react-msaview 2.0.0 → 2.1.0

package/dist/components/MSABlock.js

@@ -0,0 +1,103 @@
+import React, { useEffect, useRef, useMemo } from 'react';
+import { useTheme } from '@mui/material';
+import { observer } from 'mobx-react';
+import { colorContrast } from '../util';
+import { getClustalXColor, getPercentIdentityColor } from '../colorSchemes';
+const MSABlock = observer(function ({ model, offsetX, offsetY, }) {
+    const { MSA, colWidth, bgColor, columns, rowHeight, scrollY, scrollX, hierarchy, colorScheme, colorSchemeName, blockSize, highResScaleFactor, colStats, } = model;
+    const theme = useTheme();
+    const contrastScheme = useMemo(() => colorContrast(colorScheme, theme), [colorScheme, theme]);
+    const ref = useRef(null);
+    useEffect(() => {
+        var _a, _b;
+        if (!ref.current) {
+            return;
+        }
+        const ctx = ref.current.getContext('2d');
+        if (!ctx) {
+            return;
+        }
+        ctx.resetTransform();
+        ctx.scale(highResScaleFactor, highResScaleFactor);
+        ctx.clearRect(0, 0, blockSize, blockSize);
+        ctx.translate(-offsetX, rowHeight / 2 - offsetY);
+        ctx.textAlign = 'center';
+        ctx.font = ctx.font.replace(/\d+px/, `${Math.max(8, rowHeight - 8)}px`);
+        const leaves = hierarchy.leaves();
+        const b = blockSize;
+        // slice vertical rows, e.g. tree leaves, avoid negative slice
+        const yStart = Math.max(0, Math.floor((offsetY - rowHeight) / rowHeight));
+        const yEnd = Math.max(0, Math.ceil((offsetY + b + rowHeight) / rowHeight));
+        // slice horizontal visible letters, avoid negative slice
+        const xStart = Math.max(0, Math.floor(offsetX / colWidth));
+        const xEnd = Math.max(0, Math.ceil((offsetX + b) / colWidth));
+        const visibleLeaves = leaves.slice(yStart, yEnd);
+        for (const node of visibleLeaves) {
+            const { 
+            // @ts-expect-error
+            x: y, data: { name }, } = node;
+            const str = (_a = columns[name]) === null || _a === void 0 ? void 0 : _a.slice(xStart, xEnd);
+            for (let i = 0; i < (str === null || str === void 0 ? void 0 : str.length); i++) {
+                const letter = str[i];
+                const color = colorSchemeName === 'clustalx_protein_dynamic'
+                    ? getClustalXColor(colStats[xStart + i], model, name, xStart + i)
+                    : colorSchemeName === 'percent_identity_dynamic'
+                        ? getPercentIdentityColor(colStats[xStart + i], model, name, xStart + i)
+                        : colorScheme[letter.toUpperCase()];
+                if (bgColor) {
+                    const x = i * colWidth + offsetX - (offsetX % colWidth);
+                    ctx.fillStyle = color || 'white';
+                    ctx.fillRect(x, y - rowHeight, colWidth, rowHeight);
+                }
+            }
+        }
+        if (rowHeight >= 5 && colWidth > rowHeight / 2) {
+            for (const node of visibleLeaves) {
+                const { 
+                // @ts-expect-error
+                x: y, data: { name }, } = node;
+                const str = (_b = columns[name]) === null || _b === void 0 ? void 0 : _b.slice(xStart, xEnd);
+                for (let i = 0; i < (str === null || str === void 0 ? void 0 : str.length); i++) {
+                    const letter = str[i];
+                    const color = colorScheme[letter.toUpperCase()];
+                    const contrast = contrastScheme[letter.toUpperCase()] || 'black';
+                    const x = i * colWidth + offsetX - (offsetX % colWidth);
+                    // note: -rowHeight/4 matches +rowHeight/4 in tree
+                    ctx.fillStyle = bgColor ? contrast : color || 'black';
+                    ctx.fillText(letter, x + colWidth / 2, y - rowHeight / 4);
+                }
+            }
+        }
+        // eslint-disable-next-line react-hooks/exhaustive-deps
+    }, [
+        MSA,
+        highResScaleFactor,
+        columns,
+        colorScheme,
+        contrastScheme,
+        bgColor,
+        rowHeight,
+        colWidth,
+        hierarchy,
+        offsetX,
+        offsetY,
+        blockSize,
+    ]);
+    return (React.createElement("canvas", { ref: ref, onMouseMove: event => {
+            if (!ref.current) {
+                return;
+            }
+            const { left, top } = ref.current.getBoundingClientRect();
+            const mouseX = event.clientX - left + offsetX;
+            const mouseY = event.clientY - top + offsetY;
+            model.setMousePos(Math.floor(mouseX / colWidth) + 1, Math.floor(mouseY / rowHeight));
+        }, onMouseLeave: () => model.setMousePos(), width: blockSize * highResScaleFactor, height: blockSize * highResScaleFactor, style: {
+            position: 'absolute',
+            top: scrollY + offsetY,
+            left: scrollX + offsetX,
+            width: blockSize,
+            height: blockSize,
+        } }));
+});
+export default MSABlock;
+//# sourceMappingURL=MSABlock.js.map

package/dist/components/MSABlock.js.map

@@ -0,0 +1 @@
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package/dist/components/MSACanvas.d.ts

