molstar 3.5.0 → 3.7.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (359) hide show
  1. package/build/viewer/index.html +1 -1
  2. package/build/viewer/molstar.css +1 -1
  3. package/build/viewer/molstar.js +1 -1
  4. package/build/viewer/molstar.js.LICENSE.txt +12 -14
  5. package/lib/apps/docking-viewer/index.js +1 -1
  6. package/lib/apps/viewer/app.js +1 -1
  7. package/lib/apps/viewer/index.html +1 -1
  8. package/lib/cli/chem-comp-dict/util.d.ts +20 -20
  9. package/lib/cli/cifschema/util/cif-dic.d.ts +1 -1
  10. package/lib/cli/cifschema/util/cif-dic.js +7 -5
  11. package/lib/cli/cifschema/util/generate.d.ts +1 -1
  12. package/lib/cli/cifschema/util/generate.js +12 -3
  13. package/lib/cli/cifschema/util/schema.d.ts +3 -3
  14. package/lib/cli/cifschema/util/schema.js +1 -1
  15. package/lib/commonjs/apps/docking-viewer/index.js +2 -2
  16. package/lib/commonjs/apps/viewer/app.js +2 -2
  17. package/lib/commonjs/cli/chem-comp-dict/util.d.ts +20 -20
  18. package/lib/commonjs/cli/cifschema/util/cif-dic.d.ts +1 -1
  19. package/lib/commonjs/cli/cifschema/util/cif-dic.js +7 -5
  20. package/lib/commonjs/cli/cifschema/util/generate.d.ts +1 -1
  21. package/lib/commonjs/cli/cifschema/util/generate.js +12 -3
  22. package/lib/commonjs/cli/cifschema/util/schema.d.ts +3 -3
  23. package/lib/commonjs/cli/cifschema/util/schema.js +1 -1
  24. package/lib/commonjs/examples/alpha-orbitals/index.js +22 -17
  25. package/lib/commonjs/examples/basic-wrapper/index.js +2 -2
  26. package/lib/commonjs/examples/lighting/index.js +2 -2
  27. package/lib/commonjs/examples/proteopedia-wrapper/index.js +2 -2
  28. package/lib/commonjs/extensions/anvil/behavior.d.ts +1 -0
  29. package/lib/commonjs/extensions/anvil/representation.d.ts +4 -0
  30. package/lib/commonjs/extensions/cellpack/representation.d.ts +1 -0
  31. package/lib/commonjs/extensions/dnatco/confal-pyramids/representation.d.ts +3 -0
  32. package/lib/commonjs/extensions/rcsb/assembly-symmetry/behavior.d.ts +1 -0
  33. package/lib/commonjs/extensions/rcsb/assembly-symmetry/representation.d.ts +1 -0
  34. package/lib/commonjs/extensions/rcsb/validation-report/representation.d.ts +5 -0
  35. package/lib/commonjs/mol-canvas3d/canvas3d.d.ts +2 -0
  36. package/lib/commonjs/mol-canvas3d/helper/camera-helper.d.ts +1 -0
  37. package/lib/commonjs/mol-canvas3d/helper/handle-helper.d.ts +1 -0
  38. package/lib/commonjs/mol-canvas3d/helper/helper.d.ts +2 -0
  39. package/lib/commonjs/mol-canvas3d/passes/image.d.ts +1 -0
  40. package/lib/commonjs/mol-data/db/column.d.ts +10 -3
  41. package/lib/commonjs/mol-data/db/column.js +39 -17
  42. package/lib/commonjs/mol-geo/geometry/color-data.d.ts +2 -8
  43. package/lib/commonjs/mol-geo/geometry/color-data.js +16 -3
  44. package/lib/commonjs/mol-geo/geometry/cylinders/cylinders.d.ts +4 -2
  45. package/lib/commonjs/mol-geo/geometry/cylinders/cylinders.js +4 -3
  46. package/lib/commonjs/mol-geo/geometry/mesh/mesh.d.ts +2 -1
  47. package/lib/commonjs/mol-geo/geometry/mesh/mesh.js +4 -3
  48. package/lib/commonjs/mol-geo/geometry/spheres/spheres.d.ts +2 -1
