psyclaw 0.28.1 → 0.28.3

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (135) hide show
  1. package/README.md +5 -5
  2. package/agents/recommended/catalog.json +1 -1
  3. package/dist/src/adapters/pi/extension.js +79 -25
  4. package/dist/src/adapters/pi/extension.js.map +1 -1
  5. package/dist/src/ars/keybindings.d.ts +13 -0
  6. package/dist/src/ars/keybindings.js +50 -0
  7. package/dist/src/ars/keybindings.js.map +1 -0
  8. package/dist/src/ars/mode-editor.d.ts +25 -0
  9. package/dist/src/ars/mode-editor.js +78 -0
  10. package/dist/src/ars/mode-editor.js.map +1 -0
  11. package/dist/src/ars/profile.d.ts +4 -1
  12. package/dist/src/ars/profile.js +23 -6
  13. package/dist/src/ars/profile.js.map +1 -1
  14. package/dist/src/chat.js +3 -0
  15. package/dist/src/chat.js.map +1 -1
  16. package/dist/src/panel/server.js +1 -1
  17. package/dist/src/panel/server.js.map +1 -1
  18. package/package.json +10 -3
  19. package/vendor/academic-paper-skills/LICENSE +21 -0
  20. package/vendor/academic-paper-skills/NOTICE.md +7 -0
  21. package/vendor/academic-paper-skills/PSYCLAW_SOURCE.json +14 -0
  22. package/vendor/academic-paper-skills/academic-paper-composer/SKILL.md +840 -0
  23. package/vendor/academic-paper-skills/academic-paper-composer/references/section_guides.md +675 -0
  24. package/vendor/academic-paper-skills/academic-paper-composer/references/writing_standards.md +629 -0
  25. package/vendor/academic-paper-skills/academic-paper-composer/scripts/chapter_quality_check.py +470 -0
  26. package/vendor/academic-paper-skills/academic-paper-composer/scripts/final_evaluation.py +550 -0
  27. package/vendor/academic-paper-skills/academic-paper-strategist/SKILL.md +670 -0
  28. package/vendor/academic-paper-skills/academic-paper-strategist/references/quality_standards.md +336 -0
  29. package/vendor/academic-paper-skills/academic-paper-strategist/references/search_strategy.md +459 -0
  30. package/vendor/academic-paper-skills/academic-paper-strategist/scripts/evaluate_samples.py +300 -0
  31. package/vendor/academic-paper-skills/academic-paper-strategist/scripts/gap_analysis.py +399 -0
  32. package/vendor/ars/pi/wrapper.js +9 -0
  33. package/vendor/nature-skills/LICENSE +201 -0
  34. package/vendor/nature-skills/NOTICE.md +7 -0
  35. package/vendor/nature-skills/PSYCLAW_SOURCE.json +19 -0
  36. package/vendor/nature-skills/skills/nature-figure/README.md +107 -0
  37. package/vendor/nature-skills/skills/nature-figure/README_EN.md +107 -0
  38. package/vendor/nature-skills/skills/nature-figure/SKILL.md +154 -0
  39. package/vendor/nature-skills/skills/nature-figure/agents/openai.yaml +4 -0
  40. package/vendor/nature-skills/skills/nature-figure/evals/evals.json +325 -0
  41. package/vendor/nature-skills/skills/nature-figure/manifest.yaml +103 -0
  42. package/vendor/nature-skills/skills/nature-figure/references/ai-graphical-abstract-workflow.md +129 -0
  43. package/vendor/nature-skills/skills/nature-figure/references/api.md +576 -0
  44. package/vendor/nature-skills/skills/nature-figure/references/asset-adaptation.md +72 -0
  45. package/vendor/nature-skills/skills/nature-figure/references/backend-selection.md +118 -0
  46. package/vendor/nature-skills/skills/nature-figure/references/chart-types.md +348 -0
  47. package/vendor/nature-skills/skills/nature-figure/references/common-patterns.md +371 -0
  48. package/vendor/nature-skills/skills/nature-figure/references/demos.md +58 -0
  49. package/vendor/nature-skills/skills/nature-figure/references/design-theory.md +467 -0
  50. package/vendor/nature-skills/skills/nature-figure/references/figure-contract.md +122 -0
  51. package/vendor/nature-skills/skills/nature-figure/references/figure-legend-conventions.md +90 -0
  52. package/vendor/nature-skills/skills/nature-figure/references/multipanel-evidence-architecture.md +268 -0
  53. package/vendor/nature-skills/skills/nature-figure/references/nature-2026-observations.md +124 -0
  54. package/vendor/nature-skills/skills/nature-figure/references/nature-article-requirements.md +149 -0
  55. package/vendor/nature-skills/skills/nature-figure/references/openrouter-image-generation.md +141 -0
  56. package/vendor/nature-skills/skills/nature-figure/references/qa-contract.md +344 -0
  57. package/vendor/nature-skills/skills/nature-figure/references/r-template-index.md +66 -0
  58. package/vendor/nature-skills/skills/nature-figure/references/r-workflow.md +234 -0
  59. package/vendor/nature-skills/skills/nature-figure/references/template-catalog.md +33 -0
  60. package/vendor/nature-skills/skills/nature-figure/references/tutorials.md +260 -0
  61. package/vendor/nature-skills/skills/nature-figure/requirements.txt +1 -0
  62. package/vendor/nature-skills/skills/nature-figure/scripts/audit_figure_collisions.py +742 -0
