molstar 4.1.0 → 4.2.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (479) hide show
  1. package/build/viewer/molstar.js +1 -1
  2. package/lib/apps/mesoscale-explorer/data/cellpack/preset.d.ts +1 -1
  3. package/lib/apps/mesoscale-explorer/data/cellpack/preset.js +5 -5
  4. package/lib/apps/mesoscale-explorer/data/generic/preset.d.ts +1 -1
  5. package/lib/apps/mesoscale-explorer/data/generic/preset.js +3 -3
  6. package/lib/apps/mesoscale-explorer/data/mmcif/preset.d.ts +1 -1
  7. package/lib/apps/mesoscale-explorer/data/mmcif/preset.js +3 -3
  8. package/lib/apps/mesoscale-explorer/data/petworld/preset.d.ts +1 -1
  9. package/lib/apps/mesoscale-explorer/data/petworld/preset.js +3 -3
  10. package/lib/apps/mesoscale-explorer/data/state.d.ts +10 -1
  11. package/lib/apps/mesoscale-explorer/data/state.js +14 -2
  12. package/lib/apps/mesoscale-explorer/ui/entities.d.ts +7 -1
  13. package/lib/apps/mesoscale-explorer/ui/entities.js +23 -4
  14. package/lib/apps/viewer/app.d.ts +8 -2
  15. package/lib/apps/viewer/app.js +6 -6
  16. package/lib/cli/cifschema/util/cif-dic.js +1 -0
  17. package/lib/commonjs/apps/mesoscale-explorer/data/cellpack/preset.d.ts +1 -1
  18. package/lib/commonjs/apps/mesoscale-explorer/data/cellpack/preset.js +5 -5
  19. package/lib/commonjs/apps/mesoscale-explorer/data/generic/preset.d.ts +1 -1
  20. package/lib/commonjs/apps/mesoscale-explorer/data/generic/preset.js +3 -3
  21. package/lib/commonjs/apps/mesoscale-explorer/data/mmcif/preset.d.ts +1 -1
  22. package/lib/commonjs/apps/mesoscale-explorer/data/mmcif/preset.js +3 -3
  23. package/lib/commonjs/apps/mesoscale-explorer/data/petworld/preset.d.ts +1 -1
  24. package/lib/commonjs/apps/mesoscale-explorer/data/petworld/preset.js +3 -3
  25. package/lib/commonjs/apps/mesoscale-explorer/data/state.d.ts +10 -1
  26. package/lib/commonjs/apps/mesoscale-explorer/data/state.js +15 -3
  27. package/lib/commonjs/apps/mesoscale-explorer/ui/entities.d.ts +7 -1
  28. package/lib/commonjs/apps/mesoscale-explorer/ui/entities.js +22 -3
  29. package/lib/commonjs/apps/viewer/app.d.ts +8 -2
  30. package/lib/commonjs/apps/viewer/app.js +6 -6
  31. package/lib/commonjs/cli/cifschema/util/cif-dic.js +1 -0
  32. package/lib/commonjs/extensions/anvil/behavior.d.ts +1 -0
  33. package/lib/commonjs/extensions/anvil/representation.d.ts +5 -0
  34. package/lib/commonjs/extensions/assembly-symmetry/behavior.d.ts +1 -0
  35. package/lib/commonjs/extensions/assembly-symmetry/representation.d.ts +1 -0
  36. package/lib/commonjs/extensions/dnatco/confal-pyramids/representation.d.ts +3 -0
  37. package/lib/commonjs/extensions/dnatco/ntc-tube/representation.d.ts +3 -0
  38. package/lib/commonjs/extensions/geo-export/glb-exporter.d.ts +1 -1
  39. package/lib/commonjs/extensions/geo-export/glb-exporter.js +6 -4
  40. package/lib/commonjs/extensions/mvs/camera.d.ts +2 -0
  41. package/lib/commonjs/extensions/mvs/camera.js +29 -2
  42. package/lib/commonjs/extensions/mvs/components/annotation-label/representation.d.ts +2 -0
  43. package/lib/commonjs/extensions/mvs/components/annotation-label/visual.d.ts +1 -0
  44. package/lib/commonjs/extensions/mvs/components/custom-label/representation.d.ts +2 -0
  45. package/lib/commonjs/extensions/mvs/components/custom-label/visual.d.ts +1 -0
  46. package/lib/commonjs/extensions/mvs/components/formats.d.ts +2 -0
  47. package/lib/commonjs/extensions/mvs/components/formats.js +2 -1
  48. package/lib/commonjs/extensions/mvs/load.d.ts +2 -0
  49. package/lib/commonjs/extensions/mvs/load.js +12 -6
  50. package/lib/commonjs/extensions/rcsb/validation-report/representation.d.ts +5 -0
  51. package/lib/commonjs/mol-canvas3d/canvas3d.d.ts +14 -0
  52. package/lib/commonjs/mol-canvas3d/helper/handle-helper.d.ts +1 -0
  53. package/lib/commonjs/mol-canvas3d/helper/helper.d.ts +2 -0
  54. package/lib/commonjs/mol-canvas3d/passes/bloom.d.ts +37 -0
  55. package/lib/commonjs/mol-canvas3d/passes/bloom.js +272 -0
  56. package/lib/commonjs/mol-canvas3d/passes/draw.d.ts +11 -7
  57. package/lib/commonjs/mol-canvas3d/passes/draw.js +23 -3
  58. package/lib/commonjs/mol-canvas3d/passes/image.d.ts +6 -0
  59. package/lib/commonjs/mol-canvas3d/passes/postprocessing.d.ts +30 -5
