phenoml 0.0.4 → 0.0.7

package/dist/esm/core/fetcher/EndpointSupplier.mjs

@@ -0,0 +1,20 @@
+var __awaiter = (this && this.__awaiter) || function (thisArg, _arguments, P, generator) {
+    function adopt(value) { return value instanceof P ? value : new P(function (resolve) { resolve(value); }); }
+    return new (P || (P = Promise))(function (resolve, reject) {
+        function fulfilled(value) { try { step(generator.next(value)); } catch (e) { reject(e); } }
+        function rejected(value) { try { step(generator["throw"](value)); } catch (e) { reject(e); } }
+        function step(result) { result.done ? resolve(result.value) : adopt(result.value).then(fulfilled, rejected); }
+        step((generator = generator.apply(thisArg, _arguments || [])).next());
+    });
+};
+import { Supplier } from "./Supplier.mjs";
+export const EndpointSupplier = {
+    get: (supplier, arg) => __awaiter(void 0, void 0, void 0, function* () {
+        if (typeof supplier === "function") {
+            return supplier(arg);
+        }
+        else {
+            return supplier;
+        }
+    }),
+};

package/dist/esm/core/fetcher/Fetcher.d.mts

@@ -1,12 +1,13 @@
-import { APIResponse } from "./APIResponse.mjs";
-import { Supplier } from "./Supplier.mjs";
+import type { APIResponse } from "./APIResponse.mjs";
+import type { EndpointMetadata } from "./EndpointMetadata.mjs";
+import { EndpointSupplier } from "./EndpointSupplier.mjs";
 export type FetchFunction = <R = unknown>(args: Fetcher.Args) => Promise<APIResponse<R, Fetcher.Error>>;
 export declare namespace Fetcher {
     interface Args {
         url: string;
         method: string;
         contentType?: string;
-        headers?: Record<string, string | Supplier<string | null | undefined> | null | undefined>;
+        headers?: Record<string, string | EndpointSupplier<string | null | undefined> | null | undefined>;
         queryParameters?: Record<string, unknown>;
         body?: unknown;
         timeoutMs?: number;
@@ -16,6 +17,7 @@ export declare namespace Fetcher {
         requestType?: "json" | "file" | "bytes";
         responseType?: "json" | "blob" | "sse" | "streaming" | "text" | "arrayBuffer" | "binary-response";
         duplex?: "half";
+        endpointMetadata?: EndpointMetadata;
     }
     type Error = FailedStatusCodeError | NonJsonError | TimeoutError | UnknownError;
     interface FailedStatusCodeError {

package/dist/esm/core/fetcher/Fetcher.mjs

@@ -9,6 +9,7 @@ var __awaiter = (this && this.__awaiter) || function (thisArg, _arguments, P, ge
 };
 import { toJson } from "../json.mjs";
 import { createRequestUrl } from "./createRequestUrl.mjs";
+import { EndpointSupplier } from "./EndpointSupplier.mjs";
 import { getErrorResponseBody } from "./getErrorResponseBody.mjs";
 import { getFetchFn } from "./getFetchFn.mjs";
 import { getRequestBody } from "./getRequestBody.mjs";
@@ -16,9 +17,9 @@ import { getResponseBody } from "./getResponseBody.mjs";
 import { makeRequest } from "./makeRequest.mjs";
 import { abortRawResponse, toRawResponse, unknownRawResponse } from "./RawResponse.mjs";
 import { requestWithRetries } from "./requestWithRetries.mjs";
-import { Supplier } from "./Supplier.mjs";
 function getHeaders(args) {
     return __awaiter(this, void 0, void 0, function* () {
+        var _a;
         const newHeaders = {};
         if (args.body !== undefined && args.contentType != null) {
             newHeaders["Content-Type"] = args.contentType;
@@ -27,7 +28,7 @@ function getHeaders(args) {
             return newHeaders;
         }
         for (const [key, value] of Object.entries(args.headers)) {
-            const result = yield Supplier.get(value);
+            const result = yield EndpointSupplier.get(value, { endpointMetadata: (_a = args.endpointMetadata) !== null && _a !== void 0 ? _a : {} });
             if (typeof result === "string") {
                 newHeaders[key] = result;
                 continue;

package/dist/esm/core/fetcher/HttpResponsePromise.d.mts

@@ -1,4 +1,4 @@
-import { WithRawResponse } from "./RawResponse.mjs";
+import type { WithRawResponse } from "./RawResponse.mjs";
 /**
  * A promise that returns the parsed response and lets you retrieve the raw response too.
  */