  63. package/vendor/nature-skills/skills/nature-figure/scripts/audit_panel_alignment.py +933 -0
  64. package/vendor/nature-skills/skills/nature-figure/scripts/audit_pdf_text.py +152 -0
  65. package/vendor/nature-skills/skills/nature-figure/scripts/figure_safety.py +50 -0
  66. package/vendor/nature-skills/skills/nature-figure/scripts/generate_openrouter_schematic.py +260 -0
  67. package/vendor/nature-skills/skills/nature-figure/scripts/nature_figure_backend.py +93 -0
  68. package/vendor/nature-skills/skills/nature-figure/scripts/panel_alignment.R +188 -0
  69. package/vendor/nature-skills/skills/nature-figure/scripts/plot_templates.py +604 -0
  70. package/vendor/nature-skills/skills/nature-figure/scripts/validate_figure.py +835 -0
  71. package/vendor/nature-skills/skills/nature-figure/static/core/contract.md +55 -0
  72. package/vendor/nature-skills/skills/nature-figure/static/core/stance.md +41 -0
  73. package/vendor/nature-skills/skills/nature-figure/static/fragments/backend/python.md +56 -0
  74. package/vendor/nature-skills/skills/nature-figure/static/fragments/backend/r.md +63 -0
  75. package/vendor/nature-skills/skills/nature-figure/tests/test_figure_safety.py +209 -0
  76. package/vendor/nature-skills/skills/nature-polishing/README.md +58 -0
  77. package/vendor/nature-skills/skills/nature-polishing/README_EN.md +58 -0
  78. package/vendor/nature-skills/skills/nature-polishing/SKILL.md +111 -0
  79. package/vendor/nature-skills/skills/nature-polishing/agents/openai.yaml +4 -0
  80. package/vendor/nature-skills/skills/nature-polishing/manifest.yaml +101 -0
  81. package/vendor/nature-skills/skills/nature-polishing/references/latex-layout.md +211 -0
  82. package/vendor/nature-skills/skills/nature-polishing/references/nat-comms-2025-diction.md +73 -0
  83. package/vendor/nature-skills/skills/nature-polishing/references/phrasebank-playbook.md +175 -0
  84. package/vendor/nature-skills/skills/nature-polishing/references/published-article-patterns.md +126 -0
  85. package/vendor/nature-skills/skills/nature-polishing/references/section-moves.md +252 -0
  86. package/vendor/nature-skills/skills/nature-polishing/references/style-guardrails.md +94 -0
  87. package/vendor/nature-skills/skills/nature-polishing/references/writing-strategy.md +160 -0
  88. package/vendor/nature-skills/skills/nature-polishing/static/core/failure-modes.md +29 -0
  89. package/vendor/nature-skills/skills/nature-polishing/static/core/output-format.md +21 -0
  90. package/vendor/nature-skills/skills/nature-polishing/static/core/stance.md +26 -0
  91. package/vendor/nature-skills/skills/nature-polishing/static/fragments/journal/generic.md +17 -0
  92. package/vendor/nature-skills/skills/nature-polishing/static/fragments/journal/nat-comms.md +38 -0
  93. package/vendor/nature-skills/skills/nature-polishing/static/fragments/journal/nat-mach-intell.md +102 -0
  94. package/vendor/nature-skills/skills/nature-polishing/static/fragments/journal/nature.md +19 -0
  95. package/vendor/nature-skills/skills/nature-polishing/static/fragments/language/en.md +19 -0
  96. package/vendor/nature-skills/skills/nature-polishing/static/fragments/language/zh-to-en.md +19 -0
  97. package/vendor/nature-skills/skills/nature-polishing/static/fragments/paper_type/algorithmic.md +18 -0
  98. package/vendor/nature-skills/skills/nature-polishing/static/fragments/paper_type/hypothesis.md +17 -0
  99. package/vendor/nature-skills/skills/nature-polishing/static/fragments/paper_type/methods.md +35 -0
  100. package/vendor/nature-skills/skills/nature-polishing/static/fragments/paper_type/research.md +29 -0
  101. package/vendor/nature-skills/skills/nature-polishing/static/fragments/paper_type/review.md +17 -0
  102. package/vendor/nature-skills/skills/nature-polishing/static/fragments/section/abstract.md +26 -0
  103. package/vendor/nature-skills/skills/nature-polishing/static/fragments/section/conclusion.md +15 -0
  104. package/vendor/nature-skills/skills/nature-polishing/static/fragments/section/discussion.md +48 -0
  105. package/vendor/nature-skills/skills/nature-polishing/static/fragments/section/intro.md +33 -0
  106. package/vendor/nature-skills/skills/nature-polishing/static/fragments/section/methods.md +26 -0
  107. package/vendor/nature-skills/skills/nature-polishing/static/fragments/section/results.md +61 -0
  108. package/vendor/nature-skills/skills/nature-polishing/static/fragments/section/title.md +17 -0
  109. package/vendor/nature-skills/skills/nature-ref-verifier/README.md +44 -0
  110. package/vendor/nature-skills/skills/nature-ref-verifier/README_EN.md +44 -0
  111. package/vendor/nature-skills/skills/nature-ref-verifier/SKILL.md +196 -0
  112. package/vendor/nature-skills/skills/nature-ref-verifier/agents/openai.yaml +4 -0
