nmr-processing 9.5.0 → 9.5.1-pre.1684857934

package/lib/apodization/apodization.d.ts

@@ -6,17 +6,22 @@ export interface DataReIm {
     /** Array of im values */
     im: DoubleArray;
 }
-interface ApodizationOptions {
+export interface ApodizationOptions {
     /**
      * number of points at the end of the shape to apply the window function inverted
      * @default 0
      */
     pointsToShift?: number;
-    compose: ShapeOptions;
+    compose?: ShapeOptions;
 }
-export declare function apodization(data: DataReIm, options: ApodizationOptions): {
+export declare function apodization(data: DataReIm, options?: ApodizationOptions): {
+    windowData: never[];
+    /** Array of re values */
+    re: DoubleArray;
+    /** Array of im values */
+    im: DoubleArray;
+} | {
     re: DoubleArray;
     im: DoubleArray;
     windowData: Float64Array;
 };
-export {};

package/lib/apodization/apodization.js

@@ -3,8 +3,10 @@ Object.defineProperty(exports, "__esModule", { value: true });
 exports.apodization = void 0;
 const applyWindow_1 = require("./applyWindow");
 const compose_1 = require("./compose");
-function apodization(data, options) {
+function apodization(data, options = {}) {
     const { compose: composeOptions, pointsToShift } = options;
+    if (!composeOptions)
+        return { ...data, windowData: [] };
     const windowData = (0, compose_1.compose)(composeOptions);
     const applyWindowOptions = {
         windowData,

package/lib/apodization/apodization.js.map

@@ -1 +1 @@
-{"version":3,"file":"apodization.js","sourceRoot":"","sources":["../../src/apodization/apodization.ts"],"names":[],"mappings":";;;AAEA,+CAA4C;AAC5C,uCAAkD;AAiBlD,SAAgB,WAAW,CAAC,IAAc,EAAE,OAA2B;IACrE,MAAM,EAAE,OAAO,EAAE,cAAc,EAAE,aAAa,EAAE,GAAG,OAAO,CAAC;IAC3D,MAAM,UAAU,GAAG,IAAA,iBAAO,EAAC,cAAc,CAAC,CAAC;IAE3C,MAAM,kBAAkB,GAAG;QACzB,UAAU;QACV,aAAa;KACd,CAAC;IAEF,MAAM,EAAE,GAAG,IAAA,yBAAW,EAAC,IAAI,CAAC,EAAE,EAAE,kBAAkB,CAAC,CAAC;IACpD,MAAM,EAAE,GAAG,IAAA,yBAAW,EAAC,IAAI,CAAC,EAAE,EAAE,kBAAkB,CAAC,CAAC;IAEpD,OAAO,EAAE,EAAE,EAAE,EAAE,EAAE,UAAU,EAAE,CAAC;AAChC,CAAC;AAbD,kCAaC"}
+{"version":3,"file":"apodization.js","sourceRoot":"","sources":["../../src/apodization/apodization.ts"],"names":[],"mappings":";;;AAEA,+CAA4C;AAC5C,uCAAkD;AAiBlD,SAAgB,WAAW,CAAC,IAAc,EAAE,UAA8B,EAAE;IAC1E,MAAM,EAAE,OAAO,EAAE,cAAc,EAAE,aAAa,EAAE,GAAG,OAAO,CAAC;IAE3D,IAAI,CAAC,cAAc;QAAE,OAAO,EAAE,GAAG,IAAI,EAAE,UAAU,EAAE,EAAE,EAAE,CAAC;IAExD,MAAM,UAAU,GAAG,IAAA,iBAAO,EAAC,cAAc,CAAC,CAAC;IAE3C,MAAM,kBAAkB,GAAG;QACzB,UAAU;QACV,aAAa;KACd,CAAC;IACF,MAAM,EAAE,GAAG,IAAA,yBAAW,EAAC,IAAI,CAAC,EAAE,EAAE,kBAAkB,CAAC,CAAC;IACpD,MAAM,EAAE,GAAG,IAAA,yBAAW,EAAC,IAAI,CAAC,EAAE,EAAE,kBAAkB,CAAC,CAAC;IAEpD,OAAO,EAAE,EAAE,EAAE,EAAE,EAAE,UAAU,EAAE,CAAC;AAChC,CAAC;AAfD,kCAeC"}