package/dist/esm/core/fetcher/index.d.mts

@@ -1,5 +1,7 @@
 export type { APIResponse } from "./APIResponse.mjs";
 export type { BinaryResponse } from "./BinaryResponse.mjs";
+export type { EndpointMetadata } from "./EndpointMetadata.mjs";
+export { EndpointSupplier } from "./EndpointSupplier.mjs";
 export type { Fetcher, FetchFunction } from "./Fetcher.mjs";
 export { fetcher } from "./Fetcher.mjs";
 export { getHeader } from "./getHeader.mjs";

package/dist/esm/core/fetcher/index.mjs

@@ -1,3 +1,4 @@
+export { EndpointSupplier } from "./EndpointSupplier.mjs";
 export { fetcher } from "./Fetcher.mjs";
 export { getHeader } from "./getHeader.mjs";
 export { HttpResponsePromise } from "./HttpResponsePromise.mjs";

package/dist/esm/core/headers.d.mts

@@ -1,3 +1,2 @@
-import * as core from "./index.mjs";
-export declare function mergeHeaders(...headersArray: (Record<string, string | core.Supplier<string | null | undefined> | null | undefined> | null | undefined)[]): Record<string, string | core.Supplier<string | null | undefined>>;
-export declare function mergeOnlyDefinedHeaders(...headersArray: (Record<string, string | core.Supplier<string | null | undefined> | null | undefined> | null | undefined)[]): Record<string, string | core.Supplier<string | null | undefined>>;
+export declare function mergeHeaders<THeaderValue>(...headersArray: (Record<string, THeaderValue> | null | undefined)[]): Record<string, string | THeaderValue>;
+export declare function mergeOnlyDefinedHeaders<THeaderValue>(...headersArray: (Record<string, THeaderValue> | null | undefined)[]): Record<string, THeaderValue>;

package/dist/esm/environments.d.mts

@@ -1,6 +1,3 @@
-/**
- * This file was auto-generated by Fern from our API Definition.
- */
 export declare const phenomlEnvironment: {
     readonly Default: "https://experiment.app.pheno.ml";
 };

package/dist/esm/environments.mjs

@@ -1,6 +1,4 @@
-/**
- * This file was auto-generated by Fern from our API Definition.
- */
+// This file was auto-generated by Fern from our API Definition.
 export const phenomlEnvironment = {
     Default: "https://experiment.app.pheno.ml",
 };

package/dist/esm/errors/phenomlError.d.mts

@@ -1,6 +1,3 @@
-/**
- * This file was auto-generated by Fern from our API Definition.
- */
 import * as core from "../core/index.mjs";
 export declare class phenomlError extends Error {
     readonly statusCode?: number;

package/dist/esm/errors/phenomlError.mjs

@@ -1,6 +1,5 @@
-/**
- * This file was auto-generated by Fern from our API Definition.
- */
+// This file was auto-generated by Fern from our API Definition.
+import * as core from "../core/index.mjs";
 import { toJson } from "../core/json.mjs";
 export class phenomlError extends Error {
     constructor({ message, statusCode, body, rawResponse, }) {

package/dist/esm/errors/phenomlTimeoutError.d.mts

@@ -1,6 +1,3 @@
-/**
- * This file was auto-generated by Fern from our API Definition.
- */
 export declare class phenomlTimeoutError extends Error {
     constructor(message: string);
 }

package/dist/esm/errors/phenomlTimeoutError.mjs

@@ -1,6 +1,4 @@
-/**
- * This file was auto-generated by Fern from our API Definition.
- */
+// This file was auto-generated by Fern from our API Definition.
 export class phenomlTimeoutError extends Error {
     constructor(message) {
         super(message);

package/dist/esm/version.d.mts

@@ -1 +1 @@
-export declare const SDK_VERSION = "0.0.4";
+export declare const SDK_VERSION = "0.0.7";

package/dist/esm/version.mjs

@@ -1 +1 @@
-export const SDK_VERSION = "0.0.4";
+export const SDK_VERSION = "0.0.7";

package/package.json

@@ -1,6 +1,6 @@
 {
     "name": "phenoml",
-    "version": "0.0.4",
+    "version": "0.0.7",
     "private": false,
     "repository": "github:phenoml/phenoml-ts-sdk",
     "type": "commonjs",
@@ -45,7 +45,7 @@
         "@types/jest": "^29.5.14",
         "ts-jest": "^29.3.4",
         "jest-environment-jsdom": "^29.7.0",
-        "msw": "^2.8.4",
+        "msw": "2.11.2",
         "@types/node": "^18.19.70",
         "prettier": "^3.4.2",
         "typescript": "~5.7.2"

package/reference.md

@@ -97,7 +97,10 @@ Retrieves a list of PhenoAgents belonging to the authenticated user
 <dd>
 
 ```typescript
-await client.agent.list();
+await client.agent.list({
+    is_active: true,
+    tags: "tags",
+});
 ```
 