  113. package/vendor/nature-skills/skills/nature-ref-verifier/manifest.yaml +19 -0
  114. package/vendor/nature-skills/skills/nature-ref-verifier/references/common-patterns.md +96 -0
  115. package/vendor/nature-skills/skills/nature-shared/README.md +43 -0
  116. package/vendor/nature-skills/skills/nature-shared/README_EN.md +43 -0
  117. package/vendor/nature-skills/skills/nature-shared/SKILL.md +33 -0
  118. package/vendor/nature-skills/skills/nature-shared/agents/openai.yaml +6 -0
  119. package/vendor/nature-skills/skills/nature-shared/core/consistency-sweep.md +122 -0
  120. package/vendor/nature-skills/skills/nature-shared/core/discussion-argument-language.md +192 -0
  121. package/vendor/nature-skills/skills/nature-shared/core/ethics.md +88 -0
  122. package/vendor/nature-skills/skills/nature-shared/core/main-text-discipline.md +179 -0
  123. package/vendor/nature-skills/skills/nature-shared/core/nature-abstract.md +171 -0
  124. package/vendor/nature-skills/skills/nature-shared/core/nature-introduction.md +164 -0
  125. package/vendor/nature-skills/skills/nature-shared/core/nature-results-discussion.md +215 -0
  126. package/vendor/nature-skills/skills/nature-shared/core/paper-type-taxonomy.md +41 -0
  127. package/vendor/nature-skills/skills/nature-shared/core/reader-workflow.md +21 -0
  128. package/vendor/nature-skills/skills/nature-shared/core/research-compliance.md +192 -0
  129. package/vendor/nature-skills/skills/nature-shared/core/terminology-ledger.md +58 -0
  130. package/vendor/nature-skills/skills/nature-shared/journal-formats/nat-comms.md +139 -0
  131. package/vendor/nature-skills/skills/nature-shared/journal-formats/nature-machine-intelligence.md +431 -0
  132. package/vendor/nature-skills/skills/nature-shared/journal-formats/nature.md +313 -0
  133. package/vendor/nature-skills/skills/nature-shared/manifest.yaml +52 -0
  134. package/vendor/nature-skills/skills/nature-shared/scripts/check_consistency.py +273 -0
  135. package/vendor/nature-skills/skills/nature-shared/tests/test_check_consistency.py +63 -0
@@ -0,0 +1,431 @@
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+ # Nature Machine Intelligence submission requirements
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+
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+ Canonical, stage-aware rules for manuscripts submitted to **Nature Machine
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+ Intelligence** (`NMI`; route key `nat-mach-intell`). This file contains the
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+ journal facts. A requesting skill supplies its own drafting, polishing, figure,
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+ data or statistics action layer.
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+
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+ Do not substitute the flagship *Nature* or *Nature Communications* limits.
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+ When an editor gives manuscript-specific instructions, those instructions take
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+ priority over this public-page snapshot.
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+
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+ ## Contents
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+
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+ 1. Authority and stage gate
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+ 2. Editorial scope and article types
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+ 3. Article and Analysis contract
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+ 4. Other content types
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+ 5. Initial-submission package
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+ 6. Writing, structure and accessibility
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+ 7. Cover letter, review mode and related work
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+ 8. Data, code and reporting standards
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+ 9. Figures, Extended Data and Supplementary Information
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+ 10. Accepted-in-principle production contract
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+ 11. Requirements not stated as fixed numbers
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+ 12. Official sources
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+
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+ ## 1. Authority and stage gate
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+
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+ Record the active stage before applying a rule:
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+
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+ - `initial_submission`: before the first editorial decision. A complete,
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+ reviewable manuscript is required, but no special house formatting is
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+ required.
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+ - `revision`: after peer review. Follow the handling editor's instructions in
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+ addition to the public guide and preserve a point-by-point response record.
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+ - `accepted_in_principle`: supply editable text, production-quality figures,
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+ final declarations, supporting-information inventory and requested forms.
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+ - `proof`: correct production errors only; do not silently introduce a new
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+ scientific claim or analysis.
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+
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+ Do not block an initial submission for missing final-production typography,
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+ editable source artwork, final table placement or ORCID linking. Do block or
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+ flag an initial package that lacks required scientific content, a cover letter,
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+ required availability statements, disclosed overlap or review access to data
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+ and central custom code.
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+
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+ ## 2. Editorial scope and article types
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+
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+ ### Scope fit
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+
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+ The journal considers high-quality original research and reviews across
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+ machine learning, robotics and artificial intelligence, including the broader
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+ scientific, societal and industrial effects of these technologies. It aims to
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+ support dialogue across disciplines, so a technically strong paper still needs
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+ an intelligible question, consequence and audience beyond one narrow benchmark
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+ community.
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+
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+ For an original-research **Article**, verify that the work presents substantial
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+ novel research and a complex, well-supported story. Several techniques or
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+ approaches may be needed, but method count is not a substitute for scientific
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+ importance, validation or scope fit.
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+
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+ ### Supported content types
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+
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+ The public content-type guide includes:
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+
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+ - Article
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+ - Analysis
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+ - Review Article
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+ - Perspective
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+ - Correspondence
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+ - Comment
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+ - Reusability Report
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+
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+ Primary research is normally eligible for either subscription publication or
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+ Gold open access. Non-primary content types are not normally eligible for Gold
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+ open access and should not be used to smuggle in new primary findings; only
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+ minimal supporting data are appropriate where the content type permits them.
