nlm-memory 0.20.0 → 0.21.0

package/README.md

@@ -11,9 +11,9 @@
   <a href="https://github.com/pbmagnet4/nlm-memory/actions/workflows/ci.yml"><img src="https://github.com/pbmagnet4/nlm-memory/actions/workflows/ci.yml/badge.svg?branch=main" alt="CI status" /></a>
   <a href="https://github.com/pbmagnet4/nlm-memory/blob/main/LICENSE"><img src="https://img.shields.io/github/license/pbmagnet4/nlm-memory?color=blue" alt="License: Apache 2.0" /></a>
   <a href="https://nodejs.org"><img src="https://img.shields.io/node/v/nlm-memory?color=brightgreen" alt="Node 20+" /></a>
-  <img src="https://img.shields.io/badge/tests-726%20passing-success" alt="726 tests passing" />
+  <img src="https://img.shields.io/badge/tests-1%2C700%2B%20passing-success" alt="1,700+ tests passing" />
   <img src="https://img.shields.io/badge/MCP-9%20runtimes-8A2BE2" alt="MCP across 9 runtimes" />
-  <img src="https://img.shields.io/badge/hooks-3%20runtimes-7B2CBF" alt="Hooks on 3 runtimes" />
+  <img src="https://img.shields.io/badge/hooks-4%20runtimes-7B2CBF" alt="Hooks on 4 runtimes" />
   <img src="https://img.shields.io/badge/telemetry-none-informational" alt="Zero telemetry" />
 </p>
 
@@ -33,11 +33,13 @@
 
 ---
 
-`nlm-memory` is a local-first memory layer for AI coding agents. It indexes every session from Claude Code, Codex, OpenCode, Cursor, Windsurf, Hermes, Aider, and pi into a single searchable store on your machine. Three properties no other memory layer ships together:
+`nlm-memory` is a local-first memory layer for AI coding agents. It indexes every session from Claude Code, Codex CLI, OpenCode, Cursor, Windsurf, Hermes WebUI, Hermes Agent, Aider, and pi across nine runtimes into a single searchable store on your machine. Three properties no other memory layer ships together:
 
 1. **Cross-runtime reach.** One index, every adapter.
 2. **Editable timeline.** Sessions can be superseded by newer ones; entities can be retired. Patch history retroactively — no other tool lets you do this. See [docs/supersedence.md](docs/supersedence.md).
-3. **97.2% R@5 baseline.** On a 14-month corpus, keyword recall surfaces the right session in the top 5 on 97.2% of evaluator queries. No fine-tuning. The labels were generated by DeepSeek V4 — the retrieval algorithm is the same code path you'll run, but expect a lower number with a smaller local classifier. See [docs/methodology-recall-baseline.md](docs/methodology-recall-baseline.md).
+3. **Strong R@5 baselines.** Two measurements, both committed: **97.2% R@5** on the public LongMemEval-S benchmark (hybrid mode, n=500, body-only, reproducible by anyone) and **90.0% R@5** on a real 14-month personal corpus (n=40 curated decision queries, keyword mode, 36/40 retrieved). No fine-tuning. The corpus labels were generated by DeepSeek V4; expect a lower number with a smaller local classifier. See [docs/benchmarks.md](docs/benchmarks.md) and [docs/methodology-recall-baseline.md](docs/methodology-recall-baseline.md).
+
+**Install-and-recovery validation.** A context-free agent ("the stranger") with no knowledge of NLM internals installed from HEAD and answered "Why pgvector over Qdrant, and was anything reconsidered?" correctly in under 6 minutes, recovering the full decision arc including a superseded session. See [reports/stranger-sim/2026-06-10-recovery-simulation.md](reports/stranger-sim/2026-06-10-recovery-simulation.md).
 
 Everything stays on your machine by default. No telemetry, no account. The classifier defaults to local (Ollama); if you opt into a cloud classifier (DeepSeek, OpenAI, Anthropic, OpenRouter, or any OpenAI-compatible endpoint), session transcripts are sent to that provider — see [Security](#security) for the exact data-flow.
 
@@ -100,13 +102,15 @@ Two delivery paths. They share the same index.
 