 </dd>
@@ -515,6 +518,9 @@ Retrieves a list of chat messages for a given chat session
 ```typescript
 await client.agent.getChatMessages({
     chat_session_id: "chat_session_id",
+    num_messages: 1,
+    role: "role",
+    order: "asc",
 });
 ```
 
@@ -1481,6 +1487,14 @@ await client.fhir.create("550e8400-e29b-41d4-a716-446655440000", "Patient", {
     "X-Phenoml-On-Behalf-Of": "user@example.com",
     body: {
         resourceType: "Patient",
+        name: [
+            {
+                family: "Doe",
+                given: ["Jane"],
+            },
+        ],
+        gender: "female",
+        birthDate: "1990-01-01",
     },
 });
 ```
@@ -1580,6 +1594,14 @@ await client.fhir.upsert("550e8400-e29b-41d4-a716-446655440000", "Patient", {
     body: {
         resourceType: "Patient",
         id: "123",
+        name: [
+            {
+                family: "Doe",
+                given: ["John", "Updated"],
+            },
+        ],
+        gender: "male",
+        birthDate: "1985-05-15",
     },
 });
 ```
@@ -3414,3 +3436,438 @@ await client.tools.mcpServer.tools.call("mcp_server_tool_id", {
 </dd>
 </dl>
 </details>
+
+## Workflows
+
+<details><summary><code>client.workflows.<a href="/src/api/resources/workflows/client/Client.ts">list</a>({ ...params }) -> phenoml.ListWorkflowsResponse</code></summary>
+<dl>
+<dd>
+
+#### 📝 Description
+
+<dl>
+<dd>
+
+<dl>
+<dd>
+
+Retrieves all workflow definitions for the authenticated user
+
+</dd>
+</dl>
+</dd>
+</dl>
+
+#### 🔌 Usage
+
+<dl>
+<dd>
+
+<dl>
+<dd>
+
+```typescript
+await client.workflows.list({
+    verbose: true,
+});
+```
+
+</dd>
+</dl>
+</dd>
+</dl>
+
+#### ⚙️ Parameters
+
+<dl>
+<dd>
+
+<dl>
+<dd>
+
+**request:** `phenoml.workflows.WorkflowsListRequest`
+
+</dd>
+</dl>
+
+<dl>
+<dd>
+
+**requestOptions:** `Workflows.RequestOptions`
+
+</dd>
+</dl>
+</dd>
+</dl>
+
+</dd>
+</dl>
+</details>
+
+<details><summary><code>client.workflows.<a href="/src/api/resources/workflows/client/Client.ts">create</a>({ ...params }) -> phenoml.CreateWorkflowResponse</code></summary>
+<dl>
+<dd>
+
+#### 📝 Description
+
+<dl>
+<dd>
+
+<dl>
+<dd>
+
+Creates a new workflow definition with graph generation from workflow instructions
+
+</dd>
+</dl>
+</dd>
+</dl>
+
+#### 🔌 Usage
+
+<dl>
+<dd>
+
+<dl>
+<dd>
+
+```typescript
+await client.workflows.create({
+    verbose: true,
+    name: "Patient Data Mapping Workflow",
+    workflow_instructions: "Given diagnosis data, find the patient and create condition record",
+    sample_data: {
+        patient_last_name: "Rippin",
+        patient_first_name: "Clay",
+        diagnosis_code: "I10",
+    },
+    fhir_provider_id: "550e8400-e29b-41d4-a716-446655440000",
+});
+```
+
+</dd>
+</dl>
+</dd>
+</dl>
+
+#### ⚙️ Parameters
+
+<dl>
+<dd>
+
+<dl>
+<dd>
+
+**request:** `phenoml.workflows.CreateWorkflowRequest`
+
+</dd>
+</dl>
+
+<dl>
+<dd>
+
+**requestOptions:** `Workflows.RequestOptions`
+
+</dd>
+</dl>
+</dd>
+</dl>
+
+</dd>
+</dl>
+</details>
+
+<details><summary><code>client.workflows.<a href="/src/api/resources/workflows/client/Client.ts">get</a>(id, { ...params }) -> phenoml.WorkflowsGetResponse</code></summary>
+<dl>
+<dd>
+
+#### 📝 Description
+
+<dl>
+<dd>
+
+<dl>
+<dd>
+
+Retrieves a workflow definition by its ID
+
+</dd>
+</dl>
+</dd>
+</dl>