package/lib/apodization/applyWindow.js.map

@@ -1 +1 @@
-{"version":3,"file":"applyWindow.js","sourceRoot":"","sources":["../../src/apodization/applyWindow.ts"],"names":[],"mappings":";;;AA0BA;;GAEG;AACH,SAAgB,WAAW,CAAC,IAAiB,EAAE,OAA2B;IACxE,MAAM,UAAU,GAAG,IAAI,CAAC,MAAM,CAAC;IAE/B,MAAM,EACJ,UAAU,EACV,KAAK,GAAG,CAAC,EACT,MAAM,GAAG,UAAU,EACnB,aAAa,GAAG,CAAC,EACjB,MAAM,GAAG,IAAI,YAAY,CAAC,IAAI,CAAC,GAChC,GAAG,OAAO,CAAC;IAEZ,MAAM,aAAa,GAAG,IAAI,CAAC,GAAG,CAAC,KAAK,GAAG,MAAM,EAAE,UAAU,GAAG,aAAa,CAAC,CAAC;IAC3E,KAAK,IAAI,CAAC,GAAG,KAAK,EAAE,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,aAAa,EAAE,CAAC,EAAE,EAAE;QACjD,MAAM,CAAC,CAAC,CAAC,IAAI,UAAU,CAAC,CAAC,EAAE,CAAC,CAAC;KAC9B;IAED,KAAK,IAAI,CAAC,GAAG,UAAU,GAAG,CAAC,EAAE,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,UAAU,GAAG,aAAa,GAAG,CAAC,EAAE,CAAC,EAAE,EAAE;QAC3E,MAAM,CAAC,CAAC,CAAC,IAAI,UAAU,CAAC,CAAC,EAAE,CAAC,CAAC;KAC9B;IAED,OAAO,MAAM,CAAC;AAChB,CAAC;AArBD,kCAqBC"}
+{"version":3,"file":"applyWindow.js","sourceRoot":"","sources":["../../src/apodization/applyWindow.ts"],"names":[],"mappings":";;;AA0BA;;GAEG;AACH,SAAgB,WAAW,CAAC,IAAiB,EAAE,OAA2B;IACxE,MAAM,UAAU,GAAG,IAAI,CAAC,MAAM,CAAC;IAE/B,MAAM,EACJ,UAAU,EACV,KAAK,GAAG,CAAC,EACT,MAAM,GAAG,UAAU,EACnB,aAAa,GAAG,CAAC,EACjB,MAAM,GAAG,IAAI,YAAY,CAAC,IAAI,CAAC,GAChC,GAAG,OAAO,CAAC;IAEZ,MAAM,aAAa,GAAG,IAAI,CAAC,GAAG,CAAC,KAAK,GAAG,MAAM,EAAE,UAAU,GAAG,aAAa,CAAC,CAAC;IAC3E,KAAK,IAAI,CAAC,GAAG,KAAK,EAAE,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,aAAa,EAAE,CAAC,EAAE,EAAE;QACjD,MAAM,CAAC,CAAC,CAAC,IAAI,UAAU,CAAC,CAAC,EAAE,CAAC,CAAC;KAC9B;IACD,KAAK,IAAI,CAAC,GAAG,UAAU,GAAG,CAAC,EAAE,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,UAAU,GAAG,aAAa,GAAG,CAAC,EAAE,CAAC,EAAE,EAAE;QAC3E,MAAM,CAAC,CAAC,CAAC,IAAI,UAAU,CAAC,CAAC,EAAE,CAAC,CAAC;KAC9B;IAED,OAAO,MAAM,CAAC;AAChB,CAAC;AApBD,kCAoBC"}

