nmr-processing 9.5.1 → 9.5.2-pre.1686022430

package/lib-esm/types/Peaks/Peak1D.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"Peak1D.js","sourceRoot":"","sources":["../../../src/types/Peaks/Peak1D.ts"],"names":[],"mappings":""}

package/lib-esm/types/Peaks/Peak2D.js

@@ -0,0 +1,2 @@
+export {};
+//# sourceMappingURL=Peak2D.js.map

package/lib-esm/types/Peaks/Peak2D.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"Peak2D.js","sourceRoot":"","sources":["../../../src/types/Peaks/Peak2D.ts"],"names":[],"mappings":""}

package/lib-esm/types/Peaks/Peaks.js

@@ -0,0 +1,2 @@
+export {};
+//# sourceMappingURL=Peaks.js.map

package/lib-esm/types/Peaks/Peaks.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"Peaks.js","sourceRoot":"","sources":["../../../src/types/Peaks/Peaks.ts"],"names":[],"mappings":""}

package/lib-esm/types/Ranges/Ranges.js

@@ -0,0 +1,2 @@
+export {};
+//# sourceMappingURL=Ranges.js.map

package/lib-esm/types/Ranges/Ranges.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"Ranges.js","sourceRoot":"","sources":["../../../src/types/Ranges/Ranges.ts"],"names":[],"mappings":""}

package/lib-esm/types/Signals/Signal.js

@@ -0,0 +1,2 @@
+export {};
+//# sourceMappingURL=Signal.js.map

package/lib-esm/types/Signals/Signal.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"Signal.js","sourceRoot":"","sources":["../../../src/types/Signals/Signal.ts"],"names":[],"mappings":""}

package/lib-esm/types/Signals/Signal1D.js

@@ -0,0 +1,2 @@
+export {};
+//# sourceMappingURL=Signal1D.js.map

package/lib-esm/types/Signals/Signal1D.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"Signal1D.js","sourceRoot":"","sources":["../../../src/types/Signals/Signal1D.ts"],"names":[],"mappings":""}

package/lib-esm/types/Signals/Signal2D.js

@@ -0,0 +1,2 @@
+export {};
+//# sourceMappingURL=Signal2D.js.map

package/lib-esm/types/Signals/Signal2D.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"Signal2D.js","sourceRoot":"","sources":["../../../src/types/Signals/Signal2D.ts"],"names":[],"mappings":""}

package/lib-esm/types/Zones/Zone.js

@@ -0,0 +1,2 @@
+export {};
+//# sourceMappingURL=Zone.js.map

package/lib-esm/types/Zones/Zone.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"Zone.js","sourceRoot":"","sources":["../../../src/types/Zones/Zone.ts"],"names":[],"mappings":""}

package/lib-esm/types/Zones/Zones.js

@@ -0,0 +1,2 @@
+export {};
+//# sourceMappingURL=Zones.js.map

package/lib-esm/types/Zones/Zones.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"Zones.js","sourceRoot":"","sources":["../../../src/types/Zones/Zones.ts"],"names":[],"mappings":""}

package/lib-esm/types/common/MapOptions.js

@@ -0,0 +1,2 @@
+export {};
+//# sourceMappingURL=MapOptions.js.map

package/lib-esm/types/common/MapOptions.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"MapOptions.js","sourceRoot":"","sources":["../../../src/types/common/MapOptions.ts"],"names":[],"mappings":""}

package/lib-esm/utilities/checkData2DFid.js

@@ -0,0 +1,6 @@
+export function checkData2DFid(data) {
+    if (!('re' in data && 'im' in data)) {
+        throw new Error('imaginary (im) data should exists');
+    }
+}
+//# sourceMappingURL=checkData2DFid.js.map

package/lib-esm/utilities/checkData2DFid.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"checkData2DFid.js","sourceRoot":"","sources":["../../src/utilities/checkData2DFid.ts"],"names":[],"mappings":"AAGA,MAAM,UAAU,cAAc,CAC5B,IAAY;IAEZ,IAAI,CAAC,CAAC,IAAI,IAAI,IAAI,IAAI,IAAI,IAAI,IAAI,CAAC,EAAE;QACnC,MAAM,IAAI,KAAK,CAAC,mCAAmC,CAAC,CAAC;KACtD;AACH,CAAC"}

package/lib-esm/utilities/cloneData1D.js

@@ -0,0 +1,5 @@
+export function cloneData1D(datum) {
+    const { x, re, im } = datum || { x: [], re: [], im: [] };
+    return { x: x.slice(), re: re.slice(), im: im?.slice() || null };
+}
+//# sourceMappingURL=cloneData1D.js.map