@@ -1,5 +1,6 @@
+import React from 'react';
 import { MsaViewModel } from '../model';
 declare const MSACanvas: ({ model }: {
     model: MsaViewModel;
-}) => JSX.Element;
+}) => React.JSX.Element;
 export default MSACanvas;

package/dist/components/MSACanvas.js

@@ -1,106 +1,8 @@
-import React, { useEffect, useState, useRef, useMemo } from 'react';
-import { Typography, CircularProgress, useTheme } from '@mui/material';
+import React, { useEffect, useState, useRef } from 'react';
+import { Typography, CircularProgress } from '@mui/material';
 import { observer } from 'mobx-react';
 import normalizeWheel from 'normalize-wheel';
-import { colorContrast } from '../util';
-import { getClustalXColor, getPercentIdentityColor } from '../colorSchemes';
-const MSABlock = observer(function ({ model, offsetX, offsetY, }) {
-    const { MSA, colWidth, bgColor, columns, rowHeight, scrollY, scrollX, hierarchy, colorScheme, colorSchemeName, blockSize, highResScaleFactor, colStats, } = model;
-    const theme = useTheme();
-    const contrastScheme = useMemo(() => colorContrast(colorScheme, theme), [colorScheme, theme]);
-    const ref = useRef(null);
-    useEffect(() => {
-        if (!ref.current) {
-            return;
-        }
-        const ctx = ref.current.getContext('2d');
-        if (!ctx) {
-            return;
-        }
-        ctx.resetTransform();
-        ctx.scale(highResScaleFactor, highResScaleFactor);
-        ctx.clearRect(0, 0, blockSize, blockSize);
-        ctx.translate(-offsetX, rowHeight / 2 - offsetY);
-        ctx.textAlign = 'center';
-        ctx.font = ctx.font.replace(/\d+px/, `${Math.max(8, rowHeight - 8)}px`);
-        const leaves = hierarchy.leaves();
-        const b = blockSize;
-        // slice vertical rows, e.g. tree leaves, avoid negative slice
-        const yStart = Math.max(0, Math.floor((offsetY - rowHeight) / rowHeight));
-        const yEnd = Math.max(0, Math.ceil((offsetY + b + rowHeight) / rowHeight));
-        // slice horizontal visible letters, avoid negative slice
-        const xStart = Math.max(0, Math.floor(offsetX / colWidth));
-        const xEnd = Math.max(0, Math.ceil((offsetX + b) / colWidth));
-        const visibleLeaves = leaves.slice(yStart, yEnd);
-        visibleLeaves.forEach(node => {
-            var _a;
-            const { 
-            // @ts-expect-error
-            x: y, data: { name }, } = node;
-            const str = (_a = columns[name]) === null || _a === void 0 ? void 0 : _a.slice(xStart, xEnd);
-            for (let i = 0; i < (str === null || str === void 0 ? void 0 : str.length); i++) {
-                const letter = str[i];
-                const color = colorSchemeName === 'clustalx_protein_dynamic'
-                    ? getClustalXColor(colStats[xStart + i], model, name, xStart + i)
-                    : colorSchemeName === 'percent_identity_dynamic'
-                        ? getPercentIdentityColor(colStats[xStart + i], model, name, xStart + i)
-                        : colorScheme[letter.toUpperCase()];
-                if (bgColor) {
-                    const x = i * colWidth + offsetX - (offsetX % colWidth);
-                    ctx.fillStyle = color || 'white';
-                    ctx.fillRect(x, y - rowHeight, colWidth, rowHeight);
-                }
-            }
-        });
-        if (rowHeight >= 10 && colWidth >= rowHeight / 2) {
-            visibleLeaves.forEach(node => {
-                var _a;
-                const { 
-                // @ts-expect-error
-                x: y, data: { name }, } = node;
-                const str = (_a = columns[name]) === null || _a === void 0 ? void 0 : _a.slice(xStart, xEnd);
-                for (let i = 0; i < (str === null || str === void 0 ? void 0 : str.length); i++) {
-                    const letter = str[i];
-                    const color = colorScheme[letter.toUpperCase()];
-                    const contrast = contrastScheme[letter.toUpperCase()] || 'black';
-                    const x = i * colWidth + offsetX - (offsetX % colWidth);
-                    // note: -rowHeight/4 matches +rowHeight/4 in tree
-                    ctx.fillStyle = bgColor ? contrast : color || 'black';
-                    ctx.fillText(letter, x + colWidth / 2, y - rowHeight / 4);
-                }
-            });
-        }
-        // eslint-disable-next-line react-hooks/exhaustive-deps
-    }, [
-        MSA,
-        highResScaleFactor,
-        columns,
-        colorScheme,
-        contrastScheme,
-        bgColor,
-        rowHeight,
-        colWidth,
-        hierarchy,
-        offsetX,
-        offsetY,
-        blockSize,
-    ]);
-    return (React.createElement("canvas", { ref: ref, onMouseMove: event => {
-            if (!ref.current) {
-                return;
-            }
-            const { left, top } = ref.current.getBoundingClientRect();
-            const mouseX = event.clientX - left;
-            const mouseY = event.clientY - top;
-            model.setMousePos(Math.floor((mouseX + offsetX) / colWidth) + 1, Math.floor((mouseY + offsetY) / rowHeight));
-        }, onMouseLeave: () => model.setMousePos(), width: blockSize * highResScaleFactor, height: blockSize * highResScaleFactor, style: {
-            position: 'absolute',
-            top: scrollY + offsetY,
-            left: scrollX + offsetX,
-            width: blockSize,
-            height: blockSize,
-        } }));
-});
+import MSABlock from './MSABlock';
 const MSACanvas = observer(function ({ model }) {
     const { MSA, msaFilehandle, height, msaAreaWidth, blocks2d } = model;
     const ref = useRef(null);

