react-msaview 5.4.1 → 5.6.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/LICENSE +21 -0
- package/bundle/index.js +487 -149
- package/bundle/index.js.map +7 -1
- package/dist/colorSchemes.js +11 -7
- package/dist/colorSchemes.js.map +1 -1
- package/dist/components/ConservationTrack.js +20 -26
- package/dist/components/ConservationTrack.js.map +1 -1
- package/dist/components/MSAViewer.d.ts +13 -1
- package/dist/components/MSAViewer.js +13 -7
- package/dist/components/MSAViewer.js.map +1 -1
- package/dist/components/SequenceTextArea.js +1 -1
- package/dist/components/SequenceTextArea.js.map +1 -1
- package/dist/components/TextTrack.js +20 -27
- package/dist/components/TextTrack.js.map +1 -1
- package/dist/components/Track.js +9 -6
- package/dist/components/Track.js.map +1 -1
- package/dist/components/dialogs/FeatureDialog.js +27 -23
- package/dist/components/dialogs/FeatureDialog.js.map +1 -1
- package/dist/components/dialogs/TrackInfoDialog.js +1 -1
- package/dist/components/dialogs/TrackInfoDialog.js.map +1 -1
- package/dist/components/header/ColorSchemeMenu.js +1 -1
- package/dist/components/header/ColorSchemeMenu.js.map +1 -1
- package/dist/components/header/FileMenu.js +1 -16
- package/dist/components/header/FileMenu.js.map +1 -1
- package/dist/components/header/Header.js +6 -5
- package/dist/components/header/Header.js.map +1 -1
- package/dist/components/header/HeaderInfoArea.js +1 -1
- package/dist/components/header/HeaderInfoArea.js.map +1 -1
- package/dist/components/header/HeaderStatusArea.js +1 -1
- package/dist/components/header/HeaderStatusArea.js.map +1 -1
- package/dist/components/header/MSASettingsMenu.js +1 -1
- package/dist/components/header/MSASettingsMenu.js.map +1 -1
- package/dist/components/header/MultiAlignmentSelector.js +0 -0
- package/dist/components/header/MultiAlignmentSelector.js.map +1 -1
- package/dist/components/header/TreeSettingsMenu.js +1 -1
- package/dist/components/header/TreeSettingsMenu.js.map +1 -1
- package/dist/components/header/ZoomControls.js +14 -12
- package/dist/components/header/ZoomControls.js.map +1 -1
- package/dist/components/header/ZoomMenu.js +1 -10
- package/dist/components/header/ZoomMenu.js.map +1 -1
- package/dist/components/header/settingsMenuItems.js +9 -1
- package/dist/components/header/settingsMenuItems.js.map +1 -1
- package/dist/components/{header/HeaderMenu.d.ts → msa/ColumnStats.d.ts} +3 -3
- package/dist/components/msa/ColumnStats.js +42 -0
- package/dist/components/msa/ColumnStats.js.map +1 -0
- package/dist/components/msa/DomainLegend.d.ts +6 -0
- package/dist/components/msa/DomainLegend.js +41 -0
- package/dist/components/msa/DomainLegend.js.map +1 -0
- package/dist/components/msa/MSACanvasBlock.js +41 -29
- package/dist/components/msa/MSACanvasBlock.js.map +1 -1
- package/dist/components/msa/MSAMouseoverCanvas.js +6 -12
- package/dist/components/msa/MSAMouseoverCanvas.js.map +1 -1
- package/dist/components/msa/MSAPanel.js +3 -1
- package/dist/components/msa/MSAPanel.js.map +1 -1
- package/dist/components/msa/renderBoxFeatureCanvasBlock.js +60 -14
- package/dist/components/msa/renderBoxFeatureCanvasBlock.js.map +1 -1
- package/dist/components/msa/renderMSABlock.js +3 -3
- package/dist/components/msa/renderMSABlock.js.map +1 -1
- package/dist/components/msa/renderMSAMouseover.js +33 -6
- package/dist/components/msa/renderMSAMouseover.js.map +1 -1
- package/dist/components/overlayColors.d.ts +3 -0
- package/dist/components/overlayColors.js +11 -0
- package/dist/components/overlayColors.js.map +1 -0
- package/dist/components/renderCtx.d.ts +1 -1
- package/dist/components/tracks/renderTracksSvg.d.ts +6 -3
- package/dist/components/tracks/renderTracksSvg.js +20 -11
- package/dist/components/tracks/renderTracksSvg.js.map +1 -1
- package/dist/components/tree/TreeCanvas.js +31 -38
- package/dist/components/tree/TreeCanvas.js.map +1 -1
- package/dist/components/tree/TreeCanvasBlock.js +12 -47
- package/dist/components/tree/TreeCanvasBlock.js.map +1 -1
- package/dist/components/tree/clickMap.d.ts +24 -0
- package/dist/components/tree/clickMap.js +33 -0
- package/dist/components/tree/clickMap.js.map +1 -0
- package/dist/components/tree/renderTreeCanvas.d.ts +1 -21
- package/dist/components/tree/renderTreeCanvas.js +8 -7
- package/dist/components/tree/renderTreeCanvas.js.map +1 -1
- package/dist/constants.d.ts +4 -0
- package/dist/constants.js +17 -0
- package/dist/constants.js.map +1 -1
- package/dist/createPaletteMap.d.ts +5 -2
- package/dist/createPaletteMap.js +15 -5
- package/dist/createPaletteMap.js.map +1 -1
- package/dist/fetchUtils.d.ts +2 -1
- package/dist/fetchUtils.js +3 -2
- package/dist/fetchUtils.js.map +1 -1
- package/dist/index.d.ts +1 -1
- package/dist/launchInterProScan.d.ts +2 -0
- package/dist/launchInterProScan.js.map +1 -1
- package/dist/model/msaModel.d.ts +25 -2
- package/dist/model/msaModel.js +15 -3
- package/dist/model/msaModel.js.map +1 -1
- package/dist/model/treeModel.d.ts +46 -5
- package/dist/model/treeModel.js +20 -7
- package/dist/model/treeModel.js.map +1 -1
- package/dist/model.d.ts +641 -133
- package/dist/model.js +191 -77
- package/dist/model.js.map +1 -1
- package/dist/propertyConservation.d.ts +7 -0
- package/dist/propertyConservation.js +66 -0
- package/dist/propertyConservation.js.map +1 -0
- package/dist/renderToSvg.js +104 -74
- package/dist/renderToSvg.js.map +1 -1
- package/dist/types.d.ts +4 -1
- package/dist/{webpack.js → umd.js} +1 -1
- package/dist/umd.js.map +1 -0
- package/dist/useCanvasAutorun.d.ts +2 -0
- package/dist/useCanvasAutorun.js +23 -0
- package/dist/useCanvasAutorun.js.map +1 -0
- package/dist/version.d.ts +1 -1
- package/dist/version.js +1 -1
- package/package.json +7 -8
- package/src/colorSchemes.docs.test.ts +55 -0
- package/src/colorSchemes.ts +12 -7
- package/src/columnStats.test.ts +94 -0
- package/src/components/ConservationTrack.tsx +17 -15
- package/src/components/MSAViewer.tsx +42 -18
- package/src/components/SequenceTextArea.tsx +1 -1
- package/src/components/TextTrack.tsx +7 -11
- package/src/components/Track.tsx +9 -6
- package/src/components/dialogs/FeatureDialog.tsx +62 -48
- package/src/components/dialogs/TrackInfoDialog.tsx +1 -1
- package/src/components/header/ColorSchemeMenu.tsx +1 -0
- package/src/components/header/FileMenu.tsx +1 -15
- package/src/components/header/Header.tsx +11 -8
- package/src/components/header/HeaderInfoArea.tsx +1 -1
- package/src/components/header/HeaderStatusArea.tsx +1 -1
- package/src/components/header/MSASettingsMenu.tsx +1 -0
- package/src/components/header/MultiAlignmentSelector.tsx +0 -0
- package/src/components/header/TreeSettingsMenu.tsx +1 -0
- package/src/components/header/ZoomControls.tsx +24 -17
- package/src/components/header/ZoomMenu.tsx +1 -10
- package/src/components/header/settingsMenuItems.ts +9 -1
- package/src/components/msa/ColumnStats.tsx +54 -0
- package/src/components/msa/DomainLegend.tsx +78 -0
- package/src/components/msa/MSACanvasBlock.tsx +46 -25
- package/src/components/msa/MSAMouseoverCanvas.tsx +10 -13
- package/src/components/msa/MSAPanel.tsx +2 -0
- package/src/components/msa/renderBoxFeatureCanvasBlock.ts +75 -17
- package/src/components/msa/renderMSABlock.ts +3 -3
- package/src/components/msa/renderMSAMouseover.ts +34 -6
- package/src/components/overlayColors.ts +12 -0
- package/src/components/renderCtx.ts +1 -0
- package/src/components/tracks/renderTracksSvg.ts +25 -11
- package/src/components/tree/TreeCanvas.tsx +47 -54
- package/src/components/tree/TreeCanvasBlock.tsx +10 -68
- package/src/components/tree/clickMap.ts +55 -0
- package/src/components/tree/renderTreeCanvas.ts +10 -34
- package/src/constants.ts +19 -0
- package/src/createPaletteMap.ts +18 -5
- package/src/fetchUtils.ts +6 -3
- package/src/index.ts +1 -1
- package/src/launchInterProScan.ts +3 -1
- package/src/model/msaModel.ts +21 -3
- package/src/model/treeModel.ts +21 -7
- package/src/model.ts +221 -119
- package/src/propertyConservation.test.ts +47 -0
- package/src/propertyConservation.ts +73 -0
- package/src/renderDomainLegendSvg.test.tsx +134 -0
- package/src/renderToSvg.tsx +210 -147
- package/src/segmentOverlay.test.ts +70 -0
- package/src/stripDefaultSnapshot.test.ts +54 -0
- package/src/types.ts +7 -1
- package/src/useCanvasAutorun.ts +28 -0
- package/src/version.ts +1 -1
- package/bundle/index.js.LICENSE.txt +0 -100
- package/dist/components/dialogs/SettingsDialog.d.ts +0 -7
- package/dist/components/dialogs/SettingsDialog.js +0 -100
- package/dist/components/dialogs/SettingsDialog.js.map +0 -1
- package/dist/components/header/HeaderMenu.js +0 -27
- package/dist/components/header/HeaderMenu.js.map +0 -1
- package/dist/components/util.d.ts +0 -1
- package/dist/components/util.js +0 -7
- package/dist/components/util.js.map +0 -1
- package/dist/webpack.js.map +0 -1
- package/src/components/dialogs/SettingsDialog.tsx +0 -234
- package/src/components/header/HeaderMenu.tsx +0 -38