package/lib-esm/utilities/cloneData1D.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"cloneData1D.js","sourceRoot":"","sources":["../../src/utilities/cloneData1D.ts"],"names":[],"mappings":"AAEA,MAAM,UAAU,WAAW,CAAC,KAAa;IACvC,MAAM,EAAE,CAAC,EAAE,EAAE,EAAE,EAAE,EAAE,GAAG,KAAK,IAAI,EAAE,CAAC,EAAE,EAAE,EAAE,EAAE,EAAE,EAAE,EAAE,EAAE,EAAE,EAAE,EAAE,CAAC;IACzD,OAAO,EAAE,CAAC,EAAE,CAAC,CAAC,KAAK,EAAE,EAAE,EAAE,EAAE,EAAE,CAAC,KAAK,EAAE,EAAE,EAAE,EAAE,EAAE,EAAE,KAAK,EAAE,IAAI,IAAI,EAAE,CAAC;AACnE,CAAC"}

package/lib-esm/utilities/cloneData2D.js

@@ -0,0 +1,24 @@
+export function cloneData2D(data) {
+    const newData = {};
+    if (isData2DFt(data)) {
+        for (const key in data) {
+            addCloneData(newData, key, data[key]);
+        }
+    }
+    else {
+        for (const key in data) {
+            addCloneData(newData, key, data[key]);
+        }
+    }
+    return newData;
+}
+function isData2DFt(data) {
+    return 're' in data;
+}
+function addCloneData(newData, key, data) {
+    if (data) {
+        const { z, ...other } = data;
+        newData[key] = { z: z.slice(), ...other };
+    }
+}
+//# sourceMappingURL=cloneData2D.js.map

package/lib-esm/utilities/cloneData2D.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"cloneData2D.js","sourceRoot":"","sources":["../../src/utilities/cloneData2D.ts"],"names":[],"mappings":"AAEA,MAAM,UAAU,WAAW,CAAC,IAAY;IACtC,MAAM,OAAO,GAAQ,EAAE,CAAC;IAExB,IAAI,UAAU,CAAC,IAAI,CAAC,EAAE;QACpB,KAAK,MAAM,GAAG,IAAI,IAAI,EAAE;YACtB,YAAY,CAAC,OAAO,EAAE,GAAG,EAAE,IAAI,CAAC,GAAqB,CAAC,CAAC,CAAC;SACzD;KACF;SAAM;QACL,KAAK,MAAM,GAAG,IAAI,IAAI,EAAE;YACtB,YAAY,CAAC,OAAO,EAAE,GAAG,EAAE,IAAI,CAAC,GAAsB,CAAC,CAAC,CAAC;SAC1D;KACF;IACD,OAAO,OAAO,CAAC;AACjB,CAAC;AAED,SAAS,UAAU,CAAC,IAAY;IAC9B,OAAO,IAAI,IAAI,IAAI,CAAC;AACtB,CAAC;AAED,SAAS,YAAY,CAAC,OAAY,EAAE,GAAW,EAAE,IAAoB;IACnE,IAAI,IAAI,EAAE;QACR,MAAM,EAAE,CAAC,EAAE,GAAG,KAAK,EAAE,GAAG,IAAI,CAAC;QAC7B,OAAO,CAAC,GAAG,CAAC,GAAG,EAAE,CAAC,EAAE,CAAC,CAAC,KAAK,EAAE,EAAE,GAAG,KAAK,EAAE,CAAC;KAC3C;AACH,CAAC"}

package/lib-esm/utilities/getSum.js

@@ -0,0 +1,20 @@
+/**
+ * Sum values for specific key in the object
+ * @param values array of object
+ * @param key key
+ * @param check custom check function to to indicate if certain object included or not in the summation
+ * @returns number
+ */
+export function getSum(values, key, check = null) {
+    let sum = 0;
+    for (const current of values) {
+        if (check?.(current)) {
+            const value = current[key];
+            if (!value || isNaN(value))
+                continue;
+            sum += Math.abs(value);
+        }
+    }
+    return sum;
+}
+//# sourceMappingURL=getSum.js.map

package/lib-esm/utilities/getSum.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"getSum.js","sourceRoot":"","sources":["../../src/utilities/getSum.ts"],"names":[],"mappings":"AAAA;;;;;;GAMG;AAEH,MAAM,UAAU,MAAM,CACpB,MAAc,EACd,GAAe,EACf,QAA2C,IAAI;IAE/C,IAAI,GAAG,GAAG,CAAC,CAAC;IACZ,KAAK,MAAM,OAAO,IAAI,MAAM,EAAE;QAC5B,IAAI,KAAK,EAAE,CAAC,OAAO,CAAC,EAAE;YACpB,MAAM,KAAK,GAAG,OAAO,CAAC,GAAG,CAAC,CAAC;YAC3B,IAAI,CAAC,KAAK,IAAI,KAAK,CAAC,KAAK,CAAC;gBAAE,SAAS;YACrC,GAAG,IAAI,IAAI,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC;SACxB;KACF;IACD,OAAO,GAAG,CAAC;AACb,CAAC"}