package/dist/components/MSACanvas.js.map

@@ -1 +1 @@
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package/dist/components/MSAMouseoverCanvas.d.ts

@@ -0,0 +1,6 @@
+import React from 'react';
+import { MsaViewModel } from '../model';
+declare const MSAMouseoverCanvas: ({ model, }: {
+    model: MsaViewModel;
+}) => React.JSX.Element;
+export default MSAMouseoverCanvas;

package/dist/components/MSAMouseoverCanvas.js

@@ -0,0 +1,52 @@
+import React, { useEffect, useRef } from 'react';
+import { observer } from 'mobx-react';
+import { sum } from '@jbrowse/core/util';
+const MSAMouseoverCanvas = observer(function ({ model, }) {
+    const ref = useRef(null);
+    const { height, width, treeAreaWidth, resizeHandleWidth, rulerHeight, turnedOnTracks, scrollX, scrollY, mouseCol, mouseRow, rowHeight, colWidth, } = model;
+    const totalTrackAreaHeight = sum(turnedOnTracks.map(r => r.model.height));
+    useEffect(() => {
+        if (!ref.current) {
+            return;
+        }
+        const ctx = ref.current.getContext('2d');
+        if (!ctx) {
+            return;
+        }
+        ctx.resetTransform();
+        ctx.clearRect(0, 0, width, height);
+        ctx.fillStyle = 'rgba(0,0,0,0.15)';
+        if (mouseCol !== undefined) {
+            const x = (mouseCol - 1) * colWidth + scrollX + treeAreaWidth + resizeHandleWidth;
+            ctx.fillRect(x, 0, colWidth, height);
+        }
+        if (mouseRow !== undefined) {
+            const y = mouseRow * rowHeight + scrollY + rulerHeight + totalTrackAreaHeight;
+            ctx.fillRect(treeAreaWidth + resizeHandleWidth, y, width, rowHeight);
+        }
+    }, [
+        mouseCol,
+        colWidth,
+        scrollY,
+        totalTrackAreaHeight,
+        mouseRow,
+        rowHeight,
+        rulerHeight,
+        scrollX,
+        height,
+        resizeHandleWidth,
+        treeAreaWidth,
+        width,
+    ]);
+    return (React.createElement("canvas", { ref: ref, width: width, height: height, style: {
+            position: 'absolute',
+            top: 0,
+            left: 0,
+            width,
+            height,
+            zIndex: 1000,
+            pointerEvents: 'none',
+        } }));
+});
+export default MSAMouseoverCanvas;
+//# sourceMappingURL=MSAMouseoverCanvas.js.map