- package/src/components/util.ts +0 -9
- /package/dist/{webpack.d.ts → umd.d.ts} +0 -0
- /package/src/{webpack.ts → umd.ts} +0 -0
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-
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+
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@@ -11,6 +11,7 @@ export function renderMSABlock({ model, offsetX, offsetY, contrastScheme, ctx, t
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ctx.scale(k, k);
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ctx.translate(-offsetX, rowHeight / 2 - offsetY);
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ctx.textAlign = 'center';
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ctx.textBaseline = 'alphabetic';
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setFontSize(ctx, fontSize, !bgColor);
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const { xStart, xEnd } = visibleColRange({
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const { bgColor, colorSchemeName, colorScheme, columns, colWidth, rowHeight, relativeTo, showMsaLetters, colClustalX, colConsensus, } = model;
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const isClustalX = colorSchemeName === 'clustalx_protein_dynamic';
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const isPercentIdentity = colorSchemeName === 'percent_identity_dynamic';
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if (!drawBgTiles && !showMsaLetters) {
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if (!bgColor && !showMsaLetters) {
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return;
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}
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const offsetXAligned = xStart * colWidth;
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else {
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color = colorScheme[letter];
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}
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if (
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if (bgColor) {
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ctx.fillStyle = isMatchingReference
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? theme.palette.action.hover
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: color || theme.palette.background.default;
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-
{"version":3,"file":"renderMSABlock.js","sourceRoot":"","sources":["../../../src/components/msa/renderMSABlock.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,gBAAgB,EAAE,MAAM,uBAAuB,CAAA;AACxD,OAAO,EAAE,eAAe,EAAE,MAAM,sBAAsB,CAAA;AACtD,OAAO,EAAE,WAAW,EAAE,MAAM,sBAAsB,CAAA;AAClD,OAAO,EAAE,sBAAsB,EAAE,MAAM,eAAe,CAAA;AAQtD,MAAM,UAAU,cAAc,CAAC,EAC7B,KAAK,EACL,OAAO,EACP,OAAO,EACP,cAAc,EACd,GAAG,EACH,KAAK,EACL,0BAA0B,EAC1B,kBAAkB,EAClB,kBAAkB,GAWnB;IACC,MAAM,EACJ,QAAQ,EACR,SAAS,EACT,SAAS,EACT,QAAQ,EACR,kBAAkB,EAClB,mBAAmB,EACnB,OAAO,GACR,GAAG,KAAK,CAAA;IACT,MAAM,CAAC,GAAG,0BAA0B,IAAI,kBAAkB,CAAA;IAC1D,MAAM,EAAE,GAAG,kBAAkB,IAAI,SAAS,CAAA;IAC1C,MAAM,EAAE,GAAG,kBAAkB,IAAI,SAAS,CAAA;IAC1C,GAAG,CAAC,cAAc,EAAE,CAAA;IACpB,GAAG,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,CAAC,CAAA;IACf,GAAG,CAAC,SAAS,CAAC,CAAC,OAAO,EAAE,SAAS,GAAG,CAAC,GAAG,OAAO,CAAC,CAAA;IAChD,GAAG,CAAC,SAAS,GAAG,QAAQ,CAAA;IACxB,WAAW,CAAC,GAAG,EAAE,QAAQ,EAAE,CAAC,OAAO,CAAC,CAAA;IAEpC,MAAM,EAAE,MAAM,EAAE,IAAI,EAAE,GAAG,eAAe,CAAC;QACvC,OAAO;QACP,UAAU,EAAE,EAAE;QACd,QAAQ;KACT,CAAC,CAAA;IACF,MAAM,aAAa,GAAG,gBAAgB,CAAC,EAAE,KAAK,EAAE,OAAO,EAAE,UAAU,EAAE,EAAE,EAAE,CAAC,CAAA;IAC1E,MAAM,EAAE,UAAU,EAAE,OAAO,EAAE,GAAG,KAAK,CAAA;IACrC,MAAM,YAAY,GAAG,UAAU;QAC7B,CAAC,CAAC,OAAO,CAAC,GAAG,CAAC,UAAU,CAAC,EAAE,KAAK,CAAC,MAAM,EAAE,IAAI,CAAC;QAC9C,CAAC,CAAC,IAAI,CAAA;IAER,IAAI,CAAC,mBAAmB,EAAE,CAAC;QACzB,gBAAgB,CAAC;YACf,KAAK;YACL,GAAG;YACH,KAAK;YACL,cAAc;YACd,MAAM;YACN,IAAI;YACJ,aAAa;YACb,YAAY;SACb,CAAC,CAAA;IACJ,CAAC;SAAM,CAAC;QACN,QAAQ,CAAC;YACP,KAAK;YACL,GAAG;YACH,MAAM;YACN,IAAI;YACJ,aAAa;YACb,YAAY;SACb,CAAC,CAAA;IACJ,CAAC;IACD,uBAAuB,CAAC;QACtB,KAAK;QACL,GAAG;QACH,MAAM;QACN,IAAI;QACJ,aAAa;KACd,CAAC,CAAA;IACF,GAAG,CAAC,cAAc,EAAE,CAAA;AACtB,CAAC;AAED,SAAS,gBAAgB,CAAC,EACxB,KAAK,EACL,GAAG,EACH,KAAK,EACL,cAAc,EACd,aAAa,EACb,MAAM,EACN,IAAI,EACJ,YAAY,GAUb;IACC,MAAM,EACJ,OAAO,EACP,eAAe,EACf,WAAW,EACX,OAAO,EACP,QAAQ,EACR,SAAS,EACT,UAAU,EACV,cAAc,EACd,WAAW,EACX,YAAY,GACb,GAAG,KAAK,CAAA;IAET,MAAM,UAAU,GAAG,eAAe,KAAK,0BAA0B,CAAA;IACjE,MAAM,iBAAiB,GAAG,eAAe,KAAK,0BAA0B,CAAA;IACxE,
|
|
1
|
+
{"version":3,"file":"renderMSABlock.js","sourceRoot":"","sources":["../../../src/components/msa/renderMSABlock.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,gBAAgB,EAAE,MAAM,uBAAuB,CAAA;AACxD,OAAO,EAAE,eAAe,EAAE,MAAM,sBAAsB,CAAA;AACtD,OAAO,EAAE,WAAW,EAAE,MAAM,sBAAsB,CAAA;AAClD,OAAO,EAAE,sBAAsB,EAAE,MAAM,eAAe,CAAA;AAQtD,MAAM,UAAU,cAAc,CAAC,EAC7B,KAAK,EACL,OAAO,EACP,OAAO,EACP,cAAc,EACd,GAAG,EACH,KAAK,EACL,0BAA0B,EAC1B,kBAAkB,EAClB,kBAAkB,GAWnB;IACC,MAAM,EACJ,QAAQ,EACR,SAAS,EACT,SAAS,EACT,QAAQ,EACR,kBAAkB,EAClB,mBAAmB,EACnB,OAAO,GACR,GAAG,KAAK,CAAA;IACT,MAAM,CAAC,GAAG,0BAA0B,IAAI,kBAAkB,CAAA;IAC1D,MAAM,EAAE,GAAG,kBAAkB,IAAI,SAAS,CAAA;IAC1C,MAAM,EAAE,GAAG,kBAAkB,IAAI,SAAS,CAAA;IAC1C,GAAG,CAAC,cAAc,EAAE,CAAA;IACpB,GAAG,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,CAAC,CAAA;IACf,GAAG,CAAC,SAAS,CAAC,CAAC,OAAO,EAAE,SAAS,GAAG,CAAC,GAAG,OAAO,CAAC,CAAA;IAChD,GAAG,CAAC,SAAS,GAAG,QAAQ,CAAA;IACxB,GAAG,CAAC,YAAY,GAAG,YAAY,CAAA;IAC/B,WAAW,CAAC,GAAG,EAAE,QAAQ,EAAE,CAAC,OAAO,CAAC,CAAA;IAEpC,MAAM,EAAE,MAAM,EAAE,IAAI,EAAE,GAAG,eAAe,CAAC;QACvC,OAAO;QACP,UAAU,EAAE,EAAE;QACd,QAAQ;KACT,CAAC,CAAA;IACF,MAAM,aAAa,GAAG,gBAAgB,CAAC,EAAE,KAAK,EAAE,OAAO,EAAE,UAAU,EAAE,EAAE,EAAE,CAAC,CAAA;IAC1E,MAAM,EAAE,UAAU,EAAE,OAAO,EAAE,GAAG,KAAK,CAAA;IACrC,MAAM,YAAY,GAAG,UAAU;QAC7B,CAAC,CAAC,OAAO,CAAC,GAAG,CAAC,UAAU,CAAC,EAAE,KAAK,CAAC,MAAM,EAAE,IAAI,CAAC;QAC9C,CAAC,CAAC,IAAI,CAAA;IAER,IAAI,CAAC,mBAAmB,EAAE,CAAC;QACzB,gBAAgB,CAAC;YACf,KAAK;YACL,GAAG;YACH,KAAK;YACL,cAAc;YACd,MAAM;YACN,IAAI;YACJ,aAAa;YACb,YAAY;SACb,CAAC,CAAA;IACJ,CAAC;SAAM,CAAC;QACN,QAAQ,CAAC;YACP,KAAK;YACL,GAAG;YACH,MAAM;YACN,IAAI;YACJ,aAAa;YACb,YAAY;SACb,CAAC,CAAA;IACJ,CAAC;IACD,uBAAuB,CAAC;QACtB,KAAK;QACL,GAAG;QACH,MAAM;QACN,IAAI;QACJ,aAAa;KACd,CAAC,CAAA;IACF,GAAG,CAAC,cAAc,EAAE,CAAA;AACtB,CAAC;AAED,SAAS,gBAAgB,CAAC,EACxB,KAAK,EACL,GAAG,EACH,KAAK,EACL,cAAc,EACd,aAAa,EACb,MAAM,EACN,IAAI,EACJ,YAAY,GAUb;IACC,MAAM,EACJ,OAAO,EACP,eAAe,EACf,WAAW,EACX,OAAO,EACP,QAAQ,EACR,SAAS,EACT,UAAU,EACV,cAAc,EACd,WAAW,EACX,YAAY,GACb,GAAG,KAAK,CAAA;IAET,MAAM,UAAU,GAAG,eAAe,KAAK,0BAA0B,CAAA;IACjE,MAAM,iBAAiB,GAAG,eAAe,KAAK,0BAA0B,CAAA;IACxE,IAAI,CAAC,OAAO,IAAI,CAAC,cAAc,EAAE,CAAC;QAChC,OAAM;IACR,CAAC;IACD,MAAM,cAAc,GAAG,MAAM,GAAG,QAAQ,CAAA;IACxC,MAAM,YAAY,GAAG,QAAQ,GAAG,CAAC,CAAA;IACjC,MAAM,gBAAgB,GAAG,SAAS,GAAG,CAAC,CAAA;IAEtC,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,EAAE,GAAG,aAAa,CAAC,MAAM,EAAE,CAAC,GAAG,EAAE,EAAE,CAAC,EAAE,EAAE,CAAC;QACvD,MAAM,IAAI,GAAG,aAAa,CAAC,CAAC,CAAE,CAAA;QAC9B,MAAM,EAAE,IAAI,EAAE,GAAG,IAAI,CAAC,IAAI,CAAA;QAC1B,MAAM,CAAC,GAAG,IAAI,CAAC,CAAE,CAAA;QACjB,MAAM,GAAG,GAAG,OAAO,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE,KAAK,CAAC,MAAM,EAAE,IAAI,CAAC,CAAA;QAClD,IAAI,CAAC,GAAG,EAAE,CAAC;YACT,SAAQ;QACV,CAAC;QACD,MAAM,KAAK,GAAG,CAAC,GAAG,SAAS,CAAA;QAC3B,MAAM,KAAK,GAAG,CAAC,GAAG,gBAAgB,CAAA;QAElC,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,EAAE,GAAG,GAAG,CAAC,MAAM,EAAE,CAAC,GAAG,EAAE,EAAE,CAAC,EAAE,EAAE,CAAC;YAC7C,MAAM,MAAM,GAAG,GAAG,CAAC,CAAC,CAAE,CAAA;YACtB,MAAM,CAAC,GAAG,CAAC,GAAG,QAAQ,GAAG,cAAc,CAAA;YACvC,MAAM,mBAAmB,GACvB,YAAY,IAAI,IAAI,KAAK,UAAU,IAAI,MAAM,KAAK,YAAY,CAAC,CAAC,CAAC,CAAA;YAEnE,IAAI,KAAyB,CAAA;YAC7B,IAAI,UAAU,EAAE,CAAC;gBACf,KAAK,GAAG,WAAW,CAAC,MAAM,GAAG,CAAC,CAAE,CAAC,MAAM,CAAC,CAAA;YAC1C,CAAC;iBAAM,IAAI,iBAAiB,EAAE,CAAC;gBAC7B,MAAM,SAAS,GAAG,YAAY,CAAC,MAAM,GAAG,CAAC,CAAE,CAAA;gBAC3C,KAAK,GAAG,MAAM,KAAK,SAAS,CAAC,MAAM,CAAC,CAAC,CAAC,SAAS,CAAC,KAAK,CAAC,CAAC,CAAC,SAAS,CAAA;YACnE,CAAC;iBAAM,CAAC;gBACN,KAAK,GAAG,WAAW,CAAC,MAAM,CAAC,CAAA;YAC7B,CAAC;YAED,IAAI,OAAO,EAAE,CAAC;gBACZ,GAAG,CAAC,SAAS,GAAG,mBAAmB;oBACjC,CAAC,CAAC,KAAK,CAAC,OAAO,CAAC,MAAM,CAAC,KAAK;oBAC5B,CAAC,CAAC,KAAK,IAAI,KAAK,CAAC,OAAO,CAAC,UAAU,CAAC,OAAO,CAAA;gBAC7C,GAAG,CAAC,QAAQ,CAAC,CAAC,EAAE,KAAK,EAAE,QAAQ,EAAE,SAAS,CAAC,CAAA;YAC7C,CAAC;YAED,IAAI,cAAc,EAAE,CAAC;gBACnB,GAAG,CAAC,SAAS,GAAG,OAAO;oBACrB,CAAC,CAAC,CAAC,cAAc,CAAC,MAAM,CAAC,IAAI,OAAO,CAAC;oBACrC,CAAC,CAAC,KAAK;wBACL,CAAC,CAAC,sBAAsB,CAAC,KAAK,EAAE,KAAK,CAAC,OAAO,CAAC,UAAU,CAAC,OAAO,CAAC;wBACjE,CAAC,CAAC,KAAK,CAAC,OAAO,CAAC,IAAI,CAAC,OAAO,CAAA;gBAChC,GAAG,CAAC,QAAQ,CACV,mBAAmB,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,MAAM,EAClC,CAAC,GAAG,YAAY,EAChB,KAAK,CACN,CAAA;YACH,CAAC;QACH,CAAC;IACH,CAAC;AACH,CAAC;AAED,qFAAqF;AACrF,qCAAqC;AACrC,SAAS,QAAQ,CAAC,EAChB,KAAK,EACL,GAAG,EACH,aAAa,EACb,MAAM,EACN,IAAI,EACJ,YAAY,GAQb;IACC,MAAM,EAAE,cAAc,EAAE,OAAO,EAAE,QAAQ,EAAE,SAAS,EAAE,UAAU,EAAE,GAAG,KAAK,CAAA;IAE1E,IAAI,CAAC,cAAc,EAAE,CAAC;QACpB,OAAM;IACR,CAAC;IACD,MAAM,cAAc,GAAG,MAAM,GAAG,QAAQ,CAAA;IACxC,MAAM,YAAY,GAAG,QAAQ,GAAG,CAAC,CAAA;IACjC,MAAM,gBAAgB,GAAG,SAAS,GAAG,CAAC,CAAA;IACtC,kDAAkD;IAClD,GAAG,CAAC,SAAS,GAAG,OAAO,CAAA;IAEvB,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,EAAE,GAAG,aAAa,CAAC,MAAM,EAAE,CAAC,GAAG,EAAE,EAAE,CAAC,EAAE,EAAE,CAAC;QACvD,MAAM,IAAI,GAAG,aAAa,CAAC,CAAC,CAAE,CAAA;QAC9B,MAAM,EAAE,IAAI,EAAE,GAAG,IAAI,CAAC,IAAI,CAAA;QAC1B,MAAM,CAAC,GAAG,IAAI,CAAC,CAAE,GAAG,gBAAgB,CAAA;QACpC,MAAM,GAAG,GAAG,OAAO,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE,KAAK,CAAC,MAAM,EAAE,IAAI,CAAC,CAAA;QAClD,IAAI,CAAC,GAAG,EAAE,CAAC;YACT,SAAQ;QACV,CAAC;QACD,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,EAAE,GAAG,GAAG,CAAC,MAAM,EAAE,CAAC,GAAG,EAAE,EAAE,CAAC,EAAE,EAAE,CAAC;YAC7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|