package/lib/apodization/compose.js.map

@@ -1 +1 @@
-{"version":3,"file":"compose.js","sourceRoot":"","sources":["../../src/apodization/compose.ts"],"names":[],"mappings":";;;AAAA,+CAA4C;AAC5C,+CAA4C;AAE5C,6CAA0C;AAyB1C,SAAgB,OAAO,CAAC,YAA0B;IAChD,MAAM,EAAE,MAAM,EAAE,UAAU,EAAE,MAAM,GAAG,EAAE,EAAE,GAAG,YAAY,CAAC;IACzD,IAAI,IAAI,GAAG,IAAI,YAAY,CAAC,UAAU,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IAChD,MAAM,CAAC,OAAO,CAAC,CAAC,OAAO,EAAE,EAAE;QACzB,MAAM,EAAE,KAAK,EAAE,KAAK,GAAG,CAAC,EAAE,GAAG,OAAO,CAAC;QACrC,MAAM,EAAE,OAAO,EAAE,YAAY,EAAE,GAAG,KAAK,CAAC;QACxC,MAAM,MAAM,GACV,QAAQ,IAAI,YAAY,CAAC,CAAC,CAAC,YAAY,CAAC,MAAM,CAAC,CAAC,CAAC,UAAU,GAAG,KAAK,CAAC;QAEtE,MAAM,UAAU,GAAG,IAAA,iBAAO,EAAC,IAAA,yBAAW,EAAC,KAAK,CAAC,EAAE,MAAM,CAAC,CAAC;QACvD,IAAA,yBAAW,EAAC,IAAI,EAAE;YAChB,UAAU;YACV,MAAM;YACN,KAAK;YACL,MAAM,EAAE,IAAI;SACb,CAAC,CAAC;IACL,CAAC,CAAC,CAAC;IACH,OAAO,IAAI,CAAC;AACd,CAAC;AAlBD,0BAkBC"}
+{"version":3,"file":"compose.js","sourceRoot":"","sources":["../../src/apodization/compose.ts"],"names":[],"mappings":";;;AAAA,+CAA4C;AAC5C,+CAA4C;AAE5C,6CAA0C;AAyB1C,SAAgB,OAAO,CAAC,YAA0B;IAChD,MAAM,EAAE,MAAM,EAAE,UAAU,EAAE,MAAM,GAAG,EAAE,EAAE,GAAG,YAAY,CAAC;IACzD,IAAI,IAAI,GAAG,IAAI,YAAY,CAAC,UAAU,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IAChD,MAAM,CAAC,OAAO,CAAC,CAAC,OAAO,EAAE,EAAE;QACzB,MAAM,EAAE,KAAK,EAAE,KAAK,GAAG,CAAC,EAAE,GAAG,OAAO,CAAC;QACrC,MAAM,EAAE,OAAO,EAAE,YAAY,EAAE,GAAG,KAAK,CAAC;QACxC,MAAM,MAAM,GACV,QAAQ,IAAI,YAAY,CAAC,CAAC,CAAC,YAAY,CAAC,MAAM,CAAC,CAAC,CAAC,UAAU,GAAG,KAAK,CAAC;QAEtE,MAAM,UAAU,GAAG,IAAA,iBAAO,EAAC,IAAA,yBAAW,EAAC,KAAK,CAAC,EAAE,MAAM,CAAC,CAAC;QAEvD,IAAA,yBAAW,EAAC,IAAI,EAAE;YAChB,UAAU;YACV,MAAM;YACN,KAAK;YACL,MAAM,EAAE,IAAI;SACb,CAAC,CAAC;IACL,CAAC,CAAC,CAAC;IACH,OAAO,IAAI,CAAC;AACd,CAAC;AAnBD,0BAmBC"}

package/lib/apodization/getFunction.js

@@ -3,6 +3,7 @@ Object.defineProperty(exports, "__esModule", { value: true });
 exports.getFunction = void 0;
 const exponential_1 = require("./shapes/exponential");
 const lorentzToGauss_1 = require("./shapes/lorentzToGauss");
+const sineBell_1 = require("./shapes/sineBell");
 function getFunction(shape) {
     const { kind, options } = shape;
     switch (kind) {
@@ -10,6 +11,8 @@ function getFunction(shape) {
             return (0, exponential_1.exponential)(options);
         case 'lorentzToGauss':
             return (0, lorentzToGauss_1.lorentzToGauss)(options);
+        case 'sineBell':
+            return (0, sineBell_1.sineBell)(options);
         default:
             throw Error(`Unknown distribution ${kind}`);
     }

package/lib/apodization/getFunction.js.map

@@ -1 +1 @@
-{"version":3,"file":"getFunction.js","sourceRoot":"","sources":["../../src/apodization/getFunction.ts"],"names":[],"mappings":";;;AACA,sDAAmD;AACnD,4DAAyD;AAEzD,SAAgB,WAAW,CAAC,KAAsB;IAChD,MAAM,EAAE,IAAI,EAAE,OAAO,EAAE,GAAG,KAAK,CAAC;IAChC,QAAQ,IAAI,EAAE;QACZ,KAAK,aAAa;YAChB,OAAO,IAAA,yBAAW,EAAC,OAAO,CAAC,CAAC;QAC9B,KAAK,gBAAgB;YACnB,OAAO,IAAA,+BAAc,EAAC,OAAO,CAAC,CAAC;QACjC;YACE,MAAM,KAAK,CAAC,wBAAwB,IAAc,EAAE,CAAC,CAAC;KACzD;AACH,CAAC;AAVD,kCAUC"}
+{"version":3,"file":"getFunction.js","sourceRoot":"","sources":["../../src/apodization/getFunction.ts"],"names":[],"mappings":";;;AACA,sDAAmD;AACnD,4DAAyD;AACzD,gDAA6C;AAE7C,SAAgB,WAAW,CAAC,KAAsB;IAChD,MAAM,EAAE,IAAI,EAAE,OAAO,EAAE,GAAG,KAAK,CAAC;IAChC,QAAQ,IAAI,EAAE;QACZ,KAAK,aAAa;YAChB,OAAO,IAAA,yBAAW,EAAC,OAAO,CAAC,CAAC;QAC9B,KAAK,gBAAgB;YACnB,OAAO,IAAA,+BAAc,EAAC,OAAO,CAAC,CAAC;QACjC,KAAK,UAAU;YACb,OAAO,IAAA,mBAAQ,EAAC,OAAO,CAAC,CAAC;QAC3B;YACE,MAAM,KAAK,CAAC,wBAAwB,IAAc,EAAE,CAAC,CAAC;KACzD;AACH,CAAC;AAZD,kCAYC"}