  49. package/lib/commonjs/mol-geo/geometry/spheres/spheres.js +4 -3
  50. package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.d.ts +2 -1
  51. package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.js +16 -5
  52. package/lib/commonjs/mol-gl/renderable/cylinders.d.ts +2 -1
  53. package/lib/commonjs/mol-gl/renderable/cylinders.js +2 -2
  54. package/lib/commonjs/mol-gl/renderable/mesh.d.ts +2 -1
  55. package/lib/commonjs/mol-gl/renderable/mesh.js +2 -2
  56. package/lib/commonjs/mol-gl/renderable/spheres.d.ts +2 -1
  57. package/lib/commonjs/mol-gl/renderable/spheres.js +2 -2
  58. package/lib/commonjs/mol-gl/renderable/texture-mesh.d.ts +2 -1
  59. package/lib/commonjs/mol-gl/renderable/texture-mesh.js +2 -2
  60. package/lib/commonjs/mol-gl/renderer.js +54 -23
  61. package/lib/commonjs/mol-gl/shader/chunks/apply-interior-color.glsl.d.ts +1 -1
  62. package/lib/commonjs/mol-gl/shader/chunks/apply-interior-color.glsl.js +1 -1
  63. package/lib/commonjs/mol-gl/shader/chunks/check-picking-alpha.glsl.d.ts +1 -1
  64. package/lib/commonjs/mol-gl/shader/chunks/check-picking-alpha.glsl.js +1 -1
  65. package/lib/commonjs/mol-gl/shader/chunks/color-vert-params.glsl.d.ts +1 -1
  66. package/lib/commonjs/mol-gl/shader/chunks/color-vert-params.glsl.js +1 -1
  67. package/lib/commonjs/mol-gl/shader/chunks/wboit-write.glsl.d.ts +2 -2
  68. package/lib/commonjs/mol-gl/shader/chunks/wboit-write.glsl.js +2 -2
  69. package/lib/commonjs/mol-gl/shader/direct-volume.frag.d.ts +1 -1
  70. package/lib/commonjs/mol-gl/shader/direct-volume.frag.js +1 -1
  71. package/lib/commonjs/mol-gl/shader/image.frag.d.ts +2 -2
  72. package/lib/commonjs/mol-gl/shader/image.frag.js +2 -2
  73. package/lib/commonjs/mol-gl/shader/lines.frag.d.ts +2 -2
  74. package/lib/commonjs/mol-gl/shader/lines.frag.js +2 -2
  75. package/lib/commonjs/mol-gl/shader/points.frag.d.ts +2 -2
  76. package/lib/commonjs/mol-gl/shader/points.frag.js +2 -2
  77. package/lib/commonjs/mol-gl/shader/text.frag.d.ts +2 -2
  78. package/lib/commonjs/mol-gl/shader/text.frag.js +2 -2
  79. package/lib/commonjs/mol-gl/webgl/buffer.d.ts +2 -2
  80. package/lib/commonjs/mol-gl/webgl/buffer.js +12 -12
  81. package/lib/commonjs/mol-gl/webgl/program.d.ts +1 -1
  82. package/lib/commonjs/mol-gl/webgl/program.js +10 -4
  83. package/lib/commonjs/mol-io/reader/cif/schema/bird.d.ts +8 -8
  84. package/lib/commonjs/mol-io/reader/cif/schema/bird.js +12 -11
  85. package/lib/commonjs/mol-io/reader/cif/schema/ccd-extras.d.ts +1 -1
  86. package/lib/commonjs/mol-io/reader/cif/schema/ccd.d.ts +12 -12
  87. package/lib/commonjs/mol-io/reader/cif/schema/ccd.js +13 -12
  88. package/lib/commonjs/mol-io/reader/cif/schema/mmcif-extras.d.ts +5 -5
  89. package/lib/commonjs/mol-io/reader/cif/schema/mmcif-extras.js +2 -2
  90. package/lib/commonjs/mol-io/reader/cif/schema/mmcif.d.ts +30 -26
  91. package/lib/commonjs/mol-io/reader/cif/schema/mmcif.js +44 -39
  92. package/lib/commonjs/mol-io/reader/cif/schema.d.ts +1 -1
  93. package/lib/commonjs/mol-io/reader/cif/schema.js +22 -2