 ### 1. Hooks — automatic context injection
 
-Hooks fire on user input and prepend a pointer block of likely-relevant prior sessions to the model's context. Four runtimes ship hooks today: Claude Code (six-hook lifecycle), Codex CLI (UserPromptSubmit + Stop via the marketplace plugin), Hermes Agent (six parallel hooks), and pi.dev (one `input` hook via [nlm/](nlm/README.md)). Cursor, Windsurf, and OpenCode don't expose a pre-prompt hook today, so the `--with-rules` install path drops a static rules snippet that asks the agent to call `recall_sessions` itself on history-flavored prompts (see [docs/hooks.md](docs/hooks.md) for the snippet). Full lifecycle, modes, logging surface, and the daily liveness canary documented in [docs/hooks.md](docs/hooks.md).
+Hooks deliver memory into agent context. Four runtimes ship hooks today: Claude Code (six-hook lifecycle), Codex CLI (UserPromptSubmit + Stop via the marketplace plugin), Hermes Agent (six parallel hooks), and pi.dev (one `input` hook via [nlm/](nlm/README.md)). Cursor, Windsurf, and OpenCode don't expose a pre-prompt hook today, so the `--with-rules` install path drops a static rules snippet that asks the agent to call `recall_sessions` itself on history-flavored prompts (see [docs/hooks.md](docs/hooks.md) for the snippet). Full lifecycle, modes, logging surface, and the daily liveness canary documented in [docs/hooks.md](docs/hooks.md).
+
+On fresh installs, the **SessionStart** hook injects the pointer block at conversation open. The **UserPromptSubmit** (per-prompt) lane is off by default: measured pulls are 72.4% useful vs 18.2% ambient on the same judge (see [reports/usefulness/2026-07-03-consumption-measurements.md](reports/usefulness/2026-07-03-consumption-measurements.md)), so pull-first via the recall MCP tools is the recommended posture. Set `NLM_HOOK_PROMPT_RECALL=on` to re-enable per-prompt injection.
 