package/lib-esm/xyz/quadrature.js

@@ -0,0 +1,50 @@
+import { xAdd, xMultiply, xSubtract } from 'ml-spectra-processing';
+import { checkData2DFid } from '../utilities/checkData2DFid';
+export function quadrature(data, options) {
+    checkData2DFid(data);
+    const { fnMode } = options;
+    switch (fnMode) {
+        case 'ttpi':
+            return ttpiQuadrature(data);
+        case 'states':
+            return shrQuadrature(data);
+        case 'echo':
+            return echoQuadrature(data);
+        default:
+            return {
+                re: data.re.z,
+                im: data.im.z,
+            };
+    }
+}
+function echoQuadrature(data) {
+    const { re: { z: reMatrix }, im: { z: imMatrix }, } = data;
+    const newRe = [];
+    const newIm = [];
+    for (let i = 0; i < reMatrix.length; i += 2) {
+        let reCosine = reMatrix[i];
+        let imCosine = imMatrix[i];
+        let reSine = reMatrix[i + 1];
+        let imSine = imMatrix[i + 1];
+        newRe.push(xSubtract(xMultiply(imSine, -1), imCosine));
+        newRe.push(xSubtract(reSine, reCosine));
+        newIm.push(xAdd(reSine, reCosine));
+        newIm.push(xSubtract(imSine, imCosine));
+    }
+    return { re: newRe, im: newIm };
+}
+function shrQuadrature(data) {
+    const { re, im } = data;
+    return { re: re.z, im: im.z };
+}
+function ttpiQuadrature(data) {
+    const newRe = [];
+    const newIm = [];
+    const { re: { z: reMatrix }, im: { z: imMatrix }, } = data;
+    for (let i = 0; i < reMatrix.length; i++) {
+        newRe.push(i % 2 ? reMatrix[i].slice() : xMultiply(reMatrix[i], -1));
+        newIm.push(i % 2 ? imMatrix[i].slice() : xMultiply(imMatrix[i], -1));
+    }
+    return { re: newRe, im: newIm };
+}
+//# sourceMappingURL=quadrature.js.map

package/lib-esm/xyz/quadrature.js.map

@@ -0,0 +1 @@
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package/lib-esm/xyz/util/fft2d/digitalFilter.js

@@ -0,0 +1,16 @@
+export function digitalFilter(data, options) {
+    let { digitalFilterValue = 0 } = options;
+    let re = new Float64Array(data.re);
+    let im = new Float64Array(data.im);
+    let pointsToShift = Math.floor(digitalFilterValue);
+    const skip = 0;
+    pointsToShift += 0;
+    const newRe = new Float64Array(re.length);
+    const newIm = new Float64Array(im.length);
+    newRe.set(re.slice(pointsToShift));
+    newRe.set(re.slice(skip, pointsToShift), re.length - pointsToShift);
+    newIm.set(im.slice(pointsToShift));
+    newIm.set(im.slice(skip, pointsToShift), im.length - pointsToShift);
+    return { re: newRe, im: newIm };
+}
+//# sourceMappingURL=digitalFilter.js.map

package/lib-esm/xyz/util/fft2d/digitalFilter.js.map

@@ -0,0 +1 @@
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package/lib-esm/xyz/util/fft2d/fftDirectDimension.js