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+
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+ ## 3. Article and Analysis contract
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+
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+ ### Article limits
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+
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+ | Item | Current NMI requirement |
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+ |---|---|
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+ | Main text | up to **3,500 words** |
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+ | Excluded from main-text count | abstract, Methods, references and figure legends |
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+ | Abstract | up to **150 words**, unreferenced |
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+ | Display items | up to **6** figures and tables combined |
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+ | References | typically up to **50** |
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+ | Supplementary Information | permitted when relevant |
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+
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+ ### Analysis limits
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+
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+ | Item | Current NMI requirement |
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+ |---|---|
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+ | Main text | up to **3,500 words** |
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+ | Excluded from main-text count | abstract, online Methods, references and figure legends |
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+ | Abstract | **100–150 words**, unreferenced |
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+ | Display items | up to **6** figures and tables combined |
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+ | References | typically up to **50** |
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+
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+ ### Article and Analysis structure
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+
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+ Use this sequence unless the editor authorizes a justified variant:
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+
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+ 1. Introduction, without an `Introduction` heading
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+ 2. Results
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+ 3. Discussion
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+ 4. Methods
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+
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+ Results and Methods may use short topical subheadings. Discussion should not
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+ use subheadings. The Methods section should be concise but contain enough
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+ detail for interpretation and replication; original research publishes Methods
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+ online.
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+
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+ Treat the six-item display allowance as a combined figure-plus-table budget.
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+ Plan the evidence hierarchy before drafting rather than shrinking essential
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+ validation into unreadable composite panels.
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+
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+ ## 4. Other content types
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+
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+ | Content type | Length | Displays | References | Key boundary |
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+ |---|---:|---:|---:|---|
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+ | Review Article | **3,000–4,000 words** | illustrations strongly encouraged | up to **100** | synthesize a field; annotations are encouraged for the most important references, normally no more than 10% of the list |
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+ | Perspective | **3,000–4,000 words** | as justified | up to **100** | present a scholarly, forward-looking viewpoint rather than a disguised original Article |
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+ | Correspondence | **500–1,000 words** | up to **1** | up to **10** | should not contain research data or analysis |
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+ | Comment | **1,500–2,000 words** | as justified | up to **15** | should not be a normal primary-research report |
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+ | Reusability Report | follow the Article format | follow the Article format | follow the Article format | evaluate robustness or reusability of existing code rather than merely announcing software |
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+
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+ Do not infer an Article limit for an unlisted or commissioned format. Check the
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+ current content-type page or the commissioning editor's instructions.
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+
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+ ## 5. Initial-submission package
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+
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+ ### Accepted review formats
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+
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+ At initial submission, NMI does not require special formatting if the material
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+ is complete and reviewable. The journal accepts:
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+
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+ - PDF
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+ - Microsoft Word
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+ - TeX/LaTeX, submitted as a compiled PDF for review
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+
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+ ### Package inventory
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+
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+ Prepare:
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+
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+ - one complete manuscript file containing the Methods, figures and any
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+ Extended Data used at review stage
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+ - a **cover letter**
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+ - Supplementary Information when needed for the conclusions, understanding or
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+ replication
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+
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+ The manuscript should include:
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+
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+ - author names and affiliations, unless optional double-anonymized review is
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+ selected
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+ - enough findings, methods and material detail for editorial and peer review
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+ - a complete reference list
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+ - optional Extended Data, within the ten-item limit
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+
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+ Every figure, table, Extended Data item and supplementary item must be cited in
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+ the manuscript. Supporting information is sent to reviewers, so it must be
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+ reviewable and must not contain claims that the main text depends on but never
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+ states.
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+
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+ ## 6. Writing, structure and accessibility
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+
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+ - Write for readers beyond the immediate machine-learning or application
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+ subfield.
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+ - Make titles and abstracts intelligible to scientists outside the specialty.
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+ - Explain unavoidable jargon and define non-standard abbreviations at first
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+ use; minimize abbreviations when plain language is shorter.