 **Claude Code** — six hooks written to `~/.claude/settings.json` via `nlm connect claude-code`:
 
 | Event | What NLM does | Mode |
 |---|---|---|
-| **UserPromptSubmit** | Score the prompt, silently prepend pointer block listing 0–3 most likely-relevant prior sessions | live by default |
+| **UserPromptSubmit** | Score the prompt, silently prepend pointer block listing 0–3 most likely-relevant prior sessions | off by default (pull-first); set `NLM_HOOK_PROMPT_RECALL=on` to enable |
 | **SessionStart** | Cold-start agents (cron, background) hit this; same pointer-block delivery without a user prompt, plus a "Known failure modes for this repo" block when signals data exists (see Signals below) | live by default |
 | **SessionEnd** | Delete the per-conversation memo on session close so state files don't accumulate | always on |
 | **Stop** | Scan the model's response for citations of surfaced session IDs → updates `useful_hit_rate` and builds the reranker training substrate | always on |
@@ -335,6 +339,9 @@ recall: prompt / query
 | `NLM_PORT` | `3940` | Daemon bind port (loopback only) |
 | `NLM_DB_PATH` | `~/.nlm/canonical.sqlite` | SQLite canonical store location |
 | `NLM_HOOK_MODE` | `live` | `live` injects pointer block; `shadow` logs without injecting |
+| `NLM_HOOK_RECALL_TIMEOUT_MS` | `4000` | Hook-side budget for the daemon recall call. Must stay below `NLM_HOOK_DEADLINE_MS` and above the daemon's embed deadline or the pointer block silently empties (#396). |
+| `NLM_HOOK_DEADLINE_MS` | `6000` | Outer wall-clock deadline for the recall + gate stages of a hook fire. Fail-open on expiry. |
+| `NLM_HOOK_PROMPT_RECALL` | `(unset = off)` | Per-prompt ambient recall. Off by default (pull-first); set `on` to inject a pointer block on every prompt. `off` disables explicitly. |
 | `NLM_HOOK_LOG` | `~/.nlm/hook-log.jsonl` | Hook fire log; powers digest's liveness alert |
 | `NLM_USEFUL_HIT_LOG` | `~/.nlm/useful-hit-log.jsonl` | Citation/useful-hit ledger |
 | `NLM_QUERY_LOG` | `~/.nlm/query-log.jsonl` | Recall query telemetry |
@@ -344,7 +351,7 @@ recall: prompt / query
 | `NLM_MCP_TOKEN` | auto-generated | 256-bit bearer for `/api/*` (non-browser) and `/mcp` |
 | `NLM_MCP_CONFIG` | `~/.mcp.json` | Path the `connect`/`disconnect` commands modify |
 | `NLM_CLASSIFIER` | `ollama` | `ollama` (local, default), `deepseek`, `openai`, `anthropic`, `openrouter`, or `openai-compatible` |
-| `NLM_CLASSIFIER_MODEL` | `qwen3.5:4b` | Model id for the chosen provider. `qwen3.5:4b` (Q4_K_M, 4.7B) is the recommended local default — scored 74.4% decision-precision vs 58.7% for `qwen3:4b-instruct-2507-q4_K_M` (task #320, 2026-06-12). |
+| `NLM_CLASSIFIER_MODEL` | `qwen3.5:4b` | Model id for the chosen provider. `qwen3.5:4b` (Q4_K_M, 4.7B) is the recommended local default. For measured tier expectations, see [docs/classifier-tiers.md](docs/classifier-tiers.md). |
 | `NLM_OLLAMA_URL` | `http://localhost:11434` | Override Ollama endpoint |
 | `NLM_CODE_EXEMPLARS_ENABLED` | — | Set to `1` to enable the code-exemplar lane (capture from code-bearing signals + the `recall_code` tool/routes). Off by default. |
 | `NLM_CODE_EMBED_MODEL` | `hf.co/awhiteside/CodeRankEmbed-Q8_0-GGUF` | Ollama model for code-exemplar embeddings (768-dim). Only used when the exemplar lane is enabled. |
@@ -454,7 +461,7 @@ Old installs have `NLM_HOOK_MODE=shadow` hardcoded in `~/.claude/settings.json`
 | **Unit of memory** | Whole session + extracted markers | Atomic facts | Graph nodes + edges | Static file |
 | **Cross-runtime** | 9 adapters, one corpus | Per-app SDK integration | Per-app SDK integration | Per-runtime config |
 | **Editable timeline** | Sessions can be superseded, retired, aborted | Append-only fact log | Graph edits | Manual file edits |
-| **R@5 baseline** | 97.2% on 14mo corpus | published varies | published varies | n/a |
+| **R@5 baseline** | 97.2% public benchmark; 90.0% real 14mo corpus ([docs/benchmarks.md](docs/benchmarks.md)) | published varies | published varies | n/a |
 | **External deps** | SQLite + Ollama (local) | Postgres or Qdrant | Postgres | none |
 | **Hosted offering** | none — local only | yes | yes | n/a |
 | **Account required** | none | yes (cloud tier) | yes | none |
@@ -469,7 +476,9 @@ The defining property is the editable timeline. mem0 and Letta append; NLM lets
 
 - [docs/supersedence.md](docs/supersedence.md) — the editable timeline: statuses, what gets recorded when, how supersedence flows through recall
 - [docs/hooks.md](docs/hooks.md) — full hook lifecycle, modes, selection logic, pointer-block format, logging surface, daily liveness canary
-- [docs/methodology-recall-baseline.md](docs/methodology-recall-baseline.md) — how R@5 = 97.2% is measured + how to run LongMemEval-S on your own machine
+- [docs/corpus-retention.md](docs/corpus-retention.md) - corpus monitor, size thresholds, and the entity dedup runbook
+- [docs/benchmarks.md](docs/benchmarks.md) - all three measurement dimensions: retrieval quality (LongMemEval-S + personal corpus), classifier quality, and consumption quality
+- [docs/methodology-recall-baseline.md](docs/methodology-recall-baseline.md) — how both R@5 baselines are measured and how to run LongMemEval-S on your own machine
 - [SECURITY.md](SECURITY.md) — threat model + responsible disclosure
 
