protvista-uniprot 2.13.2 → 3.0.1

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Files changed (124) hide show
  1. package/dist/es/__spec__/filter-config.spec.d.ts +1 -0
  2. package/dist/es/__spec__/filter-config.spec.js +123 -0
  3. package/dist/es/__spec__/filter-config.spec.js.map +1 -0
  4. package/dist/es/adapters/__tests__/__mocks__/uniprotkb-entry-data.d.ts +47 -0
  5. package/dist/es/adapters/__tests__/__mocks__/uniprotkb-entry-data.js +75 -0
  6. package/dist/es/adapters/__tests__/__mocks__/uniprotkb-entry-data.js.map +1 -0
  7. package/dist/es/adapters/__tests__/structure-adapter.spec.d.ts +1 -0
  8. package/dist/es/adapters/__tests__/structure-adapter.spec.js +14 -0
  9. package/dist/es/adapters/__tests__/structure-adapter.spec.js.map +1 -0
  10. package/dist/es/adapters/alphafold-confidence-adapter.d.ts +8 -0
  11. package/dist/es/{protvista-alphafold-confidence.js → adapters/alphafold-confidence-adapter.js} +4 -3
  12. package/dist/es/adapters/alphafold-confidence-adapter.js.map +1 -0
  13. package/dist/es/adapters/alphamissense-heatmap-adapter.d.ts +8 -0
  14. package/dist/es/{protvista-alphamissense-heatmap.js → adapters/alphamissense-heatmap-adapter.js} +4 -3
  15. package/dist/es/adapters/alphamissense-heatmap-adapter.js.map +1 -0
  16. package/dist/es/adapters/alphamissense-pathogenicity-adapter.d.ts +10 -0
  17. package/dist/es/{protvista-alphamissense-pathogenicity.js → adapters/alphamissense-pathogenicity-adapter.js} +3 -2
  18. package/dist/es/adapters/alphamissense-pathogenicity-adapter.js.map +1 -0
  19. package/dist/es/adapters/config/evidence.d.ts +14 -0
  20. package/dist/es/adapters/config/evidence.js +101 -0
  21. package/dist/es/adapters/config/evidence.js.map +1 -0
  22. package/dist/es/adapters/feature-adapter.d.ts +2 -0
  23. package/dist/es/adapters/feature-adapter.js +18 -0
  24. package/dist/es/adapters/feature-adapter.js.map +1 -0
  25. package/dist/es/adapters/interpro-adapter.d.ts +2 -0
  26. package/dist/es/adapters/interpro-adapter.js +60 -0
  27. package/dist/es/adapters/interpro-adapter.js.map +1 -0
  28. package/dist/es/adapters/proteomics-adapter.d.ts +2 -0
  29. package/dist/es/adapters/proteomics-adapter.js +66 -0
  30. package/dist/es/adapters/proteomics-adapter.js.map +1 -0
  31. package/dist/es/{protvista-ptm-exchange.d.ts → adapters/ptm-exchange-adapter.d.ts} +2 -2
  32. package/dist/es/{protvista-ptm-exchange.js → adapters/ptm-exchange-adapter.js} +3 -2
  33. package/dist/es/adapters/ptm-exchange-adapter.js.map +1 -0
  34. package/dist/es/adapters/structure-adapter.d.ts +4 -0
  35. package/dist/es/adapters/structure-adapter.js +89 -0
  36. package/dist/es/adapters/structure-adapter.js.map +1 -0
  37. package/dist/es/adapters/types/alphafold.js +2 -0
  38. package/dist/es/adapters/types/alphafold.js.map +1 -0
  39. package/dist/es/adapters/variation-adapter.d.ts +7 -0
  40. package/dist/es/adapters/variation-adapter.js +31 -0
  41. package/dist/es/adapters/variation-adapter.js.map +1 -0
  42. package/dist/es/{protvista-variation-graph-adapter.d.ts → adapters/variation-graph-adapter.d.ts} +2 -1
  43. package/dist/es/{protvista-variation-graph-adapter.js → adapters/variation-graph-adapter.js} +12 -5
  44. package/dist/es/adapters/variation-graph-adapter.js.map +1 -0
  45. package/dist/es/config.json +54 -54
  46. package/dist/es/filter-config.d.ts +24 -0
  47. package/dist/es/{filterConfig.js → filter-config.js} +1 -1
  48. package/dist/es/filter-config.js.map +1 -0
  49. package/dist/es/index.d.ts +5 -10
  50. package/dist/es/index.js +5 -15
  51. package/dist/es/index.js.map +1 -1
  52. package/dist/es/protvista-uniprot-structure.js +15 -9
  53. package/dist/es/protvista-uniprot-structure.js.map +1 -1
  54. package/dist/es/protvista-uniprot.d.ts +1 -100
  55. package/dist/es/protvista-uniprot.js +46 -60
  56. package/dist/es/protvista-uniprot.js.map +1 -1
  57. package/dist/es/styles/protvista-styles.js +2 -1
  58. package/dist/es/styles/protvista-styles.js.map +1 -1