  60. package/lib/commonjs/mol-canvas3d/passes/postprocessing.js +27 -32
  61. package/lib/commonjs/mol-geo/geometry/base.d.ts +3 -1
  62. package/lib/commonjs/mol-geo/geometry/base.js +4 -1
  63. package/lib/commonjs/mol-geo/geometry/cylinders/cylinders.d.ts +2 -1
  64. package/lib/commonjs/mol-geo/geometry/cylinders/cylinders.js +4 -1
  65. package/lib/commonjs/mol-geo/geometry/direct-volume/direct-volume.d.ts +2 -1
  66. package/lib/commonjs/mol-geo/geometry/direct-volume/direct-volume.js +4 -1
  67. package/lib/commonjs/mol-geo/geometry/emissive-data.d.ts +26 -0
  68. package/lib/commonjs/mol-geo/geometry/emissive-data.js +80 -0
  69. package/lib/commonjs/mol-geo/geometry/image/image.d.ts +2 -1
  70. package/lib/commonjs/mol-geo/geometry/image/image.js +4 -1
  71. package/lib/commonjs/mol-geo/geometry/lines/lines.d.ts +3 -1
  72. package/lib/commonjs/mol-geo/geometry/lines/lines.js +4 -1
  73. package/lib/commonjs/mol-geo/geometry/mesh/color-smoothing.d.ts +2 -1
  74. package/lib/commonjs/mol-geo/geometry/mesh/color-smoothing.js +36 -2
  75. package/lib/commonjs/mol-geo/geometry/mesh/mesh.d.ts +2 -1
  76. package/lib/commonjs/mol-geo/geometry/mesh/mesh.js +4 -1
  77. package/lib/commonjs/mol-geo/geometry/points/points.d.ts +2 -2
  78. package/lib/commonjs/mol-geo/geometry/points/points.js +4 -1
  79. package/lib/commonjs/mol-geo/geometry/spheres/spheres.d.ts +2 -2
  80. package/lib/commonjs/mol-geo/geometry/spheres/spheres.js +7 -3
  81. package/lib/commonjs/mol-geo/geometry/text/text.d.ts +2 -1
  82. package/lib/commonjs/mol-geo/geometry/text/text.js +4 -1
  83. package/lib/commonjs/mol-geo/geometry/texture-mesh/color-smoothing.d.ts +2 -1
  84. package/lib/commonjs/mol-geo/geometry/texture-mesh/color-smoothing.js +34 -2
  85. package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.d.ts +2 -1
  86. package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.js +3 -0
  87. package/lib/commonjs/mol-gl/renderable/cylinders.d.ts +10 -0
  88. package/lib/commonjs/mol-gl/renderable/direct-volume.d.ts +10 -0
  89. package/lib/commonjs/mol-gl/renderable/image.d.ts +10 -0
  90. package/lib/commonjs/mol-gl/renderable/lines.d.ts +10 -0
  91. package/lib/commonjs/mol-gl/renderable/mesh.d.ts +10 -0
  92. package/lib/commonjs/mol-gl/renderable/points.d.ts +10 -0
  93. package/lib/commonjs/mol-gl/renderable/schema.d.ts +24 -1
  94. package/lib/commonjs/mol-gl/renderable/schema.js +15 -2
  95. package/lib/commonjs/mol-gl/renderable/spheres.d.ts +10 -0
  96. package/lib/commonjs/mol-gl/renderable/text.d.ts +10 -0
  97. package/lib/commonjs/mol-gl/renderable/texture-mesh.d.ts +10 -0
  98. package/lib/commonjs/mol-gl/renderable.d.ts +1 -1
  99. package/lib/commonjs/mol-gl/renderable.js +2 -2
  100. package/lib/commonjs/mol-gl/renderer.d.ts +2 -1
  101. package/lib/commonjs/mol-gl/renderer.js +58 -49
  102. package/lib/commonjs/mol-gl/scene.d.ts +3 -1
  103. package/lib/commonjs/mol-gl/scene.js +26 -1
  104. package/lib/commonjs/mol-gl/shader/bloom/blur.frag.d.ts +1 -0
  105. package/lib/commonjs/mol-gl/shader/bloom/blur.frag.js +32 -0
  106. package/lib/commonjs/mol-gl/shader/bloom/composite.frag.d.ts +1 -0
  107. package/lib/commonjs/mol-gl/shader/bloom/composite.frag.js +37 -0
  108. package/lib/commonjs/mol-gl/shader/bloom/luminosity.frag.d.ts +1 -0
  109. package/lib/commonjs/mol-gl/shader/bloom/luminosity.frag.js +56 -0
  110. package/lib/commonjs/mol-gl/shader/chunks/apply-light-color.glsl.d.ts +2 -2
  111. package/lib/commonjs/mol-gl/shader/chunks/apply-light-color.glsl.js +10 -2
  112. package/lib/commonjs/mol-gl/shader/chunks/assign-color-varying.glsl.d.ts +1 -1
  113. package/lib/commonjs/mol-gl/shader/chunks/assign-color-varying.glsl.js +28 -0
  114. package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.d.ts +1 -1
  115. package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.js +20 -31
  116. package/lib/commonjs/mol-gl/shader/chunks/check-transparency.glsl.d.ts +1 -0
  117. package/lib/commonjs/mol-gl/shader/chunks/check-transparency.glsl.js +20 -0
  118. package/lib/commonjs/mol-gl/shader/chunks/color-frag-params.glsl.d.ts +1 -1
  119. package/lib/commonjs/mol-gl/shader/chunks/color-frag-params.glsl.js +9 -0