package/lib/apodization/shapes/WindowFunctions.d.ts

@@ -1,5 +1,6 @@
 import type { ExponentialOptions } from './exponential';
 import type { LorentzToGaussOptions } from './lorentzToGauss';
+import { SineBellOptions } from './sineBell';
 interface Exponential {
     kind: 'exponential';
     options: ExponentialOptions;
@@ -8,5 +9,9 @@ interface LorentToGauss {
     kind: 'lorentzToGauss';
     options: LorentzToGaussOptions;
 }
-export type WindowFunctions = Exponential | LorentToGauss;
+interface SineBell {
+    kind: 'sineBell';
+    options: SineBellOptions;
+}
+export type WindowFunctions = Exponential | LorentToGauss | SineBell;
 export {};

package/lib/apodization/shapes/sineBell.d.ts

@@ -0,0 +1,27 @@
+export interface SineBellOptions {
+    /**
+     * Specifies the exponent of the sine-bell; Non-integer values are allowed.
+     * Common values are 1.0 (for ordinary sine-bell) and 2.0 (for squared-bell functions).
+     * @default 1
+     */
+    exponent?: number;
+    /**
+     * Specifies the starting point of the sine-bell in units of pi radians.
+     * Common values are 0.0 (for a sine window which starts height at 0.0) and
+     * 0.5 (for a cosine window, which starts at height 1.0).
+     * @default 0
+     */
+    offset?: number;
+    /**
+     * Specifies the ending point of the sine-bell in units of pi radians.
+     * Common values are 1.0 (for a window which goes to 0.0 height at the last point) and
+     * 0.95 (for a window which doesn't go all the way to 0.0).
+     * @default 1
+     */
+    end?: number;
+    /**
+     * Specifies the number of points in the window function.
+     */
+    length: number;
+}
+export declare function sineBell(options: SineBellOptions): (i: number) => number;

package/lib/apodization/shapes/sineBell.js

@@ -0,0 +1,17 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.sineBell = void 0;
+function sineBell(options) {
+    const { exponent = 1, offset = 0, end = 1, length } = options;
+    if (length === undefined) {
+        throw new Error('length options should exists for sineBell shape');
+    }
+    if (end < 0 || end > 1) {
+        throw new Error(`the end parameter should be [0-1]`);
+    }
+    const c1 = Math.PI * offset;
+    const c2 = (Math.PI * (end - offset)) / (length - 1);
+    return (i) => Math.pow(Math.sin(c1 + c2 * i), exponent);
+}
+exports.sineBell = sineBell;
+//# sourceMappingURL=sineBell.js.map

package/lib/apodization/shapes/sineBell.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"sineBell.js","sourceRoot":"","sources":["../../../src/apodization/shapes/sineBell.ts"],"names":[],"mappings":";;;AA2BA,SAAgB,QAAQ,CAAC,OAAwB;IAC/C,MAAM,EAAE,QAAQ,GAAG,CAAC,EAAE,MAAM,GAAG,CAAC,EAAE,GAAG,GAAG,CAAC,EAAE,MAAM,EAAE,GAAG,OAAO,CAAC;IAE9D,IAAI,MAAM,KAAK,SAAS,EAAE;QACxB,MAAM,IAAI,KAAK,CAAC,iDAAiD,CAAC,CAAC;KACpE;IAED,IAAI,GAAG,GAAG,CAAC,IAAI,GAAG,GAAG,CAAC,EAAE;QACtB,MAAM,IAAI,KAAK,CAAC,mCAAmC,CAAC,CAAC;KACtD;IACD,MAAM,EAAE,GAAG,IAAI,CAAC,EAAE,GAAG,MAAM,CAAC;IAC5B,MAAM,EAAE,GAAG,CAAC,IAAI,CAAC,EAAE,GAAG,CAAC,GAAG,GAAG,MAAM,CAAC,CAAC,GAAG,CAAC,MAAM,GAAG,CAAC,CAAC,CAAC;IACrD,OAAO,CAAC,CAAS,EAAE,EAAE,CAAC,IAAI,CAAC,GAAG,CAAC,IAAI,CAAC,GAAG,CAAC,EAAE,GAAG,EAAE,GAAG,CAAC,CAAC,EAAE,QAAQ,CAAC,CAAC;AAClE,CAAC;AAbD,4BAaC"}