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+ - State the scientific or societal question, not only the architecture and
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+ benchmark score.
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+ - Report quantitative evidence and important limitations without inflating
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+ association, benchmark gain or simulation performance into general-world
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+ effectiveness.
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+ - Keep Methods concise but reproducible. A numeric Methods word limit is not
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+ stated on the current public NMI pages.
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+
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+ For algorithmic papers, distinguish the contribution from parameter scaling,
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+ data leakage, additional supervision, compute advantages and benchmark-specific
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+ tuning. For deployed or societal claims, describe the population, setting,
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+ failure modes and transfer boundary.
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+
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+ ## 7. Cover letter, review mode and related work
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+
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+ ### Cover letter
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+
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+ The initial package includes a cover letter. It should:
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+
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+ - explain the work's importance and fit for NMI's diverse readership
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+ - disclose related manuscripts under consideration or in press
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+ - disclose any prior discussion of the work with an NMI editor
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+ - place author affiliations and contact details here when double-anonymized
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+ review is selected
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+ - optionally recommend or oppose reviewers, giving a concise reason for an
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+ exclusion request
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+
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+ The cover letter is confidential and is not shown to reviewers. Do not repeat
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+ the abstract; use it to help the editor understand novelty, audience, overlap
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+ and any sensitive procedural context.
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+
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+ ### Double-anonymized peer review
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+
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+ Double-anonymized review is optional. Authors who select it must:
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+
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+ - remove identifying author and affiliation information from the manuscript
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+ - anonymize self-citations, acknowledgements, repository links and file
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+ metadata where necessary without making the science uninterpretable
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+ - provide author information in the cover letter and submission system
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+ - select the double-anonymized option during submission
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+
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+ The authors, not the journal, are responsible for effective anonymization.
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+
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+ ### Preprints, conference papers and overlapping work
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+
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+ - A preprint is not treated as prior publication. Disclose it and provide its
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+ DOI and licence where available; a preprint may be posted during review.
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+ - NMI may consider a journal manuscript extending a conference proceeding only
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+ when the new submission **substantially extends** the results, methodology,
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+ analysis, conclusions or implications. The editor decides whether the
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+ extension is sufficient.
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+ - Cite and disclose the conference paper, identify the concrete extension and
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+ obtain any reuse permission or attribution required for text, figures or
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+ tables.
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+ - Disclose and supply related manuscripts with overlapping authors that are
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+ under consideration or in press.
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+ - Do not submit work with significant overlap simultaneously to another
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+ journal.
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+
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+ NMI does **not** consider presubmission enquiries. Prepare the full initial
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+ submission instead.
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+
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+ ## 8. Data, code and reporting standards
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+
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+ ### Data Availability
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+
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+ Every original-research manuscript needs a Data Availability statement that
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+ maps each supporting dataset to an access route. At initial submission:
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+
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+ - give repository names, persistent identifiers or accession numbers when
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+ available
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+ - prefer recognized repositories for large or reusable datasets instead of
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+ burying them in Supplementary Information
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+ - make supporting data available to editors and reviewers on request
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+ - disclose legal, ethical, privacy, commercial, controlled-access,
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+ third-party or proprietary restrictions at submission and describe the
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+ access procedure precisely in the manuscript
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+ - avoid an unqualified `available upon request` statement
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+
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+ ### Code Availability
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+
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+ Place a separate headed **Code availability** section after Data Availability
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+ and before the references. It must state how central custom code or algorithms
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+ can be accessed and describe any restrictions.
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+
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+ For code central to the conclusions:
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+
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+ - make it available to editors and reviewers during peer review
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+ - provide executable instructions, environment/dependency information and the
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+ inputs needed to reproduce key results
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+ - prefer a DOI-minting repository such as Zenodo or Code Ocean and an
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+ Open Source Initiative-approved licence when release is possible
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+ - expect the central code to be peer reviewed
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+ - complete the **Software Submission Checklist** when newly developed code is
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+ central to the paper
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+
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+ Never invent a repository, DOI, licence, access condition or software version.