  94. package/lib/commonjs/mol-io/writer/ligand-encoder.d.ts +4 -2
  95. package/lib/commonjs/mol-io/writer/ligand-encoder.js +9 -4
  96. package/lib/commonjs/mol-io/writer/mol/encoder.js +17 -5
  97. package/lib/commonjs/mol-io/writer/mol2/encoder.js +17 -4
  98. package/lib/commonjs/mol-model/structure/model/model.js +14 -6
  99. package/lib/commonjs/mol-model/structure/model/properties/common.js +1 -1
  100. package/lib/commonjs/mol-model/structure/model/types.d.ts +19 -17
  101. package/lib/commonjs/mol-model/structure/model/types.js +30 -31
  102. package/lib/commonjs/mol-model/structure/query/queries/generators.js +1 -1
  103. package/lib/commonjs/mol-model/structure/structure/properties.d.ts +1 -1
  104. package/lib/commonjs/mol-model/structure/structure/unit/bonds/inter-compute.js +2 -4
  105. package/lib/commonjs/mol-model/structure/structure/unit/bonds/intra-compute.js +1 -3
  106. package/lib/commonjs/mol-model/structure/structure/unit/rings.js +3 -0
  107. package/lib/commonjs/mol-model-formats/shape/ply.d.ts +2 -0
  108. package/lib/commonjs/mol-model-formats/structure/basic/entities.js +1 -1
  109. package/lib/commonjs/mol-model-formats/structure/basic/schema.d.ts +2 -2
  110. package/lib/commonjs/mol-model-formats/structure/common/component.d.ts +3 -3
  111. package/lib/commonjs/mol-model-formats/structure/common/component.js +46 -46
  112. package/lib/commonjs/mol-model-formats/structure/pdb/atom-site.d.ts +2 -2
  113. package/lib/commonjs/mol-model-formats/structure/pdb/atom-site.js +72 -7
  114. package/lib/commonjs/mol-model-formats/structure/pdb/secondary-structure.js +11 -11
  115. package/lib/commonjs/mol-model-formats/structure/pdb/to-cif.js +7 -2
  116. package/lib/commonjs/mol-model-formats/structure/property/bonds/chem_comp.js +1 -1
  117. package/lib/commonjs/mol-model-formats/structure/property/bonds/struct_conn.js +1 -1
  118. package/lib/commonjs/mol-model-props/computed/representations/interactions-inter-unit-cylinder.d.ts +1 -0
  119. package/lib/commonjs/mol-model-props/computed/representations/interactions-intra-unit-cylinder.d.ts +1 -0
  120. package/lib/commonjs/mol-model-props/computed/representations/interactions.d.ts +3 -0
  121. package/lib/commonjs/mol-model-props/integrative/cross-link-restraint/representation.d.ts +4 -0
  122. package/lib/commonjs/mol-plugin/behavior/dynamic/volume-streaming/util.js +3 -2
  123. package/lib/commonjs/mol-plugin/commands.d.ts +1 -0
  124. package/lib/commonjs/mol-plugin/util/viewport-screenshot.d.ts +3 -0
  125. package/lib/commonjs/mol-plugin-state/actions/structure.d.ts +6 -6
  126. package/lib/commonjs/mol-plugin-state/helpers/structure-selection-query.d.ts +1 -1
  127. package/lib/commonjs/mol-plugin-state/helpers/structure-selection-query.js +1 -1
  128. package/lib/commonjs/mol-plugin-state/transforms/representation.d.ts +6 -0
  129. package/lib/commonjs/mol-plugin-ui/base.d.ts +3 -1
  130. package/lib/commonjs/mol-plugin-ui/controls/color.d.ts +1 -1
  131. package/lib/commonjs/mol-plugin-ui/controls/common.d.ts +2 -0
  132. package/lib/commonjs/mol-plugin-ui/hooks/use-behavior.d.ts +1 -1
