1 @@
|
|
|
1
|
+
{"version":3,"file":"ScrollbarThumb.js","sourceRoot":"","sources":["../../src/components/ScrollbarThumb.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,QAAQ,EAAE,MAAM,OAAO,CAAA;AAEvC,OAAO,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAA;AAEnD,MAAM,CAAC,MAAM,kBAAkB,GAAG,sBAAsB,CAAA;AACxD,MAAM,yBAAyB,GAAG,sBAAsB,CAAA;AAExD;;;;;GAKG;AACH,MAAM,CAAC,OAAO,UAAU,cAAc,CAAC,EACrC,IAAI,EACJ,QAAQ,EACR,MAAM,EACN,KAAK,GAMN;IACC,MAAM,CAAC,OAAO,EAAE,UAAU,CAAC,GAAG,QAAQ,CAAC,KAAK,CAAC,CAAA;IAC7C,MAAM,EAAE,SAAS,EAAE,GAAG,aAAa,CAAC,IAAI,EAAE,MAAM,CAAC,CAAA;IAEjD,OAAO,CACL,6BACE,WAAW,EAAE,GAAG,EAAE;YAChB,UAAU,CAAC,IAAI,CAAC,CAAA;QAClB,CAAC,EACD,UAAU,EAAE,GAAG,EAAE;YACf,UAAU,CAAC,KAAK,CAAC,CAAA;QACnB,CAAC,EACD,WAAW,EAAE,KAAK,CAAC,EAAE;YACnB,SAAS,CAAC,KAAK,EAAE,QAAQ,EAAE,CAAC,CAAA;QAC9B,CAAC,EACD,KAAK,EAAE;YACL,QAAQ,EAAE,UAAU;YACpB,MAAM,EAAE,GAAG;YACX,MAAM,EAAE,SAAS;YACjB,UAAU,EAAE,OAAO,CAAC,CAAC,CAAC,yBAAyB,CAAC,CAAC,CAAC,kBAAkB;YACpE,GAAG,KAAK;SACT,GACD,CACH,CAAA;AACH,CAAC"}
|
|
@@ -1,9 +1,9 @@
|
|
|
1
1
|
import React, { useState } from 'react';
|
|
2
2
|
import { makeStyles } from '@jbrowse/core/util/tss-react';
|
|
3
|
-
import {
|
|
3
|
+
import { TextField } from '@mui/material';
|
|
4
4
|
import { getUngappedSequence } from 'msa-parsers';
|
|
5
|
-
import copy from '../vendor/copyToClipboard.js';
|
|
6
5
|
import Checkbox2 from './Checkbox2.js';
|
|
6
|
+
import CopyButton from './CopyButton.js';
|
|
7
7
|
const useStyles = makeStyles()({
|
|
8
8
|
textAreaFont: {
|
|
9
9
|
fontFamily: 'Courier New',
|
|
@@ -17,7 +17,6 @@ const useStyles = makeStyles()({
|
|
|
17
17
|
});
|
|
18
18
|
export default function SequenceTextArea({ str }) {
|
|
19
19
|
const { classes } = useStyles();
|
|
20
|
-
const [copied, setCopied] = useState(false);
|
|
21
20
|
const [showGaps, setShowGaps] = useState(false);
|
|
22
21
|
const [showEmpty, setShowEmpty] = useState(false);
|
|
23
22
|
const disp = str
|
|
@@ -26,13 +25,7 @@ export default function SequenceTextArea({ str }) {
|
|
|
26
25
|
.map(([s1, s2]) => `>${s1}\n${s2}`)
|
|
27
26
|
.join('\n');
|
|
28
27
|
return (React.createElement(React.Fragment, null,
|
|
29
|
-
React.createElement(
|
|
30
|
-
copy(disp);
|
|
31
|
-
setCopied(true);
|
|
32
|
-
setTimeout(() => {
|
|
33
|
-
setCopied(false);
|
|
34
|
-
}, 500);
|
|
35
|
-
} }, copied ? 'Copied!' : 'Copy to clipboard'),
|
|
28
|
+
React.createElement(CopyButton, { text: disp }),
|
|
36
29
|
React.createElement(Checkbox2, { label: "Show gaps", checked: showGaps, onChange: () => {
|
|
37
30
|
setShowGaps(!showGaps);
|
|
38
31
|
} }),
