pmem-ai 0.7.2 → 0.7.4

package/dist/core/capture.js

@@ -0,0 +1,380 @@
+"use strict";
+var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    var desc = Object.getOwnPropertyDescriptor(m, k);
+    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
+      desc = { enumerable: true, get: function() { return m[k]; } };
+    }
+    Object.defineProperty(o, k2, desc);
+}) : (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    o[k2] = m[k];
+}));
+var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
+    Object.defineProperty(o, "default", { enumerable: true, value: v });
+}) : function(o, v) {
+    o["default"] = v;
+});
+var __importStar = (this && this.__importStar) || (function () {
+    var ownKeys = function(o) {
+        ownKeys = Object.getOwnPropertyNames || function (o) {
+            var ar = [];
+            for (var k in o) if (Object.prototype.hasOwnProperty.call(o, k)) ar[ar.length] = k;
+            return ar;
+        };
+        return ownKeys(o);
+    };
+    return function (mod) {
+        if (mod && mod.__esModule) return mod;
+        var result = {};
+        if (mod != null) for (var k = ownKeys(mod), i = 0; i < k.length; i++) if (k[i] !== "default") __createBinding(result, mod, k[i]);
+        __setModuleDefault(result, mod);
+        return result;
+    };
+})();
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.captureCore = captureCore;
+const path = __importStar(require("path"));
+const fs = __importStar(require("fs"));
+const crypto = __importStar(require("crypto"));
+const child_process_1 = require("child_process");
+const fs_1 = require("./fs");
+const manifest_1 = require("./manifest");
+const rebuild_1 = require("../commands/rebuild");
+const verify_1 = require("../commands/verify");
+const db_1 = require("./db");
+const status_1 = require("./query/status");
+function captureCore(pmemPath, options = {}) {
+    const cwd = process.cwd();
+    if (!(0, fs_1.fileExists)(pmemPath)) {
+        return {
+            success: false,
+            message: 'No .pmem directory found. Run pmem init first.'
+        };
+    }
+    // 1. Detect changed files
+    let status;
+    try {
+        status = (0, status_1.statusQuery)(pmemPath);
+    }
+    catch (err) {
+        return {
+            success: false,
+            message: `Failed to detect changes: ${err.message}`
+        };
+    }
+    const changedFiles = (status.changes || []).filter(f => !f.path.startsWith('.pmem/') && !f.path.startsWith('.pmem\\') && f.path !== '.pmem');
+    if (changedFiles.length === 0 && !options.force) {
+        return {
+            success: true,
+            message: 'No changed files detected. Memory is up-to-date.',
+            skipped: true
+        };
+    }
+    // 2. Compute git/mtime diff hash for duplicate check
+    let diffHash = '';
+    try {
+        const isGit = (() => {
+            try {
+                (0, child_process_1.execSync)('git rev-parse --git-dir', { cwd, stdio: 'ignore' });
+                return true;
+            }
+            catch {
+                return false;
+            }
+        })();
+        if (isGit) {
+            const statusOutput = (0, child_process_1.execSync)("git status --porcelain --untracked-files=all -- . ':!.pmem'", { cwd, encoding: 'utf8', timeout: 5000 });
+            const diffOutput = (0, child_process_1.execSync)("git diff HEAD -- . ':!.pmem'", { cwd, encoding: 'utf8', timeout: 5000 });
+            const untrackedHashes = changedFiles
+                .filter(f => f.status.includes('?') || f.status === '??')
+                .map(f => {
+                const fullPath = path.join(cwd, f.path);
+                if (!(0, fs_1.fileExists)(fullPath))
+                    return `${f.path}:missing`;
+                try {
+                    const content = fs.readFileSync(fullPath);
+                    return `${f.path}:${crypto.createHash('sha256').update(content).digest('hex')}`;
+                }
+                catch {
+                    return `${f.path}:error`;
+                }
+            })
+                .join('\n');
+            const combined = [
+                statusOutput,
+                diffOutput,
+                untrackedHashes
+            ].join('\n---pmem-diff-boundary---');
+            diffHash = crypto.createHash('sha256').update(combined).digest('hex');
+        }
+        else {
+            // Fallback mtime-based hash of changed files and mtimes
+            const mtimeList = changedFiles.map(c => {
+                const fullPath = path.join(cwd, c.path);
+                const mtime = (0, fs_1.fileExists)(fullPath) ? (0, fs_1.getFileMtime)(fullPath) || 0 : 0;
+                return `${c.path}:${mtime}:${c.status}`;
+            }).join('\n');
+            diffHash = crypto.createHash('sha256').update(mtimeList).digest('hex');
+        }
+    }
+    catch (err) {
+        // If diff computation fails, we use a fallback hash based on file names only