  133. package/lib/commonjs/mol-plugin-ui/hooks/use-behavior.js +21 -7
  134. package/lib/commonjs/mol-plugin-ui/plugin.d.ts +2 -0
  135. package/lib/commonjs/mol-plugin-ui/plugin.js +2 -2
  136. package/lib/commonjs/mol-plugin-ui/react18.d.ts +11 -0
  137. package/lib/commonjs/mol-plugin-ui/react18.js +38 -0
  138. package/lib/commonjs/mol-plugin-ui/spec.d.ts +1 -0
  139. package/lib/commonjs/mol-plugin-ui/state/common.js +6 -7
  140. package/lib/commonjs/mol-plugin-ui/structure/focus.d.ts +1 -1
  141. package/lib/commonjs/mol-plugin-ui/structure/focus.js +2 -2
  142. package/lib/commonjs/mol-plugin-ui/task.d.ts +2 -21
  143. package/lib/commonjs/mol-plugin-ui/task.js +39 -43
  144. package/lib/commonjs/mol-plugin-ui/viewport/help.d.ts +4 -1
  145. package/lib/commonjs/mol-repr/shape/loci/angle.d.ts +1 -0
  146. package/lib/commonjs/mol-repr/shape/loci/dihedral.d.ts +1 -0
  147. package/lib/commonjs/mol-repr/shape/loci/orientation.d.ts +1 -0
  148. package/lib/commonjs/mol-repr/shape/loci/plane.d.ts +1 -0
  149. package/lib/commonjs/mol-repr/shape/model/unitcell.d.ts +1 -0
  150. package/lib/commonjs/mol-repr/structure/complex-visual.d.ts +3 -0
  151. package/lib/commonjs/mol-repr/structure/params.d.ts +4 -0
  152. package/lib/commonjs/mol-repr/structure/registry.d.ts +10 -0
  153. package/lib/commonjs/mol-repr/structure/representation/backbone.d.ts +3 -0
  154. package/lib/commonjs/mol-repr/structure/representation/ball-and-stick.d.ts +3 -0
  155. package/lib/commonjs/mol-repr/structure/representation/carbohydrate.d.ts +3 -0
  156. package/lib/commonjs/mol-repr/structure/representation/cartoon.d.ts +3 -0
  157. package/lib/commonjs/mol-repr/structure/representation/ellipsoid.d.ts +3 -0
  158. package/lib/commonjs/mol-repr/structure/representation/gaussian-surface.d.ts +3 -0
  159. package/lib/commonjs/mol-repr/structure/representation/molecular-surface.d.ts +3 -0
  160. package/lib/commonjs/mol-repr/structure/representation/orientation.d.ts +3 -0
  161. package/lib/commonjs/mol-repr/structure/representation/putty.d.ts +3 -0
  162. package/lib/commonjs/mol-repr/structure/representation/spacefill.d.ts +3 -0
  163. package/lib/commonjs/mol-repr/structure/units-visual.d.ts +4 -0
  164. package/lib/commonjs/mol-repr/structure/visual/bond-inter-unit-cylinder.d.ts +2 -0
  165. package/lib/commonjs/mol-repr/structure/visual/bond-intra-unit-cylinder.d.ts +2 -0
  166. package/lib/commonjs/mol-repr/structure/visual/carbohydrate-link-cylinder.d.ts +1 -0
  167. package/lib/commonjs/mol-repr/structure/visual/carbohydrate-symbol-mesh.d.ts +1 -0
  168. package/lib/commonjs/mol-repr/structure/visual/carbohydrate-terminal-link-cylinder.d.ts +1 -0
  169. package/lib/commonjs/mol-repr/structure/visual/element-sphere.d.ts +2 -0
  170. package/lib/commonjs/mol-repr/structure/visual/ellipsoid-mesh.d.ts +1 -0
  171. package/lib/commonjs/mol-repr/structure/visual/gaussian-surface-mesh.d.ts +4 -0
  172. package/lib/commonjs/mol-repr/structure/visual/molecular-surface-mesh.d.ts +1 -0
  173. package/lib/commonjs/mol-repr/structure/visual/nucleotide-block-mesh.d.ts +1 -0