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@@ -1,7 +1,28 @@
|
|
|
1
|
+
import { multiRowHoverColor, referenceColor } from "../overlayColors.js";
|
|
1
2
|
const hoverColor = 'rgba(0,0,0,0.15)';
|
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2
3
|
const highlightColor = 'rgba(128,128,0,0.2)';
|
|
3
|
-
|
|
4
|
-
|
|
4
|
+
// the persistent highlightColumns overlay: a stronger fill plus a solid border
|
|
5
|
+
// so a domain/motif band reads clearly over the colored alignment cells (the
|
|
6
|
+
// faint hover-style wash alone is invisible against clustalx coloring)
|
|
7
|
+
const highlightColumnsFill = 'rgba(255,140,0,0.28)';
|
|
8
|
+
const highlightColumnsBorder = 'rgba(210,90,0,0.95)';
|
|
9
|
+
// Collapse sorted column indices into contiguous [start,end] runs so a run of
|
|
10
|
+
// highlighted columns draws as one bordered band rather than per-column slices
|
|
11
|
+
// (which would draw internal borders).
|
|
12
|
+
function contiguousRuns(columns) {
|
|
13
|
+
const sorted = [...columns].sort((a, b) => a - b);
|
|
14
|
+
const runs = [];
|
|
15
|
+
for (const col of sorted) {
|
|
16
|
+
const last = runs.at(-1);
|
|
17
|
+
if (last && col === last.end + 1) {
|
|
18
|
+
last.end = col;
|
|
19
|
+
}
|
|
20
|
+
else {
|
|
21
|
+
runs.push({ start: col, end: col });
|
|
22
|
+
}
|
|
23
|
+
}
|
|
24
|
+
return runs;
|
|
25
|
+
}
|
|
5
26
|
export function renderMouseover({ ctx, model, }) {
|
|
6
27
|
const { mouseCol, colWidth, msaAreaWidth, verticalScrollbarWidth, height, rowHeight, scrollX, scrollY, mouseRow, mouseClickRow, mouseClickCol, relativeTo, hoveredTreeNode, highlightedColumns, highResScaleFactor, } = model;
|
|
7
28
|
const width = msaAreaWidth - verticalScrollbarWidth;
|
|
@@ -26,11 +47,17 @@ export function renderMouseover({ ctx, model, }) {
|
|
|
26
47
|
}
|
|
27
48
|
}
|
|
28
49
|
}
|
|
29
|
-
// Highlight multiple columns
|
|
50
|
+
// Highlight multiple columns — draw each contiguous run as a filled, bordered
|
|
51
|
+
// band so a domain/motif highlight is clearly visible over the alignment
|
|
30
52
|
if (highlightedColumns?.length) {
|
|
31
|
-
ctx.
|
|
32
|
-
for (const
|
|
33
|
-
|
|
53
|
+
ctx.lineWidth = 2;
|
|
54
|
+
for (const { start, end } of contiguousRuns(highlightedColumns)) {
|
|
55
|
+
const x = start * colWidth + scrollX;
|
|
56
|
+
const w = (end - start + 1) * colWidth;
|
|
57
|
+
ctx.fillStyle = highlightColumnsFill;
|
|
58
|
+
ctx.fillRect(x, 0, w, height);
|
|
59
|
+
ctx.strokeStyle = highlightColumnsBorder;
|
|
60
|
+
ctx.strokeRect(x, 0, w, height);
|
|
34
61
|
}
|
|
35
62
|
}
|
|
36
63
|
if (mouseCol !== undefined) {
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"renderMSAMouseover.js","sourceRoot":"","sources":["../../../src/components/msa/renderMSAMouseover.ts"],"names":[],"mappings":"
|
|
1
|
+
{"version":3,"file":"renderMSAMouseover.js","sourceRoot":"","sources":["../../../src/components/msa/renderMSAMouseover.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,kBAAkB,EAAE,cAAc,EAAE,MAAM,qBAAqB,CAAA;AAIxE,MAAM,UAAU,GAAG,kBAAkB,CAAA;AACrC,MAAM,cAAc,GAAG,qBAAqB,CAAA;AAC5C,+EAA+E;AAC/E,6EAA6E;AAC7E,uEAAuE;AACvE,MAAM,oBAAoB,GAAG,sBAAsB,CAAA;AACnD,MAAM,sBAAsB,GAAG,qBAAqB,CAAA;AAEpD,8EAA8E;AAC9E,+EAA+E;AAC/E,uCAAuC;AACvC,SAAS,cAAc,CAAC,OAAiB;IACvC,MAAM,MAAM,GAAG,CAAC,GAAG,OAAO,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,EAAE,EAAE,CAAC,CAAC,GAAG,CAAC,CAAC,CAAA;IACjD,MAAM,IAAI,GAAqC,EAAE,CAAA;IACjD,KAAK,MAAM,GAAG,IAAI,MAAM,EAAE,CAAC;QACzB,MAAM,IAAI,GAAG,IAAI,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,CAAA;QACxB,IAAI,IAAI,IAAI,GAAG,KAAK,IAAI,CAAC,GAAG,GAAG,CAAC,EAAE,CAAC;YACjC,IAAI,CAAC,GAAG,GAAG,GAAG,CAAA;QAChB,CAAC;aAAM,CAAC;YACN,IAAI,CAAC,IAAI,CAAC,EAAE,KAAK,EAAE,GAAG,EAAE,GAAG,EAAE,GAAG,EAAE,CAAC,CAAA;QACrC,CAAC;IACH,CAAC;IACD,OAAO,IAAI,CAAA;AACb,CAAC;AAED,MAAM,UAAU,eAAe,CAAC,EAC9B,GAAG,EACH,KAAK,GAIN;IACC,MAAM,EACJ,QAAQ,EACR,QAAQ,EACR,YAAY,EACZ,sBAAsB,EACtB,MAAM,EACN,SAAS,EACT,OAAO,EACP,OAAO,EACP,QAAQ,EACR,aAAa,EACb,aAAa,EACb,UAAU,EACV,eAAe,EACf,kBAAkB,EAClB,kBAAkB,GACnB,GAAG,KAAK,CAAA;IACT,MAAM,KAAK,GAAG,YAAY,GAAG,sBAAsB,CAAA;IACnD,GAAG,CAAC,cAAc,EAAE,CAAA;IACpB,GAAG,CAAC,SAAS,CAAC,CAAC,EAAE,CAAC,EAAE,KAAK,GAAG,kBAAkB,EAAE,MAAM,GAAG,kBAAkB,CAAC,CAAA;IAC5E,GAAG,CAAC,KAAK,CAAC,kBAAkB,EAAE,kBAAkB,CAAC,CAAA;IAEjD,oDAAoD;IACpD,IAAI,UAAU,EAAE,CAAC;QACf,MAAM,iBAAiB,GAAG,KAAK,CAAC,WAAW,CAAC,GAAG,CAAC,UAAU,CAAC,CAAA;QAC3D,IAAI,iBAAiB,KAAK,SAAS,EAAE,CAAC;YACpC,GAAG,CAAC,SAAS,GAAG,cAAc,CAAA;YAC9B,GAAG,CAAC,QAAQ,CAAC,CAAC,EAAE,iBAAiB,GAAG,SAAS,GAAG,OAAO,EAAE,KAAK,EAAE,SAAS,CAAC,CAAA;QAC5E,CAAC;IACH,CAAC;IAED,sEAAsE;IACtE,IAAI,eAAe,EAAE,CAAC;QACpB,GAAG,CAAC,SAAS,GAAG,kBAAkB,CAAA;QAClC,KAAK,MAAM,cAAc,IAAI,eAAe,CAAC,eAAe,EAAE,CAAC;YAC7D,MAAM,QAAQ,GAAG,KAAK,CAAC,WAAW,CAAC,GAAG,CAAC,cAAc,CAAC,CAAA;YACtD,IAAI,QAAQ,KAAK,SAAS,EAAE,CAAC;gBAC3B,GAAG,CAAC,QAAQ,CAAC,CAAC,EAAE,QAAQ,GAAG,SAAS,GAAG,OAAO,EAAE,KAAK,EAAE,SAAS,CAAC,CAAA;YACnE,CAAC;QACH,CAAC;IACH,CAAC;IAED,8EAA8E;IAC9E,yEAAyE;IACzE,IAAI,kBAAkB,EAAE,MAAM,EAAE,CAAC;QAC/B,GAAG,CAAC,SAAS,GAAG,CAAC,CAAA;QACjB,KAAK,MAAM,EAAE,KAAK,EAAE,GAAG,EAAE,IAAI,cAAc,CAAC,kBAAkB,CAAC,EAAE,CAAC;YAChE,MAAM,CAAC,GAAG,KAAK,GAAG,QAAQ,GAAG,OAAO,CAAA;YACpC,MAAM,CAAC,GAAG,CAAC,GAAG,GAAG,KAAK,GAAG,CAAC,CAAC,GAAG,QAAQ,CAAA;YACtC,GAAG,CAAC,SAAS,GAAG,oBAAoB,CAAA;YACpC,GAAG,CAAC,QAAQ,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,MAAM,CAAC,CAAA;YAC7B,GAAG,CAAC,WAAW,GAAG,sBAAsB,CAAA;YACxC,GAAG,CAAC,UAAU,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,MAAM,CAAC,CAAA;QACjC,CAAC;IACH,CAAC;IAED,IAAI,QAAQ,KAAK,SAAS,EAAE,CAAC;QAC3B,GAAG,CAAC,SAAS,GAAG,UAAU,CAAA;QAC1B,GAAG,CAAC,QAAQ,CAAC,QAAQ,GAAG,QAAQ,GAAG,OAAO,EAAE,CAAC,EAAE,QAAQ,EAAE,MAAM,CAAC,CAAA;IAClE,CAAC;IACD,IAAI,QAAQ,KAAK,SAAS,EAAE,CAAC;QAC3B,GAAG,CAAC,SAAS,GAAG,UAAU,CAAA;QAC1B,GAAG,CAAC,QAAQ,CAAC,CAAC,EAAE,QAAQ,GAAG,SAAS,GAAG,OAAO,EAAE,KAAK,EAAE,SAAS,CAAC,CAAA;IACnE,CAAC;IACD,IAAI,aAAa,KAAK,SAAS,EAAE,CAAC;QAChC,GAAG,CAAC,SAAS,GAAG,cAAc,CAAA;QAC9B,GAAG,CAAC,QAAQ,CAAC,aAAa,GAAG,QAAQ,GAAG,OAAO,EAAE,CAAC,EAAE,QAAQ,EAAE,MAAM,CAAC,CAAA;IACvE,CAAC;IACD,IAAI,aAAa,KAAK,SAAS,EAAE,CAAC;QAChC,GAAG,CAAC,SAAS,GAAG,cAAc,CAAA;QAC9B,GAAG,CAAC,QAAQ,CAAC,CAAC,EAAE,aAAa,GAAG,SAAS,GAAG,OAAO,EAAE,KAAK,EAAE,SAAS,CAAC,CAAA;IACxE,CAAC;AACH,CAAC"}
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@@ -0,0 +1,11 @@
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1
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+
// Shared highlight colors for the MSA/tree hover and selection overlay canvases.
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2
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+
// Kept in one place so the reference-row color (drawn identically over both the
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3
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+
// tree and the alignment) can't drift between the two surfaces.
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4
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+
// reference (relativeTo) row, drawn over both the tree and the alignment
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5
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+
export const referenceColor = 'rgba(0,128,255,0.3)';
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6
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+
// tree-node descendant rows highlighted on hover. The alpha differs by surface
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7
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+
// intentionally: the tree background is plain so it can take a stronger wash,
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8
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+
// while the alignment cells are already colored so a lighter wash reads better.
|
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9
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+
export const treeHoverColor = 'rgba(255,165,0,0.2)';
|
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10
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+