package/dist/components/MSAMouseoverCanvas.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"MSAMouseoverCanvas.js","sourceRoot":"","sources":["../../src/components/MSAMouseoverCanvas.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,SAAS,EAAE,MAAM,EAAE,MAAM,OAAO,CAAA;AAChD,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AAIrC,OAAO,EAAE,GAAG,EAAE,MAAM,oBAAoB,CAAA;AAExC,MAAM,kBAAkB,GAAG,QAAQ,CAAC,UAAU,EAC5C,KAAK,GAGN;IACC,MAAM,GAAG,GAAG,MAAM,CAAoB,IAAI,CAAC,CAAA;IAC3C,MAAM,EACJ,MAAM,EACN,KAAK,EACL,aAAa,EACb,iBAAiB,EACjB,WAAW,EACX,cAAc,EACd,OAAO,EACP,OAAO,EACP,QAAQ,EACR,QAAQ,EACR,SAAS,EACT,QAAQ,GACT,GAAG,KAAK,CAAA;IACT,MAAM,oBAAoB,GAAG,GAAG,CAAC,cAAc,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,KAAK,CAAC,MAAM,CAAC,CAAC,CAAA;IACzE,SAAS,CAAC,GAAG,EAAE;QACb,IAAI,CAAC,GAAG,CAAC,OAAO,EAAE;YAChB,OAAM;SACP;QAED,MAAM,GAAG,GAAG,GAAG,CAAC,OAAO,CAAC,UAAU,CAAC,IAAI,CAAC,CAAA;QACxC,IAAI,CAAC,GAAG,EAAE;YACR,OAAM;SACP;QAED,GAAG,CAAC,cAAc,EAAE,CAAA;QACpB,GAAG,CAAC,SAAS,CAAC,CAAC,EAAE,CAAC,EAAE,KAAK,EAAE,MAAM,CAAC,CAAA;QAElC,GAAG,CAAC,SAAS,GAAG,kBAAkB,CAAA;QAClC,IAAI,QAAQ,KAAK,SAAS,EAAE;YAC1B,MAAM,CAAC,GACL,CAAC,QAAQ,GAAG,CAAC,CAAC,GAAG,QAAQ,GAAG,OAAO,GAAG,aAAa,GAAG,iBAAiB,CAAA;YAEzE,GAAG,CAAC,QAAQ,CAAC,CAAC,EAAE,CAAC,EAAE,QAAQ,EAAE,MAAM,CAAC,CAAA;SACrC;QACD,IAAI,QAAQ,KAAK,SAAS,EAAE;YAC1B,MAAM,CAAC,GACL,QAAQ,GAAG,SAAS,GAAG,OAAO,GAAG,WAAW,GAAG,oBAAoB,CAAA;YACrE,GAAG,CAAC,QAAQ,CAAC,aAAa,GAAG,iBAAiB,EAAE,CAAC,EAAE,KAAK,EAAE,SAAS,CAAC,CAAA;SACrE;IACH,CAAC,EAAE;QACD,QAAQ;QACR,QAAQ;QACR,OAAO;QACP,oBAAoB;QACpB,QAAQ;QACR,SAAS;QACT,WAAW;QACX,OAAO;QACP,MAAM;QACN,iBAAiB;QACjB,aAAa;QACb,KAAK;KACN,CAAC,CAAA;IAEF,OAAO,CACL,gCACE,GAAG,EAAE,GAAG,EACR,KAAK,EAAE,KAAK,EACZ,MAAM,EAAE,MAAM,EACd,KAAK,EAAE;YACL,QAAQ,EAAE,UAAU;YACpB,GAAG,EAAE,CAAC;YACN,IAAI,EAAE,CAAC;YACP,KAAK;YACL,MAAM;YACN,MAAM,EAAE,IAAI;YACZ,aAAa,EAAE,MAAM;SACtB,GACD,CACH,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,eAAe,kBAAkB,CAAA"}

package/dist/components/MSAView.d.ts

@@ -1,5 +1,6 @@
+import React from 'react';
 import { MsaViewModel } from '../model';
 declare const _default: ({ model }: {
     model: MsaViewModel;
-}) => JSX.Element;
+}) => React.JSX.Element;
 export default _default;

package/dist/components/MSAView.js

@@ -1,4 +1,4 @@
-import React, { useRef, useEffect } from 'react';
+import React, { lazy, Suspense } from 'react';
 import { observer } from 'mobx-react';
 import { Typography } from '@mui/material';
 // locals
@@ -10,37 +10,9 @@ import Ruler from './Ruler';
 import TreeRuler from './TreeRuler';
 import Header from './Header';
 import Track from './Track';
-import AnnotationDialog from './AnnotationDlg';
 import { HorizontalResizeHandle, VerticalResizeHandle } from './ResizeHandles';
-const MouseoverCanvas = observer(function ({ model }) {
-    const ref = useRef(null);
-    const { height, width, treeAreaWidth, resizeHandleWidth, scrollX, mouseCol, colWidth, } = model;
-    useEffect(() => {
-        if (!ref.current) {
-            return;
-        }
-        const ctx = ref.current.getContext('2d');
-        if (!ctx) {
-            return;
-        }
-        ctx.resetTransform();
-        ctx.clearRect(0, 0, width, height);
-        if (mouseCol !== undefined) {
-            const x = (mouseCol - 1) * colWidth + scrollX + treeAreaWidth + resizeHandleWidth;
-            ctx.fillStyle = 'rgba(100,100,100,0.5)';
-            ctx.fillRect(x, 0, colWidth, height);
-        }
-    }, [mouseCol, colWidth, scrollX, height, resizeHandleWidth, treeAreaWidth, width]);
-    return (React.createElement("canvas", { ref: ref, width: width, height: height, style: {
-            position: 'absolute',
-            top: 0,
-            left: 0,
-            width,
-            height,
-            zIndex: 1000,
-            pointerEvents: 'none',
-        } }));
-});
+import MSAMouseoverCanvas from './MSAMouseoverCanvas';
+const AnnotationDialog = lazy(() => import('./dialogs/AnnotationDlg'));
 export default observer(function ({ model }) {
     const { done, initialized, treeAreaWidth, height, turnedOnTracks } = model;
     return (React.createElement("div", null,
@@ -59,11 +31,13 @@ export default observer(function ({ model }) {
                                 React.createElement(TreeCanvas, { model: model })),
                             React.createElement(VerticalResizeHandle, { model: model }),
                             React.createElement(MSACanvas, { model: model }),
-                            React.createElement(MouseoverCanvas, { model: model }))))),
+                            React.createElement(MSAMouseoverCanvas, { model: model }))))),
             React.createElement(HorizontalResizeHandle, { model: model }))),
-        model.DialogComponent ? (React.createElement(model.DialogComponent, { ...(model.DialogProps || {}), onClose: () => {
-                model.setDialogComponent(undefined, undefined);
-            } })) : null,
-        model.annotPos ? (React.createElement(AnnotationDialog, { data: model.annotPos, model: model, onClose: () => model.clearAnnotPos() })) : null));
+        model.DialogComponent ? (React.createElement(Suspense, { fallback: null },
+            React.createElement(model.DialogComponent, { ...(model.DialogProps || {}), onClose: () => {
+                    model.setDialogComponent(undefined, undefined);
+                } }))) : null,
+        model.annotPos ? (React.createElement(Suspense, { fallback: null },
+            React.createElement(AnnotationDialog, { data: model.annotPos, model: model, onClose: () => model.clearAnnotPos() }))) : null));
 });
 //# sourceMappingURL=MSAView.js.map