  174. package/lib/commonjs/mol-repr/structure/visual/nucleotide-ring-mesh.d.ts +1 -0
  175. package/lib/commonjs/mol-repr/structure/visual/orientation-ellipsoid-mesh.d.ts +1 -0
  176. package/lib/commonjs/mol-repr/structure/visual/polymer-backbone-cylinder.d.ts +2 -0
  177. package/lib/commonjs/mol-repr/structure/visual/polymer-backbone-sphere.d.ts +2 -0
  178. package/lib/commonjs/mol-repr/structure/visual/polymer-direction-wedge.d.ts +1 -0
  179. package/lib/commonjs/mol-repr/structure/visual/polymer-gap-cylinder.d.ts +1 -0
  180. package/lib/commonjs/mol-repr/structure/visual/polymer-trace-mesh.d.ts +1 -0
  181. package/lib/commonjs/mol-repr/structure/visual/polymer-tube-mesh.d.ts +1 -0
  182. package/lib/commonjs/mol-repr/util.d.ts +2 -1
  183. package/lib/commonjs/mol-repr/util.js +2 -2
  184. package/lib/commonjs/mol-repr/volume/isosurface.d.ts +5 -0
  185. package/lib/commonjs/mol-repr/volume/registry.d.ts +1 -0
  186. package/lib/commonjs/mol-theme/color.d.ts +9 -2
  187. package/lib/commonjs/mol-theme/color.js +1 -1
  188. package/lib/commonjs/servers/model/server/query.js +1 -3
  189. package/lib/commonjs/servers/model/version.d.ts +1 -1
  190. package/lib/commonjs/servers/model/version.js +1 -1
  191. package/lib/examples/alpha-orbitals/index.js +21 -16
  192. package/lib/examples/basic-wrapper/index.js +1 -1
  193. package/lib/examples/lighting/index.js +1 -1
  194. package/lib/examples/proteopedia-wrapper/index.js +1 -1
  195. package/lib/extensions/anvil/behavior.d.ts +1 -0
  196. package/lib/extensions/anvil/representation.d.ts +4 -0
  197. package/lib/extensions/cellpack/representation.d.ts +1 -0
  198. package/lib/extensions/dnatco/confal-pyramids/representation.d.ts +3 -0
  199. package/lib/extensions/rcsb/assembly-symmetry/behavior.d.ts +1 -0
  200. package/lib/extensions/rcsb/assembly-symmetry/representation.d.ts +1 -0
  201. package/lib/extensions/rcsb/validation-report/representation.d.ts +5 -0
  202. package/lib/mol-canvas3d/canvas3d.d.ts +2 -0
  203. package/lib/mol-canvas3d/helper/camera-helper.d.ts +1 -0
  204. package/lib/mol-canvas3d/helper/handle-helper.d.ts +1 -0
  205. package/lib/mol-canvas3d/helper/helper.d.ts +2 -0
  206. package/lib/mol-canvas3d/passes/image.d.ts +1 -0
  207. package/lib/mol-data/db/column.d.ts +10 -3
  208. package/lib/mol-data/db/column.js +39 -18
  209. package/lib/mol-geo/geometry/color-data.d.ts +2 -8
  210. package/lib/mol-geo/geometry/color-data.js +16 -3
  211. package/lib/mol-geo/geometry/cylinders/cylinders.d.ts +4 -2
  212. package/lib/mol-geo/geometry/cylinders/cylinders.js +4 -3
  213. package/lib/mol-geo/geometry/mesh/mesh.d.ts +2 -1
  214. package/lib/mol-geo/geometry/mesh/mesh.js +4 -3
  215. package/lib/mol-geo/geometry/spheres/spheres.d.ts +2 -1
  216. package/lib/mol-geo/geometry/spheres/spheres.js +4 -3
  217. package/lib/mol-geo/geometry/texture-mesh/texture-mesh.d.ts +2 -1
  218. package/lib/mol-geo/geometry/texture-mesh/texture-mesh.js +16 -5
  219. package/lib/mol-gl/renderable/cylinders.d.ts +2 -1
  220. package/lib/mol-gl/renderable/cylinders.js +2 -2