export const multiRowHoverColor = 'rgba(255,165,0,0.15)';
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+
//# sourceMappingURL=overlayColors.js.map
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@@ -0,0 +1 @@
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1
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+
{"version":3,"file":"overlayColors.js","sourceRoot":"","sources":["../../src/components/overlayColors.ts"],"names":[],"mappings":"AAAA,iFAAiF;AACjF,gFAAgF;AAChF,gEAAgE;AAEhE,yEAAyE;AACzE,MAAM,CAAC,MAAM,cAAc,GAAG,qBAAqB,CAAA;AAEnD,+EAA+E;AAC/E,8EAA8E;AAC9E,gFAAgF;AAChF,MAAM,CAAC,MAAM,cAAc,GAAG,qBAAqB,CAAA;AACnD,MAAM,CAAC,MAAM,kBAAkB,GAAG,sBAAsB,CAAA"}
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@@ -4,4 +4,4 @@
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4
4
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* SVG export) satisfy this, so renderers can be typed against it without an
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5
5
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* `as any` cast at the SVG-export boundary.
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6
6
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*/
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7
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-
export type RenderCtx = Pick<CanvasRenderingContext2D, 'arc' | 'beginPath' | 'clearRect' | 'closePath' | 'fill' | 'fillRect' | 'fillStyle' | 'fillText' | 'font' | 'lineTo' | 'lineWidth' | 'measureText' | 'moveTo' | 'resetTransform' | 'scale' | 'setLineDash' | 'stroke' | 'strokeRect' | 'strokeStyle' | 'textAlign' | 'translate'>;
|
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7
|
+
export type RenderCtx = Pick<CanvasRenderingContext2D, 'arc' | 'beginPath' | 'clearRect' | 'closePath' | 'fill' | 'fillRect' | 'fillStyle' | 'fillText' | 'font' | 'lineTo' | 'lineWidth' | 'measureText' | 'moveTo' | 'resetTransform' | 'scale' | 'setLineDash' | 'stroke' | 'strokeRect' | 'strokeStyle' | 'textAlign' | 'textBaseline' | 'translate'>;
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@@ -1,14 +1,16 @@
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1
1
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import type { MsaViewModel } from '../../model.ts';
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2
2
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import type { BasicTrack } from '../../types.ts';
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3
3
|
import type { RenderCtx } from '../renderCtx.ts';
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4
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-
export declare function drawConservationBars({ ctx,
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4
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+
export declare function drawConservationBars({ ctx, values, color, colWidth, trackHeight, offsetX, blockSize, }: {
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5
5
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ctx: RenderCtx;
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6
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-
|
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6
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+
values: number[];
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7
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+
color: string;
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7
8
|
colWidth: number;
|
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8
9
|
trackHeight: number;
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9
10
|
offsetX: number;
|
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10
11
|
blockSize: number;
|
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11
12
|
}): void;
|
|
13
|
+
export declare function barTrackValues(model: MsaViewModel, trackId: string): number[];
|
|
12
14
|
export declare function drawTextTrackContent({ ctx, data, colorScheme, contrastScheme, bgColor, colWidth, rowHeight, offsetX, blockSize, }: {
|
|
13
15
|
ctx: RenderCtx;
|
|
14
16
|
data: string | undefined;
|
|
@@ -20,9 +22,10 @@ export declare function drawTextTrackContent({ ctx, data, colorScheme, contrastS
|
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20
22
|
offsetX: number;
|
|
21
23
|
blockSize: number;
|
|
22
24
|
}): void;
|
|
23
|
-
export declare function renderConservationTrack({ model, ctx, offsetX, offsetY, trackHeight, blockSizeXOverride, highResScaleFactorOverride, }: {
|
|
25
|
+
export declare function renderConservationTrack({ model, ctx, track, offsetX, offsetY, trackHeight, blockSizeXOverride, highResScaleFactorOverride, }: {
|
|
24
26
|
model: MsaViewModel;
|
|
25
27
|
ctx: RenderCtx;
|
|
28
|
+
track: BasicTrack;
|
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26
29
|
offsetX: number;
|
|
27
30
|
offsetY: number;
|
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28
31
|
trackHeight: number;
|
|
@@ -1,19 +1,26 @@
|
|
|
1
1
|
import { setFontSize } from "../../setFontSize.js";
|
|
2
2
|
import { visibleColRange } from "../msa/visibleColRange.js";
|
|
3
|
-
export function drawConservationBars({ ctx,
|
|
3
|
+
export function drawConservationBars({ ctx, values, color, colWidth, trackHeight, offsetX, blockSize, }) {
|
|
4
4
|
const { xStart, xEnd } = visibleColRange({
|
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5
5
|
offsetX,
|
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6
6
|
blockWidth: blockSize,
|
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7
7
|
colWidth,
|
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8
8
|
});
|
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9
|
-
ctx.fillStyle =
|
|
10
|
-
for (let i = xStart; i < xEnd && i <
|
|
11
|
-
const value =
|
|
9
|
+
ctx.fillStyle = color;
|
|
10
|
+
for (let i = xStart; i < xEnd && i < values.length; i++) {
|
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11
|
+
const value = values[i];
|
|
12
12
|
const barHeight = value * trackHeight;
|
|
13
13
|
const x = i * colWidth;
|
|
14
14
|
ctx.fillRect(x, trackHeight - barHeight, colWidth, barHeight);
|
|
15
15
|
}
|
|
16
16
|
}
|
|
17
|
+
// the bar-track values live on model getters (kept off the plain track object so
|
|
18
|
+
// the live canvas autorun stays reactive); select the right one by track id
|
|
19
|
+
export function barTrackValues(model, trackId) {
|
|
20
|
+
return trackId === 'property-conservation'
|
|
21
|
+
? model.propertyConservation
|
|
22
|
+
: model.conservation;
|
|
23
|
+
}
|
|
17
24
|
export function drawTextTrackContent({ ctx, data, colorScheme, contrastScheme, bgColor, colWidth, rowHeight, offsetX, blockSize, }) {
|
|
18
25
|
const { xStart, xEnd } = visibleColRange({
|
|
19
26
|
offsetX,
|
|
@@ -23,20 +30,20 @@ export function drawTextTrackContent({ ctx, data, colorScheme, contrastScheme, b
|
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|
23
30
|
const str = data?.slice(xStart, xEnd);
|
|
24
31
|
for (let i = 0; str && i < str.length; i++) {
|
|
25
32
|
const letter = str[i];
|
|
26
|
-
const
|
|
33
|
+
const upper = letter.toUpperCase();
|
|
27
34
|
if (bgColor) {
|
|
28
35
|
const x = (xStart + i) * colWidth;
|
|
29
|
-
ctx.fillStyle =
|
|
36
|
+
ctx.fillStyle = colorScheme[upper] || 'white';
|
|
30
37
|
ctx.fillRect(x, 0, colWidth, rowHeight);
|
|
31
38
|
if (rowHeight >= 10 && colWidth >= rowHeight / 2) {
|
|
32
|
-
ctx.fillStyle = contrastScheme[
|
|
39
|
+
ctx.fillStyle = contrastScheme[upper] || 'black';
|
|
33
40
|
ctx.fillText(letter, x + colWidth / 2, rowHeight / 2 + 1);
|
|
34
41
|
}
|
|
35
42
|
}
|
|
36
43
|
}
|
|
37
44
|
}
|
|
38
|
-
export function renderConservationTrack({ model, ctx, offsetX, offsetY, trackHeight, blockSizeXOverride, highResScaleFactorOverride, }) {
|
|
39
|
-
const { blockSize, colWidth, highResScaleFactor
|
|
45
|
+
export function renderConservationTrack({ model, ctx, track, offsetX, offsetY, trackHeight, blockSizeXOverride, highResScaleFactorOverride, }) {
|
|
46
|
+
const { blockSize, colWidth, highResScaleFactor } = model;
|
|
40
47
|
const bx = blockSizeXOverride ?? blockSize;
|
|
41
48
|
const k = highResScaleFactorOverride ?? highResScaleFactor;
|
|
42
49
|
ctx.resetTransform();
|
|
@@ -44,7 +51,8 @@ export function renderConservationTrack({ model, ctx, offsetX, offsetY, trackHei
|
|
|
44
51
|
ctx.translate(-offsetX, offsetY);
|
|
45
52
|
drawConservationBars({
|
|
46
53
|
ctx,
|
|
47
|
-
|
|
54
|
+
values: barTrackValues(model, track.model.id),
|
|
55
|
+
color: track.model.barColor ?? 'gray',
|
|
48
56
|
colWidth,
|
|
49
57
|
trackHeight,
|
|
50
58
|
offsetX,
|
|
@@ -81,10 +89,11 @@ export function renderAllTracks({ model, ctx, offsetX, contrastScheme, blockSize
|
|
|
81
89
|
let currentY = 0;
|
|
82
90
|
for (const track of turnedOnTracks) {
|
|
83
91
|
const trackHeight = track.model.height;
|
|
84
|
-
if (track.model.