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"SequenceTextArea.js","sourceRoot":"","sources":["../../src/components/SequenceTextArea.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,QAAQ,EAAE,MAAM,OAAO,CAAA;AAEvC,OAAO,EAAE,UAAU,EAAE,MAAM,8BAA8B,CAAA;AACzD,OAAO,EAAE,
|
|
1
|
+
{"version":3,"file":"SequenceTextArea.js","sourceRoot":"","sources":["../../src/components/SequenceTextArea.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,QAAQ,EAAE,MAAM,OAAO,CAAA;AAEvC,OAAO,EAAE,UAAU,EAAE,MAAM,8BAA8B,CAAA;AACzD,OAAO,EAAE,SAAS,EAAE,MAAM,eAAe,CAAA;AACzC,OAAO,EAAE,mBAAmB,EAAE,MAAM,aAAa,CAAA;AAEjD,OAAO,SAAS,MAAM,gBAAiB,CAAA;AACvC,OAAO,UAAU,MAAM,iBAAkB,CAAA;AAEzC,MAAM,SAAS,GAAG,UAAU,EAAE,CAAC;IAC7B,YAAY,EAAE;QACZ,UAAU,EAAE,aAAa;QACzB,QAAQ,EAAE,YAAY;KACvB;IACD,aAAa,EAAE;QACb,UAAU,EAAE,WAAW;QACvB,MAAM,EAAE,CAAC;QACT,QAAQ,EAAE,MAAM;KACjB;CACF,CAAC,CAAA;AAEF,MAAM,CAAC,OAAO,UAAU,gBAAgB,CAAC,EAAE,GAAG,EAA+B;IAC3E,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAC/B,MAAM,CAAC,QAAQ,EAAE,WAAW,CAAC,GAAG,QAAQ,CAAC,KAAK,CAAC,CAAA;IAC/C,MAAM,CAAC,SAAS,EAAE,YAAY,CAAC,GAAG,QAAQ,CAAC,KAAK,CAAC,CAAA;IAEjD,MAAM,IAAI,GAAG,GAAG;SACb,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,EAAE,CAAC,EAAE,EAAE,CAAC,CAAC,EAAE,EAAE,QAAQ,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,mBAAmB,CAAC,EAAE,CAAC,CAAU,CAAC;SACzE,MAAM,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,EAAE,EAAE,CAAC,SAAS,IAAI,CAAC,CAAC,EAAE,CAAC;SACrC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,EAAE,CAAC,EAAE,EAAE,CAAC,IAAI,EAAE,KAAK,EAAE,EAAE,CAAC;SAClC,IAAI,CAAC,IAAI,CAAC,CAAA;IACb,OAAO,CACL;QACE,oBAAC,UAAU,IAAC,IAAI,EAAE,IAAI,GAAI;QAC1B,oBAAC,SAAS,IACR,KAAK,EAAC,WAAW,EACjB,OAAO,EAAE,QAAQ,EACjB,QAAQ,EAAE,GAAG,EAAE;gBACb,WAAW,CAAC,CAAC,QAAQ,CAAC,CAAA;YACxB,CAAC,GACD;QACF,oBAAC,SAAS,IACR,KAAK,EAAC,YAAY,EAClB,OAAO,EAAE,SAAS,EAClB,QAAQ,EAAE,GAAG,EAAE;gBACb,YAAY,CAAC,CAAC,SAAS,CAAC,CAAA;YAC1B,CAAC,GACD;QACF,oBAAC,SAAS,IACR,OAAO,EAAC,UAAU,EAClB,SAAS,QACT,SAAS,EAAE,OAAO,CAAC,aAAa,EAChC,OAAO,EAAE,CAAC,EACV,OAAO,EAAE,EAAE,EACX,SAAS,QACT,KAAK,EAAE,IAAI,EACX,SAAS,EAAE;gBACT,KAAK,EAAE;oBACL,QAAQ,EAAE,IAAI;oBACd,SAAS,EAAE,OAAO,CAAC,YAAY;iBAChC;aACF,GACD,CACD,CACJ,CAAA;AACH,CAAC"}
|
|
@@ -9,27 +9,32 @@ const AnnotationBlock = observer(function ({ track, model, offsetX, }) {
|
|
|
9
9
|
const { model: { customColorScheme, data }, } = track;
|
|
10
10
|
const colorScheme = customColorScheme ?? modelColorScheme;
|
|
11
11
|
const { theme, contrastScheme } = useColorContrast(colorScheme);
|
|
12
|
-
const ref = useCanvasAutorun(
|
|
13
|
-
|
|
14
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-
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32
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12