  221. package/lib/mol-gl/renderable/mesh.d.ts +2 -1
  222. package/lib/mol-gl/renderable/mesh.js +2 -2
  223. package/lib/mol-gl/renderable/spheres.d.ts +2 -1
  224. package/lib/mol-gl/renderable/spheres.js +2 -2
  225. package/lib/mol-gl/renderable/texture-mesh.d.ts +2 -1
  226. package/lib/mol-gl/renderable/texture-mesh.js +2 -2
  227. package/lib/mol-gl/renderer.js +54 -23
  228. package/lib/mol-gl/shader/chunks/apply-interior-color.glsl.d.ts +1 -1
  229. package/lib/mol-gl/shader/chunks/apply-interior-color.glsl.js +1 -1
  230. package/lib/mol-gl/shader/chunks/check-picking-alpha.glsl.d.ts +1 -1
  231. package/lib/mol-gl/shader/chunks/check-picking-alpha.glsl.js +1 -1
  232. package/lib/mol-gl/shader/chunks/color-vert-params.glsl.d.ts +1 -1
  233. package/lib/mol-gl/shader/chunks/color-vert-params.glsl.js +1 -1
  234. package/lib/mol-gl/shader/chunks/wboit-write.glsl.d.ts +2 -2
  235. package/lib/mol-gl/shader/chunks/wboit-write.glsl.js +2 -2
  236. package/lib/mol-gl/shader/direct-volume.frag.d.ts +1 -1
  237. package/lib/mol-gl/shader/direct-volume.frag.js +1 -1
  238. package/lib/mol-gl/shader/image.frag.d.ts +2 -2
  239. package/lib/mol-gl/shader/image.frag.js +2 -2
  240. package/lib/mol-gl/shader/lines.frag.d.ts +2 -2
  241. package/lib/mol-gl/shader/lines.frag.js +2 -2
  242. package/lib/mol-gl/shader/points.frag.d.ts +2 -2
  243. package/lib/mol-gl/shader/points.frag.js +2 -2
  244. package/lib/mol-gl/shader/text.frag.d.ts +2 -2
  245. package/lib/mol-gl/shader/text.frag.js +2 -2
  246. package/lib/mol-gl/webgl/buffer.d.ts +2 -2
  247. package/lib/mol-gl/webgl/buffer.js +12 -12
  248. package/lib/mol-gl/webgl/program.d.ts +1 -1
  249. package/lib/mol-gl/webgl/program.js +10 -4
  250. package/lib/mol-io/reader/cif/schema/bird.d.ts +8 -8
  251. package/lib/mol-io/reader/cif/schema/bird.js +12 -11
  252. package/lib/mol-io/reader/cif/schema/ccd-extras.d.ts +1 -1
  253. package/lib/mol-io/reader/cif/schema/ccd.d.ts +12 -12
  254. package/lib/mol-io/reader/cif/schema/ccd.js +13 -12
  255. package/lib/mol-io/reader/cif/schema/mmcif-extras.d.ts +5 -5
  256. package/lib/mol-io/reader/cif/schema/mmcif-extras.js +2 -2
  257. package/lib/mol-io/reader/cif/schema/mmcif.d.ts +30 -26
  258. package/lib/mol-io/reader/cif/schema/mmcif.js +44 -39
  259. package/lib/mol-io/reader/cif/schema.d.ts +1 -1
  260. package/lib/mol-io/reader/cif/schema.js +22 -2
  261. package/lib/mol-io/writer/ligand-encoder.d.ts +4 -2
  262. package/lib/mol-io/writer/ligand-encoder.js +9 -4
  263. package/lib/mol-io/writer/mol/encoder.js +17 -5
  264. package/lib/mol-io/writer/mol2/encoder.js +17 -4
  265. package/lib/mol-model/structure/model/model.js +14 -6
  266. package/lib/mol-model/structure/model/properties/common.js +1 -1
  267. package/lib/mol-model/structure/model/types.d.ts +19 -17
  268. package/lib/mol-model/structure/model/types.js +30 -31
  269. package/lib/mol-model/structure/query/queries/generators.js +1 -1
  270. package/lib/mol-model/structure/structure/properties.d.ts +1 -1
  271. package/lib/mol-model/structure/structure/unit/bonds/inter-compute.js +2 -4