|
|
92
|
+
if (track.model.barColor !== undefined) {
|
|
85
93
|
renderConservationTrack({
|
|
86
94
|
model,
|
|
87
95
|
ctx,
|
|
96
|
+
track,
|
|
88
97
|
offsetX,
|
|
89
98
|
offsetY: currentY,
|
|
90
99
|
trackHeight,
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"renderTracksSvg.js","sourceRoot":"","sources":["../../../src/components/tracks/renderTracksSvg.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,WAAW,EAAE,MAAM,sBAAsB,CAAA;AAClD,OAAO,EAAE,eAAe,EAAE,MAAM,2BAA2B,CAAA;AAM3D,MAAM,UAAU,oBAAoB,CAAC,EACnC,GAAG,EACH,
|
|
1
|
+
{"version":3,"file":"renderTracksSvg.js","sourceRoot":"","sources":["../../../src/components/tracks/renderTracksSvg.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,WAAW,EAAE,MAAM,sBAAsB,CAAA;AAClD,OAAO,EAAE,eAAe,EAAE,MAAM,2BAA2B,CAAA;AAM3D,MAAM,UAAU,oBAAoB,CAAC,EACnC,GAAG,EACH,MAAM,EACN,KAAK,EACL,QAAQ,EACR,WAAW,EACX,OAAO,EACP,SAAS,GASV;IACC,MAAM,EAAE,MAAM,EAAE,IAAI,EAAE,GAAG,eAAe,CAAC;QACvC,OAAO;QACP,UAAU,EAAE,SAAS;QACrB,QAAQ;KACT,CAAC,CAAA;IAEF,GAAG,CAAC,SAAS,GAAG,KAAK,CAAA;IACrB,KAAK,IAAI,CAAC,GAAG,MAAM,EAAE,CAAC,GAAG,IAAI,IAAI,CAAC,GAAG,MAAM,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE,CAAC;QACxD,MAAM,KAAK,GAAG,MAAM,CAAC,CAAC,CAAE,CAAA;QACxB,MAAM,SAAS,GAAG,KAAK,GAAG,WAAW,CAAA;QACrC,MAAM,CAAC,GAAG,CAAC,GAAG,QAAQ,CAAA;QACtB,GAAG,CAAC,QAAQ,CAAC,CAAC,EAAE,WAAW,GAAG,SAAS,EAAE,QAAQ,EAAE,SAAS,CAAC,CAAA;IAC/D,CAAC;AACH,CAAC;AAED,iFAAiF;AACjF,4EAA4E;AAC5E,MAAM,UAAU,cAAc,CAAC,KAAmB,EAAE,OAAe;IACjE,OAAO,OAAO,KAAK,uBAAuB;QACxC,CAAC,CAAC,KAAK,CAAC,oBAAoB;QAC5B,CAAC,CAAC,KAAK,CAAC,YAAY,CAAA;AACxB,CAAC;AAED,MAAM,UAAU,oBAAoB,CAAC,EACnC,GAAG,EACH,IAAI,EACJ,WAAW,EACX,cAAc,EACd,OAAO,EACP,QAAQ,EACR,SAAS,EACT,OAAO,EACP,SAAS,GAWV;IACC,MAAM,EAAE,MAAM,EAAE,IAAI,EAAE,GAAG,eAAe,CAAC;QACvC,OAAO;QACP,UAAU,EAAE,SAAS;QACrB,QAAQ;KACT,CAAC,CAAA;IACF,MAAM,GAAG,GAAG,IAAI,EAAE,KAAK,CAAC,MAAM,EAAE,IAAI,CAAC,CAAA;IAErC,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,GAAG,IAAI,CAAC,GAAG,GAAG,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE,CAAC;QAC3C,MAAM,MAAM,GAAG,GAAG,CAAC,CAAC,CAAE,CAAA;QACtB,MAAM,KAAK,GAAG,MAAM,CAAC,WAAW,EAAE,CAAA;QAClC,IAAI,OAAO,EAAE,CAAC;YACZ,MAAM,CAAC,GAAG,CAAC,MAAM,GAAG,CAAC,CAAC,GAAG,QAAQ,CAAA;YACjC,GAAG,CAAC,SAAS,GAAG,WAAW,CAAC,KAAK,CAAC,IAAI,OAAO,CAAA;YAC7C,GAAG,CAAC,QAAQ,CAAC,CAAC,EAAE,CAAC,EAAE,QAAQ,EAAE,SAAS,CAAC,CAAA;YACvC,IAAI,SAAS,IAAI,EAAE,IAAI,QAAQ,IAAI,SAAS,GAAG,CAAC,EAAE,CAAC;gBACjD,GAAG,CAAC,SAAS,GAAG,cAAc,CAAC,KAAK,CAAC,IAAI,OAAO,CAAA;gBAChD,GAAG,CAAC,QAAQ,CAAC,MAAM,EAAE,CAAC,GAAG,QAAQ,GAAG,CAAC,EAAE,SAAS,GAAG,CAAC,GAAG,CAAC,CAAC,CAAA;YAC3D,CAAC;QACH,CAAC;IACH,CAAC;AACH,CAAC;AAED,MAAM,UAAU,uBAAuB,CAAC,EACtC,KAAK,EACL,GAAG,EACH,KAAK,EACL,OAAO,EACP,OAAO,EACP,WAAW,EACX,kBAAkB,EAClB,0BAA0B,GAU3B;IACC,MAAM,EAAE,SAAS,EAAE,QAAQ,EAAE,kBAAkB,EAAE,GAAG,KAAK,CAAA;IACzD,MAAM,EAAE,GAAG,kBAAkB,IAAI,SAAS,CAAA;IAC1C,MAAM,CAAC,GAAG,0BAA0B,IAAI,kBAAkB,CAAA;IAE1D,GAAG,CAAC,cAAc,EAAE,CAAA;IACpB,GAAG,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,CAAC,CAAA;IACf,GAAG,CAAC,SAAS,CAAC,CAAC,OAAO,EAAE,OAAO,CAAC,CAAA;IAEhC,oBAAoB,CAAC;QACnB,GAAG;QACH,MAAM,EAAE,cAAc,CAAC,KAAK,EAAE,KAAK,CAAC,KAAK,CAAC,EAAE,CAAC;QAC7C,KAAK,EAAE,KAAK,CAAC,KAAK,CAAC,QAAQ,IAAI,MAAM;QACrC,QAAQ;QACR,WAAW;QACX,OAAO;QACP,SAAS,EAAE,EAAE;KACd,CAAC,CAAA;IAEF,GAAG,CAAC,cAAc,EAAE,CAAA;AACtB,CAAC;AAED,MAAM,UAAU,eAAe,CAAC,EAC9B,KAAK,EACL,GAAG,EACH,KAAK,EACL,OAAO,EACP,OAAO,EACP,cAAc,EACd,kBAAkB,EAClB,0BAA0B,GAU3B;IACC,MAAM,EACJ,SAAS,EACT,OAAO,EACP,WAAW,EAAE,gBAAgB,EAC7B,QAAQ,EACR,QAAQ,EACR,SAAS,EACT,kBAAkB,GACnB,GAAG,KAAK,CAAA;IAET,MAAM,EAAE,iBAAiB,EAAE,IAAI,EAAE,GAAG,KAAK,CAAC,KAAK,CAAA;IAC/C,MAAM,WAAW,GAAG,iBAAiB,IAAI,gBAAgB,CAAA;IACzD,MAAM,EAAE,GAAG,kBAAkB,IAAI,SAAS,CAAA;IAC1C,MAAM,CAAC,GAAG,0BAA0B,IAAI,kBAAkB,CAAA;IAE1D,GAAG,CAAC,cAAc,EAAE,CAAA;IACpB,GAAG,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,CAAC,CAAA;IACf,GAAG,CAAC,SAAS,CAAC,CAAC,OAAO,EAAE,OAAO,CAAC,CAAA;IAChC,GAAG,CAAC,SAAS,GAAG,QAAQ,CAAA;IACxB,WAAW,CAAC,GAAG,EAAE,QAAQ,CAAC,CAAA;IAE1B,oBAAoB,CAAC;QACnB,GAAG;QACH,IAAI;QACJ,WAAW;QACX,cAAc;QACd,OAAO;QACP,QAAQ;QACR,SAAS;QACT,OAAO;QACP,SAAS,EAAE,EAAE;KACd,CAAC,CAAA;IAEF,GAAG,CAAC,cAAc,EAAE,CAAA;AACtB,CAAC;AAED,MAAM,UAAU,eAAe,CAAC,EAC9B,KAAK,EACL,GAAG,EACH,OAAO,EACP,cAAc,EACd,kBAAkB,EAClB,0BAA0B,GAQ3B;IACC,MAAM,EAAE,cAAc,EAAE,GAAG,KAAK,CAAA;IAChC,IAAI,QAAQ,GAAG,CAAC,CAAA;IAEhB,KAAK,MAAM,KAAK,IAAI,cAAc,EAAE,CAAC;QACnC,MAAM,WAAW,GAAG,KAAK,CAAC,KAAK,CAAC,MAAM,CAAA;QAEtC,IAAI,KAAK,CAAC,KAAK,CAAC,QAAQ,KAAK,SAAS,EAAE,CAAC;YACvC,uBAAuB,CAAC;gBACtB,KAAK;gBACL,GAAG;gBACH,KAAK;gBACL,OAAO;gBACP,OAAO,EAAE,QAAQ;gBACjB,WAAW;gBACX,kBAAkB;gBAClB,0BAA0B;aAC3B,CAAC,CAAA;QACJ,CAAC;aAAM,CAAC;YACN,eAAe,CAAC;gBACd,KAAK;gBACL,GAAG;gBACH,KAAK;gBACL,OAAO;gBACP,OAAO,EAAE,QAAQ;gBACjB,cAAc;gBACd,kBAAkB;gBAClB,0BAA0B;aAC3B,CAAC,CAAA;QACJ,CAAC;QAED,QAAQ,IAAI,WAAW,CAAA;IACzB,CAAC;AACH,CAAC"}
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import React, { useCallback,
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import React, { useCallback, useRef } from 'react';
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import { isAlive } from '@jbrowse/mobx-state-tree';
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import { autorun } from 'mobx';
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import { observer } from 'mobx-react';
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import TreeCanvasBlock from "./TreeCanvasBlock.js";
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import { padding } from "./renderTreeCanvas.js";
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import { useCanvasAutorun } from "../../useCanvasAutorun.js";
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import { useWheelScroll } from "../../useWheelScroll.js";
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const treeHoverColor = 'rgba(255,165,0,0.2)';
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import { referenceColor, treeHoverColor } from "../overlayColors.js";
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const TreeCanvas = observer(function ({ model }) {
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const ref = useRef(null);
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const mouseoverRef = useRef(null);
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const { treeWidth, height, blocksY, treeAreaWidth } = model;
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const onScrollY = useCallback((d) => {
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model.doScrollY(d);
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const { onMouseDown, onMouseUp } = useWheelScroll({ ref, onScrollY });
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const leaf = leafByName.get(name);
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ctx.fillRect(0, leaf.x + sy - rowHeight / 2, w, rowHeight);
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};
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if (relativeTo) {
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ctx.fillStyle = referenceColor;
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fillRow(relativeTo);
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}
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if (hoveredTreeNode) {