  120. package/lib/commonjs/mol-gl/shader/chunks/color-vert-params.glsl.d.ts +1 -1
  121. package/lib/commonjs/mol-gl/shader/chunks/color-vert-params.glsl.js +30 -0
  122. package/lib/commonjs/mol-gl/shader/chunks/common-frag-params.glsl.d.ts +1 -1
  123. package/lib/commonjs/mol-gl/shader/chunks/common-frag-params.glsl.js +1 -0
  124. package/lib/commonjs/mol-gl/shader/cylinders.frag.d.ts +2 -2
  125. package/lib/commonjs/mol-gl/shader/cylinders.frag.js +4 -1
  126. package/lib/commonjs/mol-gl/shader/direct-volume.frag.d.ts +1 -1
  127. package/lib/commonjs/mol-gl/shader/direct-volume.frag.js +17 -11
  128. package/lib/commonjs/mol-gl/shader/image.frag.d.ts +2 -2
  129. package/lib/commonjs/mol-gl/shader/image.frag.js +14 -5
  130. package/lib/commonjs/mol-gl/shader/lines.frag.d.ts +2 -2
  131. package/lib/commonjs/mol-gl/shader/lines.frag.js +4 -1
  132. package/lib/commonjs/mol-gl/shader/mesh.frag.d.ts +2 -2
  133. package/lib/commonjs/mol-gl/shader/mesh.frag.js +4 -1
  134. package/lib/commonjs/mol-gl/shader/points.frag.d.ts +2 -2
  135. package/lib/commonjs/mol-gl/shader/points.frag.js +9 -5
  136. package/lib/commonjs/mol-gl/shader/spheres.frag.d.ts +2 -2
  137. package/lib/commonjs/mol-gl/shader/spheres.frag.js +11 -5
  138. package/lib/commonjs/mol-gl/shader/ssao-blur.frag.d.ts +3 -2
  139. package/lib/commonjs/mol-gl/shader/ssao-blur.frag.js +7 -8
  140. package/lib/commonjs/mol-gl/shader/ssao.frag.d.ts +3 -2
  141. package/lib/commonjs/mol-gl/shader/ssao.frag.js +56 -17
  142. package/lib/commonjs/mol-gl/shader/text.frag.d.ts +2 -2
  143. package/lib/commonjs/mol-gl/shader/text.frag.js +6 -4
  144. package/lib/commonjs/mol-gl/shader-code.d.ts +1 -1
  145. package/lib/commonjs/mol-gl/shader-code.js +9 -3
  146. package/lib/commonjs/mol-gl/webgl/render-item.d.ts +3 -2
  147. package/lib/commonjs/mol-gl/webgl/render-item.js +1 -1
  148. package/lib/commonjs/mol-io/reader/cif/schema/bird.d.ts +1 -1
  149. package/lib/commonjs/mol-io/reader/cif/schema/bird.js +1 -1
  150. package/lib/commonjs/mol-io/reader/cif/schema/ccd.d.ts +1 -1
  151. package/lib/commonjs/mol-io/reader/cif/schema/ccd.js +1 -1
  152. package/lib/commonjs/mol-io/reader/cif/schema/mmcif.d.ts +1 -1
  153. package/lib/commonjs/mol-io/reader/cif/schema/mmcif.js +1 -1
  154. package/lib/commonjs/mol-model/structure/model/types/saccharides.js +1 -1
  155. package/lib/commonjs/mol-model/structure/structure/unit/bonds/data.d.ts +9 -6
  156. package/lib/commonjs/mol-model/structure/structure/unit/bonds/data.js +1 -1
  157. package/lib/commonjs/mol-model/structure/structure/unit/bonds/inter-compute.d.ts +1 -1
  158. package/lib/commonjs/mol-model/structure/structure/unit/bonds/inter-compute.js +7 -4
  159. package/lib/commonjs/mol-model/structure/structure/unit/bonds/intra-compute.d.ts +1 -1
  160. package/lib/commonjs/mol-model/structure/structure/unit/bonds/intra-compute.js +10 -6
  161. package/lib/commonjs/mol-model/structure/structure/unit.d.ts +1 -1
  162. package/lib/commonjs/mol-model/structure/structure/unit.js +5 -2
  163. package/lib/commonjs/mol-model-formats/shape/ply.d.ts +2 -0
  164. package/lib/commonjs/mol-model-formats/structure/property/bonds/index-pair.d.ts +4 -1
  165. package/lib/commonjs/mol-model-formats/structure/property/bonds/index-pair.js +6 -3
  166. package/lib/commonjs/mol-model-props/computed/representations/interactions-inter-unit-cylinder.d.ts +1 -0
  167. package/lib/commonjs/mol-model-props/computed/representations/interactions-intra-unit-cylinder.d.ts +1 -0
  168. package/lib/commonjs/mol-model-props/computed/representations/interactions.d.ts +3 -0
  169. package/lib/commonjs/mol-model-props/integrative/cross-link-restraint/representation.d.ts +4 -0
  170. package/lib/commonjs/mol-plugin/commands.d.ts +1 -208
  171. package/lib/commonjs/mol-plugin-state/helpers/structure-emissive.d.ts +12 -0
  172. package/lib/commonjs/mol-plugin-state/helpers/structure-emissive.js +69 -0
  173. package/lib/commonjs/mol-plugin-state/manager/structure/component.d.ts +3 -1
  174. package/lib/commonjs/mol-plugin-state/manager/structure/component.js +9 -1
  175. package/lib/commonjs/mol-plugin-state/manager/structure/measurement.d.ts +341 -9