 ---
@@ -483,7 +492,7 @@ npm install
 npm run build          # compile dist/ — commit the result, it ships in the repo
 npm run dev            # hot-reload daemon
 npm run ui:dev         # hot-reload UI at localhost:5173 (proxies /api to :3940)
-npm test               # 726 tests across 73 files
+npm test               # 1,700+ tests across 245 files
 npm run typecheck
 node dist/cli/nlm.js doctor    # pre-publish: verify DB invariants (exit 1 on violations)
 ```

package/dist/cli/digest.js

@@ -10,9 +10,40 @@
 import { existsSync, readFileSync } from "node:fs";
 import { homedir } from "node:os";
 import { join } from "node:path";
+import Database from "better-sqlite3";
 import { composeDigest, } from "../core/digest/compose.js";
+import { computePrecision } from "../core/recall/precision.js";
+import { readHookRecallLog } from "../core/recall/hook-recall-log.js";
+import { readCitationLog } from "../core/recall/citation-log.js";
 import { checkHookLiveness } from "../core/digest/hook-liveness.js";
+import { checkHookInjection } from "../core/digest/hook-injection.js";
 import { hookAuthHeaders } from "../hook/hook-auth.js";
+import { computeOutcomeCoverage } from "../core/outcome/coverage.js";
+import { loadOutcomeCoverageInput } from "../core/storage/sqlite-outcome-store.js";
+/** Sessions ended in the last N days count toward the Tier-B coverage block. */
+const OUTCOME_COVERAGE_WINDOW_DAYS = 30;
+function defaultDbPath() {
+    return process.env["NLM_DB_PATH"] ?? join(homedir(), ".nlm", "canonical.sqlite");
+}
+/**
+ * Best-effort, read-only: opens its own SQLite connection directly rather
+ * than round-tripping the daemon (same pattern as the hook-log/citation-log
+ * reads below). A failure here must not break the rest of the digest.
+ */
+async function loadOutcomeCoverage() {
+    const dbPath = defaultDbPath();
+    if (!existsSync(dbPath))
+        return null;
+    const db = new Database(dbPath, { readonly: true });
+    try {
+        const sinceIso = new Date(Date.now() - OUTCOME_COVERAGE_WINDOW_DAYS * 24 * 60 * 60 * 1000).toISOString();
+        const input = await loadOutcomeCoverageInput(db, { sinceIso });
+        return await computeOutcomeCoverage(input);
+    }
+    finally {
+        db.close();
+    }
+}
 export async function runDigest(opts) {
     const base = `http://localhost:${opts.port}`;
     const timeoutMs = opts.timeoutMs ?? 8000;
@@ -46,17 +77,45 @@ export async function runDigest(opts) {
     const hookLogPath = process.env["NLM_HOOK_LOG"] ?? join(homedir(), ".nlm", "hook-log.jsonl");
     const hookLogExists = existsSync(hookLogPath);
     const hookLog = hookLogExists ? readHookLog(hookLogPath) : [];
-    const hookAlert = checkHookLiveness({
+    const livenessAlert = checkHookLiveness({
         sessions,
         hookLog,
         hookLogPath,
         hookLogExists,
     });
+    const injectionResult = checkHookInjection(hookLog);
+    const hookAlert = [livenessAlert, injectionResult.message].filter(Boolean).join("\n") || null;
+    // True cited-precision over the 7-day window (the honest "was recall useful"
+    // metric). Best-effort: a log-read failure must not break the digest.
+    let precision = null;
+    try {
+        const [recallEntries, citationEntries] = await Promise.all([
+            readHookRecallLog(7),
+            readCitationLog(7),
+        ]);
+        const result = computePrecision(recallEntries, citationEntries);
+        precision = {
+            precisionAtK: result.precisionAtK,
+            conversationCount: result.conversationCount,
+        };
+    }
+    catch {
+        precision = null;
+    }
+    let outcomeCoverage = null;
+    try {
+        outcomeCoverage = await loadOutcomeCoverage();
+    }
+    catch {
+        outcomeCoverage = null;
+    }
     const text = composeDigest({
         stats,
         recent,
         port: opts.port,
         hookAlert,
+        precision,
+        outcomeCoverage,
     });
     if (opts.telegram) {
         await postTelegram(text);

package/dist/cli/digest.js.map

@@ -1 +1 @@