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ctx.fillStyle = treeHoverColor;
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for (const descendantName of hoveredTreeNode.descendantNames) {
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fillRow(descendantName);
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}
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}
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if (mouseOverRowName &&
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!hoveredTreeNode?.descendantNames.includes(mouseOverRowName)) {
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ctx.fillStyle = treeHoverColor;
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fillRow(mouseOverRowName);
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}
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+
const mouseoverRef = useCanvasAutorun(ctx => {
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if (isAlive(model)) {
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const { relativeTo, leaves, rowHeight, hoveredTreeNode, treeAreaWidth: w, height: h, scrollY: sy, mouseOverRowName, } = model;
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ctx.resetTransform();
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ctx.clearRect(0, 0, w, h);
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const leafByName = new Map(leaves.map(leaf => [leaf.data.name, leaf]));
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const fillRow = (name) => {
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const leaf = leafByName.get(name);
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if (leaf) {
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ctx.fillRect(0, leaf.x + sy - rowHeight / 2, w, rowHeight);
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}
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};
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if (relativeTo) {
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ctx.fillStyle = referenceColor;
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fillRow(relativeTo);
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}
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if (hoveredTreeNode) {
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ctx.fillStyle = treeHoverColor;
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for (const descendantName of hoveredTreeNode.descendantNames) {
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fillRow(descendantName);
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}
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}
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if (mouseOverRowName &&
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mouseOverRowName !== relativeTo &&
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!hoveredTreeNode?.descendantNames.includes(mouseOverRowName)) {
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ctx.fillStyle = treeHoverColor;
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fillRow(mouseOverRowName);
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}
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}
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}, [model]);
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return (React.createElement("div", { ref: ref, onMouseDown: onMouseDown, onMouseUp: onMouseUp, onMouseLeave: event => {
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event.preventDefault();
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@@ -1 +1 @@
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1
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-
{"version":3,"file":"TreeCanvas.js","sourceRoot":"","sources":["../../../src/components/tree/TreeCanvas.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,WAAW,EAAE,
|
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1
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+
{"version":3,"file":"TreeCanvas.js","sourceRoot":"","sources":["../../../src/components/tree/TreeCanvas.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,WAAW,EAAE,MAAM,EAAE,MAAM,OAAO,CAAA;AAElD,OAAO,EAAE,OAAO,EAAE,MAAM,0BAA0B,CAAA;AAClD,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AAErC,OAAO,eAAe,MAAM,sBAAuB,CAAA;AACnD,OAAO,EAAE,OAAO,EAAE,MAAM,uBAAuB,CAAA;AAC/C,OAAO,EAAE,gBAAgB,EAAE,MAAM,2BAA2B,CAAA;AAC5D,OAAO,EAAE,cAAc,EAAE,MAAM,yBAAyB,CAAA;AACxD,OAAO,EAAE,cAAc,EAAE,cAAc,EAAE,MAAM,qBAAqB,CAAA;AAIpE,MAAM,UAAU,GAAG,QAAQ,CAAC,UAAU,EAAE,KAAK,EAA2B;IACtE,MAAM,GAAG,GAAG,MAAM,CAAiB,IAAI,CAAC,CAAA;IACxC,MAAM,EAAE,SAAS,EAAE,MAAM,EAAE,OAAO,EAAE,aAAa,EAAE,GAAG,KAAK,CAAA;IAC3D,MAAM,SAAS,GAAG,WAAW,CAC3B,CAAC,CAAS,EAAE,EAAE;QACZ,KAAK,CAAC,SAAS,CAAC,CAAC,CAAC,CAAA;IACpB,CAAC,EACD,CAAC,KAAK,CAAC,CACR,CAAA;IACD,MAAM,EAAE,WAAW,EAAE,SAAS,EAAE,GAAG,cAAc,CAAC,EAAE,GAAG,EAAE,SAAS,EAAE,CAAC,CAAA;IAErE,MAAM,YAAY,GAAG,gBAAgB,CACnC,GAAG,CAAC,EAAE;QACJ,IAAI,OAAO,CAAC,KAAK,CAAC,EAAE,CAAC;YACnB,MAAM,EACJ,UAAU,EACV,MAAM,EACN,SAAS,EACT,eAAe,EACf,aAAa,EAAE,CAAC,EAChB,MAAM,EAAE,CAAC,EACT,OAAO,EAAE,EAAE,EACX,gBAAgB,GACjB,GAAG,KAAK,CAAA;YACT,GAAG,CAAC,cAAc,EAAE,CAAA;YACpB,GAAG,CAAC,SAAS,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,CAAA;YAEzB,MAAM,UAAU,GAAG,IAAI,GAAG,CAAC,MAAM,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC,IAAI,CAAC,IAAI,CAAC,IAAI,EAAE,IAAI,CAAC,CAAC,CAAC,CAAA;YACtE,MAAM,OAAO,GAAG,CAAC,IAAY,EAAE,EAAE;gBAC/B,MAAM,IAAI,GAAG,UAAU,CAAC,GAAG,CAAC,IAAI,CAAC,CAAA;gBACjC,IAAI,IAAI,EAAE,CAAC;oBACT,GAAG,CAAC,QAAQ,CAAC,CAAC,EAAE,IAAI,CAAC,CAAE,GAAG,EAAE,GAAG,SAAS,GAAG,CAAC,EAAE,CAAC,EAAE,SAAS,CAAC,CAAA;gBAC7D,CAAC;YACH,CAAC,CAAA;YAED,IAAI,UAAU,EAAE,CAAC;gBACf,GAAG,CAAC,SAAS,GAAG,cAAc,CAAA;gBAC9B,OAAO,CAAC,UAAU,CAAC,CAAA;YACrB,CAAC;YAED,IAAI,eAAe,EAAE,CAAC;gBACpB,GAAG,CAAC,SAAS,GAAG,cAAc,CAAA;gBAC9B,KAAK,MAAM,cAAc,IAAI,eAAe,CAAC,eAAe,EAAE,CAAC;oBAC7D,OAAO,CAAC,cAAc,CAAC,CAAA;gBACzB,CAAC;YACH,CAAC;YAED,IACE,gBAAgB;gBAChB,gBAAgB,KAAK,UAAU;gBAC/B,CAAC,eAAe,EAAE,eAAe,CAAC,QAAQ,CAAC,gBAAgB,CAAC,EAC5D,CAAC;gBACD,GAAG,CAAC,SAAS,GAAG,cAAc,CAAA;gBAC9B,OAAO,CAAC,gBAAgB,CAAC,CAAA;YAC3B,CAAC;QACH,CAAC;IACH,CAAC,EACD,CAAC,KAAK,CAAC,CACR,CAAA;IAED,OAAO,CACL,6BACE,GAAG,EAAE,GAAG,EACR,WAAW,EAAE,WAAW,EACxB,SAAS,EAAE,SAAS,EACpB,YAAY,EAAE,KAAK,CAAC,EAAE;YACpB,KAAK,CAAC,cAAc,EAAE,CAAA;QACxB,CAAC,EACD,KAAK,EAAE;YACL,MAAM;YACN,QAAQ,EAAE,UAAU;YACpB,KAAK,EAAE,SAAS,GAAG,OAAO;SAC3B;QAEA,OAAO,CAAC,GAAG,CAAC,KAAK,CAAC,EAAE,CAAC,CACpB,oBAAC,eAAe,IAAC,GAAG,EAAE,KAAK,EAAE,KAAK,EAAE,KAAK,EAAE,OAAO,EAAE,KAAK,GAAI,CAC9D,CAAC;QACF,gCACE,GAAG,EAAE,YAAY,EACjB,KAAK,EAAE,aAAa,EACpB,MAAM,EAAE,MAAM,EACd,KAAK,EAAE;gBACL,QAAQ,EAAE,UAAU;gBACpB,GAAG,EAAE,CAAC;gBACN,IAAI,EAAE,CAAC;gBACP,KAAK,EAAE,aAAa;gBACpB,MAAM;gBACN,MAAM,EAAE,IAAI;gBACZ,aAAa,EAAE,MAAM;aACtB,GACD,CACE,CACP,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,eAAe,UAAU,CAAA"}
|
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@@ -1,12 +1,12 @@
|
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1
1
|
import React, { useEffect, useRef, useState } from 'react';
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2
|
+
import { makeStyles } from '@jbrowse/core/util/tss-react';
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2
3
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import { useTheme } from '@mui/material';