+        const fallbackList = changedFiles.map(c => `${c.path}:${c.status}`).join('\n');
+        diffHash = crypto.createHash('sha256').update(fallbackList).digest('hex');
+    }
+    // 3. Find the latest trace card and check its diff_hash
+    const traceDir = path.resolve(pmemPath, 'traces');
+    (0, fs_1.ensureDir)(traceDir);
+    if (!options.force && diffHash) {
+        try {
+            const existingTraceFiles = fs.readdirSync(traceDir)
+                .filter((f) => f.endsWith('.md'))
+                .sort((a, b) => b.localeCompare(a)); // Sort descending to get latest first
+            if (existingTraceFiles.length > 0) {
+                const latestTracePath = path.join(traceDir, existingTraceFiles[0]);
+                const latestTraceContent = (0, fs_1.readFile)(latestTracePath) || '';
+                // Match diff_hash: "..." or diff_hash: ...
+                const diffHashMatch = latestTraceContent.match(/diff_hash:\s*["']?([a-fA-F0-9]+)["']?/);
+                if (diffHashMatch && diffHashMatch[1] === diffHash) {
+                    return {
+                        success: true,
+                        message: 'No new capture created. Existing trace already records this diff.',
+                        skipped: true
+                    };
+                }
+            }
+        }
+        catch {
+            // Ignore directory read/parse errors for safety
+        }
+    }
+    // 4. Resolve summary
+    let summary = options.summary;
+    if (!summary) {
+        // Try to get latest task from session.json
+        const sessionPath = path.join(pmemPath, 'session.json');
+        if ((0, fs_1.fileExists)(sessionPath)) {
+            try {
+                const sessionContent = (0, fs_1.readFile)(sessionPath);
+                if (sessionContent) {
+                    const sessionData = JSON.parse(sessionContent);
+                    if (sessionData.latest_task) {
+                        summary = `Capture: ${sessionData.latest_task}`;
+                    }
+                }
+            }
+            catch {
+                // Fallback if parsing fails
+            }
+        }
+    }
+    if (!summary) {
+        // Fallback: list changed files
+        const filePaths = changedFiles.map(f => f.path);
+        summary = `Automated capture: changed ${filePaths.join(', ')}`;
+    }
+    // 5. Resolve next
+    const next = options.next || 'Continue development.';
+    // 6. Create trace card
+    const today = new Date().toISOString().split('T')[0];
+    let traceFile = '';
+    try {
+        const existingTraces = fs.readdirSync(traceDir)
+            .filter((f) => f.startsWith(today) && f.endsWith('.md'))
+            .length;
+        const traceNum = String(existingTraces + 1).padStart(3, '0');
+        traceFile = path.resolve(traceDir, `${today}-${traceNum}.md`);
+        // Strict path traversal validation
+        if (!traceFile.startsWith(traceDir)) {
+            throw new Error('Security: trace path traversal detected');
+        }
+        const cardId = `trace.${today}-${traceNum}`;
+        const traceContent = `---
+id: ${cardId}
+type: trace
+created: ${new Date().toISOString()}
+diff_hash: ${diffHash}
+---
+
+# Capture: ${summary}
+
+## What changed
+
+${summary}
+
+## Changed files
+
+${changedFiles.map(f => `- ${f.path}`).join('\n')}
+
+## Next
+
+- ${next}
+`;
+        (0, fs_1.atomicWrite)(traceFile, traceContent);
+    }
+    catch (err) {
+        return {
+            success: false,
+            message: `Failed to write trace card: ${err.message}`
+        };
+    }
+    // 7. Update .pmem/next.md in managed block
+    const nextPath = path.join(pmemPath, 'next.md');
+    const managedStart = '<!-- pmem:next:start -->';
+    const managedEnd = '<!-- pmem:next:end -->';
+    const managedContent = `${managedStart}\n- Recommended next step: ${next}\n${managedEnd}`;
+    try {
+        if ((0, fs_1.fileExists)(nextPath)) {
+            const currentNext = (0, fs_1.readFile)(nextPath) || '';
+            const startIndex = currentNext.indexOf(managedStart);
+            const endIndex = currentNext.indexOf(managedEnd);
+            if (startIndex >= 0 && endIndex >= 0 && endIndex > startIndex) {
+                const updatedNext = currentNext.substring(0, startIndex) +
+                    managedContent +
+                    currentNext.substring(endIndex + managedEnd.length);
+                (0, fs_1.writeFile)(nextPath, updatedNext);
+            }
+            else {
+                // Managed block not found, append it
+                const spacer = currentNext.endsWith('\n') ? '' : '\n';
+                (0, fs_1.writeFile)(nextPath, `${currentNext}${spacer}\n${managedContent}\n`);
+            }
+        }
+        else {
+            // Create new file
+            (0, fs_1.writeFile)(nextPath, `# Next Steps\n\n${managedContent}\n`);
+        }
+    }
+    catch (err) {
+        return {
+            success: false,
+            message: `Failed to update next.md: ${err.message}`