  176. package/lib/commonjs/mol-plugin-state/manager/structure/measurement.js +32 -19
  177. package/lib/commonjs/mol-plugin-state/transforms/representation.d.ts +25 -0
  178. package/lib/commonjs/mol-plugin-state/transforms/representation.js +121 -6
  179. package/lib/commonjs/mol-repr/representation.d.ts +6 -2
  180. package/lib/commonjs/mol-repr/representation.js +12 -2
  181. package/lib/commonjs/mol-repr/shape/loci/angle.d.ts +1 -0
  182. package/lib/commonjs/mol-repr/shape/loci/common.d.ts +1 -0
  183. package/lib/commonjs/mol-repr/shape/loci/dihedral.d.ts +1 -0
  184. package/lib/commonjs/mol-repr/shape/loci/distance.d.ts +1 -0
  185. package/lib/commonjs/mol-repr/shape/loci/label.d.ts +1 -0
  186. package/lib/commonjs/mol-repr/shape/loci/orientation.d.ts +1 -0
  187. package/lib/commonjs/mol-repr/shape/loci/plane.d.ts +1 -0
  188. package/lib/commonjs/mol-repr/shape/model/unitcell.d.ts +1 -0
  189. package/lib/commonjs/mol-repr/structure/complex-representation.d.ts +1 -1
  190. package/lib/commonjs/mol-repr/structure/complex-representation.js +7 -1
  191. package/lib/commonjs/mol-repr/structure/complex-visual.d.ts +8 -1
  192. package/lib/commonjs/mol-repr/structure/complex-visual.js +5 -1
  193. package/lib/commonjs/mol-repr/structure/params.d.ts +8 -0
  194. package/lib/commonjs/mol-repr/structure/registry.d.ts +14 -0
  195. package/lib/commonjs/mol-repr/structure/representation/backbone.d.ts +3 -0
  196. package/lib/commonjs/mol-repr/structure/representation/ball-and-stick.d.ts +3 -0
  197. package/lib/commonjs/mol-repr/structure/representation/carbohydrate.d.ts +3 -0
  198. package/lib/commonjs/mol-repr/structure/representation/cartoon.d.ts +3 -0
  199. package/lib/commonjs/mol-repr/structure/representation/ellipsoid.d.ts +3 -0
  200. package/lib/commonjs/mol-repr/structure/representation/gaussian-surface.d.ts +3 -0
  201. package/lib/commonjs/mol-repr/structure/representation/gaussian-volume.d.ts +3 -0
  202. package/lib/commonjs/mol-repr/structure/representation/label.d.ts +3 -0
  203. package/lib/commonjs/mol-repr/structure/representation/line.d.ts +3 -0
  204. package/lib/commonjs/mol-repr/structure/representation/molecular-surface.d.ts +3 -0
  205. package/lib/commonjs/mol-repr/structure/representation/orientation.d.ts +3 -0
  206. package/lib/commonjs/mol-repr/structure/representation/point.d.ts +3 -0
  207. package/lib/commonjs/mol-repr/structure/representation/putty.d.ts +3 -0
  208. package/lib/commonjs/mol-repr/structure/representation/spacefill.d.ts +3 -0
  209. package/lib/commonjs/mol-repr/structure/units-representation.d.ts +1 -1
  210. package/lib/commonjs/mol-repr/structure/units-representation.js +9 -3
  211. package/lib/commonjs/mol-repr/structure/units-visual.d.ts +9 -1
  212. package/lib/commonjs/mol-repr/structure/units-visual.js +5 -1
  213. package/lib/commonjs/mol-repr/structure/visual/bond-inter-unit-cylinder.d.ts +2 -0
  214. package/lib/commonjs/mol-repr/structure/visual/bond-inter-unit-line.d.ts +1 -0
  215. package/lib/commonjs/mol-repr/structure/visual/bond-intra-unit-cylinder.d.ts +2 -0
  216. package/lib/commonjs/mol-repr/structure/visual/bond-intra-unit-line.d.ts +1 -0
  217. package/lib/commonjs/mol-repr/structure/visual/carbohydrate-link-cylinder.d.ts +1 -0
  218. package/lib/commonjs/mol-repr/structure/visual/carbohydrate-symbol-mesh.d.ts +1 -0
  219. package/lib/commonjs/mol-repr/structure/visual/carbohydrate-terminal-link-cylinder.d.ts +1 -0
  220. package/lib/commonjs/mol-repr/structure/visual/element-cross.d.ts +1 -0
  221. package/lib/commonjs/mol-repr/structure/visual/element-point.d.ts +1 -0
  222. package/lib/commonjs/mol-repr/structure/visual/element-sphere.d.ts +4 -0
  223. package/lib/commonjs/mol-repr/structure/visual/ellipsoid-mesh.d.ts +1 -0
  224. package/lib/commonjs/mol-repr/structure/visual/gaussian-density-volume.d.ts +2 -0
  225. package/lib/commonjs/mol-repr/structure/visual/gaussian-surface-mesh.d.ts +4 -0
  226. package/lib/commonjs/mol-repr/structure/visual/gaussian-surface-wireframe.d.ts +1 -0
  227. package/lib/commonjs/mol-repr/structure/visual/label-text.d.ts +1 -0
  228. package/lib/commonjs/mol-repr/structure/visual/molecular-surface-mesh.d.ts +1 -0