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import Flatbush from 'flatbush';
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4
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import { autorun } from 'mobx';
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5
4
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import { observer } from 'mobx-react';
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6
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import { makeStyles } from 'tss-react/mui';
|
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7
5
|
import TreeBranchMenu from "./TreeBranchMenu.js";
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8
6
|
import TreeNodeMenu from "./TreeNodeMenu.js";
|
|
7
|
+
import { ClickMapIndex } from "./clickMap.js";
|
|
9
8
|
import { padding, renderTreeCanvas } from "./renderTreeCanvas.js";
|
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9
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+
import { useCanvasAutorun } from "../../useCanvasAutorun.js";
|
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10
10
|
const useStyles = makeStyles()(theme => ({
|
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11
|
tooltip: {
|
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12
12
|
position: 'fixed',
|
|
@@ -23,38 +23,9 @@ const useStyles = makeStyles()(theme => ({
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23
23
|
textOverflow: 'ellipsis',
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24
24
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},
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class ClickMapIndex {
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flatbush = null;
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entries = [];
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clear() {
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this.entries = [];
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}
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insert(entry) {
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}
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finish() {
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}
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else {
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this.flatbush = new Flatbush(this.entries.length);
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for (const entry of this.entries) {
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this.flatbush.add(entry.minX, entry.minY, entry.maxX, entry.maxY);
|
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|
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}
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this.flatbush.finish();
|
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}
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|
-
}
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search(box) {
|
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|
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return (this.flatbush
|
|
50
|
-
?.search(box.minX, box.minY, box.maxX, box.maxY)
|
|
51
|
-
.map(i => this.entries[i]) ?? []);
|
|
52
|
-
}
|
|
53
|
-
}
|
|
54
26
|
const TreeCanvasBlock = observer(function ({ model, offsetY, }) {
|
|
55
27
|
const { classes } = useStyles();
|
|
56
28
|
const theme = useTheme();
|
|
57
|
-
const ref = useRef(null);
|
|
58
29
|
const clickMap = useRef(new ClickMapIndex());
|
|
59
30
|
const mouseoverRef = useRef(null);
|
|
60
31
|
const [branchMenu, setBranchMenu] = useState();
|
|
@@ -66,21 +37,15 @@ const TreeCanvasBlock = observer(function ({ model, offsetY, }) {
|
|
|
66
37
|
const height = blockSize;
|
|
67
38
|
const w2 = width * highResScaleFactor;
|
|
68
39
|
const h2 = height * highResScaleFactor;
|
|
69
|
-
|
|
70
|
-
|
|
71
|
-
|
|
72
|
-
|
|
73
|
-
|
|
74
|
-
|
|
75
|
-
|
|
76
|
-
|
|
77
|
-
|
|
78
|
-
ctx,
|
|
79
|
-
model,
|
|
80
|
-
offsetY,
|
|
81
|
-
clickMap: clickMap.current,
|
|
82
|
-
theme,
|
|
83
|
-
});
|
|
40
|
+
const ref = useCanvasAutorun(ctx => {
|
|
41
|
+
ctx.resetTransform();
|
|
42
|
+
ctx.clearRect(0, 0, w2, h2);
|
|
43
|
+
renderTreeCanvas({
|
|
44
|
+
ctx,
|
|
45
|
+
model,
|
|
46
|
+
offsetY,
|
|
47
|
+
clickMap: clickMap.current,
|
|
48
|
+
theme,
|
|
84
49
|
});
|
|
85
50
|
}, [model, blockSize, highResScaleFactor, treeAreaWidth, offsetY, theme]);
|
|
86
51
|
useEffect(() => {
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"TreeCanvasBlock.js","sourceRoot":"","sources":["../../../src/components/tree/TreeCanvasBlock.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,SAAS,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,OAAO,CAAA;AAE1D,OAAO,EAAE,
|
|
1
|
+
{"version":3,"file":"TreeCanvasBlock.js","sourceRoot":"","sources":["../../../src/components/tree/TreeCanvasBlock.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,SAAS,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,OAAO,CAAA;AAE1D,OAAO,EAAE,UAAU,EAAE,MAAM,8BAA8B,CAAA;AACzD,OAAO,EAAE,QAAQ,EAAE,MAAM,eAAe,CAAA;AACxC,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AAErC,OAAO,cAAc,MAAM,qBAAsB,CAAA;AACjD,OAAO,YAAY,MAAM,mBAAoB,CAAA;AAC7C,OAAO,EAAE,aAAa,EAAE,MAAM,eAAe,CAAA;AAC7C,OAAO,EAAE,OAAO,EAAE,gBAAgB,EAAE,MAAM,uBAAuB,CAAA;AACjE,OAAO,EAAE,gBAAgB,EAAE,MAAM,2BAA2B,CAAA;AAK5D,MAAM,SAAS,GAAG,UAAU,EAAE,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;IACvC,OAAO,EAAE;QACP,QAAQ,EAAE,OAAO;QACjB,aAAa,EAAE,MAAM;QACrB,MAAM,EAAE,KAAK;QACb,eAAe,EAAE,KAAK,CAAC,OAAO,CAAC,IAAI,CAAC,GAAG,CAAC;QACxC,KAAK,EAAE,KAAK,CAAC,OAAO,CAAC,MAAM,CAAC,KAAK;QACjC,OAAO,EAAE,SAAS;QAClB,YAAY,EAAE,CAAC;QACf,QAAQ,EAAE,EAAE;QACZ,UAAU,EAAE,QAAQ;QACpB,QAAQ,EAAE,GAAG;QACb,QAAQ,EAAE,QAAQ;QAClB,YAAY,EAAE,UAAU;KACzB;CACF,CAAC,CAAC,CAAA;AASH,MAAM,eAAe,GAAG,QAAQ,CAAC,UAAU,EACzC,KAAK,EACL,OAAO,GAIR;IACC,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAC/B,MAAM,KAAK,GAAG,QAAQ,EAAE,CAAA;IACxB,MAAM,QAAQ,GAAG,MAAM,CAAC,IAAI,aAAa,EAAE,CAAC,CAAA;IAC5C,MAAM,YAAY,GAAG,MAAM,CAAoB,IAAI,CAAC,CAAA;IACpD,MAAM,CAAC,UAAU,EAAE,aAAa,CAAC,GAAG,QAAQ,EAAe,CAAA;IAC3D,MAAM,CAAC,cAAc,EAAE,iBAAiB,CAAC,GAAG,QAAQ,EAAe,CAAA;IACnE,MAAM,CAAC,QAAQ,EAAE,WAAW,CAAC,GAAG,QAAQ,EAAc,CAAA;IACtD,MAAM,CAAC,WAAW,EAAE,cAAc,CAAC,GAAG,QAAQ,EAI1C,CAAA;IAEJ,MAAM,EAAE,OAAO,EAAE,aAAa,EAAE,SAAS,EAAE,kBAAkB,EAAE,GAAG,KAAK,CAAA;IAEvE,MAAM,KAAK,GAAG,aAAa,GAAG,OAAO,CAAA;IACrC,MAAM,MAAM,GAAG,SAAS,CAAA;IACxB,MAAM,EAAE,GAAG,KAAK,GAAG,kBAAkB,CAAA;IACrC,MAAM,EAAE,GAAG,MAAM,GAAG,kBAAkB,CAAA;IAEtC,MAAM,GAAG,GAAG,gBAAgB,CAC1B,GAAG,CAAC,EAAE;QACJ,GAAG,CAAC,cAAc,EAAE,CAAA;QACpB,GAAG,CAAC,SAAS,CAAC,CAAC,EAAE,CAAC,EAAE,EAAE,EAAE,EAAE,CAAC,CAAA;QAC3B,gBAAgB,CAAC;YACf,GAAG;YACH,KAAK;YACL,OAAO;YACP,QAAQ,EAAE,QAAQ,CAAC,OAAO;YAC1B,KAAK;SACN,CAAC,CAAA;IACJ,CAAC,EACD,CAAC,KAAK,EAAE,SAAS,EAAE,kBAAkB,EAAE,aAAa,EAAE,OAAO,EAAE,KAAK,CAAC,CACtE,CAAA;IAED,SAAS,CAAC,GAAG,EAAE;QACb,MAAM,GAAG,GAAG,YAAY,CAAC,OAAO,EAAE,UAAU,CAAC,IAAI,CAAC,CAAA;QAClD,IAAI,CAAC,GAAG,EAAE,CAAC;YACT,OAAM;QACR,CAAC;QAED,GAAG,CAAC,cAAc,EAAE,CAAA;QACpB,GAAG,CAAC,SAAS,CAAC,CAAC,EAAE,CAAC,EAAE,aAAa,GAAG,OAAO,EAAE,SAAS,CAAC,CAAA;QACvD,GAAG,CAAC,SAAS,CAAC,CAAC,EAAE,CAAC,OAAO,CAAC,CAAA;QAE1B,gDAAgD;QAChD,IAAI,QAAQ,EAAE,CAAC;YACb,