@@ -0,0 +1,50 @@
+import Matrix from 'ml-matrix';
+import { reimAutoPhaseCorrection, reimFFT, reimPhaseCorrection, } from 'ml-spectra-processing';
+import { apodization, } from '../../../apodization/apodization';
+import { digitalFilter } from './digitalFilter';
+import { removeDCOffset } from './removeDCOffset';
+import { zeroFilling } from './zeroFilling';
+export function fftDirectDimension(data, options) {
+    const { re: reData, im: imData } = data;
+    const nbRows = reData.length;
+    const nbColumns = reData[0].length;
+    const { zeroFilling: zeroFillingF2, digitalFilterValue = 0 } = options;
+    const { factor: f2Factor = 2 } = zeroFillingF2 || {};
+    const nbPointsF2 = zeroFillingF2?.nbPoints || 2 ** Math.round(Math.log2(nbColumns * f2Factor));
+    const reFFT = new Matrix(nbRows, nbPointsF2);
+    const imFFT = new Matrix(nbRows, nbPointsF2);
+    const { apodization: apodizationF2 } = options;
+    let { ph0: ph0F2, ph1: ph1F2, mode: pcModeF2 = 'no', } = options?.phaseCorrection || {};
+    for (let i = 0; i < nbRows; i++) {
+        const newData = digitalFilter({ re: reData[i], im: imData[i] }, { digitalFilterValue });
+        Object.assign(newData, removeDCOffset(newData, { digitalFilterValue }));
+        if (apodizationF2) {
+            const { re: aRe, im: aIm } = apodization(newData, apodizationF2);
+            Object.assign(newData, { re: aRe, im: aIm });
+        }
+        Object.assign(newData, zeroFilling(newData, { digitalFilterValue, nbPoints: nbPointsF2 }));
+        Object.assign(newData, reimFFT(newData, { applyZeroShift: true }));
+        const dfResidual = (digitalFilterValue - Math.round(digitalFilterValue)) * Math.PI * 2;
+        if (dfResidual > 0) {
+            Object.assign(newData, reimPhaseCorrection(newData, 0, -dfResidual));
+        }
+        if (i === 0 &&
+            pcModeF2 === 'pk' &&
+            ph0F2 === undefined &&
+            ph1F2 === undefined) {
+            const phased = reimAutoPhaseCorrection(newData, { magnitudeMode: false });
+            ph0F2 = phased.ph0;
+            ph1F2 = phased.ph1;
+        }
+        if (pcModeF2 === 'pk' && ph0F2 !== undefined && ph1F2 !== undefined) {
+            Object.assign(newData, reimPhaseCorrection(newData, (ph0F2 * Math.PI) / 180, (ph1F2 * Math.PI) / 180));
+        }
+        reFFT.setRow(i, newData.re);
+        imFFT.setRow(i, newData.im);
+    }
+    return {
+        re: reFFT,
+        im: imFFT,
+    };
+}
+//# sourceMappingURL=fftDirectDimension.js.map

package/lib-esm/xyz/util/fft2d/fftDirectDimension.js.map

@@ -0,0 +1 @@
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package/lib-esm/xyz/util/fft2d/fftIndirectDimension.js

@@ -0,0 +1,64 @@
+import Matrix from 'ml-matrix';
+import { reimAbsolute, reimAutoPhaseCorrection, reimFFT, reimPhaseCorrection, } from 'ml-spectra-processing';
+import { apodization, } from '../../../apodization/apodization';
+import { zeroFilling } from './zeroFilling';
+export function fftIndirectDimension(data, options) {
+    const reData = Matrix.checkMatrix(data.re);
+    const imData = Matrix.checkMatrix(data.im);
+    const nbRows = reData.rows;
+    const nbColumns = reData.columns;
+    const { zeroFilling: zeroFillingF1 } = options;
+    const { factor: f1Factor = 2 } = zeroFillingF1 || {};
+    const nbPointsF1 = zeroFillingF1?.nbPoints || 2 ** Math.round(Math.log2(nbRows * f1Factor));
+    const { apodization: apodizationF1 } = options;
+    let { ph0: ph0F1, ph1: ph1F1, mode: pcModeF1, } = options.phaseCorrection || {};
+    const reResult = new Matrix(nbPointsF1, nbColumns);
+    const imResult = new Matrix(nbPointsF1, nbColumns);
+    for (let i = 0; i < nbColumns; i++) {
+        const { re: aRe, im: aIm } = apodization({
+            re: reData.getColumn(i),
+            im: imData.getColumn(i),
+        }, apodizationF1);
+        const newRe = [];
+        const newIm = [];
+        if (options.fnMode === 'echo') {
+            for (let j = 0; j < aRe.length; j += 2) {
+                newRe.push(aRe[j]);
+                newIm.push(aRe[j + 1]);
+            }
+        }
+        else {
+            for (let j = 0; j < aRe.length; j++) {
+                newRe.push(aRe[j]);
+                newIm.push(-aIm[j]);
+            }
+        }
+        let transformed = reimFFT(zeroFilling({
+            re: newRe,
+            im: newIm,
+        }, { digitalFilterValue: 0, nbPoints: nbPointsF1 }), { applyZeroShift: true });
+        let { re, im } = transformed;
+        if (options.phaseCorrection?.mode === 'mc') {
+            re = reimAbsolute({ re, im });
+            im = new Float64Array(im.length);
+        }
+        if (pcModeF1 === 'pk') {
+            if (i === 0 && ph0F1 === undefined && ph1F1 === undefined) {
+                //here we can improve it by checking if the experiment is phase sensitive.
+                const phased = reimAutoPhaseCorrection({ re, im }, { magnitudeMode: false });
+                ph0F1 = phased.ph0;
+                ph1F1 = phased.ph1;
+            }
+            if (ph0F1 !== undefined && ph1F1 !== undefined) {
+                Object.assign(transformed, reimPhaseCorrection(transformed, (ph0F1 * Math.PI) / 180, (ph1F1 * Math.PI) / 180));
+            }
+        }
+        reResult.setColumn(i, re);
+        imResult.setColumn(i, im);
+    }
+    return {
+        re: reResult,
+        im: imResult,
+    };
+}
+//# sourceMappingURL=fftIndirectDimension.js.map

package/lib-esm/xyz/util/fft2d/fftIndirectDimension.js.map

@@ -0,0 +1 @@
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package/lib-esm/xyz/util/fft2d/removeDCOffset.js