  229. package/lib/commonjs/mol-repr/structure/visual/molecular-surface-wireframe.d.ts +1 -0
  230. package/lib/commonjs/mol-repr/structure/visual/nucleotide-atomic-bond.d.ts +2 -0
  231. package/lib/commonjs/mol-repr/structure/visual/nucleotide-atomic-element.d.ts +2 -0
  232. package/lib/commonjs/mol-repr/structure/visual/nucleotide-atomic-ring-fill.d.ts +1 -0
  233. package/lib/commonjs/mol-repr/structure/visual/nucleotide-block-mesh.d.ts +1 -0
  234. package/lib/commonjs/mol-repr/structure/visual/nucleotide-ring-mesh.d.ts +1 -0
  235. package/lib/commonjs/mol-repr/structure/visual/orientation-ellipsoid-mesh.d.ts +1 -0
  236. package/lib/commonjs/mol-repr/structure/visual/polymer-backbone-cylinder.d.ts +2 -0
  237. package/lib/commonjs/mol-repr/structure/visual/polymer-backbone-sphere.d.ts +2 -0
  238. package/lib/commonjs/mol-repr/structure/visual/polymer-direction-wedge.d.ts +1 -0
  239. package/lib/commonjs/mol-repr/structure/visual/polymer-gap-cylinder.d.ts +1 -0
  240. package/lib/commonjs/mol-repr/structure/visual/polymer-trace-mesh.d.ts +1 -0
  241. package/lib/commonjs/mol-repr/structure/visual/polymer-tube-mesh.d.ts +1 -0
  242. package/lib/commonjs/mol-repr/visual.d.ts +6 -1
  243. package/lib/commonjs/mol-repr/visual.js +55 -1
  244. package/lib/commonjs/mol-repr/volume/direct-volume.d.ts +3 -0
  245. package/lib/commonjs/mol-repr/volume/isosurface.d.ts +6 -0
  246. package/lib/commonjs/mol-repr/volume/registry.d.ts +4 -0
  247. package/lib/commonjs/mol-repr/volume/representation.d.ts +2 -1
  248. package/lib/commonjs/mol-repr/volume/representation.js +9 -2
  249. package/lib/commonjs/mol-repr/volume/segment.d.ts +5 -0
  250. package/lib/commonjs/mol-repr/volume/slice.d.ts +3 -0
  251. package/lib/commonjs/mol-theme/emissive.d.ts +40 -0
  252. package/lib/commonjs/mol-theme/emissive.js +137 -0
  253. package/lib/commonjs/mol-util/set.d.ts +1 -1
  254. package/lib/commonjs/mol-util/set.js +17 -1
  255. package/lib/extensions/anvil/behavior.d.ts +1 -0
  256. package/lib/extensions/anvil/representation.d.ts +5 -0
  257. package/lib/extensions/assembly-symmetry/behavior.d.ts +1 -0
  258. package/lib/extensions/assembly-symmetry/representation.d.ts +1 -0
  259. package/lib/extensions/dnatco/confal-pyramids/representation.d.ts +3 -0
  260. package/lib/extensions/dnatco/ntc-tube/representation.d.ts +3 -0
  261. package/lib/extensions/geo-export/glb-exporter.d.ts +1 -1
  262. package/lib/extensions/geo-export/glb-exporter.js +6 -4
  263. package/lib/extensions/mvs/camera.d.ts +2 -0
  264. package/lib/extensions/mvs/camera.js +27 -1
  265. package/lib/extensions/mvs/components/annotation-label/representation.d.ts +2 -0
  266. package/lib/extensions/mvs/components/annotation-label/visual.d.ts +1 -0
  267. package/lib/extensions/mvs/components/custom-label/representation.d.ts +2 -0
  268. package/lib/extensions/mvs/components/custom-label/visual.d.ts +1 -0
  269. package/lib/extensions/mvs/components/formats.d.ts +2 -0
  270. package/lib/extensions/mvs/components/formats.js +2 -1
  271. package/lib/extensions/mvs/load.d.ts +2 -0
  272. package/lib/extensions/mvs/load.js +13 -7
  273. package/lib/extensions/rcsb/validation-report/representation.d.ts +5 -0
  274. package/lib/mol-canvas3d/canvas3d.d.ts +14 -0
  275. package/lib/mol-canvas3d/helper/handle-helper.d.ts +1 -0
  276. package/lib/mol-canvas3d/helper/helper.d.ts +2 -0
  277. package/lib/mol-canvas3d/passes/bloom.d.ts +37 -0
  278. package/lib/mol-canvas3d/passes/bloom.js +268 -0
  279. package/lib/mol-canvas3d/passes/draw.d.ts +11 -7
  280. package/lib/mol-canvas3d/passes/draw.js +23 -3
  281. package/lib/mol-canvas3d/passes/image.d.ts +6 -0
  282. package/lib/mol-canvas3d/passes/postprocessing.d.ts +30 -5
  283. package/lib/mol-canvas3d/passes/postprocessing.js +25 -31
  284. package/lib/mol-geo/geometry/base.d.ts +3 -1
  285. package/lib/mol-geo/geometry/base.js +4 -1
  286. package/lib/mol-geo/geometry/cylinders/cylinders.d.ts +2 -1
  287. package/lib/mol-geo/geometry/cylinders/cylinders.js +4 -1
  288. package/lib/mol-geo/geometry/direct-volume/direct-volume.d.ts +2 -1
  289. package/lib/mol-geo/geometry/direct-volume/direct-volume.js +4 -1
  290. package/lib/mol-geo/geometry/emissive-data.d.ts +26 -0