package/dist/components/MSAView.js.map

@@ -1 +1 @@
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+{"version":3,"file":"MSAView.js","sourceRoot":"","sources":["../../src/components/MSAView.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,IAAI,EAAE,QAAQ,EAAE,MAAM,OAAO,CAAA;AAE7C,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AACrC,OAAO,EAAE,UAAU,EAAE,MAAM,eAAe,CAAA;AAE1C,SAAS;AACT,OAAO,UAAU,MAAM,cAAc,CAAA;AACrC,OAAO,UAAU,MAAM,cAAc,CAAA;AACrC,OAAO,UAAU,MAAM,cAAc,CAAA;AACrC,OAAO,SAAS,MAAM,aAAa,CAAA;AACnC,OAAO,KAAK,MAAM,SAAS,CAAA;AAC3B,OAAO,SAAS,MAAM,aAAa,CAAA;AACnC,OAAO,MAAM,MAAM,UAAU,CAAA;AAC7B,OAAO,KAAK,MAAM,SAAS,CAAA;AAE3B,OAAO,EAAE,sBAAsB,EAAE,oBAAoB,EAAE,MAAM,iBAAiB,CAAA;AAE9E,OAAO,kBAAkB,MAAM,sBAAsB,CAAA;AAErD,MAAM,gBAAgB,GAAG,IAAI,CAAC,GAAG,EAAE,CAAC,MAAM,CAAC,yBAAyB,CAAC,CAAC,CAAA;AAEtE,eAAe,QAAQ,CAAC,UAAU,EAAE,KAAK,EAA2B;IAClE,MAAM,EAAE,IAAI,EAAE,WAAW,EAAE,aAAa,EAAE,MAAM,EAAE,cAAc,EAAE,GAAG,KAAK,CAAA;IAE1E,OAAO,CACL;QACG,CAAC,WAAW,CAAC,CAAC,CAAC,CACd,oBAAC,UAAU,IAAC,KAAK,EAAE,KAAK,GAAI,CAC7B,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CACV,oBAAC,UAAU,IAAC,OAAO,EAAC,IAAI,iBAAwB,CACjD,CAAC,CAAC,CAAC,CACF;YACE,6BAAK,KAAK,EAAE,EAAE,MAAM,EAAE,QAAQ,EAAE,QAAQ,EAAE;gBACxC,oBAAC,MAAM,IAAC,KAAK,EAAE,KAAK,GAAI;gBACxB;oBACE,6BAAK,KAAK,EAAE,EAAE,QAAQ,EAAE,UAAU,EAAE;wBAClC,6BAAK,KAAK,EAAE,EAAE,OAAO,EAAE,MAAM,EAAE;4BAC7B,6BAAK,KAAK,EAAE,EAAE,UAAU,EAAE,CAAC,EAAE,KAAK,EAAE,aAAa,EAAE;gCACjD,oBAAC,SAAS,IAAC,KAAK,EAAE,KAAK,GAAI,CACvB;4BAEN,oBAAC,UAAU,IACT,KAAK,EAAE,KAAK,EACZ,gBAAgB,EAAE,oBAAC,KAAK,IAAC,KAAK,EAAE,KAAK,GAAI,GACzC,CACE,EACL,cAAc,aAAd,cAAc;wBAAd,cAAc,CAAE,GAAG,CAAC,KAAK,CAAC,EAAE,CAAC,CAC5B,oBAAC,KAAK,IAAC,GAAG,EAAE,KAAK,CAAC,KAAK,CAAC,EAAE,EAAE,KAAK,EAAE,KAAK,EAAE,KAAK,EAAE,KAAK,GAAI,CAC3D,CAAC;wBAEF,6BAAK,KAAK,EAAE,EAAE,OAAO,EAAE,MAAM,EAAE;4BAC7B,6BAAK,KAAK,EAAE,EAAE,UAAU,EAAE,CAAC,EAAE,KAAK,EAAE,aAAa,EAAE;gCACjD,oBAAC,UAAU,IAAC,KAAK,EAAE,KAAK,GAAI,CACxB;4BACN,oBAAC,oBAAoB,IAAC,KAAK,EAAE,KAAK,GAAI;4BACtC,oBAAC,SAAS,IAAC,KAAK,EAAE,KAAK,GAAI;4BAC3B,oBAAC,kBAAkB,IAAC,KAAK,EAAE,KAAK,GAAI,CAChC,CACF,CACF,CACF;YACN,oBAAC,sBAAsB,IAAC,KAAK,EAAE,KAAK,GAAI,CACpC,CACP;QAEA,KAAK,CAAC,eAAe,CAAC,CAAC,CAAC,CACvB,oBAAC,QAAQ,IAAC,QAAQ,EAAE,IAAI;YACtB,oBAAC,KAAK,CAAC,eAAe,OAChB,CAAC,KAAK,CAAC,WAAW,IAAI,EAAE,CAAC,EAC7B,OAAO,EAAE,GAAG,EAAE;oBACZ,KAAK,CAAC,kBAAkB,CAAC,SAAS,EAAE,SAAS,CAAC,CAAA;gBAChD,CAAC,GACD,CACO,CACZ,CAAC,CAAC,CAAC,IAAI;QAEP,KAAK,CAAC,QAAQ,CAAC,CAAC,CAAC,CAChB,oBAAC,QAAQ,IAAC,QAAQ,EAAE,IAAI;YACtB,oBAAC,gBAAgB,IACf,IAAI,EAAE,KAAK,CAAC,QAAQ,EACpB,KAAK,EAAE,KAAK,EACZ,OAAO,EAAE,GAAG,EAAE,CAAC,KAAK,CAAC,aAAa,EAAE,GACpC,CACO,CACZ,CAAC,CAAC,CAAC,IAAI,CACJ,CACP,CAAA;AACH,CAAC,CAAC,CAAA"}