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+
const ref = useCanvasAutorun({
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13
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draw: ctx => {
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14
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+
const { bgColor, colWidth, fontSize } = model;
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ctx.resetTransform();
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ctx.scale(highResScaleFactor, highResScaleFactor);
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ctx.clearRect(0, 0, blockSize, rowHeight);
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ctx.translate(-offsetX, 0);
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ctx.textAlign = 'center';
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setFontSize(ctx, fontSize);
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+
drawTextTrackContent({
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ctx,
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data,
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colorScheme,
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contrastScheme,
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bgColor,
|
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textColor: theme.palette.text.primary,
|
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28
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+
colWidth,
|
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29
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+
rowHeight,
|
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30
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+
offsetX,
|
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31
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blockSize,
|
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32
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+
});
|
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33
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+
},
|
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34
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+
width: blockSize * highResScaleFactor,
|
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35
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+
height: rowHeight * highResScaleFactor,
|
|
36
|
+
deps: [model, offsetX, theme, contrastScheme, colorScheme, data],
|
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37
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+
});
|
|
33
38
|
return (React.createElement("canvas", { ref: ref, height: rowHeight * highResScaleFactor, width: blockSize * highResScaleFactor, style: {
|
|
34
39
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position: 'absolute',
|
|
35
40
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left: scrollX + offsetX,
|
|
@@ -1 +1 @@
|
|
|
1
|
-
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|
|
1
|
+
{"version":3,"file":"TextTrack.js","sourceRoot":"","sources":["../../src/components/TextTrack.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,OAAO,CAAA;AAEzB,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AAErC,OAAO,EAAE,WAAW,EAAE,MAAM,mBAAmB,CAAA;AAC/C,OAAO,EAAE,gBAAgB,EAAE,MAAM,wBAAwB,CAAA;AACzD,OAAO,EAAE,gBAAgB,EAAE,MAAM,wBAAwB,CAAA;AACzD,OAAO,EAAE,oBAAoB,EAAE,MAAM,6BAA6B,CAAA;AAKlE,MAAM,eAAe,GAAG,QAAQ,CAAC,UAAU,EACzC,KAAK,EACL,KAAK,EACL,OAAO,GAKR;IACC,MAAM,EACJ,SAAS,EACT,OAAO,EACP,WAAW,EAAE,gBAAgB,EAC7B,SAAS,EACT,kBAAkB,GACnB,GAAG,KAAK,CAAA;IACT,MAAM,EACJ,KAAK,EAAE,EAAE,iBAAiB,EAAE,IAAI,EAAE,GACnC,GAAG,KAAK,CAAA;IAET,MAAM,WAAW,GAAG,iBAAiB,IAAI,gBAAgB,CAAA;IACzD,MAAM,EAAE,KAAK,EAAE,cAAc,EAAE,GAAG,gBAAgB,CAAC,WAAW,CAAC,CAAA;IAC/D,MAAM,GAAG,GAAG,gBAAgB,CAAC;QAC3B,IAAI,EAAE,GAAG,CAAC,EAAE;YACV,MAAM,EAAE,OAAO,EAAE,QAAQ,EAAE,QAAQ,EAAE,GAAG,KAAK,CAAA;YAC7C,GAAG,CAAC,cAAc,EAAE,CAAA;YACpB,GAAG,CAAC,KAAK,CAAC,kBAAkB,EAAE,kBAAkB,CAAC,CAAA;YACjD,GAAG,CAAC,SAAS,CAAC,CAAC,EAAE,CAAC,EAAE,SAAS,EAAE,SAAS,CAAC,CAAA;YACzC,GAAG,CAAC,SAAS,CAAC,CAAC,OAAO,EAAE,CAAC,CAAC,CAAA;YAC1B,GAAG,CAAC,SAAS,GAAG,QAAQ,CAAA;YACxB,WAAW,CAAC,GAAG,EAAE,QAAQ,CAAC,CAAA;YAE1B,oBAAoB,CAAC;gBACnB,GAAG;gBACH,IAAI;gBACJ,WAAW;gBACX,cAAc;gBACd,OAAO;gBACP,SAAS,EAAE,KAAK,CAAC,OAAO,CAAC,IAAI,CAAC,OAAO;gBACrC,QAAQ;gBACR,SAAS;gBACT,OAAO;gBACP,SAAS;aACV,CAAC,CAAA;QACJ,CAAC;QACD,KAAK,EAAE,SAAS,GAAG,kBAAkB;QACrC,MAAM,EAAE,SAAS,GAAG,kBAAkB;QACtC,IAAI,EAAE,CAAC,KAAK,EAAE,OAAO,EAAE,KAAK,EAAE,cAAc,EAAE,WAAW,EAAE,IAAI,CAAC;KACjE,CAAC,CAAA;IACF,OAAO,CACL,gCACE,GAAG,EAAE,GAAG,EACR,MAAM,EAAE,SAAS,GAAG,kBAAkB,EACtC,KAAK,EAAE,SAAS,GAAG,kBAAkB,EACrC,KAAK,EAAE;YACL,QAAQ,EAAE,UAAU;YACpB,IAAI,EAAE,OAAO,GAAG,OAAO;YACvB,KAAK,EAAE,SAAS;YAChB,MAAM,EAAE,SAAS;SAClB,GACD,CACH,CAAA;AACH,CAAC,CAAC,CAAA;AACF,MAAM,eAAe,GAAG,QAAQ,CAAC,UAAU,EACzC,KAAK,EACL,KAAK,GAIN;IACC,MAAM,EAAE,OAAO,EAAE,YAAY,EAAE,SAAS,EAAE,GAAG,KAAK,CAAA;IAClD,IAAI,CAAC,KAAK,CAAC,KAAK,CAAC,IAAI,EAAE,CAAC;QACtB,OAAO,IAAI,CAAA;IACb,CAAC;IACD,OAAO,CACL,6BACE,KAAK,EAAE;YACL,QAAQ,EAAE,UAAU;YACpB,MAAM,EAAE,SAAS;YACjB,KAAK,EAAE,YAAY;YACnB,QAAQ,EAAE,QAAQ;SACnB,IAEA,OAAO,CAAC,GAAG,CAAC,EAAE,CAAC,EAAE,CAAC,CACjB,oBAAC,eAAe,IAAC,GAAG,EAAE,EAAE,EAAE,KAAK,EAAE,KAAK,EAAE,KAAK,EAAE,KAAK,EAAE,OAAO,EAAE,EAAE,GAAI,CACtE,CAAC,CACE,CACP,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,eAAe,eAAe,CAAA"}
|