272
+ Route repository and statement drafting to `nature-data` and statistical
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+ completeness to `nature-statistics`.
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+
275
+ ### Reporting and protocols
276
+
277
+ - Complete the appropriate Nature Portfolio reporting summary when the study
278
+ type or field requires one, including relevant life, behavioural, social,
279
+ ecological and specified physical-science routes.
280
+ - Apply study-type standards such as CONSORT, STROBE, PRISMA or ARRIVE when
281
+ applicable.
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+ - Sharing step-by-step protocols through a persistent protocol platform is
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+ encouraged; cite the protocol in Methods.
284
+ - Apply `../core/research-compliance.md` to human, animal, clinical, image,
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+ structure, chemistry, taxonomy and provenance-sensitive work.
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+
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+ ### AI-assisted writing
288
+
289
+ - A large language model cannot be an author.
290
+ - Human authors remain responsible for the manuscript.
291
+ - Disclose substantive LLM use in Methods or another suitable section.
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+ - Pure AI-assisted copy editing does not require a declaration under the
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+ current Nature Portfolio policy.
294
+ - Apply the confidentiality and non-invention rules in `../core/ethics.md`.
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+
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+ ## 9. Figures, Extended Data and Supplementary Information
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+
298
+ ### Initial submission
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+
300
+ - Figures must be legible and assessable by reviewers; final production files
301
+ are not required at this stage.
302
+ - Use no more than **6** main display items for an Article or Analysis, counting
303
+ figures and tables together.
304
+ - Use no more than **10** Extended Data figures and tables combined.
305
+ - Cite every Extended Data item in the main text.
306
+
307
+ ### Legend content
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+
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+ Each legend should begin with a brief title and then describe the panels. It
310
+ should define:
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+
312
+ - visual encodings and panel labels
313
+ - centre and error-bar definitions
314
+ - the exact `n` and unit of analysis
315
+ - statistical tests, sidedness, corrections and exact P-value policy where
316
+ applicable
317
+ - scale bars and necessary sample identifiers
318
+
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+ Avoid placing a second Methods section in the legend. The current live NMI AIP
320
+ page says that a legend should not exceed the word limit of the article type,
321
+ but the current Content Types page does **not** assign a separate numeric limit
322
+ to each figure legend.
323
+
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+ The official NMI brief submission guide revised 9 July 2018 explicitly said to
325
+ keep each figure legend below **300 English words**. Because that number is not
326
+ repeated on the current live pages, treat it as a **historical advisory ceiling**,
327
+ not as a current journal hard limit.
328
+
329
+ Use this operating guardrail unless the live submission system or handling
330
+ editor gives a newer instruction:
331
+
332
+ - count the title and all panel descriptions as **one whole-figure legend**;
333
+ 300 words is not a per-panel allowance
334
+ - aim for **150–250 English words** for an ordinary multi-panel legend
335
+ - keep the complete legend below **300 English words** as a conservative
336
+ preflight ceiling
337
+ - move expendable methodological detail to Methods or Supplementary
338
+ Information, but retain the `n`, uncertainty and statistical information
339
+ needed to interpret the figure
340
+
341
+ ### Supplementary Information
342
+
343
+ - Keep SI relevant to the conclusions, understanding or replication.
344
+ - Number Supplementary figures and tables separately from main and Extended
345
+ Data items.
346
+ - Make each Supplementary figure plus legend fit on one PDF page.
347
+ - Cite every supplementary item in the manuscript.
348
+ - Combine simple SI into one PDF; provide complex tables or datasets as Excel
349
+ or CSV, and software packages as ZIP or TAR where appropriate.
350
+
351
+ ## 10. Accepted-in-principle production contract
352
+
353
+ Apply these only after the editor requests final files:
354
+
355
+ ### Text and tables
356
+
357
+ - Submit editable Microsoft Word or TeX/LaTeX source; PDF is not accepted as
358
+ the final manuscript source.
359
+ - Place tables at the end of the manuscript; complex tables may be supplied in
360
+ Excel.