package/dist/components/MultiAlignmentSelector.d.ts

@@ -0,0 +1,6 @@
+import React from 'react';
+import { MsaViewModel } from '../model';
+declare const MultiAlignmentSelector: ({ model, }: {
+    model: MsaViewModel;
+}) => React.JSX.Element | null;
+export default MultiAlignmentSelector;

package/dist/components/MultiAlignmentSelector.js

@@ -0,0 +1,13 @@
+import React from 'react';
+import { observer } from 'mobx-react';
+import { Select } from '@mui/material';
+const MultiAlignmentSelector = observer(function ({ model, }) {
+    const { currentAlignment, alignmentNames } = model;
+    return alignmentNames.length > 0 ? (React.createElement(Select, { native: true, value: currentAlignment, size: "small", onChange: event => {
+            model.setCurrentAlignment(+event.target.value);
+            model.setScrollX(0);
+            model.setScrollY(0);
+        } }, alignmentNames.map((option, index) => (React.createElement("option", { key: `${option}-${index}`, value: index }, option))))) : null;
+});
+export default MultiAlignmentSelector;
+//# sourceMappingURL=MultiAlignmentSelector.js.map

package/dist/components/MultiAlignmentSelector.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"MultiAlignmentSelector.js","sourceRoot":"","sources":["../../src/components/MultiAlignmentSelector.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,OAAO,CAAA;AACzB,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AACrC,OAAO,EAAE,MAAM,EAAE,MAAM,eAAe,CAAA;AAKtC,MAAM,sBAAsB,GAAG,QAAQ,CAAC,UAAU,EAChD,KAAK,GAGN;IACC,MAAM,EAAE,gBAAgB,EAAE,cAAc,EAAE,GAAG,KAAK,CAAA;IAClD,OAAO,cAAc,CAAC,MAAM,GAAG,CAAC,CAAC,CAAC,CAAC,CACjC,oBAAC,MAAM,IACL,MAAM,QACN,KAAK,EAAE,gBAAgB,EACvB,IAAI,EAAC,OAAO,EACZ,QAAQ,EAAE,KAAK,CAAC,EAAE;YAChB,KAAK,CAAC,mBAAmB,CAAC,CAAE,KAAK,CAAC,MAAM,CAAC,KAAgB,CAAC,CAAA;YAC1D,KAAK,CAAC,UAAU,CAAC,CAAC,CAAC,CAAA;YACnB,KAAK,CAAC,UAAU,CAAC,CAAC,CAAC,CAAA;QACrB,CAAC,IAEA,cAAc,CAAC,GAAG,CAAC,CAAC,MAAM,EAAE,KAAK,EAAE,EAAE,CAAC,CACrC,gCAAQ,GAAG,EAAE,GAAG,MAAM,IAAI,KAAK,EAAE,EAAE,KAAK,EAAE,KAAK,IAC5C,MAAM,CACA,CACV,CAAC,CACK,CACV,CAAC,CAAC,CAAC,IAAI,CAAA;AACV,CAAC,CAAC,CAAA;AACF,eAAe,sBAAsB,CAAA"}

package/dist/components/ResizeHandles.d.ts

@@ -1,7 +1,8 @@
+import React from 'react';
 import { MsaViewModel } from '../model';
 export declare const VerticalResizeHandle: ({ model, }: {
     model: MsaViewModel;
-}) => JSX.Element;
+}) => React.JSX.Element;
 export declare const HorizontalResizeHandle: ({ model, }: {
     model: MsaViewModel;
-}) => JSX.Element;
+}) => React.JSX.Element;

package/dist/components/Rubberband.d.ts

@@ -3,6 +3,6 @@ import { MsaViewModel } from '../model';
 declare function Rubberband({ model, ControlComponent, }: {
     model: MsaViewModel;
     ControlComponent?: React.ReactElement;
-}): JSX.Element;
+}): React.JSX.Element;
 declare const _default: typeof Rubberband;
 export default _default;

package/dist/components/Rubberband.js

@@ -112,7 +112,6 @@ function Rubberband({ model, ControlComponent = React.createElement("div", null)
         setStartX(undefined);
         setCurrentX(undefined);
     }
-    // eslint-disable-next-line @typescript-eslint/ban-types
     function handleMenuItemClick(_, callback) {
         callback();
         handleClose();

package/dist/components/Rubberband.js.map

@@ -1 +1 @@
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package/dist/components/Ruler.d.ts