+
+#### 🔌 Usage
+
+<dl>
+<dd>
+
+<dl>
+<dd>
+
+```typescript
+await client.workflows.get("id", {
+    verbose: true,
+});
+```
+
+</dd>
+</dl>
+</dd>
+</dl>
+
+#### ⚙️ Parameters
+
+<dl>
+<dd>
+
+<dl>
+<dd>
+
+**id:** `string` — ID of the workflow to retrieve
+
+</dd>
+</dl>
+
+<dl>
+<dd>
+
+**request:** `phenoml.workflows.WorkflowsGetRequest`
+
+</dd>
+</dl>
+
+<dl>
+<dd>
+
+**requestOptions:** `Workflows.RequestOptions`
+
+</dd>
+</dl>
+</dd>
+</dl>
+
+</dd>
+</dl>
+</details>
+
+<details><summary><code>client.workflows.<a href="/src/api/resources/workflows/client/Client.ts">update</a>(id, { ...params }) -> phenoml.WorkflowsUpdateResponse</code></summary>
+<dl>
+<dd>
+
+#### 📝 Description
+
+<dl>
+<dd>
+
+<dl>
+<dd>
+
+Updates an existing workflow definition
+
+</dd>
+</dl>
+</dd>
+</dl>
+
+#### 🔌 Usage
+
+<dl>
+<dd>
+
+<dl>
+<dd>
+
+```typescript
+await client.workflows.update("id", {
+    verbose: true,
+    name: "Updated Patient Data Mapping Workflow",
+    workflow_instructions: "Given diagnosis data, find the patient and create condition record",
+    sample_data: {
+        patient_last_name: "Smith",
+        patient_first_name: "John",
+        diagnosis_code: "E11",
+    },
+    fhir_provider_id: "550e8400-e29b-41d4-a716-446655440000",
+});
+```
+
+</dd>
+</dl>
+</dd>
+</dl>
+
+#### ⚙️ Parameters
+
+<dl>
+<dd>
+
+<dl>
+<dd>
+
+**id:** `string` — ID of the workflow to update
+
+</dd>
+</dl>
+
+<dl>
+<dd>
+
+**request:** `phenoml.workflows.UpdateWorkflowRequest`
+
+</dd>
+</dl>
+
+<dl>
+<dd>
+
+**requestOptions:** `Workflows.RequestOptions`
+
+</dd>
+</dl>
+</dd>
+</dl>
+
+</dd>
+</dl>
+</details>
+
+<details><summary><code>client.workflows.<a href="/src/api/resources/workflows/client/Client.ts">delete</a>(id) -> phenoml.WorkflowsDeleteResponse</code></summary>
+<dl>
+<dd>
+
+#### 📝 Description
+
+<dl>
+<dd>
+
+<dl>
+<dd>
+
+Deletes a workflow definition by its ID
+
+</dd>
+</dl>
+</dd>
+</dl>
+
+#### 🔌 Usage
+
+<dl>
+<dd>
+
+<dl>
+<dd>
+
+```typescript
+await client.workflows.delete("id");
+```
+
+</dd>
+</dl>
+</dd>
+</dl>
+
+#### ⚙️ Parameters
+
+<dl>
+<dd>
+
+<dl>
+<dd>
+
+**id:** `string` — ID of the workflow to delete
+
+</dd>
+</dl>
+
+<dl>
+<dd>
+
+**requestOptions:** `Workflows.RequestOptions`
+
+</dd>
+</dl>
+</dd>
+</dl>
+
+</dd>
+</dl>
+</details>
+
+<details><summary><code>client.workflows.<a href="/src/api/resources/workflows/client/Client.ts">execute</a>(id, { ...params }) -> phenoml.ExecuteWorkflowResponse</code></summary>
+<dl>
+<dd>
+
+#### 📝 Description
+
+<dl>
+<dd>
+
+<dl>
+<dd>
+
+Executes a workflow with provided input data and returns results
+
+</dd>
+</dl>
+</dd>
+</dl>
+
+#### 🔌 Usage
+
+<dl>
+<dd>
+
+<dl>
+<dd>
+
+```typescript
+await client.workflows.execute("id", {
+    input_data: {
+        patient_last_name: "Johnson",
+        patient_first_name: "Mary",
+        diagnosis_code: "M79.3",
+        encounter_date: "2024-01-15",
+    },
+});
+```
+
+</dd>
+</dl>
+</dd>
+</dl>
+
+#### ⚙️ Parameters
+
+<dl>
+<dd>
+
+<dl>
+<dd>
+
+**id:** `string` — ID of the workflow to execute
+
+</dd>
+</dl>
+
+<dl>
+<dd>
+
+**request:** `phenoml.workflows.ExecuteWorkflowRequest`
+
+</dd>
+</dl>
+
+<dl>
+<dd>
+
+**requestOptions:** `Workflows.RequestOptions`
+
+</dd>
+</dl>
+</dd>
+</dl>
+
+</dd>
+</dl>
+</details>