react-msaview 3.1.12 → 3.2.0

package/dist/colorSchemes.d.ts

@@ -2,9 +2,9 @@ declare const _default: {
     [k: string]: Record<string, string>;
 };
 export default _default;
-export declare function getClustalXColor(stats: Record<string, number>, model: {
+export declare function getClustalXColor(stats: Record<string, number>, total: number, model: {
     columns: Record<string, string>;
 }, row: string, col: number): "rgb(128,179,230)" | "#d88" | "rgb(192, 72, 192)" | "rgb(204, 77, 204)" | "#8f8" | "rgb(26,204,26)" | "rgb(240, 128, 128)" | "rgb(240, 144, 72)" | "rgb(204, 204, 0)" | "rgb(26, 179, 179)" | undefined;
-export declare function getPercentIdentityColor(stats: Record<string, number>, model: {
+export declare function getPercentIdentityColor(stats: Record<string, number>, total: number, model: {
     columns: Record<string, string>;
 }, row: string, col: number): string | undefined;

package/dist/colorSchemes.js

@@ -3,6 +3,7 @@ import namesPlugin from 'colord/plugins/names';
 import { transform } from './util';
 extend([namesPlugin]);
 const colorSchemes = {
+    none: {},
     clustal: {
         G: 'orange',
         P: 'orange',
@@ -334,8 +335,7 @@ export default transform(colorSchemes, ([key, val]) => [
 // reference to clustalX source code scheme modifies what the jalview.org
 // scheme says there the jalview.org colorscheme says WLVIMAFCHP but it
 // should be WLVIMAFCHPY, colprot.xml says e.g. %#ACFHILMVWYPp" which has Y
-export function getClustalXColor(stats, model, row, col) {
-    const total = Object.values(stats).reduce((a, b) => a + b, 0);
+export function getClustalXColor(stats, total, model, row, col) {
     const l = model.columns[row][col];
     const { W = 0, L = 0, V = 0, I = 0, M = 0, A = 0, F = 0, C = 0, H = 0, P = 0, R = 0, K = 0, Q = 0, E = 0, D = 0, T = 0, S = 0, G = 0, Y = 0, N = 0, } = stats;
     const WLVIMAFCHP = W + L + V + I + M + A + F + C + H + P + Y;
@@ -429,8 +429,7 @@ export function getClustalXColor(stats, model, row, col) {
 // reference to clustalX source code scheme modifies what the jalview.org
 // scheme says there the jalview.org colorscheme says WLVIMAFCHP but it
 // should be WLVIMAFCHPY, colprot.xml says e.g. %#ACFHILMVWYPp" which has Y
-export function getPercentIdentityColor(stats, model, row, col) {
-    const total = Object.values(stats).reduce((a, b) => a + b, 0);
+export function getPercentIdentityColor(stats, total, model, row, col) {
     const l = model.columns[row][col];
     const entries = Object.entries(stats);
     let ent = 0;

package/dist/colorSchemes.js.map

@@ -1 +1 @@
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package/dist/components/Loading.d.ts

@@ -1,5 +1,5 @@
 import React from 'react';
-import { MsaViewModel } from '../model';
+import type { MsaViewModel } from '../model';
 declare const Loading: ({ model }: {
     model: MsaViewModel;
 }) => React.JSX.Element;

package/dist/components/Loading.js

@@ -6,15 +6,15 @@ import { ErrorMessage } from '@jbrowse/core/ui';
 // locals
 import ImportForm from './import/ImportForm';
 import MSAView from './MSAView';
-function Reset({ model, error }) {
+const Reset = observer(function ({ model, error, }) {
     return (React.createElement("div", null,
         React.createElement(ErrorMessage, { error: error }),
         React.createElement(Button, { variant: "contained", color: "primary", onClick: () => model.reset() }, "Return to import form")));
-}
+});
 const Loading = observer(function ({ model }) {
-    const { isLoading, initialized } = model;
+    const { isLoading, dataInitialized } = model;
     return (React.createElement("div", null,
-        React.createElement(ErrorBoundary, { fallbackRender: props => React.createElement(Reset, { model: model, error: props.error }) }, initialized ? (isLoading ? (React.createElement(Typography, { variant: "h4" }, "Loading...")) : (React.createElement(MSAView, { model: model }))) : (React.createElement(ImportForm, { model: model })))));
+        React.createElement(ErrorBoundary, { fallbackRender: props => React.createElement(Reset, { model: model, error: props.error }) }, dataInitialized ? (isLoading ? (React.createElement(Typography, { variant: "h4" }, "Loading...")) : (React.createElement(MSAView, { model: model }))) : (React.createElement(ImportForm, { model: model })))));
 });
 export default Loading;
 //# sourceMappingURL=Loading.js.map

package/dist/components/Loading.js.map

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package/dist/components/MSAView.d.ts