@@ -0,0 +1,15 @@
+import { xMean } from 'ml-spectra-processing';
+export function removeDCOffset(data, options) {
+    let { digitalFilterValue = 0 } = options;
+    const nbPoints = data.re.length;
+    const newRe = new Float64Array(data.re);
+    const newIm = new Float64Array(data.im);
+    const averageRe = xMean(data.re.slice((nbPoints * 0.75) >> 0, nbPoints - digitalFilterValue));
+    const averageIm = xMean(data.im.slice((nbPoints * 0.75) >> 0, nbPoints - digitalFilterValue));
+    for (let i = digitalFilterValue; i < nbPoints - digitalFilterValue; i++) {
+        newRe[i] -= averageRe;
+        newIm[i] -= averageIm;
+    }
+    return { re: newRe, im: newIm };
+}
+//# sourceMappingURL=removeDCOffset.js.map

package/lib-esm/xyz/util/fft2d/removeDCOffset.js.map

@@ -0,0 +1 @@
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package/lib-esm/xyz/util/fft2d/zeroFilling.js

@@ -0,0 +1,25 @@
+export function zeroFilling(data, options) {
+    let { nbPoints, factor = 2, digitalFilterValue: grpdly = 0 } = options;
+    if (!nbPoints) {
+        nbPoints = 2 ** Math.round(Math.log2(data.re.length * factor));
+    }
+    let pointsToShift;
+    if (grpdly > 0) {
+        pointsToShift = Math.floor(grpdly);
+    }
+    else {
+        pointsToShift = 0;
+    }
+    const { re, im } = data;
+    let newRE = new Float64Array(nbPoints);
+    let newIM = new Float64Array(nbPoints);
+    const length = Math.min(nbPoints, re.length);
+    newRE.set(re.slice(0, length - pointsToShift));
+    newIM.set(im.slice(0, length - pointsToShift));
+    if (pointsToShift > 0 && pointsToShift < nbPoints) {
+        newRE.set(re.slice(re.length - pointsToShift), nbPoints - pointsToShift);
+        newIM.set(im.slice(re.length - pointsToShift), nbPoints - pointsToShift);
+    }
+    return { re: newRE, im: newIM };
+}
+//# sourceMappingURL=zeroFilling.js.map

package/lib-esm/xyz/util/fft2d/zeroFilling.js.map

@@ -0,0 +1 @@
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package/lib-esm/xyz/util/padData.js

@@ -1,4 +1,3 @@
-import Matrix from 'ml-matrix';
 export function padData(spectraData, options) {
     let { minX, maxX, minY, maxY } = spectraData;
     const width = options.width;
@@ -14,14 +13,18 @@ export function padData(spectraData, options) {
         yDiff++;
     let xOffset = xDiff / 2;
     let yOffset = yDiff / 2;
-    let newMatrix = Matrix.zeros(nbSubSpectra + yDiff, nbPoints + xDiff);
+    const newMatrix = [];
+    for (let i = 0; i < nbSubSpectra + yDiff; i++) {
+        newMatrix.push(new Float64Array(nbPoints + xDiff));
+    }
     for (let i = 0; i < nbSubSpectra; i++) {
         for (let j = 0; j < nbPoints; j++) {
-            newMatrix.set(i + yOffset, j + xOffset, spectraData.z[i][j]);
+            newMatrix[i + yOffset].set(spectraData.z[i], xOffset);
         }
     }
     return {
-        z: newMatrix.to2DArray(),
+        ...spectraData,
+        z: newMatrix,
         minX: minX - xOffset * xInterval,
         maxX: maxX + xOffset * xInterval,
         minY: minY - yOffset * yInterval,