  272. package/lib/mol-model/structure/structure/unit/bonds/intra-compute.js +1 -3
  273. package/lib/mol-model/structure/structure/unit/rings.js +3 -0
  274. package/lib/mol-model-formats/shape/ply.d.ts +2 -0
  275. package/lib/mol-model-formats/structure/basic/entities.js +1 -1
  276. package/lib/mol-model-formats/structure/basic/schema.d.ts +2 -2
  277. package/lib/mol-model-formats/structure/common/component.d.ts +3 -3
  278. package/lib/mol-model-formats/structure/common/component.js +46 -46
  279. package/lib/mol-model-formats/structure/pdb/atom-site.d.ts +2 -2
  280. package/lib/mol-model-formats/structure/pdb/atom-site.js +72 -7
  281. package/lib/mol-model-formats/structure/pdb/secondary-structure.js +11 -11
  282. package/lib/mol-model-formats/structure/pdb/to-cif.js +7 -2
  283. package/lib/mol-model-formats/structure/property/bonds/chem_comp.js +1 -1
  284. package/lib/mol-model-formats/structure/property/bonds/struct_conn.js +1 -1
  285. package/lib/mol-model-props/computed/representations/interactions-inter-unit-cylinder.d.ts +1 -0
  286. package/lib/mol-model-props/computed/representations/interactions-intra-unit-cylinder.d.ts +1 -0
  287. package/lib/mol-model-props/computed/representations/interactions.d.ts +3 -0
  288. package/lib/mol-model-props/integrative/cross-link-restraint/representation.d.ts +4 -0
  289. package/lib/mol-plugin/behavior/dynamic/volume-streaming/util.js +3 -2
  290. package/lib/mol-plugin/commands.d.ts +1 -0
  291. package/lib/mol-plugin/util/viewport-screenshot.d.ts +3 -0
  292. package/lib/mol-plugin/version.js +2 -2
  293. package/lib/mol-plugin-state/actions/structure.d.ts +6 -6
  294. package/lib/mol-plugin-state/helpers/structure-selection-query.d.ts +1 -1
  295. package/lib/mol-plugin-state/helpers/structure-selection-query.js +1 -1
  296. package/lib/mol-plugin-state/transforms/representation.d.ts +6 -0
  297. package/lib/mol-plugin-ui/base.d.ts +3 -1
  298. package/lib/mol-plugin-ui/controls/color.d.ts +1 -1
  299. package/lib/mol-plugin-ui/controls/common.d.ts +2 -0
  300. package/lib/mol-plugin-ui/hooks/use-behavior.d.ts +1 -1
  301. package/lib/mol-plugin-ui/hooks/use-behavior.js +20 -7
  302. package/lib/mol-plugin-ui/plugin.d.ts +2 -0
  303. package/lib/mol-plugin-ui/plugin.js +2 -2
  304. package/lib/mol-plugin-ui/react18.d.ts +11 -0
  305. package/lib/mol-plugin-ui/react18.js +34 -0
  306. package/lib/mol-plugin-ui/spec.d.ts +1 -0
  307. package/lib/mol-plugin-ui/state/common.js +7 -8
  308. package/lib/mol-plugin-ui/structure/focus.d.ts +1 -1
  309. package/lib/mol-plugin-ui/structure/focus.js +2 -2
  310. package/lib/mol-plugin-ui/task.d.ts +2 -21
  311. package/lib/mol-plugin-ui/task.js +40 -46
  312. package/lib/mol-plugin-ui/viewport/help.d.ts +4 -1
  313. package/lib/mol-repr/shape/loci/angle.d.ts +1 -0
  314. package/lib/mol-repr/shape/loci/dihedral.d.ts +1 -0
  315. package/lib/mol-repr/shape/loci/orientation.d.ts +1 -0
  316. package/lib/mol-repr/shape/loci/plane.d.ts +1 -0
  317. package/lib/mol-repr/shape/model/unitcell.d.ts +1 -0