+        };
+    }
+    // 8. DB transaction to resolve dirty flags
+    const dbPath = path.join(pmemPath, 'pmem.db');
+    let db = null;
+    let transactionActive = false;
+    let backupManifest = null;
+    const manifestPath = path.join(pmemPath, 'manifest.yml');
+    const dirtyPath = path.join(pmemPath, '.dirty');
+    try {
+        const manifest = (0, manifest_1.loadManifest)(pmemPath);
+        if (manifest) {
+            backupManifest = JSON.stringify(manifest);
+        }
+        if ((0, fs_1.fileExists)(dbPath)) {
+            db = (0, db_1.openDatabase)(pmemPath);
+            (0, db_1.createSchema)(db);
+            // Start transaction
+            db.prepare('BEGIN TRANSACTION').run();
+            transactionActive = true;
+            const activeSession = (0, db_1.getActiveSession)(db);
+            // Auto mark changed files dirty first to make sure they are tracked before resolving
+            const allPaths = db.prepare("SELECT card_id, path FROM paths").all();
+            const dirtyCards = [];
+            for (const change of changedFiles) {
+                for (const p of allPaths) {
+                    if (p.card_id && p.path && change.path) {
+                        // Check if matches
+                        const isMatch = (() => {
+                            const p1 = change.path.replace(/\\/g, '/');
+                            const p2 = p.path.replace(/\\/g, '/');
+                            return p1 === p2 || p1.endsWith('/' + p2) || p2.endsWith('/' + p1);
+                        })();
+                        if (isMatch) {
+                            if (!dirtyCards.includes(p.card_id)) {
+                                (0, db_1.insertDirtyFlag)(db, 'card', p.card_id, 'file_changed: ' + change.path, activeSession?.id);
+                                dirtyCards.push(p.card_id);
+                            }
+                        }
+                    }
+                }
+            }
+            // Resolve affected cards dirty flags
+            const affectedCards = status.affected_cards || [];
+            const cardsToResolve = Array.from(new Set([
+                ...dirtyCards,
+                ...affectedCards.map((ac) => ac.card_id)
+            ]));
+            for (const cardId of cardsToResolve) {
+                (0, db_1.resolveDirtyFlags)(db, 'card', cardId);
+            }
+            // Resolve project level dirty flag
+            (0, db_1.resolveDirtyFlags)(db, 'project', '.pmem');
+            // Log update to SQLite
+            const todayNum = path.basename(traceFile, '.md').split('-').pop() || '001';
+            const traceCardId = `trace.${today}-${todayNum}`;
+            (0, db_1.insertUpdateLog)(db, 'confirm_update', summary, activeSession?.id, [traceCardId], true);
+            // Commit transaction
+            db.prepare('COMMIT').run();
+            transactionActive = false;
+            (0, db_1.closeDatabase)();
+        }
+        // Clean up dirty state in files
+        if ((0, fs_1.fileExists)(dirtyPath)) {
+            fs.unlinkSync(dirtyPath);
+        }
+        if (manifest) {
+            manifest.memory_status.dirty = false;
+            manifest.memory_status.dirty_reason = null;
+            manifest.memory_status.dirty_since = null;
+            (0, manifest_1.saveManifest)(pmemPath, manifest);
+        }
+    }
+    catch (err) {
+        if (db && transactionActive) {
+            try {
+                db.prepare('ROLLBACK').run();
+            }
+            catch { }
+        }
+        try {
+            (0, db_1.closeDatabase)();
+        }
+        catch { }
+        // Rollback manifest
+        if (backupManifest && (0, fs_1.fileExists)(manifestPath)) {
+            try {
+                (0, manifest_1.saveManifest)(pmemPath, JSON.parse(backupManifest));
+            }
+            catch { }
+        }
+        // Rollback trace file
+        if ((0, fs_1.fileExists)(traceFile)) {
+            try {
+                fs.unlinkSync(traceFile);
+            }
+            catch { }
+        }
+        return {
+            success: false,
+            message: `Failed SQLite transaction: ${err.message}`
+        };
+    }
+    // 9. Run rebuild (incremental or full)
+    try {
+        (0, rebuild_1.rebuildCommand)({ full: options.full === true });
+    }
+    catch (err) {
+        return {
+            success: false,
+            message: `Failed rebuild: ${err.message}`,
+            tracePath: traceFile
+        };
+    }
+    // 10. Run lightweight verify
+    try {
+        (0, verify_1.verifyCommand)({ fix: false, fixLocks: false, fixStale: false, relaxed: true, noExit: true });
+    }
+    catch (err) {
+        // Verification warning only, do not fail capture
+    }
+    return {
+        success: true,
+        message: 'Memory sync and update completed successfully.',
+        tracePath: traceFile
+    };
+}
+//# sourceMappingURL=capture.js.map