package/lib-esm/xyz/util/padData.js.map

@@ -1 +1 @@
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+{"version":3,"file":"xyzAutoSignalsPicking.js","sourceRoot":"","sources":["../../src/xyz/xyzAutoSignalsPicking.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,EAAE,IAAI,UAAU,EAAE,MAAM,cAAc,CAAC;AAEhD,OAAO,KAAK,WAAW,MAAM,uBAAuB,CAAC;AACrD,OAAO,KAAK,iBAAiB,MAAM,wBAAwB,CAAC;AAE5D,OAAO,gBAAgB,MAAM,sBAAsB,CAAC;AAEpD,OAAO,EAAE,aAAa,EAAE,MAAM,6BAA6B,CAAC;AAC5D,OAAO,EAAE,gBAAgB,EAAE,MAAM,gCAAgC,CAAC;AAClE,OAAO,EAAE,SAAS,EAAE,MAAM,yBAAyB,CAAC;AAEpD,OAAO,KAAK,aAAa,MAAM,6BAA6B,CAAC;AAI7D,OAAO,EAAE,OAAO,EAAE,MAAM,gBAAgB,CAAC;AAEzC,MAAM,WAAW,GAAG;IAClB,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC;IAC3B,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC;IAC3B,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC;IAC3B,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,EAAE,CAAC,EAAE,EAAE,CAAC,EAAE,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC;IACjC,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,EAAE,CAAC,EAAE,EAAE,CAAC,EAAE,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC;IACjC,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,EAAE,CAAC,EAAE,EAAE,CAAC,EAAE,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC;IACjC,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC;IAC3B,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC;IAC3B,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC;CAC5B,CAAC;AA+DF,MAAM,UAAU,qBAAqB,CACnC,WAA0B,EAC1B,OAAqC;IAErC,IAAI,EACF,SAAS,GAAG,EAAE,EACd,gBAAgB,GAAG,IAAI,EACvB,eAAe,GAAG,GAAG,EACrB,MAAM,GAAG,CAAC,IAAI,EAAE,IAAI,CAAC,EACrB,mBAAmB,EACnB,eAAe,GAAG,KAAK,EACvB,KAAK,GAAG,IAAI,EACZ,gBAAgB,GAAG,IAAI,EACvB,UAAU,GAAG,CAAC,EAAE,EAAE,EAAE,CAAC,EACrB,gBAAgB,GAAG,IAAI,EACvB,MAAM,EAAE,aAAa,GACtB,GAAG,OAAO,CAAC;IAEZ,IACE,CAAC,KAAK,CAAC,OAAO,CAAC,mBAAmB,CAAC;QACnC,CAAC,WAAW,CAAC,MAAM,CAAC,mBAAmB,CAAC,EACxC;QACA,MAAM,IAAI,KAAK,CAAC,kCAAkC,CAAC,CAAC;KACrD;IAED,eAAe,GAAG,eAAe,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,GAAG,CAAC,eAAe,CAAC,CAAC;IAExE,IAAI,QAAQ,GAAG,WAAW,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,MAAM,CAAC;IACvC,IAAI,YAAY,GAAG,WAAW,CAAC,CAAC,CAAC,MAAM,CAAC;IAExC,IAAI,YAAY,GAAG,SAAS,EAAE;QAC5B,WAAW,GAAG,OAAO,CAAC,WAAW,EAAE,EAAE,KAAK,EAAE,SAAS,EAAE,CAAC,CAAC;QACzD,QAAQ,GAAG,WAAW,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,MAAM,CAAC;QACnC,YAAY,GAAG,WAAW,CAAC,CAAC,CAAC,MAAM,CAAC;KACrC;IAED,IAAI,YAAY,GAAG,IAAI,YAAY,CAAC,QAAQ,GAAG,YAAY,CAAC,CAAC;IAC7D,IAAI,YAAY,GAAG,IAAI,YAAY,CAAC,QAAQ,GAAG,YAAY,CAAC,CAAC;IAE7D,KAAK,IAAI,WAAW,GAAG,CAAC,EAAE,WAAW,GAAG,YAAY,EAAE,WAAW,EAAE,EAAE;QACnE,IAAI,QAAQ,GAAG,WAAW,CAAC,CAAC,CAAC,WAAW,CAAC,CAAC;QAC1C,KAAK,IAAI,IAAI,GAAG,CAAC,EAAE,IAAI,GAAG,QAAQ,EAAE,IAAI,EAAE,EAAE;YAC1C,IAAI,KAAK,GAAG,WAAW,GAAG,QAAQ,GAAG,IAAI,CAAC;YAC1C,YAAY,CAAC,KAAK,CAAC,GAAG,IAAI,CAAC,GAAG,CAAC,QAAQ,CAAC,IAAI,CAAC,CAAC,CAAC;YAC/C,YAAY,CAAC,KAAK,CAAC,GAAG,QAAQ,CAAC,IAAI,CAAC,CAAC,CAAC,8CAA8C;SACrF;KACF;IAED,MAAM,MAAM,GAAG,aAAa,CAAC,CAAC,CAAC,SAAS,CAAC,aAAa,CAAC,CAAC,CAAC,CAAC,WAAW,CAAC;IAEtE,IAAI,kBAAkB,GAAG,gBAAgB;QACvC,CAAC,CAAC,WAAW,CAAC,GAAG,CAAC,YAAY,EAAE,MAAM,EAAE;YACpC,IAAI,EAAE,YAAY;YAClB,IAAI,EAAE,QAAQ;SACf,CAAC;QACJ,CAAC,CAAC,WAAW,CAAC,MAAM,CAAC,YAAY,EAAE,MAAM,EAAE;YACvC,IAAI,EAAE,YAAY;YAClB,IAAI,EAAE,QAAQ;SACf,CAAC,CAAC;IAEP,IAAI,QAAQ,GAAG,iBAAiB,CAAC,iBAAiB,CAAC,YAAY,EAAE;QAC/D,YAAY;QACZ,YAAY,EAAE,kBAAkB;QAChC,IAAI,EAAE,YAAY;QAClB,IAAI,EAAE,QAAQ;QACd,OAAO,EAAE,eAAe;KACzB,CAAC,CAAC;IAEH,IAAI,KAAK,EAAE;QACT,sEAAsE;QACtE,QAAQ,GAAG,aAAa,CAAC,KAAK,CAAC,QAAQ,EAAE,gBAAgB,CAAC,CAAC;KAC5D;IAED,IAAI,OAAO,GAAG,eAAe,CAAC,aAAa,CAAC,QAAQ,CAAC,EAAE;QACrD,KAAK,EAAE,YAAY;QACnB,KAAK,EAAE,QAAQ;QACf,IAAI,EAAE,WAAW,CAAC,IAAI;QACtB,IAAI,EAAE,WAAW,CAAC,IAAI;QACtB,IAAI,EAAE,WAAW,CAAC,IAAI;QACtB,IAAI,EAAE,WAAW,CAAC,IAAI;QACtB,YAAY;QACZ,YAAY;QACZ,UAAU;QACV,MAAM;QACN,mBAAmB;QACnB,gBAAgB;KACjB,CAAC,CAAC;IAEH,IAAI,eAAe,EAAE;QACnB,OAAO,GAAG,aAAa,CAAC,eAAe,CAAC,OAAO,CAAC,CAAC;KAClD;IAED,OAAO,OAAO,CAAC;AACjB,CAAC;AAuBD,SAAS,eAAe,CACtB,KAAU,EACV,OAA+B;IAE/B,IAAI,EACF,KAAK,EACL,KAAK,EACL,YAAY,EACZ,YAAY,EACZ,mBAAmB,EACnB,UAAU,EACV,MAAM,EACN,gBAAgB,EAChB,IAAI,EACJ,IAAI,EACJ,IAAI,EACJ,IAAI,GACL,GAAG,OAAO,CAAC;IAEZ,IAAI,CAAC,QAAQ,EAAE,QAAQ,CAAC,GAAG,MAAM,CAAC;IAClC,IAAI,CAAC,UAAU,EAAE,UAAU,CAAC,GAAG,UAAU,CAAC;IAC1C,IAAI,CAAC,iBAAiB,EAAE,iBAAiB,CAAC,GAAG,mBAAmB,CAAC;IAEjE,IAAI,EAAE,GAAG,CAAC,IAAI,GAAG,IAAI,CAAC,GAAG,CAAC,KAAK,GAAG,CAAC,CAAC,CAAC;IACrC,IAAI,EAAE,GAAG,CAAC,IAAI,GAAG,IAAI,CAAC,GAAG,CAAC,KAAK,GAAG,CAAC,CAAC,CAAC;IAErC,IAAI,gBAAgB,EAAE;QACpB,KAAK,GAAG,gBAAgB,CAAC,KAAK,EAAE;YAC9B,KAAK;YACL,YAAY;YACZ,YAAY;YACZ,IAAI;YACJ,IAAI;YACJ,IAAI;YACJ,IAAI;SACL,CAAC,CAAC;KACJ;IAED,KAAK,IAAI,CAAC,GAAG,KAAK,CAAC,MAAM,GAAG,CAAC,EAAE,CAAC,IAAI,CAAC,EAAE,CAAC,EAAE,EAAE;QAC1C,IAAI,EAAE,CAAC,EAAE,CAAC,EAAE,GAAG,KAAK,CAAC,CAAC,CAAC,CAAC;QACxB,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,GAAG,IAAI,GAAG,EAAE,GAAG,CAAC,CAAC;QAC3B,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,GAAG,IAAI,GAAG,EAAE,GAAG,CAAC,CAAC;QAC3B,KAAK,CAAC,CAAC,CAAC,CAAC,IAAI,GAAG,IAAI,GAAG,EAAE,GAAG,KAAK,CAAC,C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package/lib-esm/xyz/xyzAutoZonesPicking.js.map