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package/dist/cli/init.d.ts

@@ -0,0 +1,12 @@
+export declare const PACKAGE_TEMPLATES_DIR: string;
+export declare const VALID_AGENTS: readonly ["claude-code", "generic"];
+export type AgentName = (typeof VALID_AGENTS)[number];
+export interface InitCommandDeps {
+    readonly agent: string;
+    readonly write?: string | undefined;
+    readonly force?: boolean | undefined;
+    readonly stdout: (s: string) => void;
+    readonly stderr: (s: string) => void;
+    readonly templatesDir?: string | undefined;
+}
+export declare function runInitCommand(deps: InitCommandDeps): void;

package/dist/cli/init.js

@@ -0,0 +1,49 @@
+import { readFileSync, writeFileSync, existsSync } from "node:fs";
+import { resolve, dirname } from "node:path";
+import { fileURLToPath } from "node:url";
+const __filename = fileURLToPath(import.meta.url);
+const __dirname = dirname(__filename);
+export const PACKAGE_TEMPLATES_DIR = resolve(__dirname, "../../templates");
+const MARKER_BEGIN = "<!-- nlm-agent-contract:begin -->";
+const MARKER_END = "<!-- nlm-agent-contract:end -->";
+export const VALID_AGENTS = ["claude-code", "generic"];
+export function runInitCommand(deps) {
+    const { agent, write, force, stdout, stderr } = deps;
+    const templatesDir = deps.templatesDir ?? PACKAGE_TEMPLATES_DIR;
+    if (!VALID_AGENTS.includes(agent)) {
+        stderr(`nlm init: unknown agent "${agent}". Valid values: ${VALID_AGENTS.join(", ")}\n`);
+        process.exitCode = 1;
+        return;
+    }
+    const content = readFileSync(resolve(templatesDir, "agent-contract", `${agent}.md`), "utf8");
+    if (!write) {
+        stdout(content);
+        return;
+    }
+    const existing = existsSync(write) ? readFileSync(write, "utf8") : "";
+    if (existing.includes(MARKER_BEGIN)) {
+        if (!force) {
+            stderr(`nlm init: ${write} already contains the nlm-agent-contract block.\n` +
+                `Re-run with --force to replace it in place.\n`);
+            process.exitCode = 1;
+            return;
+        }
+        const beginIdx = existing.indexOf(MARKER_BEGIN);
+        const endIdx = existing.indexOf(MARKER_END);
+        if (endIdx === -1 || endIdx < beginIdx) {
+            stderr(`nlm init: begin marker found but end marker is missing in ${write}. ` +
+                `Remove the markers manually and re-run.\n`);
+            process.exitCode = 1;
+            return;
+        }
+        const before = existing.slice(0, beginIdx);
+        const after = existing.slice(endIdx + MARKER_END.length);
+        writeFileSync(write, `${before}${MARKER_BEGIN}\n${content}\n${MARKER_END}${after}`, "utf8");
+        stderr(`nlm init: replaced nlm-agent-contract block in ${write}\n`);
+        return;
+    }
+    const separator = existing.length > 0 && !existing.endsWith("\n") ? "\n" : "";
+    writeFileSync(write, `${existing}${separator}\n${MARKER_BEGIN}\n${content}\n${MARKER_END}\n`, "utf8");
+    stderr(`nlm init: appended nlm-agent-contract block to ${write}\n`);
+}
+//# sourceMappingURL=init.js.map

package/dist/cli/init.js.map

@@ -0,0 +1 @@
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package/dist/cli/nlm.d.ts

@@ -22,5 +22,17 @@
  *   nlm disconnect claude-code — remove MCP block from ~/.mcp.json
  *   nlm disconnect codex       — remove Codex plugin
  *   nlm digest   — print a daily-activity digest (or --telegram to post)
+ *   nlm init     - print (or write) the agent recall contract snippet
  */
-export {};
+export declare function resolveDigestDate(date: string | undefined): string;
+export declare function shouldAppendTrend(lastLineTs: string | null, now: number): boolean;
+export interface ClassifierEvalDeps {
+    readonly classify: (transcript: string) => Promise<import("../ports/llm-client.js").ClassifyResult>;
+    readonly provider: string;
+    readonly model: string;
+    readonly fixturesDir: string;
+    readonly limit?: number;
+    readonly json: boolean;
+    readonly stdout: (s: string) => void;
+}
+export declare function runClassifierEvalCommand(deps: ClassifierEvalDeps): Promise<void>;