package/dist/core/capture.js.map

@@ -0,0 +1 @@
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package/dist/core/db.d.ts

@@ -12,6 +12,17 @@ export declare function upsertCard(db: Database.Database, card: import('../types
 export declare function deleteCardEdges(db: Database.Database, cardId: string): void;
 export declare function deleteExplicitCardEdges(db: Database.Database, cardId: string): void;
 export declare function deleteMentionEdges(db: Database.Database, cardId: string): void;
+/**
+ * v0.7.3 (issue #6): per-card inferred edge cleanup.
+ *
+ * Rebuilds need to re-derive inferred edges (e.g. task→module
+ * next_step_of) from the card's *current* frontmatter. Without this,
+ * an incremental rebuild that only re-processes one card would leave
+ * stale inferred edges in the DB that point to modules the card no
+ * longer references. Used by `rebuildCommand` for every re-processed
+ * card, in both full and incremental modes.
+ */
+export declare function deleteInferredCardEdges(db: Database.Database, cardId: string): void;
 export declare function insertEdge(db: Database.Database, edge: import('../types').EdgeRow): void;
 export declare function deleteCardAliases(db: Database.Database, cardId: string): void;
 export declare function insertAlias(db: Database.Database, cardId: string, alias: string, language?: string): void;
@@ -62,4 +73,13 @@ export declare function getEdgesForCard(db: Database.Database, cardId: string, s
 export declare function updateEdgeSource(db: Database.Database, edgeIds: number[], newSource: 'explicit' | 'inferred', newConfidence: number): number;
 export declare function deleteEdgesByIds(db: Database.Database, edgeIds: number[]): number;
 export declare function getOrphanEdges(db: Database.Database): EdgeRow[];
+/**
+ * v0.7.3 (issue #6): prune edges whose endpoints reference cards that
+ * no longer exist in the `cards` table. Returns the number of rows
+ * deleted. Called by `rebuildCommand --full` after the rebuild loop
+ * so that a deleted-card file can't leave behind edges that point to
+ * it. The matching `select` form lives in `getOrphanEdges` for ad-hoc
+ * inspection.
+ */
+export declare function deleteOrphanEdges(db: Database.Database): number;
 //# sourceMappingURL=db.d.ts.map