@@ -1 +1 @@
-{"version":3,"file":"xyzAutoZonesPicking.js","sourceRoot":"","sources":["../../src/xyz/xyzAutoZonesPicking.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,qBAAqB,EAAE,MAAM,IAAI,CAAC;AAK3C,OAAO,EAAE,WAAW,EAAE,MAAM,mBAAmB,CAAC;AAmEhD,MAAM,UAAU,mBAAmB,CACjC,WAAmB,EACnB,OAAmC;IAEnC,MAAM,OAAO,GAAG,qBAAqB,CAAC,WAAW,EAAE,OAAO,CAAC,CAAC;IAC5D,OAAO,WAAW,CAAC,OAAO,CAAC,CAAC;AAC9B,CAAC"}
+{"version":3,"file":"xyzAutoZonesPicking.js","sourceRoot":"","sources":["../../src/xyz/xyzAutoZonesPicking.ts"],"names":[],"mappings":"AAEA,OAAO,EAAE,qBAAqB,EAAE,MAAM,IAAI,CAAC;AAK3C,OAAO,EAAE,WAAW,EAAE,MAAM,mBAAmB,CAAC;AA2DhD,MAAM,UAAU,mBAAmB,CACjC,WAA0B,EAC1B,OAAmC;IAEnC,MAAM,OAAO,GAAG,qBAAqB,CAAC,WAAW,EAAE,OAAO,CAAC,CAAC;IAC5D,OAAO,WAAW,CAAC,OAAO,CAAC,CAAC;AAC9B,CAAC"}