package/lib/apodization/utils/getData.js.map

@@ -1 +1 @@
-{"version":3,"file":"getData.js","sourceRoot":"","sources":["../../../src/apodization/utils/getData.ts"],"names":[],"mappings":";;;AAAA;;GAEG;AACH,SAAgB,OAAO,CAAC,IAA2B,EAAE,MAAc;IACjE,MAAM,IAAI,GAAG,IAAI,YAAY,CAAC,MAAM,CAAC,CAAC;IACtC,IAAI,GAAG,GAAG,MAAM,CAAC,gBAAgB,CAAC;IAClC,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,MAAM,EAAE,CAAC,EAAE,EAAE;QAC/B,MAAM,KAAK,GAAG,IAAI,CAAC,CAAC,CAAC,CAAC;QACtB,IAAI,CAAC,CAAC,CAAC,GAAG,KAAK,CAAC;QAChB,IAAI,KAAK,GAAG,GAAG;YAAE,GAAG,GAAG,KAAK,CAAC;KAC9B;IAED,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,MAAM,EAAE,CAAC,EAAE;QAAE,IAAI,CAAC,CAAC,CAAC,IAAI,GAAG,CAAC;IAChD,OAAO,IAAI,CAAC;AACd,CAAC;AAXD,0BAWC"}
+{"version":3,"file":"getData.js","sourceRoot":"","sources":["../../../src/apodization/utils/getData.ts"],"names":[],"mappings":";;;AAAA;;GAEG;AACH,SAAgB,OAAO,CAAC,IAA2B,EAAE,MAAc;IACjE,MAAM,IAAI,GAAG,IAAI,YAAY,CAAC,MAAM,CAAC,CAAC;IACtC,IAAI,GAAG,GAAG,MAAM,CAAC,gBAAgB,CAAC;IAClC,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,MAAM,EAAE,CAAC,EAAE,EAAE;QAC/B,MAAM,KAAK,GAAG,IAAI,CAAC,CAAC,CAAC,CAAC;QACtB,IAAI,CAAC,CAAC,CAAC,GAAG,KAAK,CAAC;QAChB,IAAI,KAAK,GAAG,GAAG;YAAE,GAAG,GAAG,KAAK,CAAC;KAC9B;IACD,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,MAAM,EAAE,CAAC,EAAE;QAAE,IAAI,CAAC,CAAC,CAAC,IAAI,GAAG,CAAC;IAChD,OAAO,IAAI,CAAC;AACd,CAAC;AAVD,0BAUC"}

package/lib/filters/Data1D.d.ts

@@ -0,0 +1,6 @@
+import { DoubleArray } from 'cheminfo-types';
+export interface Data1D {
+    x: DoubleArray;
+    re: DoubleArray;
+    im: DoubleArray;
+}

package/lib/{xyz/Data2D.js → filters/Data1D.js}

@@ -1,3 +1,3 @@
 "use strict";
 Object.defineProperty(exports, "__esModule", { value: true });
-//# sourceMappingURL=Data2D.js.map
+//# sourceMappingURL=Data1D.js.map

package/lib/filters/Data1D.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"Data1D.js","sourceRoot":"","sources":["../../src/filters/Data1D.ts"],"names":[],"mappings":""}

package/lib/filters/Entry1D.d.ts

@@ -0,0 +1,10 @@
+import { Data1D } from './Data1D';
+import { Filter } from './FiltersManager';
+export interface Entry1D {
+    id?: string;
+    info: Record<string, any>;
+    originalInfo?: Record<string, any>;
+    data: Data1D;
+    originalData?: Data1D;
+    filters: Array<Filter>;
+}

package/lib/filters/Entry1D.js

@@ -0,0 +1,3 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+//# sourceMappingURL=Entry1D.js.map

package/lib/filters/Entry1D.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"Entry1D.js","sourceRoot":"","sources":["../../src/filters/Entry1D.ts"],"names":[],"mappings":""}

package/lib/filters/ExclusionZone.d.ts

@@ -0,0 +1,5 @@
+export interface ExclusionZone {
+    id: string;
+    from: number;
+    to: number;
+}

package/lib/filters/ExclusionZone.js

@@ -0,0 +1,3 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+//# sourceMappingURL=ExclusionZone.js.map

package/lib/filters/ExclusionZone.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"ExclusionZone.js","sourceRoot":"","sources":["../../src/filters/ExclusionZone.ts"],"names":[],"mappings":""}

package/lib/filters/Filters.d.ts

@@ -0,0 +1,7 @@
+export declare const filters: Record<string, {
+    apply: any;
+    reduce: any;
+    isApplicable: any;
+    name: string;
+    id: string;
+}>;