@@ -1,5 +1,5 @@
 import React from 'react';
-import { MsaViewModel } from '../model';
+import type { MsaViewModel } from '../model';
 declare const MSAView: ({ model }: {
     model: MsaViewModel;
 }) => React.JSX.Element;

package/dist/components/MSAView.js

@@ -7,31 +7,35 @@ import Header from './header/Header';
 import MSAPanel from './msa/MSAPanel';
 import TreePanel from './tree/TreePanel';
 import Minimap from './minimap/Minimap';
-function TopArea({ model }) {
+import VerticalScrollbar from './VerticalScrollbar';
+const TopArea = observer(function ({ model }) {
+    const { showHorizontalScrollbar } = model;
     return (React.createElement("div", { style: { display: 'flex' } },
         React.createElement(TreeRuler, { model: model }),
-        React.createElement(Minimap, { model: model })));
-}
-function MainArea({ model }) {
+        showHorizontalScrollbar ? React.createElement(Minimap, { model: model }) : null));
+});
+const MainArea = observer(function ({ model }) {
+    const { showVerticalScrollbar } = model;
     return (React.createElement("div", { style: { display: 'flex' } },
         React.createElement(TreePanel, { model: model }),
         React.createElement(VerticalResizeHandle, { model: model }),
-        React.createElement(MSAPanel, { model: model })));
-}
+        React.createElement(MSAPanel, { model: model }),
+        showVerticalScrollbar ? React.createElement(VerticalScrollbar, { model: model }) : null));
+});
 const View = observer(function ({ model }) {
     return (React.createElement("div", { style: { position: 'relative' } },
         React.createElement(TopArea, { model: model }),
         React.createElement(MainArea, { model: model })));
 });
 const MSAView = observer(function ({ model }) {
-    const { height, DialogComponent, DialogProps } = model;
-    return (React.createElement("div", null,
+    const { height, viewInitialized, DialogComponent, DialogProps } = model;
+    return (React.createElement("div", null, viewInitialized ? (React.createElement(React.Fragment, null,
         React.createElement("div", { style: { height, overflow: 'hidden' } },
             React.createElement(Header, { model: model }),
             React.createElement(View, { model: model })),
         React.createElement(HorizontalResizeHandle, { model: model }),
         DialogComponent ? (React.createElement(Suspense, { fallback: null },
-            React.createElement(DialogComponent, { ...DialogProps }))) : null));
+            React.createElement(DialogComponent, { ...DialogProps }))) : null)) : null));
 });
 export default MSAView;
 //# sourceMappingURL=MSAView.js.map

package/dist/components/MSAView.js.map

@@ -1 +1 @@
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package/dist/components/ResizeHandles.d.ts

@@ -1,5 +1,5 @@
 import React from 'react';
-import { MsaViewModel } from '../model';
+import type { MsaViewModel } from '../model';
 export declare const VerticalResizeHandle: ({ model, }: {
     model: MsaViewModel;
 }) => React.JSX.Element;

package/dist/components/ResizeHandles.js

@@ -49,7 +49,7 @@ export const VerticalResizeHandle = observer(function ({ model, }) {
                 cursor: 'ew-resize',
                 height: '100%',
                 width: resizeHandleWidth,
-                background: `rgba(200,200,200)`,
+                background: 'rgba(200,200,200)',
                 position: 'relative',
             } })));
 });
@@ -102,7 +102,7 @@ export const HorizontalResizeHandle = observer(function ({ model, }) {
                 cursor: 'ns-resize',
                 width: '100%',
                 height: resizeHandleWidth,
-                background: `rgba(200,200,200)`,
+                background: 'rgba(200,200,200)',
                 position: 'relative',
             } })));
 });

package/dist/components/TextTrack.d.ts

@@ -1,5 +1,5 @@
 import React from 'react';
-import { MsaViewModel, ITextTrack } from '../model';
+import type { MsaViewModel, ITextTrack } from '../model';
 declare const AnnotationTrack: ({ track, model, }: {
     track: ITextTrack;
     model: MsaViewModel;