package/lib-esm/xyz/xyzBidimensionalFFT.js

@@ -0,0 +1,75 @@
+import { quadrature } from './quadrature';
+import { fftDirectDimension, } from './util/fft2d/fftDirectDimension';
+import { fftIndirectDimension, } from './util/fft2d/fftIndirectDimension';
+export function xyzBidimensionalFFT(data, options) {
+    ensureData2DFid(data);
+    const { info, fnMode, digitalFilterValue = 0, zeroFilling: zeroFillingGeneral, } = options;
+    const orderedData = quadrature(data, { fnMode });
+    const { re: reData } = orderedData;
+    const nbRows = reData.length;
+    const nbColumns = reData[0].length;
+    const { direct = {}, indirect = {} } = options;
+    const { zeroFilling: zeroFillingF2 = zeroFillingGeneral } = direct;
+    const { factor: f2Factor = 2 } = zeroFillingF2 || {};
+    const nbPointsF2 = zeroFillingF2?.nbPoints || 2 ** Math.round(Math.log2(nbColumns * f2Factor));
+    const transformed = fftDirectDimension(orderedData, {
+        ...direct,
+        fnMode,
+        digitalFilterValue,
+        zeroFilling: { nbPoints: nbPointsF2 },
+    });
+    const { zeroFilling: zeroFillingF1 } = options;
+    const { factor: f1Factor = 2 } = zeroFillingF1 || {};
+    const nbPointsF1 = zeroFillingF1?.nbPoints || 2 ** Math.round(Math.log2(nbRows * f1Factor));
+    const { re: reResult, im: imResult } = fftIndirectDimension(transformed, {
+        ...indirect,
+        fnMode,
+        zeroFilling: { nbPoints: nbPointsF1 },
+    });
+    const minMaxXY = getMinMaxXY(info);
+    return {
+        re: {
+            z: convertToDoubleArray(reResult),
+            maxZ: reResult.max(),
+            minZ: reResult.min(),
+            ...minMaxXY,
+        },
+        im: {
+            z: convertToDoubleArray(imResult),
+            maxZ: imResult.max(),
+            minZ: imResult.min(),
+            ...minMaxXY,
+        },
+    };
+}
+function ensureData2DFid(data) {
+    if (!('re' in data)) {
+        throw new Error('bidimensional FFT only can be applied to raw data');
+    }
+}
+function convertToDoubleArray(data) {
+    const result = new Array(data.rows);
+    for (let i = 0; i < data.rows; i++) {
+        result[i] = new Float64Array(data.getRow(i));
+    }
+    return result;
+}
+function getMinMaxXY(info) {
+    const min = [];
+    const max = [];
+    for (let i = 0; i < info.baseFrequency.length; i++) {
+        const baseFrequency = Number.parseFloat(info.baseFrequency[i]);
+        const frequencyOffset = Number.parseFloat(info.frequencyOffset[i]);
+        const spectralWidth = Number.parseFloat(info.spectralWidth[i]);
+        const offset = frequencyOffset / baseFrequency;
+        min.push(offset - spectralWidth * 0.5);
+        max.push(offset + spectralWidth * 0.5);
+    }
+    return {
+        minX: min[0],
+        maxX: max[0],
+        minY: min[1],
+        maxY: max[1],
+    };
+}
+//# sourceMappingURL=xyzBidimensionalFFT.js.map

package/lib-esm/xyz/xyzBidimensionalFFT.js.map

@@ -0,0 +1 @@
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