package/lib/filters/Filters.js

@@ -0,0 +1,47 @@
+"use strict";
+var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    var desc = Object.getOwnPropertyDescriptor(m, k);
+    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
+      desc = { enumerable: true, get: function() { return m[k]; } };
+    }
+    Object.defineProperty(o, k2, desc);
+}) : (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    o[k2] = m[k];
+}));
+var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
+    Object.defineProperty(o, "default", { enumerable: true, value: v });
+}) : function(o, v) {
+    o["default"] = v;
+});
+var __importStar = (this && this.__importStar) || function (mod) {
+    if (mod && mod.__esModule) return mod;
+    var result = {};
+    if (mod != null) for (var k in mod) if (k !== "default" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
+    __setModuleDefault(result, mod);
+    return result;
+};
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.filters = void 0;
+const apodization = __importStar(require("./filter1d/apodization"));
+const baselineCorrection = __importStar(require("./filter1d/baselineCorrection"));
+const digitalFilter = __importStar(require("./filter1d/digitalFilter"));
+const fft = __importStar(require("./filter1d/fft"));
+const phaseCorrection = __importStar(require("./filter1d/phaseCorrection"));
+const shiftX = __importStar(require("./filter1d/shiftX"));
+const zeroFilling = __importStar(require("./filter1d/zeroFilling"));
+const shift2DX = __importStar(require("./filter2d/shiftX"));
+const shift2DY = __importStar(require("./filter2d/shiftY"));
+exports.filters = {
+    apodization,
+    baselineCorrection,
+    digitalFilter,
+    fft,
+    phaseCorrection,
+    shiftX,
+    zeroFilling,
+    shift2DX,
+    shift2DY,
+};
+//# sourceMappingURL=Filters.js.map

package/lib/filters/Filters.js.map

@@ -0,0 +1 @@
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package/lib/filters/FiltersManager.d.ts

@@ -0,0 +1,23 @@
+import { Entry2D } from '../xyz/Entry2D';
+import { Entry1D } from './Entry1D';
+export interface Filter {
+    id: string;
+    name: string;
+    label: string;
+    isDeleteAllow: boolean;
+    flag: boolean | null;
+    value: any;
+    error?: any;
+}
+export interface FilterDomainUpdateRules {
+    updateYDomain: boolean;
+    updateXDomain: boolean;
+}
+/***
+ * @param {object} Filters [{name:'',options:{}},{...}]
+ */
+declare function applyFilter(datum: Entry1D | Entry2D, filters?: any[], forceReapply?: boolean): void;
+declare function reapplyFilters(datum: Entry1D | Entry2D, filters?: any): void;
+declare function enableFilter(datum: Entry1D | Entry2D, id: string | null, checked: boolean | null, filters?: null): void;
+declare function addFilter(datum: Entry1D | Entry2D, filter: any, isDeleteAllow?: boolean): void;
+export { applyFilter, reapplyFilters, enableFilter, addFilter };

