oncoprintjs 6.1.3 → 6.1.4

package/dist/index.js

@@ -2862,18 +2862,36 @@ var OncoprintModel = /** @class */ (function () {
             if (nearest_id_index === -1) {
                 return null;
             }
-            // Next, see if it's in a track
+            // Next, see if it's in a track.
+            // Try binary search first for performance, but fall back to linear
+            // scan if the result is invalid. cell_tops may not be monotonically
+            // ordered relative to the tracks array during async clustering
+            // transitions, which causes binary search to return wrong results.
             var tracks = this.getTracks();
             var cell_tops = this.getCellTops();
+            var nearest_track;
             var nearest_track_index = binarysearch(tracks, y, function (track) {
                 return cell_tops[track];
             }, true);
-            if (nearest_track_index === -1) {
-                return null;
+            if (nearest_track_index !== -1) {
+                var candidate = tracks[nearest_track_index];
+                if (y >= cell_tops[candidate] &&
+                    y < cell_tops[candidate] + this.getCellHeight(candidate)) {
+                    nearest_track = candidate;
+                }
+            }
+            if (nearest_track === undefined) {
+                // Binary search failed (tracks out of order) - linear fallback
+                for (var t = 0; t < tracks.length; t++) {
+                    var top_1 = cell_tops[tracks[t]];
+                    if (y >= top_1 &&
+                        y < top_1 + this.getCellHeight(tracks[t])) {
+                        nearest_track = tracks[t];
+                        break;
+                    }
+                }
             }
-            var nearest_track = tracks[nearest_track_index];
-            if (y >= cell_tops[nearest_track] + this.getCellHeight(nearest_track)) {
-                // we know y is past the top of the track (>= cell_tops[nearest_track]), so this checks if y is past the bottom of the track
+            if (nearest_track === undefined) {
                 return null;
             }
             // At this point, we know y is inside a track
@@ -4243,42 +4261,6 @@ function getNumWebGLVertexes(shape) {
     return ret;
 }
 
-/******************************************************************************
-Copyright (c) Microsoft Corporation.
-
-Permission to use, copy, modify, and/or distribute this software for any
-purpose with or without fee is hereby granted.
-
-THE SOFTWARE IS PROVIDED "AS IS" AND THE AUTHOR DISCLAIMS ALL WARRANTIES WITH
-REGARD TO THIS SOFTWARE INCLUDING ALL IMPLIED WARRANTIES OF MERCHANTABILITY
-AND FITNESS. IN NO EVENT SHALL THE AUTHOR BE LIABLE FOR ANY SPECIAL, DIRECT,
-INDIRECT, OR CONSEQUENTIAL DAMAGES OR ANY DAMAGES WHATSOEVER RESULTING FROM
-LOSS OF USE, DATA OR PROFITS, WHETHER IN AN ACTION OF CONTRACT, NEGLIGENCE OR
-OTHER TORTIOUS ACTION, ARISING OUT OF OR IN CONNECTION WITH THE USE OR
-PERFORMANCE OF THIS SOFTWARE.
-***************************************************************************** */
-/* global Reflect, Promise, SuppressedError, Symbol, Iterator */
-
-var extendStatics = function(d, b) {
-    extendStatics = Object.setPrototypeOf ||
-        ({ __proto__: [] } instanceof Array && function (d, b) { d.__proto__ = b; }) ||
-        function (d, b) { for (var p in b) if (Object.prototype.hasOwnProperty.call(b, p)) d[p] = b[p]; };
-    return extendStatics(d, b);
-};
-
-function __extends(d, b) {
-    if (typeof b !== "function" && b !== null)
-        throw new TypeError("Class extends value " + String(b) + " is not a constructor or null");
-    extendStatics(d, b);
-    function __() { this.constructor = d; }
-    d.prototype = b === null ? Object.create(b) : (__.prototype = b.prototype, new __());
-}
-
-typeof SuppressedError === "function" ? SuppressedError : function (error, suppressed, message) {
-    var e = new Error(message);
-    return e.name = "SuppressedError", e.error = error, e.suppressed = suppressed, e;
-};
-
 var default_parameter_values = {
     width: 100,
     height: 100,
@@ -4483,7 +4465,7 @@ var Shape = /** @class */ (function () {
     return Shape;
 }());
 var Rectangle = /** @class */ (function (_super) {
-    __extends(Rectangle, _super);
+    tslib.__extends(Rectangle, _super);
     function Rectangle() {
         return _super !== null && _super.apply(this, arguments) || this;
     }
@@ -4507,7 +4489,7 @@ var Rectangle = /** @class */ (function (_super) {
     return Rectangle;
 }(Shape));
 var Triangle = /** @class */ (function (_super) {
-    __extends(Triangle, _super);
+    tslib.__extends(Triangle, _super);
     function Triangle() {
         return _super !== null && _super.apply(this, arguments) || this;
     }
@@ -4533,7 +4515,7 @@ var Triangle = /** @class */ (function (_super) {
     return Triangle;
 }(Shape));
 var Ellipse = /** @class */ (function (_super) {
-    __extends(Ellipse, _super);
+    tslib.__extends(Ellipse, _super);
     function Ellipse() {
         return _super !== null && _super.apply(this, arguments) || this;
     }
@@ -4557,7 +4539,7 @@ var Ellipse = /** @class */ (function (_super) {
     return Ellipse;
 }(Shape));
 var Line = /** @class */ (function (_super) {
-    __extends(Line, _super);
+    tslib.__extends(Line, _super);
     function Line() {
         return _super !== null && _super.apply(this, arguments) || this;
     }