package/dist/components/Track.d.ts

@@ -1,5 +1,5 @@
 import React from 'react';
-import { MsaViewModel } from '../model';
+import type { MsaViewModel } from '../model';
 export declare const TrackLabel: ({ model, track, }: {
     model: MsaViewModel;
     track: any;

package/dist/components/VerticalScrollbar.d.ts

@@ -0,0 +1,6 @@
+import React from 'react';
+import type { MsaViewModel } from '../model';
+declare const VerticalScrollbar: ({ model }: {
+    model: MsaViewModel;
+}) => React.JSX.Element;
+export default VerticalScrollbar;

package/dist/components/VerticalScrollbar.js

@@ -0,0 +1,65 @@
+import { observer } from 'mobx-react';
+import React, { useEffect, useRef, useState } from 'react';
+import { clamp } from '../util';
+const VerticalScrollbar = observer(({ model }) => {
+    const { msaAreaHeight, scrollY, totalHeight } = model;
+    const [hovered, setHovered] = useState(false);
+    const scheduled = useRef(false);
+    const [mouseDown, setMouseDown] = useState();
+    const fill = 'rgba(66, 119, 127, 0.3)';
+    const unit = msaAreaHeight / totalHeight;
+    const top = -scrollY;
+    const bottom = top + msaAreaHeight;
+    const t = top * unit;
+    const b = bottom * unit;
+    useEffect(() => {
+        function fn(event) {
+            if (mouseDown !== undefined) {
+                if (!scheduled.current) {
+                    scheduled.current = true;
+                    window.requestAnimationFrame(() => {
+                        model.setScrollY(clamp(-totalHeight, mouseDown.scrollY - (event.clientY - mouseDown.clientY) / unit, 0));
+                        scheduled.current = false;
+                    });
+                }
+            }
+        }
+        function fn2() {
+            setMouseDown(undefined);
+        }
+        if (mouseDown !== undefined) {
+            document.addEventListener('mousemove', fn);
+            document.addEventListener('mouseup', fn2);
+            return () => {
+                document.removeEventListener('mousemove', fn);
+                document.removeEventListener('mousemove', fn2);
+            };
+        }
+    }, [model, unit, totalHeight, mouseDown]);
+    return (React.createElement("div", { style: {
+            position: 'relative',
+            width: 20,
+            height: msaAreaHeight,
+            borderLeft: '1px solid #555',
+            borderTop: '1px solid #555',
+            boxSizing: 'border-box',
+        } },
+        React.createElement("div", { style: {
+                position: 'absolute',
+                top: Math.max(0, t),
+                left: 0,
+                background: hovered ? 'rgba(66,119,127,0.6)' : fill,
+                cursor: 'pointer',
+                boxSizing: 'border-box',
+                width: 20,
+                height: Math.max(b - t, 20),
+                zIndex: 100,
+            }, onMouseOver: () => setHovered(true), onMouseOut: () => setHovered(false), onMouseDown: event => {
+                setMouseDown({
+                    clientY: event.clientY,
+                    scrollY: model.scrollY,
+                });
+            } })));
+});
+export default VerticalScrollbar;
+//# sourceMappingURL=VerticalScrollbar.js.map

package/dist/components/VerticalScrollbar.js.map

@@ -0,0 +1 @@
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package/dist/components/dialogs/AddTrackDialog.d.ts

@@ -1,5 +1,5 @@
 import React from 'react';
-import { MsaViewModel } from '../../model';
+import type { MsaViewModel } from '../../model';
 declare const _default: ({ model, onClose, open, }: {
     model: MsaViewModel;
     onClose: () => void;

package/dist/components/dialogs/DomainDialog.d.ts

@@ -1,5 +1,5 @@
 import React from 'react';
-import { MsaViewModel } from '../../model';
+import type { MsaViewModel } from '../../model';
 export default function LaunchDomainViewDialog({ handleClose, model, }: {
     handleClose: () => void;
     model: MsaViewModel;

package/dist/components/dialogs/DomainDialog.js

@@ -2,8 +2,8 @@ import React, { useState } from 'react';
 import { Dialog } from '@jbrowse/core/ui';
 import { Tab, Tabs } from '@mui/material';
 // locals
-import InterProScanPanel from './InterProScanPanel';
-import UserProvidedResultPanel from './UserProvidedResultPanel';
+import InterProScanPanel from './InterProScanDialog';
+import UserProvidedResultPanel from './UserProvidedDomainsDialog';
 import TabPanel from './TabPanel';
 export default function LaunchDomainViewDialog({ handleClose, model, }) {
     const [choice, setChoice] = useState(0);