package/lib/filters/FiltersManager.js

@@ -0,0 +1,130 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.addFilter = exports.enableFilter = exports.reapplyFilters = exports.applyFilter = void 0;
+const uuid_1 = require("@lukeed/uuid");
+const cloneData1D_1 = require("../utilities/cloneData1D");
+const cloneData2D_1 = require("../utilities/cloneData2D");
+const Filters_1 = require("./Filters");
+function resetDataToOrigin(datum) {
+    datum.data =
+        datum.info.dimension === 1
+            ? (0, cloneData1D_1.cloneData1D)(datum.originalData)
+            : (0, cloneData2D_1.cloneData2D)(datum.originalData);
+    datum.info = { ...datum.originalInfo };
+}
+/***
+ * @param {object} Filters [{name:'',options:{}},{...}]
+ */
+function applyFilter(datum, filters = [], forceReapply = false) {
+    let isReduced = false;
+    for (let filter of filters) {
+        const filterOption = {
+            name: filter.name,
+            label: Filters_1.filters[filter.name].name,
+            value: filter.options,
+        };
+        const previousFilter = lookupForFilter(datum, filter.name);
+        if (previousFilter) {
+            const reduceResult = Filters_1.filters[filter.name].reduce(previousFilter.value, filterOption.value);
+            if (reduceResult.once) {
+                if (!isReduced) {
+                    isReduced = true;
+                }
+                if (reduceResult.reduce != null && reduceResult.reduce !== undefined) {
+                    replaceFilter(datum, previousFilter.id, reduceResult.reduce);
+                }
+            }
+            else {
+                addFilter(datum, filterOption, Object.prototype.hasOwnProperty.call(filter, 'isDeleteAllow')
+                    ? filter.isDeleteAllow
+                    : true);
+            }
+        }
+        else {
+            addFilter(datum, filterOption, Object.prototype.hasOwnProperty.call(filter, 'isDeleteAllow')
+                ? filter.isDeleteAllow
+                : true);
+        }
+    }
+    if (forceReapply) {
+        reapplyFilters(datum);
+    }
+    else if (isReduced) {
+        if (filters.length === 1 && isLastFilter(datum, filters[0].name)) {
+            Filters_1.filters[filters[0].name].apply(datum, filters[0].options);
+        }
+        else {
+            reapplyFilters(datum);
+        }
+    }
+    else {
+        for (let filter of filters) {
+            Filters_1.filters[filter.name].apply(datum, filter.options);
+        }
+    }
+}
+exports.applyFilter = applyFilter;
+function isLastFilter(datum, id) {
+    const index = datum.filters.findIndex((f) => f.name === id);
+    if (datum.filters.length === index + 1) {
+        return true;
+    }
+    return false;
+}
+function lookupForFilter(datum, filterName) {
+    return datum.filters.find((f) => f.name === filterName);
+}
+function reapplyFilters(datum, filters = null) {
+    const _filters = filters || datum.filters;
+    enableFilter(datum, null, null, _filters);
+}
+exports.reapplyFilters = reapplyFilters;
+// id filter id
+function enableFilter(datum, id, checked, filters = null) {
+    datum.filters = datum.filters.slice(0);
+    if (id) {
+        datum.filters = datum.filters.map((filter) => {
+            return { ...filter, flag: filter.id === id ? checked : filter.flag };
+        });
+    }
+    resetDataToOrigin(datum);
+    const _filters = filters || datum.filters;
+    for (let filterIndex = 0; filterIndex < _filters.length; filterIndex++) {
+        const filter = datum.filters[filterIndex];
+        datum.filters[filterIndex] = {
+            ...datum.filters[filterIndex],
+        };
+        if (filter.flag) {
+            try {
+                Filters_1.filters[filter.name].apply(datum, filter.value);
+            }
+            catch (error) {
+                datum.filters[filterIndex] = {
+                    ...datum.filters[filterIndex],
+                    error: error.message,
+                };
+            }
+        }
+    }
+}
+exports.enableFilter = enableFilter;
+function addFilter(datum, filter, isDeleteAllow = true) {
+    const id = (0, uuid_1.v4)();
+    datum.filters = datum.filters.slice(0);
+    datum.filters.push({
+        ...filter,
+        id,
+        flag: true,
+        isDeleteAllow,
+    });
+}
+exports.addFilter = addFilter;
+function replaceFilter(datum, filterID, value) {
+    // datum.filters = datum.filters.slice(0);
+    const index = datum.filters.findIndex((f) => f.id === filterID);
+    datum.filters[index] = {
+        ...datum.filters[index],
+        value,
+    };
+}
+//# sourceMappingURL=FiltersManager.js.map

package/lib/filters/FiltersManager.js.map

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package/lib/filters/MatrixFilter.d.ts

@@ -0,0 +1,39 @@
+import type { FilterXYType } from 'ml-signal-processing';
+interface BaseField {
+    key: string;
+    level: number;
+    name: string;
+    description: string;
+}
+interface Field<T> extends BaseField {
+    default: T;
+}
+interface LabelField extends BaseField {
+    type: 'label';
+}
+interface SelectField extends Field<any> {
+    type: 'select';
+    choices: any[];
+}
+interface StringField extends Field<string> {
+    type: 'string';
+}
+interface NumberField extends Field<number> {
+    type: 'number';
+}
+interface BooleanField extends Field<boolean> {
+    type: 'boolean';
+}
+type CommonField = SelectField | StringField | NumberField | BooleanField | LabelField;
+interface ListField extends Field<string[]> {
+    type: 'list';
+    properties: Record<string, CommonField>;
+}
+type Properties = ListField | SelectField | StringField | NumberField | BooleanField | LabelField;
+export type MatrixProperties = Record<string, Properties>;
+export interface MatrixFilter {
+    name: FilterXYType['name'];
+    properties: MatrixProperties;
+    options: any;
+}
+export {};

package/lib/filters/MatrixFilter.js

@@ -0,0 +1,3 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+//# sourceMappingURL=MatrixFilter.js.map

package/lib/filters/MatrixFilter.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"MatrixFilter.js","sourceRoot":"","sources":["../../src/filters/MatrixFilter.ts"],"names":[],"mappings":""}