361
+ - Number references sequentially and include DOI-bearing data and code records
362
+ in the reference list where cited.
363
+ - Do not use footnotes.
364
+ - Use short bold Methods headings.
365
+ - Keep acknowledgements brief, do not thank anonymous reviewers or editors,
366
+ and provide the funding statement separately.
367
+ - Link the corresponding authors' ORCID records before final acceptance when
368
+ requested.
369
+
370
+ ### Figure production
371
+
372
+ - Cite figures in sequential order.
373
+ - Supply figure panels at **at least 300 dpi** and no more than **180 mm** wide.
374
+ - Use editable **5–7 pt sans-serif** labels and Symbol for Greek characters.
375
+ - Use scale bars instead of magnification and define them in the legend.
376
+ - Keep labels, scale bars and error bars editable rather than flattened into a
377
+ raster when the production workflow permits.
378
+ - Provide source data. Full unprocessed gels or blots are required for relevant
379
+ figures, and statistical source data should be organized by figure, normally
380
+ in an Excel workbook.
381
+
382
+ ### Extended Data and supporting-information inventory
383
+
384
+ - Keep the combined Extended Data total at no more than **10**.
385
+ - Fit each Extended Data figure or table on one PDF page.
386
+ - Cite each item in the main text and include its legend in the Inventory of
387
+ Supporting Information.
388
+ - Finalize the SI numbering, citations, file formats and inventory before
389
+ upload.
390
+
391
+ ## 11. Requirements not stated as fixed numbers
392
+
393
+ The current official NMI pages reviewed for this contract do not publish:
394
+
395
+ - a fixed title character or word limit
396
+ - a separate numeric Methods word limit
397
+ - a current separate numeric per-figure-legend word limit; the older official
398
+ 2018 guide's below-300-word instruction is retained only as an advisory
399
+ preflight ceiling
400
+
401
+ Do not borrow numbers from flagship *Nature*, *Nature Communications* or a
402
+ third-party checklist. Do not present NMI's historical below-300-word figure-
403
+ legend instruction as a current hard limit. Write concisely, then follow any
404
+ new editor- or submission-system instruction at the active stage.
405
+
406
+ Open-access article-processing charges and currencies can change. If the author
407
+ asks for cost planning, check the live Publishing Options page instead of
408
+ treating a stored price as a submission rule.
409
+
410
+ ## 12. Official sources
411
+
412
+ Current pages verified **2026-08-14**:
413
+
414
+ - Submission guidelines: <https://www.nature.com/natmachintell/submission-guidelines>
415
+ - Content types: <https://www.nature.com/natmachintell/content>
416
+ - Preparing your submission: <https://www.nature.com/natmachintell/submission-guidelines/preparing-your-submission>
417
+ - Initial formatting: <https://www.nature.com/natmachintell/submission-guidelines/initial-formatting>
418
+ - Writing and language: <https://www.nature.com/natmachintell/submission-guidelines/writing-and-language>
419
+ - Accepted-in-principle and formatting: <https://www.nature.com/natmachintell/submission-guidelines/aip-and-formatting>
420
+ - Double-anonymized peer review: <https://www.nature.com/natmachintell/submission-guidelines/dapr>
421
+ - Editorial policies: <https://www.nature.com/natmachintell/editorial-policies>
422
+ - Reporting standards, data and code: <https://www.nature.com/natmachintell/editorial-policies/reporting-standards>
423
+ - Preprints and conference proceedings: <https://www.nature.com/natmachintell/editorial-policies/preprints-conference-proceedings>
424
+ - Presubmission enquiries: <https://www.nature.com/natmachintell/submission-guidelines/presubmission-enquiries>
425
+ - Aims and scope: <https://www.nature.com/natmachintell/aims>
426
+ - Publishing options: <https://www.nature.com/natmachintell/submission-guidelines/publishing-options>
427
+
428
+ Historical official source retained for conservative preflight only:
429
+
430
+ - Brief guide for submission to Nature Machine Intelligence, revised 9 July
431
+ 2018: <https://www.nature.com/documents/natmachintell-brief-submission-guide.pdf>