  59. package/dist/es/tooltips/featureTooltip.d.ts +4 -0
  60. package/dist/es/tooltips/featureTooltip.js +160 -0
  61. package/dist/es/tooltips/featureTooltip.js.map +1 -0
  62. package/dist/es/tooltips/structureTooltip.d.ts +2 -0
  63. package/dist/es/tooltips/structureTooltip.js +15 -0
  64. package/dist/es/tooltips/structureTooltip.js.map +1 -0
  65. package/dist/es/tooltips/variationTooltip.d.ts +3 -0
  66. package/dist/es/tooltips/variationTooltip.js +82 -0
  67. package/dist/es/tooltips/variationTooltip.js.map +1 -0
  68. package/dist/es/utils.d.ts +3 -0
  69. package/dist/es/utils.js +28 -0
  70. package/dist/es/utils.js.map +1 -0
  71. package/dist/protvista-uniprot.js +166 -155
  72. package/dist/protvista-uniprot.js.map +1 -1
  73. package/package.json +25 -30
  74. package/src/__spec__/filter-config.spec.ts +143 -0
  75. package/src/adapters/__tests__/__mocks__/uniprotkb-entry-data.ts +76 -0
  76. package/src/adapters/__tests__/__snapshots__/structure-adapter.spec.ts.snap +157 -0
  77. package/src/adapters/__tests__/structure-adapter.spec.ts +19 -0
  78. package/src/{protvista-alphafold-confidence.ts → adapters/alphafold-confidence-adapter.ts} +5 -3
  79. package/src/{protvista-alphamissense-heatmap.ts → adapters/alphamissense-heatmap-adapter.ts} +8 -4
  80. package/src/{protvista-alphamissense-pathogenicity.ts → adapters/alphamissense-pathogenicity-adapter.ts} +4 -2
  81. package/src/adapters/config/evidence.ts +105 -0
  82. package/src/adapters/feature-adapter.ts +19 -0
  83. package/src/adapters/interpro-adapter.ts +71 -0
  84. package/src/adapters/proteomics-adapter.ts +76 -0
  85. package/src/{protvista-ptm-exchange.ts → adapters/ptm-exchange-adapter.ts} +3 -1
  86. package/src/adapters/structure-adapter.ts +105 -0
  87. package/src/adapters/variation-adapter.ts +44 -0
  88. package/src/{protvista-variation-graph-adapter.ts → adapters/variation-graph-adapter.ts} +25 -18
  89. package/src/config.json +54 -54
  90. package/src/{filterConfig.ts → filter-config.ts} +17 -12
  91. package/src/index.ts +5 -20
  92. package/src/protvista-uniprot-structure.ts +6 -14
  93. package/src/protvista-uniprot.ts +66 -96
  94. package/src/styles/protvista-styles.ts +2 -1
  95. package/src/tooltips/featureTooltip.ts +223 -0
  96. package/src/tooltips/structureTooltip.ts +20 -0
  97. package/src/tooltips/variationTooltip.ts +139 -0
  98. package/src/utils.ts +37 -0
  99. package/dist/es/commonTypes.js +0 -2
  100. package/dist/es/commonTypes.js.map +0 -1
  101. package/dist/es/filterConfig.d.ts +0 -20
  102. package/dist/es/filterConfig.js.map +0 -1
  103. package/dist/es/loadComponents.d.ts +0 -2
  104. package/dist/es/loadComponents.js +0 -7
  105. package/dist/es/loadComponents.js.map +0 -1
  106. package/dist/es/protvista-alphafold-confidence.d.ts +0 -9
  107. package/dist/es/protvista-alphafold-confidence.js.map +0 -1
  108. package/dist/es/protvista-alphamissense-heatmap.d.ts +0 -8
  109. package/dist/es/protvista-alphamissense-heatmap.js.map +0 -1
  110. package/dist/es/protvista-alphamissense-pathogenicity.d.ts +0 -10
  111. package/dist/es/protvista-alphamissense-pathogenicity.js.map +0 -1
  112. package/dist/es/protvista-ptm-exchange.js.map +0 -1
  113. package/dist/es/protvista-variation-graph-adapter.js.map +0 -1
  114. package/src/loadComponents.ts +0 -10
  115. package/src/types/nightingale-components.d.ts +0 -13
  116. package/src/types/nightingale-sequence-heatmap.d.ts +0 -1
  117. package/src/types/protvista-feature-adapter.d.ts +0 -1
  118. package/src/types/protvista-interpro-adapter.d.ts +0 -1
  119. package/src/types/protvista-proteomics-adapter.d.ts +0 -1
  120. package/src/types/protvista-structure-adapter.d.ts +0 -1
  121. package/src/types/protvista-structure.d.ts +0 -1
  122. package/src/types/protvista-variation.d.ts +0 -15
  123. /package/dist/es/{commonTypes.d.ts → adapters/types/alphafold.d.ts} +0 -0
  124. /package/src/{commonTypes.ts → adapters/types/alphafold.ts} +0 -0

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