  291. package/lib/mol-geo/geometry/emissive-data.js +72 -0
  292. package/lib/mol-geo/geometry/image/image.d.ts +2 -1
  293. package/lib/mol-geo/geometry/image/image.js +4 -1
  294. package/lib/mol-geo/geometry/lines/lines.d.ts +3 -1
  295. package/lib/mol-geo/geometry/lines/lines.js +4 -1
  296. package/lib/mol-geo/geometry/mesh/color-smoothing.d.ts +2 -1
  297. package/lib/mol-geo/geometry/mesh/color-smoothing.js +34 -1
  298. package/lib/mol-geo/geometry/mesh/mesh.d.ts +2 -1
  299. package/lib/mol-geo/geometry/mesh/mesh.js +4 -1
  300. package/lib/mol-geo/geometry/points/points.d.ts +2 -2
  301. package/lib/mol-geo/geometry/points/points.js +4 -1
  302. package/lib/mol-geo/geometry/spheres/spheres.d.ts +2 -2
  303. package/lib/mol-geo/geometry/spheres/spheres.js +7 -3
  304. package/lib/mol-geo/geometry/text/text.d.ts +2 -1
  305. package/lib/mol-geo/geometry/text/text.js +4 -1
  306. package/lib/mol-geo/geometry/texture-mesh/color-smoothing.d.ts +2 -1
  307. package/lib/mol-geo/geometry/texture-mesh/color-smoothing.js +32 -1
  308. package/lib/mol-geo/geometry/texture-mesh/texture-mesh.d.ts +2 -1
  309. package/lib/mol-geo/geometry/texture-mesh/texture-mesh.js +3 -0
  310. package/lib/mol-gl/renderable/cylinders.d.ts +10 -0
  311. package/lib/mol-gl/renderable/direct-volume.d.ts +10 -0
  312. package/lib/mol-gl/renderable/image.d.ts +10 -0
  313. package/lib/mol-gl/renderable/lines.d.ts +10 -0
  314. package/lib/mol-gl/renderable/mesh.d.ts +10 -0
  315. package/lib/mol-gl/renderable/points.d.ts +10 -0
  316. package/lib/mol-gl/renderable/schema.d.ts +24 -1
  317. package/lib/mol-gl/renderable/schema.js +14 -1
  318. package/lib/mol-gl/renderable/spheres.d.ts +10 -0
  319. package/lib/mol-gl/renderable/text.d.ts +10 -0
  320. package/lib/mol-gl/renderable/texture-mesh.d.ts +10 -0
  321. package/lib/mol-gl/renderable.d.ts +1 -1
  322. package/lib/mol-gl/renderable.js +2 -2
  323. package/lib/mol-gl/renderer.d.ts +2 -1
  324. package/lib/mol-gl/renderer.js +58 -49
  325. package/lib/mol-gl/scene.d.ts +3 -1
  326. package/lib/mol-gl/scene.js +26 -1
  327. package/lib/mol-gl/shader/bloom/blur.frag.d.ts +1 -0
  328. package/lib/mol-gl/shader/bloom/blur.frag.js +29 -0
  329. package/lib/mol-gl/shader/bloom/composite.frag.d.ts +1 -0
  330. package/lib/mol-gl/shader/bloom/composite.frag.js +34 -0
  331. package/lib/mol-gl/shader/bloom/luminosity.frag.d.ts +1 -0
  332. package/lib/mol-gl/shader/bloom/luminosity.frag.js +53 -0
  333. package/lib/mol-gl/shader/chunks/apply-light-color.glsl.d.ts +2 -2
  334. package/lib/mol-gl/shader/chunks/apply-light-color.glsl.js +10 -2
  335. package/lib/mol-gl/shader/chunks/assign-color-varying.glsl.d.ts +1 -1
  336. package/lib/mol-gl/shader/chunks/assign-color-varying.glsl.js +28 -0
  337. package/lib/mol-gl/shader/chunks/assign-material-color.glsl.d.ts +1 -1
  338. package/lib/mol-gl/shader/chunks/assign-material-color.glsl.js +20 -31
  339. package/lib/mol-gl/shader/chunks/check-transparency.glsl.d.ts +1 -0
  340. package/lib/mol-gl/shader/chunks/check-transparency.glsl.js +17 -0
  341. package/lib/mol-gl/shader/chunks/color-frag-params.glsl.d.ts +1 -1
  342. package/lib/mol-gl/shader/chunks/color-frag-params.glsl.js +9 -0
  343. package/lib/mol-gl/shader/chunks/color-vert-params.glsl.d.ts +1 -1
  344. package/lib/mol-gl/shader/chunks/color-vert-params.glsl.js +30 -0
  345. package/lib/mol-gl/shader/chunks/common-frag-params.glsl.d.ts +1 -1
  346. package/lib/mol-gl/shader/chunks/common-frag-params.glsl.js +1 -0
  347. package/lib/mol-gl/shader/cylinders.frag.d.ts +2 -2
  348. package/lib/mol-gl/shader/cylinders.frag.js +4 -1
  349. package/lib/mol-gl/shader/direct-volume.frag.d.ts +1 -1
  350. package/lib/mol-gl/shader/direct-volume.frag.js +17 -11
  351. package/lib/mol-gl/shader/image.frag.d.ts +2 -2
  352. package/lib/mol-gl/shader/image.frag.js +14 -5
  353. package/lib/mol-gl/shader/lines.frag.d.ts +2 -2
  354. package/lib/mol-gl/shader/lines.frag.js +4 -1
  355. package/lib/mol-gl/shader/mesh.frag.d.ts +2 -2
  356. package/lib/mol-gl/shader/mesh.frag.js +4 -1
  357. package/lib/mol-gl/shader/points.frag.d.ts +2 -2
  358. package/lib/mol-gl/shader/points.frag.js +9 -5