  318. package/lib/mol-repr/structure/complex-visual.d.ts +3 -0
  319. package/lib/mol-repr/structure/params.d.ts +4 -0
  320. package/lib/mol-repr/structure/registry.d.ts +10 -0
  321. package/lib/mol-repr/structure/representation/backbone.d.ts +3 -0
  322. package/lib/mol-repr/structure/representation/ball-and-stick.d.ts +3 -0
  323. package/lib/mol-repr/structure/representation/carbohydrate.d.ts +3 -0
  324. package/lib/mol-repr/structure/representation/cartoon.d.ts +3 -0
  325. package/lib/mol-repr/structure/representation/ellipsoid.d.ts +3 -0
  326. package/lib/mol-repr/structure/representation/gaussian-surface.d.ts +3 -0
  327. package/lib/mol-repr/structure/representation/molecular-surface.d.ts +3 -0
  328. package/lib/mol-repr/structure/representation/orientation.d.ts +3 -0
  329. package/lib/mol-repr/structure/representation/putty.d.ts +3 -0
  330. package/lib/mol-repr/structure/representation/spacefill.d.ts +3 -0
  331. package/lib/mol-repr/structure/units-visual.d.ts +4 -0
  332. package/lib/mol-repr/structure/visual/bond-inter-unit-cylinder.d.ts +2 -0
  333. package/lib/mol-repr/structure/visual/bond-intra-unit-cylinder.d.ts +2 -0
  334. package/lib/mol-repr/structure/visual/carbohydrate-link-cylinder.d.ts +1 -0
  335. package/lib/mol-repr/structure/visual/carbohydrate-symbol-mesh.d.ts +1 -0
  336. package/lib/mol-repr/structure/visual/carbohydrate-terminal-link-cylinder.d.ts +1 -0
  337. package/lib/mol-repr/structure/visual/element-sphere.d.ts +2 -0
  338. package/lib/mol-repr/structure/visual/ellipsoid-mesh.d.ts +1 -0
  339. package/lib/mol-repr/structure/visual/gaussian-surface-mesh.d.ts +4 -0
  340. package/lib/mol-repr/structure/visual/molecular-surface-mesh.d.ts +1 -0
  341. package/lib/mol-repr/structure/visual/nucleotide-block-mesh.d.ts +1 -0
  342. package/lib/mol-repr/structure/visual/nucleotide-ring-mesh.d.ts +1 -0
  343. package/lib/mol-repr/structure/visual/orientation-ellipsoid-mesh.d.ts +1 -0
  344. package/lib/mol-repr/structure/visual/polymer-backbone-cylinder.d.ts +2 -0
  345. package/lib/mol-repr/structure/visual/polymer-backbone-sphere.d.ts +2 -0
  346. package/lib/mol-repr/structure/visual/polymer-direction-wedge.d.ts +1 -0
  347. package/lib/mol-repr/structure/visual/polymer-gap-cylinder.d.ts +1 -0
  348. package/lib/mol-repr/structure/visual/polymer-trace-mesh.d.ts +1 -0
  349. package/lib/mol-repr/structure/visual/polymer-tube-mesh.d.ts +1 -0
  350. package/lib/mol-repr/util.d.ts +2 -1
  351. package/lib/mol-repr/util.js +2 -2
  352. package/lib/mol-repr/volume/isosurface.d.ts +5 -0
  353. package/lib/mol-repr/volume/registry.d.ts +1 -0
  354. package/lib/mol-theme/color.d.ts +9 -2
  355. package/lib/mol-theme/color.js +1 -1
  356. package/lib/servers/model/server/query.js +1 -3
  357. package/lib/servers/model/version.d.ts +1 -1
  358. package/lib/servers/model/version.js +1 -1
  359. package/package.json +21 -19

There are too many changes on this page to be displayed.


The amount of changes on this page would crash your brower.

You can still verify the content by downloading the package file manually.