@@ -1,5 +1,6 @@
+import React from 'react';
 import { MsaViewModel } from '../model';
 declare const Ruler: ({ model }: {
     model: MsaViewModel;
-}) => JSX.Element | null;
+}) => React.JSX.Element | null;
 export default Ruler;

package/dist/components/Ruler.js

@@ -29,7 +29,7 @@ function RulerBlock({ start, end, bpPerPx, reversed, major, minor, }) {
         })));
 }
 const Ruler = observer(function ({ model }) {
-    const { MSA, colWidth, msaAreaWidth, resizeHandleWidth, scrollX, blocksX, blockSize, } = model;
+    const { MSA, colWidth, msaAreaWidth, rulerHeight, resizeHandleWidth, scrollX, blocksX, blockSize, } = model;
     const ref = useRef(null);
     const offsetX = blocksX[0];
     return !MSA ? null : (React.createElement("div", { ref: ref, style: {
@@ -37,7 +37,7 @@ const Ruler = observer(function ({ model }) {
             width: msaAreaWidth,
             cursor: 'crosshair',
             overflow: 'hidden',
-            height: 20,
+            height: rulerHeight,
             background: '#ccc',
         } },
         React.createElement("svg", { style: {

package/dist/components/Ruler.js.map

@@ -1 +1 @@
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+{"version":3,"file":"Ruler.js","sourceRoot":"","sources":["../../src/components/Ruler.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,MAAM,EAAE,MAAM,OAAO,CAAA;AACrC,OAAO,EAAE,UAAU,EAAE,MAAM,eAAe,CAAA;AAC1C,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AAGrC,OAAO,EAAE,SAAS,EAAE,SAAS,EAAE,MAAM,QAAQ,CAAA;AAE7C,MAAM,SAAS,GAAG,UAAU,EAAE,CAAC;IAC7B,cAAc,EAAE;QACd,QAAQ,EAAE,MAAM;KACjB;IACD,SAAS,EAAE;QACT,MAAM,EAAE,MAAM;KACf;IACD,SAAS,EAAE;QACT,MAAM,EAAE,MAAM;KACf;CACF,CAAC,CAAA;AAEF,SAAS,UAAU,CAAC,EAClB,KAAK,EACL,GAAG,EACH,OAAO,EACP,QAAQ,EACR,KAAK,EACL,KAAK,GAQN;IACC,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAC/B,MAAM,KAAK,GAAG,SAAS,CAAC,KAAK,EAAE,GAAG,EAAE,OAAO,EAAE,KAAK,EAAE,KAAK,CAAC,CAAA;IAC1D,OAAO,CACL;QACG,KAAK,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE;YAChB,MAAM,CAAC,GAAG,CAAC,QAAQ,CAAC,CAAC,CAAC,GAAG,GAAG,IAAI,CAAC,IAAI,CAAC,CAAC,CAAC,IAAI,CAAC,IAAI,GAAG,KAAK,CAAC,GAAG,OAAO,CAAA;YACpE,OAAO,CACL,8BACE,GAAG,EAAE,IAAI,CAAC,IAAI,EACd,EAAE,EAAE,CAAC,EACL,EAAE,EAAE,CAAC,EACL,EAAE,EAAE,EAAE,EACN,EAAE,EAAE,IAAI,CAAC,IAAI,KAAK,OAAO,CAAC,CAAC,CAAC,EAAE,GAAG,CAAC,CAAC,CAAC,CAAC,EAAE,GAAG,CAAC,EAC3C,WAAW,EAAE,CAAC,EACd,MAAM,EAAE,IAAI,CAAC,IAAI,KAAK,OAAO,CAAC,CAAC,CAAC,MAAM,CAAC,CAAC,CAAC,MAAM,EAC/C,SAAS,EACP,IAAI,CAAC,IAAI,KAAK,OAAO,CAAC,CAAC,CAAC,OAAO,CAAC,SAAS,CAAC,CAAC,CAAC,OAAO,CAAC,SAAS,aAEtD,IAAI,CAAC,IAAI,GAClB,CACH,CAAA;QACH,CAAC,CAAC;QACD,KAAK;aACH,MAAM,CAAC,IAAI,CAAC,EAAE,CAAC,IAAI,CAAC,IAAI,KAAK,OAAO,CAAC;aACrC,GAAG,CAAC,IAAI,CAAC,EAAE;YACV,MAAM,CAAC,GAAG,CAAC,QAAQ,CAAC,CAAC,CAAC,GAAG,GAAG,IAAI,CAAC,IAAI,CAAC,CAAC,CAAC,IAAI,CAAC,IAAI,GAAG,KAAK,CAAC,GAAG,OAAO,CAAA;YACpE,OAAO,CACL,8BACE,CAAC,EAAE,CAAC,EACJ,CAAC,EAAE,EAAE,EACL,GAAG,EAAE,SAAS,IAAI,CAAC,IAAI,EAAE,EACzB,UAAU,EAAC,QAAQ,EACnB,KAAK,EAAE,EAAE,QAAQ,EAAE,MAAM,EAAE,EAC3B,SAAS,EAAE,OAAO,CAAC,cAAc,IAEhC,SAAS,CAAC,IAAI,CAAC,IAAI,GAAG,CAAC,CAAC,CACpB,CACR,CAAA;QACH,CAAC,CAAC,CACH,CACJ,CAAA;AACH,CAAC;AAED,MAAM,KAAK,GAAG,QAAQ,CAAC,UAAU,EAAE,KAAK,EAA2B;IACjE,MAAM,EACJ,GAAG,EACH,QAAQ,EACR,YAAY,EACZ,WAAW,EACX,iBAAiB,EACjB,OAAO,EACP,OAAO,EACP,SAAS,GACV,GAAG,KAAK,CAAA;IACT,MAAM,GAAG,GAAG,MAAM,CAAiB,IAAI,CAAC,CAAA;IACxC,MAAM,OAAO,GAAG,OAAO,CAAC,CAAC,CAAC,CAAA;IAE1B,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CACnB,6BACE,GAAG,EAAE,GAAG,EACR,KAAK,EAAE;YACL,QAAQ,EAAE,UAAU;YACpB,KAAK,EAAE,YAAY;YACnB,MAAM,EAAE,WAAW;YACnB,QAAQ,EAAE,QAAQ;YAClB,MAAM,EAAE,WAAW;YACnB,UAAU,EAAE,MAAM;SACnB;QAED,6BACE,KAAK,EAAE;gBACL,KAAK,EAAE,OAAO,CAAC,MAAM,GAAG,SAAS;gBACjC,QAAQ,EAAE,UAAU;gBACpB,IAAI,EAAE,OAAO,GAAG,OAAO,GAAG,iBAAiB;gBAC3C,aAAa,EAAE,MAAM;aACtB;YAED,oBAAC,UAAU,IACT,GAAG,EAAE,OAAO,EACZ,KAAK,EAAE,OAAO,GAAG,QAAQ,EACzB,GAAG,EAAE,OAAO,GAAG,QAAQ,GAAG,CAAC,SAAS,GAAG,OAAO,CAAC,MAAM,CAAC,GAAG,QAAQ,EACjE,OAAO,EAAE,CAAC,GAAG,QAAQ,GACrB,CACE,CACF,CACP,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,eAAe,KAAK,CAAA"}