MAAM,EAAE,IAAI,EAAE,IAAI,EAAE,IAAI,EAAE,IAAI,EAAE,GAAG,QAAQ,CAAA;YAE3C,GAAG,CAAC,SAAS,GAAG,iBAAiB,CAAA;YACjC,GAAG,CAAC,QAAQ,CAAC,IAAI,EAAE,IAAI,EAAE,IAAI,GAAG,IAAI,EAAE,IAAI,GAAG,IAAI,CAAC,CAAA;QACpD,CAAC;IACH,CAAC,EAAE,CAAC,QAAQ,EAAE,OAAO,EAAE,SAAS,EAAE,aAAa,CAAC,CAAC,CAAA;IAEjD,SAAS,mBAAmB,CAAC,KAAuB;QAClD,MAAM,CAAC,GAAG,KAAK,CAAC,WAAW,CAAC,OAAO,CAAA;QACnC,MAAM,CAAC,GAAG,KAAK,CAAC,WAAW,CAAC,OAAO,CAAA;QAEnC,MAAM,CAAC,KAAK,CAAC,GAAG,QAAQ,CAAC,OAAO,CAAC,MAAM,CAAC;YACtC,IAAI,EAAE,CAAC;YACP,IAAI,EAAE,CAAC,GAAG,CAAC;YACX,IAAI,EAAE,CAAC,GAAG,OAAO;YACjB,IAAI,EAAE,CAAC,GAAG,CAAC,GAAG,OAAO;SACtB,CAAC,CAAA;QAEF,OAAO,KAAK,EAAE,MAAM;YAClB,CAAC,CAAC,EAAE,GAAG,KAAK,EAAE,CAAC,EAAE,KAAK,CAAC,OAAO,EAAE,CAAC,EAAE,KAAK,CAAC,OAAO,EAAE;YAClD,CAAC,CAAC,SAAS,CAAA;IACf,CAAC;IAED,SAAS,iBAAiB,CAAC,KAAuB;QAChD,MAAM,CAAC,GAAG,KAAK,CAAC,WAAW,CAAC,OAAO,CAAA;QACnC,MAAM,CAAC,GAAG,KAAK,CAAC,WAAW,CAAC,OAAO,CAAA;QACnC,MAAM,CAAC,KAAK,CAAC,GAAG,QAAQ,CAAC,OAAO,CAAC,MAAM,CAAC;YACtC,IAAI,EAAE,CAAC;YACP,IAAI,EAAE,CAAC,GAAG,CAAC;YACX,IAAI,EAAE,CAAC,GAAG,OAAO;YACjB,IAAI,EAAE,CAAC,GAAG,CAAC,GAAG,OAAO;SACtB,CAAC,CAAA;QAEF,OAAO,KAAK,IAAI,CAAC,KAAK,CAAC,MAAM;YAC3B,CAAC,CAAC,EAAE,GAAG,KAAK,EAAE,CAAC,EAAE,KAAK,CAAC,OAAO,EAAE,CAAC,EAAE,KAAK,CAAC,OAAO,EAAE;YAClD,CAAC,CAAC,SAAS,CAAA;IACf,CAAC;IACD,MAAM,KAAK,GAAG;QACZ,KAAK;QACL,MAAM;QACN,GAAG,EAAE,OAAO,GAAG,OAAO;QACtB,IAAI,EAAE,CAAC;QACP,QAAQ,EAAE,UAAU;KACZ,CAAA;IACV,OAAO,CACL;QACG,UAAU,EAAE,EAAE,CAAC,CAAC,CAAC,CAChB,oBAAC,cAAc,IACb,IAAI,EAAE,UAAU,EAChB,KAAK,EAAE,KAAK,EACZ,OAAO,EAAE,GAAG,EAAE;gBACZ,aAAa,CAAC,SAAS,CAAC,CAAA;YAC1B,CAAC,GACD,CACH,CAAC,CAAC,CAAC,IAAI;QAEP,cAAc,EAAE,EAAE,CAAC,CAAC,CAAC,CACpB,oBAAC,YAAY,IACX,IAAI,EAAE,cAAc,EACpB,KAAK,EAAE,KAAK,EACZ,OAAO,EAAE,GAAG,EAAE;gBACZ,iBAAiB,CAAC,SAAS,CAAC,CAAA;YAC9B,CAAC,GACD,CACH,CAAC,CAAC,CAAC,IAAI;QAER,gCACE,KAAK,EAAE,EAAE,EACT,MAAM,EAAE,EAAE,EACV,KAAK,EAAE,KAAK,EACZ,WAAW,EAAE,KAAK,CAAC,EAAE;gBACnB,IAAI,CAAC,GAAG,CAAC,OAAO,EAAE,CAAC;oBACjB,OAAM;gBACR,CAAC;gBAED,MAAM,WAAW,GAAG,iBAAiB,CAAC,KAAK,CAAC,CAAA;gBAC5C,MAAM,aAAa,GAAG,mBAAmB,CAAC,KAAK,CAAC,CAAA;gBAChD,MAAM,UAAU,GAAG,WAAW,IAAI,aAAa,CAAA;gBAE/C,GAAG,CAAC,OAAO,CAAC,KAAK,CAAC,MAAM,GAAG,UAAU,CAAC,CAAC,CAAC,SAAS,CAAC,CAAC,CAAC,SAAS,CAAA;gBAC7D,WAAW,CAAC,WAAW,CAAC,CAAA,CAAC,kDAAkD;gBAE3E,mBAAmB;gBACnB,IAAI,UAAU,EAAE,CAAC;oBACf,cAAc,CAAC;wBACb,IAAI,EAAE,UAAU,CAAC,IAAI;wBACrB,CAAC,EAAE,KAAK,CAAC,OAAO;wBAChB,CAAC,EAAE,KAAK,CAAC,OAAO;qBACjB,CAAC,CAAA;gBACJ,CAAC;qBAAM,CAAC;oBACN,cAAc,CAAC,SAAS,CAAC,CAAA;gBAC3B,CAAC;gBAED,oDAAoD;gBACpD,IAAI,UAAU,EAAE,CAAC;oBACf,KAAK,CAAC,kBAAkB,CAAC,UAAU,CAAC,EAAE,CAAC,CAAA;oBAEvC,2EAA2E;oBAC3E,IAAI,WAAW,EAAE,IAAI,EAAE,CAAC;wBACtB,MAAM,QAAQ,GAAG,KAAK,CAAC,WAAW,CAAC,GAAG,CAAC,WAAW,CAAC,IAAI,CAAC,CAAA;wBACxD,IAAI,QAAQ,KAAK,SAAS,EAAE,CAAC;4BAC3B,KAAK,CAAC,WAAW,CAAC,SAAS,EAAE,QAAQ,CAAC,CAAA;wBACxC,CAAC;oBACH,CAAC;gBACH,CAAC;qBAAM,CAAC;oBACN,8DAA8D;oBAC9D,KAAK,CAAC,kBAAkB,CAAC,SAAS,CAAC,CAAA;oBACnC,KAAK,CAAC,WAAW,CAAC,SAAS,EAAE,SAAS,CAAC,CAAA;gBACzC,CAAC;YACH,CAAC,EACD,OAAO,EAAE,KAAK,CAAC,EAAE;gBACf,MAAM,EAAE,OAAO,EAAE,CAAC,EAAE,OAAO,EAAE,CAAC,EAAE,GAAG,KAAK,CAAA;gBAExC,MAAM,IAAI,GAAG,mBAAmB,CAAC,KAAK,CAAC,CAAA;gBACvC,IAAI,IAAI,EAAE,EAAE,EAAE,CAAC;oBACb,aAAa,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,EAAE,EAAE,IAAI,CAAC,EAAE,EAAE,IAAI,EAAE,IAAI,CAAC,IAAI,EAAE,CAAC,CAAA;gBACvD,CAAC;gBAED,MAAM,KAAK,GAAG,iBAAiB,CAAC,KAAK,CAAC,CAAA;gBACtC,IAAI,KAAK,EAAE,EAAE,EAAE,CAAC;oBACd,iBAAiB,CAAC,EAAE,GAAG,KAAK,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,CAAA;gBACvC,CAAC;YACH,CAAC,EACD,YAAY,EAAE,GAAG,EAAE;gBACjB,WAAW,CAAC,SAAS,CAAC,CAAA;gBACtB,cAAc,CAAC,SAAS,CAAC,CAAA;gBACzB,gDAAgD;gBAChD,KAAK,CAAC,kBAAkB,CAAC,SAAS,CAAC,CAAA;gBACnC,KAAK,CAAC,WAAW,CAAC,SAAS,EAAE,SAAS,CAAC,CAAA;YACzC,CAAC,EACD,GAAG,EAAE,GAAG,GACR;QACF,gCACE,KAAK,EAAE;gBACL,GAAG,KAAK;gBACR,aAAa,EAAE,MAAM;gBACrB,MAAM,EAAE,GAAG;aACZ,EACD,KAAK,EAAE,KAAK,EACZ,MAAM,EAAE,MAAM,EACd,GAAG,EAAE,YAAY,GACjB;QACD,WAAW,CAAC,CAAC,CAAC,CACb,6BACE,SAAS,EAAE,OAAO,CAAC,OAAO,EAC1B,KAAK,EAAE,EAAE,IAAI,EAAE,WAAW,CAAC,CAAC,GAAG,EAAE,EAAE,GAAG,EAAE,WAAW,CAAC,CAAC,GAAG,EAAE,EAAE,IAE3D,WAAW,CAAC,IAAI,CACb,CACP,CAAC,CAAC,CAAC,IAAI,CACP,CACJ,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,eAAe,eAAe,CAAA"}
|
|
@@ -0,0 +1,24 @@
|
|
|
1
|
+
export interface ClickEntry {
|
|
2
|
+
name: string;
|
|
3
|
+
id: string;
|
|
4
|
+
branch?: boolean;
|
|
5
|
+
minX: number;
|
|
6
|
+
maxX: number;
|
|
7
|
+
minY: number;
|
|
8
|
+
maxY: number;
|
|
9
|
+
}
|
|
10
|
+
interface Box {
|
|
11
|
+
minX: number;
|
|
12
|
+
maxX: number;
|
|
13
|
+
minY: number;
|
|
14
|
+
maxY: number;
|
|
15
|
+
}
|
|
16
|
+
export declare class ClickMapIndex {
|
|
17
|
+
private flatbush;
|
|
18
|
+
private entries;
|
|
19
|
+
clear(): void;
|
|
20
|
+
insert(entry: ClickEntry): void;
|
|
21
|
+
finish(): void;
|
|
22
|
+
search(box: Box): ClickEntry[];
|
|
23
|
+
}
|
|
24
|
+
export {};
|
|
@@ -0,0 +1,33 @@
|
|
|
1
|
+
import Flatbush from 'flatbush';
|
|
2
|
+
// Spatial index of clickable tree elements (leaf labels, node bubbles,
|
|
3
|
+
// collapsed-clade triangles). Entries are collected during a render pass, then
|
|
4
|
+
// finish() builds the Flatbush index queried by hit-testing.
|
|
5
|
+
export class ClickMapIndex {
|
|
6
|
+
flatbush = null;
|
|
7
|
+
entries = [];
|
|
8
|
+
clear() {
|
|
9
|
+
this.flatbush = null;
|
|
10
|
+
this.entries = [];
|
|
11
|
+
}
|
|
12
|
+
insert(entry) {
|
|
13
|
+
this.entries.push(entry);
|
|
14
|
+
}
|
|
15
|
+
finish() {
|
|
16
|
+
if (this.entries.length === 0) {
|
|
17
|
+
this.flatbush = null;
|
|
18
|
+
}
|
|
19
|
+
else {
|
|
20
|
+
this.flatbush = new Flatbush(this.entries.length);
|
|
21
|
+
for (const entry of this.entries) {
|
|
22
|
+
this.flatbush.add(entry.minX, entry.minY, entry.maxX, entry.maxY);
|
|
23
|
+
}
|
|
24
|
+
this.flatbush.finish();
|
|
25
|
+
}
|
|
26
|
+
}
|
|
27
|
+
search(box) {
|
|
28
|
+
return (this.flatbush
|
|
29
|
+
?.search(box.minX, box.minY, box.maxX, box.maxY)
|
|
30
|
+
.map(i => this.entries[i]) ?? []);
|
|
31
|
+
}
|
|
32
|
+
}
|
|
33
|
+
//# sourceMappingURL=clickMap.js.map
|
|
@@ -0,0 +1 @@
|
|
|
1
|
+
{"version":3,"file":"clickMap.js","sourceRoot":"","sources":["../../../src/components/tree/clickMap.ts"],"names":[],"mappings":"AAAA,OAAO,QAAQ,MAAM,UAAU,CAAA;AAmB/B,uEAAuE;AACvE,+EAA+E;AAC/E,6DAA6D;AAC7D,MAAM,OAAO,aAAa;IAChB,QAAQ,GAAoB,IAAI,CAAA;IAChC,OAAO,GAAiB,EAAE,CAAA;IAElC,KAAK;QACH,IAAI,CAAC,QAAQ,GAAG,IAAI,CAAA;QACpB,IAAI,CAAC,OAAO,GAAG,EAAE,CAAA;IACnB,CAAC;IAED,MAAM,CAAC,KAAiB;QACtB,IAAI,CAAC,OAAO,CAAC,IAAI,CAAC,KAAK,CAAC,CAAA;IAC1B,CAAC;IAED,MAAM;QACJ,IAAI,IAAI,CAAC,OAAO,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;YAC9B,IAAI,CAAC,QAAQ,GAAG,IAAI,CAAA;QACtB,CAAC;aAAM,CAAC;YACN,IAAI,CAAC,QAAQ,GAAG,IAAI,QAAQ,CAAC,IAAI,CAAC,OAAO,CAAC,MAAM,CAAC,CAAA;YACjD,KAAK,MAAM,KAAK,IAAI,IAAI,CAAC,OAAO,EAAE,CAAC;gBACjC,IAAI,CAAC,QAAQ,CAAC,GAAG,CAAC,KAAK,CAAC,IAAI,EAAE,KAAK,CAAC,IAAI,EAAE,KAAK,CAAC,IAAI,EAAE,KAAK,CAAC,IAAI,CAAC,CAAA;YACnE,CAAC;YACD,IAAI,CAAC,QAAQ,CAAC,MAAM,EAAE,CAAA;QACxB,CAAC;IACH,CAAC;IAED,MAAM,CAAC,GAAQ;QACb,OAAO,CACL,IAAI,CAAC,QAAQ;YACX,EAAE,MAAM,CAAC,GAAG,CAAC,IAAI,EAAE,GAAG,CAAC,IAAI,EAAE,GAAG,CAAC,IAAI,EAAE,GAAG,CAAC,IAAI,CAAC;aAC/C,GAAG,CAAC,CAAC,CAAC,EAAE,CAAC,IAAI,CAAC,OAAO,CAAC,CAAC,CAAE,CAAC,IAAI,EAAE,CACpC,CAAA;IACH,CAAC;CACF"}
|