  359. package/lib/mol-gl/shader/spheres.frag.d.ts +2 -2
  360. package/lib/mol-gl/shader/spheres.frag.js +11 -5
  361. package/lib/mol-gl/shader/ssao-blur.frag.d.ts +3 -2
  362. package/lib/mol-gl/shader/ssao-blur.frag.js +7 -8
  363. package/lib/mol-gl/shader/ssao.frag.d.ts +3 -2
  364. package/lib/mol-gl/shader/ssao.frag.js +56 -17
  365. package/lib/mol-gl/shader/text.frag.d.ts +2 -2
  366. package/lib/mol-gl/shader/text.frag.js +6 -4
  367. package/lib/mol-gl/shader-code.d.ts +1 -1
  368. package/lib/mol-gl/shader-code.js +9 -3
  369. package/lib/mol-gl/webgl/render-item.d.ts +3 -2
  370. package/lib/mol-gl/webgl/render-item.js +1 -1
  371. package/lib/mol-io/reader/cif/schema/bird.d.ts +1 -1
  372. package/lib/mol-io/reader/cif/schema/bird.js +1 -1
  373. package/lib/mol-io/reader/cif/schema/ccd.d.ts +1 -1
  374. package/lib/mol-io/reader/cif/schema/ccd.js +1 -1
  375. package/lib/mol-io/reader/cif/schema/mmcif.d.ts +1 -1
  376. package/lib/mol-io/reader/cif/schema/mmcif.js +1 -1
  377. package/lib/mol-model/structure/model/types/saccharides.js +1 -1
  378. package/lib/mol-model/structure/structure/unit/bonds/data.d.ts +9 -6
  379. package/lib/mol-model/structure/structure/unit/bonds/data.js +1 -1
  380. package/lib/mol-model/structure/structure/unit/bonds/inter-compute.d.ts +1 -1
  381. package/lib/mol-model/structure/structure/unit/bonds/inter-compute.js +7 -4
  382. package/lib/mol-model/structure/structure/unit/bonds/intra-compute.d.ts +1 -1
  383. package/lib/mol-model/structure/structure/unit/bonds/intra-compute.js +10 -6
  384. package/lib/mol-model/structure/structure/unit.d.ts +1 -1
  385. package/lib/mol-model/structure/structure/unit.js +5 -2
  386. package/lib/mol-model-formats/shape/ply.d.ts +2 -0
  387. package/lib/mol-model-formats/structure/property/bonds/index-pair.d.ts +4 -1
  388. package/lib/mol-model-formats/structure/property/bonds/index-pair.js +6 -3
  389. package/lib/mol-model-props/computed/representations/interactions-inter-unit-cylinder.d.ts +1 -0
  390. package/lib/mol-model-props/computed/representations/interactions-intra-unit-cylinder.d.ts +1 -0
  391. package/lib/mol-model-props/computed/representations/interactions.d.ts +3 -0
  392. package/lib/mol-model-props/integrative/cross-link-restraint/representation.d.ts +4 -0
  393. package/lib/mol-plugin/commands.d.ts +1 -208
  394. package/lib/mol-plugin/version.js +2 -2
  395. package/lib/mol-plugin-state/helpers/structure-emissive.d.ts +12 -0
  396. package/lib/mol-plugin-state/helpers/structure-emissive.js +64 -0
  397. package/lib/mol-plugin-state/manager/structure/component.d.ts +3 -1
  398. package/lib/mol-plugin-state/manager/structure/component.js +9 -1
  399. package/lib/mol-plugin-state/manager/structure/measurement.d.ts +341 -9
  400. package/lib/mol-plugin-state/manager/structure/measurement.js +32 -19
  401. package/lib/mol-plugin-state/transforms/representation.d.ts +25 -0
  402. package/lib/mol-plugin-state/transforms/representation.js +120 -5
  403. package/lib/mol-repr/representation.d.ts +6 -2
  404. package/lib/mol-repr/representation.js +12 -2
  405. package/lib/mol-repr/shape/loci/angle.d.ts +1 -0
  406. package/lib/mol-repr/shape/loci/common.d.ts +1 -0
  407. package/lib/mol-repr/shape/loci/dihedral.d.ts +1 -0
  408. package/lib/mol-repr/shape/loci/distance.d.ts +1 -0
  409. package/lib/mol-repr/shape/loci/label.d.ts +1 -0
  410. package/lib/mol-repr/shape/loci/orientation.d.ts +1 -0
  411. package/lib/mol-repr/shape/loci/plane.d.ts +1 -0
  412. package/lib/mol-repr/shape/model/unitcell.d.ts +1 -0
  413. package/lib/mol-repr/structure/complex-representation.d.ts +1 -1
  414. package/lib/mol-repr/structure/complex-representation.js +7 -1
  415. package/lib/mol-repr/structure/complex-visual.d.ts +8 -1
  416. package/lib/mol-repr/structure/complex-visual.js +5 -1
  417. package/lib/mol-repr/structure/params.d.ts +8 -0
  418. package/lib/mol-repr/structure/registry.d.ts +14 -0
  419. package/lib/mol-repr/structure/representation/backbone.d.ts +3 -0
  420. package/lib/mol-repr/structure/representation/ball-and-stick.d.ts +3 -0
  421. package/lib/mol-repr/structure/representation/carbohydrate.d.ts +3 -0
  422. package/lib/mol-repr/structure/representation/cartoon.d.ts +3 -0