package/dist/components/dialogs/DomainDialog.js.map

@@ -1 +1 @@
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+{"version":3,"file":"DomainDialog.js","sourceRoot":"","sources":["../../../src/components/dialogs/DomainDialog.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,QAAQ,EAAE,MAAM,OAAO,CAAA;AACvC,OAAO,EAAE,MAAM,EAAE,MAAM,kBAAkB,CAAA;AACzC,OAAO,EAAE,GAAG,EAAE,IAAI,EAAE,MAAM,eAAe,CAAA;AAEzC,SAAS;AACT,OAAO,iBAAiB,MAAM,sBAAsB,CAAA;AACpD,OAAO,uBAAuB,MAAM,6BAA6B,CAAA;AACjE,OAAO,QAAQ,MAAM,YAAY,CAAA;AAGjC,MAAM,CAAC,OAAO,UAAU,sBAAsB,CAAC,EAC7C,WAAW,EACX,KAAK,GAIN;IACC,MAAM,CAAC,MAAM,EAAE,SAAS,CAAC,GAAG,QAAQ,CAAC,CAAC,CAAC,CAAA;IACvC,OAAO,CACL,oBAAC,MAAM,IACL,QAAQ,EAAC,IAAI,EACb,KAAK,EAAC,qBAAqB,EAC3B,OAAO,EAAE,GAAG,EAAE,CAAC,WAAW,EAAE,EAC5B,IAAI;QAEJ,oBAAC,IAAI,IAAC,KAAK,EAAE,MAAM,EAAE,QAAQ,EAAE,CAAC,CAAC,EAAE,GAAG,EAAE,EAAE,CAAC,SAAS,CAAC,GAAG,CAAC;YACvD,oBAAC,GAAG,IAAC,KAAK,EAAE,CAAC,EAAE,KAAK,EAAC,kBAAkB,GAAG;YAC1C,oBAAC,GAAG,IAAC,KAAK,EAAE,CAAC,EAAE,KAAK,EAAC,QAAQ,GAAG,CAC3B;QACP,oBAAC,QAAQ,IAAC,KAAK,EAAE,MAAM,EAAE,KAAK,EAAE,CAAC;YAC/B,oBAAC,iBAAiB,IAAC,KAAK,EAAE,KAAK,EAAE,WAAW,EAAE,WAAW,GAAI,CACpD;QACX,oBAAC,QAAQ,IAAC,KAAK,EAAE,MAAM,EAAE,KAAK,EAAE,CAAC;YAC/B,oBAAC,uBAAuB,IAAC,KAAK,EAAE,KAAK,EAAE,WAAW,EAAE,WAAW,GAAI,CAC1D,CACJ,CACV,CAAA;AACH,CAAC"}

package/dist/components/dialogs/ExportSVGDialog.d.ts

@@ -1,5 +1,5 @@
 import React from 'react';
-import { MsaViewModel } from '../../model';
+import type { MsaViewModel } from '../../model';
 export default function ExportSVGDialog({ model, onClose, }: {
     model: MsaViewModel;
     onClose: () => void;

package/dist/components/dialogs/FeatureDialog.d.ts

@@ -1,5 +1,5 @@
 import React from 'react';
-import { MsaViewModel } from '../../model';
+import type { MsaViewModel } from '../../model';
 declare const FeatureTypeDialog: ({ onClose, model, }: {
     onClose: () => void;
     model: MsaViewModel;

package/dist/components/dialogs/FeatureDialog.js.map

@@ -1 +1 @@
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package/dist/components/dialogs/{InterProScanPanel.d.ts → InterProScanDialog.d.ts}

@@ -1,5 +1,5 @@
 import React from 'react';
-import { MsaViewModel } from '../../model';
+import type { MsaViewModel } from '../../model';
 declare const InterProScanDialog: ({ handleClose, model, }: {
     handleClose: () => void;
     model: MsaViewModel;