package/dist/core/db.d.ts.map

@@ -1 +1 @@
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package/dist/core/db.js

@@ -48,6 +48,7 @@ exports.upsertCard = upsertCard;
 exports.deleteCardEdges = deleteCardEdges;
 exports.deleteExplicitCardEdges = deleteExplicitCardEdges;
 exports.deleteMentionEdges = deleteMentionEdges;
+exports.deleteInferredCardEdges = deleteInferredCardEdges;
 exports.insertEdge = insertEdge;
 exports.deleteCardAliases = deleteCardAliases;
 exports.insertAlias = insertAlias;
@@ -72,6 +73,7 @@ exports.getEdgesForCard = getEdgesForCard;
 exports.updateEdgeSource = updateEdgeSource;
 exports.deleteEdgesByIds = deleteEdgesByIds;
 exports.getOrphanEdges = getOrphanEdges;
+exports.deleteOrphanEdges = deleteOrphanEdges;
 const better_sqlite3_1 = __importDefault(require("better-sqlite3"));
 const path = __importStar(require("path"));
 const fs_1 = require("./fs");
@@ -261,6 +263,19 @@ function deleteExplicitCardEdges(db, cardId) {
 function deleteMentionEdges(db, cardId) {
     db.prepare("DELETE FROM edges WHERE from_id = ? AND source = 'mention'").run(cardId);
 }
+/**
+ * v0.7.3 (issue #6): per-card inferred edge cleanup.
+ *
+ * Rebuilds need to re-derive inferred edges (e.g. task→module
+ * next_step_of) from the card's *current* frontmatter. Without this,
+ * an incremental rebuild that only re-processes one card would leave
+ * stale inferred edges in the DB that point to modules the card no
+ * longer references. Used by `rebuildCommand` for every re-processed
+ * card, in both full and incremental modes.
+ */
+function deleteInferredCardEdges(db, cardId) {
+    db.prepare("DELETE FROM edges WHERE from_id = ? AND source = 'inferred'").run(cardId);
+}
 function insertEdge(db, edge) {
     db.prepare(`
     INSERT OR IGNORE INTO edges (from_id, to_id, type, source, confidence, created_at, updated_at)
@@ -378,4 +393,19 @@ function getOrphanEdges(db) {
     WHERE c1.id IS NULL OR c2.id IS NULL
   `).all();
 }
+/**
+ * v0.7.3 (issue #6): prune edges whose endpoints reference cards that
+ * no longer exist in the `cards` table. Returns the number of rows
+ * deleted. Called by `rebuildCommand --full` after the rebuild loop
+ * so that a deleted-card file can't leave behind edges that point to
+ * it. The matching `select` form lives in `getOrphanEdges` for ad-hoc
+ * inspection.
+ */
+function deleteOrphanEdges(db) {
+    return db.prepare(`
+    DELETE FROM edges
+    WHERE from_id NOT IN (SELECT id FROM cards WHERE is_deleted = 0)
+       OR to_id   NOT IN (SELECT id FROM cards WHERE is_deleted = 0)
+  `).run().changes;
+}
 //# sourceMappingURL=db.js.map

package/dist/core/db.js.map

@@ -1 +1 @@
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package/dist/core/query/context.d.ts

@@ -0,0 +1,3 @@
+import type { ContextQueryResult } from '../../types';
+export declare function contextQuery(pmemPath: string, task: string, budget?: number): ContextQueryResult;
+//# sourceMappingURL=context.d.ts.map

package/dist/core/query/context.d.ts.map

@@ -0,0 +1 @@
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