package/lib/filters/MatrixOptions.d.ts

@@ -0,0 +1,28 @@
+import { MatrixFilter } from './MatrixFilter';
+import { ExclusionZone } from './ExclusionZone';
+export interface MatrixOptions {
+    /**
+     * Matrix generation filters
+     * @default []
+     *
+     */
+    filters: (MatrixFilter & {
+        options: object;
+    })[];
+    /**
+     * Exclusion zones
+     * @default []
+     */
+    exclusionsZones: ExclusionZone[];
+    /**
+     * range
+     */
+    range: {
+        from: number;
+        to: number;
+    };
+    /**
+     * number of points
+     */
+    numberOfPoints: number;
+}

package/lib/filters/MatrixOptions.js

@@ -0,0 +1,3 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+//# sourceMappingURL=MatrixOptions.js.map

package/lib/filters/MatrixOptions.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"MatrixOptions.js","sourceRoot":"","sources":["../../src/filters/MatrixOptions.ts"],"names":[],"mappings":""}

package/lib/filters/filter1d/apodization.d.ts

@@ -0,0 +1,26 @@
+import { Entry1D } from '../Entry1D';
+import { FilterDomainUpdateRules } from '../FiltersManager';
+export declare const id = "apodization";
+export declare const name = "Apodization";
+export declare const DOMAIN_UPDATE_RULES: Readonly<FilterDomainUpdateRules>;
+export interface ApodizationOptions {
+    lineBroadening: number;
+    gaussBroadening: number;
+    lineBroadeningCenter: number;
+}
+export declare const defaultApodizationOptions: ApodizationOptions;
+export declare function apply(datum1D: Entry1D, options: ApodizationOptions): void;
+export declare function isApplicable(datum1D: Entry1D): boolean;
+export declare function reduce(previousValue: any, newValue: any): {
+    once: boolean;
+    reduce: any;
+};
+export declare function apodizationFilter(datum1D: Entry1D, options: ApodizationOptions): {
+    windowData: never[];
+    re: import("cheminfo-types").DoubleArray;
+    im: import("cheminfo-types").DoubleArray;
+} | {
+    re: import("cheminfo-types").DoubleArray;
+    im: import("cheminfo-types").DoubleArray;
+    windowData: Float64Array;
+};

package/lib/filters/filter1d/apodization.js

@@ -0,0 +1,77 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.apodizationFilter = exports.reduce = exports.isApplicable = exports.apply = exports.defaultApodizationOptions = exports.DOMAIN_UPDATE_RULES = exports.name = exports.id = void 0;
+const apodization_1 = require("../../apodization/apodization");
+exports.id = 'apodization';
+exports.name = 'Apodization';
+exports.DOMAIN_UPDATE_RULES = {
+    updateXDomain: true,
+    updateYDomain: false,
+};
+exports.defaultApodizationOptions = {
+    lineBroadening: 1,
+    gaussBroadening: 0,
+    lineBroadeningCenter: 0,
+};
+function apply(datum1D, options) {
+    const newData = apodizationFilter(datum1D, options);
+    datum1D.data = {
+        ...datum1D.data,
+        re: newData.re,
+        im: newData.im,
+    };
+}
+exports.apply = apply;
+function isApplicable(datum1D) {
+    if (datum1D.info.isComplex && datum1D.info.isFid)
+        return true;
+    return false;
+}
+exports.isApplicable = isApplicable;
+function reduce(previousValue, newValue) {
+    return {
+        once: true,
+        reduce: newValue,
+    };
+}
+exports.reduce = reduce;
+function apodizationFilter(datum1D, options) {
+    var _a;
+    const { lineBroadening, gaussBroadening, lineBroadeningCenter } = options;
+    let grpdly = ((_a = datum1D.info) === null || _a === void 0 ? void 0 : _a.digitalFilter) || 0;
+    let pointsToShift;
+    if (grpdly > 0) {
+        pointsToShift = Math.floor(grpdly);
+    }
+    else {
+        pointsToShift = 0;
+    }
+    const re = datum1D.data.re;
+    const im = datum1D.data.im;
+    const t = datum1D.data.x;
+    const length = re.length;
+    const dw = (t[length - 1] - t[0]) / (length - 1); //REPLACE CONSTANT with calculated value... : for this we need AQ or DW to set it right...
+    return (0, apodization_1.apodization)({ re, im }, {
+        pointsToShift,
+        compose: {
+            length,
+            shapes: [
+                {
+                    start: 0,
+                    shape: {
+                        kind: 'lorentzToGauss',
+                        options: {
+                            length,
+                            dw,
+                            exponentialHz: gaussBroadening > 0 ? lineBroadening : -lineBroadening,
+                            gaussianHz: gaussBroadening,
+                            center: lineBroadeningCenter,
+                        },
+                    },
+                },
+            ],
+        },
+    });
+}
+exports.apodizationFilter = apodizationFilter;
+//# sourceMappingURL=apodization.js.map

package/lib/filters/filter1d/apodization.js.map

@@ -0,0 +1 @@
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