package/dist/components/TextTrack.d.ts

@@ -1,6 +1,7 @@
+import React from 'react';
 import { MsaViewModel, ITextTrack } from '../model';
 declare const AnnotationTrack: ({ track, model, }: {
     track: ITextTrack;
     model: MsaViewModel;
-}) => JSX.Element;
+}) => React.JSX.Element;
 export default AnnotationTrack;

package/dist/components/Track.d.ts

@@ -1,10 +1,11 @@
+import React from 'react';
 import { MsaViewModel } from '../model';
 export declare const TrackLabel: ({ model, track, }: {
     model: MsaViewModel;
     track: any;
-}) => JSX.Element;
+}) => React.JSX.Element;
 declare const Track: ({ model, track, }: {
     model: MsaViewModel;
     track: any;
-}) => JSX.Element;
+}) => React.JSX.Element;
 export default Track;

package/dist/components/Track.js

@@ -1,11 +1,11 @@
-import React, { useState, useRef, useEffect } from 'react';
+import React, { useState, useRef, useEffect, lazy, Suspense } from 'react';
 import normalizeWheel from 'normalize-wheel';
 import { observer } from 'mobx-react';
 import { IconButton, Menu, MenuItem } from '@mui/material';
 import { makeStyles } from 'tss-react/mui';
 // icons
 import ArrowDropDownIcon from '@mui/icons-material/ArrowDropDown';
-import TrackInfoDialog from './TrackInfoDlg';
+const TrackInfoDialog = lazy(() => import('./dialogs/TrackInfoDlg'));
 const useStyles = makeStyles()({
     button: {
         padding: 0,
@@ -41,7 +41,8 @@ export const TrackLabel = observer(function ({ model, track, }) {
                     setTrackInfoDlgOpen(true);
                     setAnchorEl(undefined);
                 } }, "Get info"))) : null,
-        trackInfoDlgOpen ? (React.createElement(TrackInfoDialog, { model: track.model, onClose: () => setTrackInfoDlgOpen(false) })) : null));
+        trackInfoDlgOpen ? (React.createElement(Suspense, { fallback: null },
+            React.createElement(TrackInfoDialog, { model: track.model, onClose: () => setTrackInfoDlgOpen(false) }))) : null));
 });
 const Track = observer(function ({ model, track, }) {
     const { resizeHandleWidth } = model;

package/dist/components/Track.js.map

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