package/dist/components/dialogs/{InterProScanPanel.js → InterProScanDialog.js}

@@ -3,6 +3,7 @@ import { observer } from 'mobx-react';
 import { Button, DialogActions, DialogContent, Typography } from '@mui/material';
 import { getSession } from '@jbrowse/core/util';
 import { launchInterProScan } from '../../launchInterProScan';
+import { Dialog } from '@jbrowse/core/ui';
 const InterProScanDialog = observer(function ({ handleClose, model, }) {
     const [vals, setVals] = useState([
         {
@@ -132,9 +133,9 @@ const InterProScanDialog = observer(function ({ handleClose, model, }) {
     ]);
     const programs = vals.filter(e => e.checked).map(e => e.name);
     const [show, setShow] = useState(false);
-    return (React.createElement(React.Fragment, null,
+    return (React.createElement(Dialog, { maxWidth: "xl", title: "Query InterProScan API for domains", onClose: () => handleClose(), open: true },
         React.createElement(DialogContent, null,
-            React.createElement(Typography, null, "This will run InterProScan on all rows of the current MSA"),
+            React.createElement(Typography, null, "This will run InterProScan via the InterProScan API on all rows of the current MSA"),
             React.createElement(Button, { onClick: () => setShow(!show) },
                 show ? 'Hide' : 'Show',
                 " advanced options"),
@@ -188,4 +189,4 @@ const InterProScanDialog = observer(function ({ handleClose, model, }) {
                 } }, "Send sequences to InterProScan"))));
 });
 export default InterProScanDialog;
-//# sourceMappingURL=InterProScanPanel.js.map
+//# sourceMappingURL=InterProScanDialog.js.map

package/dist/components/dialogs/InterProScanDialog.js.map

@@ -0,0 +1 @@
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package/dist/components/dialogs/MetadataDialog.d.ts

@@ -1,5 +1,5 @@
 import React from 'react';
-import { MsaViewModel } from '../../model';
+import type { MsaViewModel } from '../../model';
 declare const MetadataDialog: ({ model, onClose, }: {
     model: MsaViewModel;
     onClose: () => void;

package/dist/components/dialogs/SettingsDialog.d.ts

@@ -1,5 +1,5 @@
 import React from 'react';
-import { MsaViewModel } from '../../model';
+import type { MsaViewModel } from '../../model';
 declare const SettingsDialog: ({ model, onClose, }: {
     model: MsaViewModel;
     onClose: () => void;

package/dist/components/dialogs/SettingsDialog.js

@@ -39,10 +39,13 @@ const TreeSettings = observer(function TreeSettings({ model, }) {
 });
 const MSASettings = observer(function MSASettings({ model, }) {
     const { classes } = useStyles();
-    const { bgColor, colWidth, colorSchemeName, rowHeight } = model;
+    const { bgColor, contrastLettering, colWidth, allowedGappyness, drawMsaLetters, colorSchemeName, hideGaps, rowHeight, } = model;
     return (React.createElement("div", null,
         React.createElement("h1", null, "MSA options"),
+        React.createElement(Checkbox2, { checked: drawMsaLetters, onChange: () => model.setDrawMsaLetters(!drawMsaLetters), label: "Draw letters" }),
         React.createElement(Checkbox2, { checked: bgColor, onChange: () => model.setBgColor(!bgColor), label: "Color background tiles of MSA?" }),
+        React.createElement(Checkbox2, { checked: contrastLettering, onChange: () => model.setContrastLettering(!contrastLettering), label: "Use contrast lettering" }),
+        React.createElement(Checkbox2, { checked: hideGaps, onChange: () => model.setHideGaps(!hideGaps), label: `Hide columns that are ${100 - allowedGappyness}% gaps` }),
         React.createElement("div", { className: classes.flex },
             React.createElement(Typography, null,
                 "Column width (",
@@ -55,6 +58,12 @@ const MSASettings = observer(function MSASettings({ model, }) {
                 rowHeight,
                 "px)"),
             React.createElement(Slider, { className: classes.field, min: 1, max: 50, value: rowHeight, onChange: (_, val) => model.setRowHeight(val) })),
+        hideGaps ? (React.createElement("div", { className: classes.flex },
+            React.createElement(Typography, null,
+                "Allowed gappyness (",
+                100 - allowedGappyness,
+                "%)"),
+            React.createElement(Slider, { className: classes.field, min: 1, max: 100, value: allowedGappyness, onChange: (_, val) => model.setAllowedGappyness(val) }))) : null,
         React.createElement(TextField, { select: true, label: "Color scheme", value: colorSchemeName, onChange: event => model.setColorSchemeName(event.target.value) }, Object.keys(colorSchemes).map(option => (React.createElement(MenuItem, { key: option, value: option }, option))))));
 });
 const SettingsDialog = observer(function ({ model, onClose, }) {

package/dist/components/dialogs/SettingsDialog.js.map

@@ -1 +1 @@
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package/dist/components/dialogs/TracklistDialog.d.ts