  423. package/lib/mol-repr/structure/representation/ellipsoid.d.ts +3 -0
  424. package/lib/mol-repr/structure/representation/gaussian-surface.d.ts +3 -0
  425. package/lib/mol-repr/structure/representation/gaussian-volume.d.ts +3 -0
  426. package/lib/mol-repr/structure/representation/label.d.ts +3 -0
  427. package/lib/mol-repr/structure/representation/line.d.ts +3 -0
  428. package/lib/mol-repr/structure/representation/molecular-surface.d.ts +3 -0
  429. package/lib/mol-repr/structure/representation/orientation.d.ts +3 -0
  430. package/lib/mol-repr/structure/representation/point.d.ts +3 -0
  431. package/lib/mol-repr/structure/representation/putty.d.ts +3 -0
  432. package/lib/mol-repr/structure/representation/spacefill.d.ts +3 -0
  433. package/lib/mol-repr/structure/units-representation.d.ts +1 -1
  434. package/lib/mol-repr/structure/units-representation.js +9 -3
  435. package/lib/mol-repr/structure/units-visual.d.ts +9 -1
  436. package/lib/mol-repr/structure/units-visual.js +5 -1
  437. package/lib/mol-repr/structure/visual/bond-inter-unit-cylinder.d.ts +2 -0
  438. package/lib/mol-repr/structure/visual/bond-inter-unit-line.d.ts +1 -0
  439. package/lib/mol-repr/structure/visual/bond-intra-unit-cylinder.d.ts +2 -0
  440. package/lib/mol-repr/structure/visual/bond-intra-unit-line.d.ts +1 -0
  441. package/lib/mol-repr/structure/visual/carbohydrate-link-cylinder.d.ts +1 -0
  442. package/lib/mol-repr/structure/visual/carbohydrate-symbol-mesh.d.ts +1 -0
  443. package/lib/mol-repr/structure/visual/carbohydrate-terminal-link-cylinder.d.ts +1 -0
  444. package/lib/mol-repr/structure/visual/element-cross.d.ts +1 -0
  445. package/lib/mol-repr/structure/visual/element-point.d.ts +1 -0
  446. package/lib/mol-repr/structure/visual/element-sphere.d.ts +4 -0
  447. package/lib/mol-repr/structure/visual/ellipsoid-mesh.d.ts +1 -0
  448. package/lib/mol-repr/structure/visual/gaussian-density-volume.d.ts +2 -0
  449. package/lib/mol-repr/structure/visual/gaussian-surface-mesh.d.ts +4 -0
  450. package/lib/mol-repr/structure/visual/gaussian-surface-wireframe.d.ts +1 -0
  451. package/lib/mol-repr/structure/visual/label-text.d.ts +1 -0
  452. package/lib/mol-repr/structure/visual/molecular-surface-mesh.d.ts +1 -0
  453. package/lib/mol-repr/structure/visual/molecular-surface-wireframe.d.ts +1 -0
  454. package/lib/mol-repr/structure/visual/nucleotide-atomic-bond.d.ts +2 -0
  455. package/lib/mol-repr/structure/visual/nucleotide-atomic-element.d.ts +2 -0
  456. package/lib/mol-repr/structure/visual/nucleotide-atomic-ring-fill.d.ts +1 -0
  457. package/lib/mol-repr/structure/visual/nucleotide-block-mesh.d.ts +1 -0
  458. package/lib/mol-repr/structure/visual/nucleotide-ring-mesh.d.ts +1 -0
  459. package/lib/mol-repr/structure/visual/orientation-ellipsoid-mesh.d.ts +1 -0
  460. package/lib/mol-repr/structure/visual/polymer-backbone-cylinder.d.ts +2 -0
  461. package/lib/mol-repr/structure/visual/polymer-backbone-sphere.d.ts +2 -0
  462. package/lib/mol-repr/structure/visual/polymer-direction-wedge.d.ts +1 -0
  463. package/lib/mol-repr/structure/visual/polymer-gap-cylinder.d.ts +1 -0
  464. package/lib/mol-repr/structure/visual/polymer-trace-mesh.d.ts +1 -0
  465. package/lib/mol-repr/structure/visual/polymer-tube-mesh.d.ts +1 -0
  466. package/lib/mol-repr/visual.d.ts +6 -1
  467. package/lib/mol-repr/visual.js +57 -3
  468. package/lib/mol-repr/volume/direct-volume.d.ts +3 -0
  469. package/lib/mol-repr/volume/isosurface.d.ts +6 -0
  470. package/lib/mol-repr/volume/registry.d.ts +4 -0
  471. package/lib/mol-repr/volume/representation.d.ts +2 -1
  472. package/lib/mol-repr/volume/representation.js +9 -2
  473. package/lib/mol-repr/volume/segment.d.ts +5 -0
  474. package/lib/mol-repr/volume/slice.d.ts +3 -0
  475. package/lib/mol-theme/emissive.d.ts +40 -0
  476. package/lib/mol-theme/emissive.js +134 -0
  477. package/lib/mol-util/set.d.ts +1 -1
  478. package/lib/mol-util/set.js +17 -1
  479. package/package.json +19 -18

There are too many changes on this page to be displayed.


The amount of changes on this page would crash your brower.

You can still verify the content by downloading the package file manually.