@@ -1,5 +1,5 @@
 import React from 'react';
-import { MsaViewModel } from '../../model';
+import type { MsaViewModel } from '../../model';
 declare const _default: ({ model, onClose, }: {
     model: MsaViewModel;
     onClose: () => void;

package/dist/components/dialogs/UserProvidedDomainsDialog.d.ts

@@ -0,0 +1,7 @@
+import React from 'react';
+import type { MsaViewModel } from '../../model';
+declare const UserProvidedDomainsDialog: ({ handleClose, model, }: {
+    handleClose: () => void;
+    model: MsaViewModel;
+}) => React.JSX.Element;
+export default UserProvidedDomainsDialog;

package/dist/components/dialogs/UserProvidedDomainsDialog.js

@@ -0,0 +1,58 @@
+import React, { useState } from 'react';
+import { observer } from 'mobx-react';
+import { Button, DialogActions, DialogContent, FormControlLabel, FormControl, Radio, RadioGroup, TextField, Typography, } from '@mui/material';
+import { getSession } from '@jbrowse/core/util';
+import { Dialog } from '@jbrowse/core/ui';
+import { jsonfetch } from '../../fetchUtils';
+const UserProvidedDomainsDialog = observer(function ({ handleClose, model, }) {
+    const [file, setFile] = useState();
+    const [choice, setChoice] = useState('file');
+    const [interProURL, setInterProURL] = useState('');
+    return (React.createElement(Dialog, { maxWidth: "xl", title: "Open protein domains from file", onClose: () => handleClose(), open: true },
+        React.createElement(DialogContent, null,
+            React.createElement("div", null,
+                React.createElement(Typography, null, "Open a JSON file of InterProScan results that you run remotely on EBI servers or locally"),
+                React.createElement("div", { style: { display: 'flex', margin: 30 } },
+                    React.createElement(FormControl, { component: "fieldset" },
+                        React.createElement(RadioGroup, { value: choice, onChange: event => setChoice(event.target.value) },
+                            React.createElement(FormControlLabel, { value: "url", control: React.createElement(Radio, null), label: "URL" }),
+                            React.createElement(FormControlLabel, { value: "file", control: React.createElement(Radio, null), label: "File" }))),
+                    choice === 'url' ? (React.createElement("div", null,
+                        React.createElement(Typography, null, "Open a InterProScan JSON file remote URL"),
+                        React.createElement(TextField, { label: "URL", value: interProURL, onChange: event => setInterProURL(event.target.value) }))) : null,
+                    choice === 'file' ? (React.createElement("div", { style: { paddingTop: 20 } },
+                        React.createElement(Typography, null, "Open a InterProScan JSON file file from your local drive"),
+                        React.createElement(Button, { variant: "outlined", component: "label" },
+                            "Choose File",
+                            React.createElement("input", { type: "file", hidden: true, onChange: ({ target }) => {
+                                    const file = target?.files?.[0];
+                                    if (file) {
+                                        setFile(file);
+                                    }
+                                } })))) : null))),
+        React.createElement(DialogActions, null,
+            React.createElement(Button, { variant: "contained", color: "primary", onClick: () => {
+                    // eslint-disable-next-line @typescript-eslint/no-floating-promises
+                    ;
+                    (async () => {
+                        try {
+                            const ret = file
+                                ? JSON.parse(await file.text())
+                                : await jsonfetch(interProURL);
+                            model.setInterProAnnotations(Object.fromEntries(ret.results.map(r => [r.xref[0].id, r])));
+                            model.setShowDomains(true);
+                            getSession(model).notify('Loaded interproscan results', 'success');
+                        }
+                        catch (e) {
+                            console.error(e);
+                            getSession(model).notifyError(`${e}`, e);
+                        }
+                        finally {
+                            model.setStatus();
+                        }
+                    })();
+                    handleClose();
+                } }, "Open results"))));
+});
+export default UserProvidedDomainsDialog;
+//# sourceMappingURL=UserProvidedDomainsDialog.js.map

package/dist/components/dialogs/UserProvidedDomainsDialog.js.map

@@ -0,0 +1 @@
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package/dist/components/header/Header.d.ts

@@ -1,5 +1,5 @@
 import React from 'react';
-import { MsaViewModel } from '../../model';
+import type { MsaViewModel } from '../../model';
 declare const Header: ({ model }: {
     model: MsaViewModel;
 }) => React.JSX.Element;