molstar 3.5.0 → 3.6.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (284) hide show
  1. package/build/viewer/index.html +1 -1
  2. package/build/viewer/molstar.js +1 -1
  3. package/build/viewer/molstar.js.LICENSE.txt +12 -14
  4. package/lib/apps/docking-viewer/index.js +1 -1
  5. package/lib/apps/viewer/app.js +1 -1
  6. package/lib/apps/viewer/index.html +1 -1
  7. package/lib/cli/chem-comp-dict/util.d.ts +20 -20
  8. package/lib/cli/cifschema/util/cif-dic.d.ts +1 -1
  9. package/lib/cli/cifschema/util/cif-dic.js +7 -5
  10. package/lib/cli/cifschema/util/generate.d.ts +1 -1
  11. package/lib/cli/cifschema/util/generate.js +12 -3
  12. package/lib/cli/cifschema/util/schema.d.ts +3 -3
  13. package/lib/cli/cifschema/util/schema.js +1 -1
  14. package/lib/commonjs/apps/docking-viewer/index.js +2 -2
  15. package/lib/commonjs/apps/viewer/app.js +2 -2
  16. package/lib/commonjs/cli/chem-comp-dict/util.d.ts +20 -20
  17. package/lib/commonjs/cli/cifschema/util/cif-dic.d.ts +1 -1
  18. package/lib/commonjs/cli/cifschema/util/cif-dic.js +7 -5
  19. package/lib/commonjs/cli/cifschema/util/generate.d.ts +1 -1
  20. package/lib/commonjs/cli/cifschema/util/generate.js +12 -3
  21. package/lib/commonjs/cli/cifschema/util/schema.d.ts +3 -3
  22. package/lib/commonjs/cli/cifschema/util/schema.js +1 -1
  23. package/lib/commonjs/examples/alpha-orbitals/index.js +2 -2
  24. package/lib/commonjs/examples/basic-wrapper/index.js +2 -2
  25. package/lib/commonjs/examples/lighting/index.js +2 -2
  26. package/lib/commonjs/examples/proteopedia-wrapper/index.js +2 -2
  27. package/lib/commonjs/extensions/anvil/behavior.d.ts +1 -0
  28. package/lib/commonjs/extensions/anvil/representation.d.ts +4 -0
  29. package/lib/commonjs/extensions/cellpack/representation.d.ts +1 -0
  30. package/lib/commonjs/extensions/dnatco/confal-pyramids/representation.d.ts +3 -0
  31. package/lib/commonjs/extensions/rcsb/assembly-symmetry/behavior.d.ts +1 -0
  32. package/lib/commonjs/extensions/rcsb/assembly-symmetry/representation.d.ts +1 -0
  33. package/lib/commonjs/extensions/rcsb/validation-report/representation.d.ts +5 -0
  34. package/lib/commonjs/mol-canvas3d/canvas3d.d.ts +2 -0
  35. package/lib/commonjs/mol-canvas3d/helper/camera-helper.d.ts +1 -0
  36. package/lib/commonjs/mol-canvas3d/helper/handle-helper.d.ts +1 -0
  37. package/lib/commonjs/mol-canvas3d/helper/helper.d.ts +2 -0
  38. package/lib/commonjs/mol-canvas3d/passes/image.d.ts +1 -0
  39. package/lib/commonjs/mol-data/db/column.d.ts +10 -3
  40. package/lib/commonjs/mol-data/db/column.js +39 -17
  41. package/lib/commonjs/mol-geo/geometry/cylinders/cylinders.d.ts +4 -2
  42. package/lib/commonjs/mol-geo/geometry/cylinders/cylinders.js +2 -2
  43. package/lib/commonjs/mol-geo/geometry/mesh/mesh.d.ts +2 -1
  44. package/lib/commonjs/mol-geo/geometry/mesh/mesh.js +2 -2
  45. package/lib/commonjs/mol-geo/geometry/spheres/spheres.d.ts +2 -1
  46. package/lib/commonjs/mol-geo/geometry/spheres/spheres.js +2 -2
  47. package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.d.ts +2 -1
  48. package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.js +2 -2
  49. package/lib/commonjs/mol-gl/shader/chunks/wboit-write.glsl.d.ts +2 -2
  50. package/lib/commonjs/mol-gl/shader/chunks/wboit-write.glsl.js +2 -2
  51. package/lib/commonjs/mol-gl/shader/direct-volume.frag.d.ts +1 -1
  52. package/lib/commonjs/mol-gl/shader/direct-volume.frag.js +1 -1
  53. package/lib/commonjs/mol-gl/shader/image.frag.d.ts +2 -2
  54. package/lib/commonjs/mol-gl/shader/image.frag.js +2 -2
  55. package/lib/commonjs/mol-gl/shader/lines.frag.d.ts +2 -2
  56. package/lib/commonjs/mol-gl/shader/lines.frag.js +2 -2
  57. package/lib/commonjs/mol-gl/shader/points.frag.d.ts +2 -2
  58. package/lib/commonjs/mol-gl/shader/points.frag.js +2 -2
  59. package/lib/commonjs/mol-gl/shader/text.frag.d.ts +2 -2
  60. package/lib/commonjs/mol-gl/shader/text.frag.js +2 -2
  61. package/lib/commonjs/mol-gl/webgl/buffer.d.ts +2 -2
  62. package/lib/commonjs/mol-gl/webgl/buffer.js +12 -12
  63. package/lib/commonjs/mol-gl/webgl/program.d.ts +1 -1
  64. package/lib/commonjs/mol-gl/webgl/program.js +10 -4
  65. package/lib/commonjs/mol-io/reader/cif/schema/bird.d.ts +8 -8
  66. package/lib/commonjs/mol-io/reader/cif/schema/bird.js +12 -11
  67. package/lib/commonjs/mol-io/reader/cif/schema/ccd-extras.d.ts +1 -1
  68. package/lib/commonjs/mol-io/reader/cif/schema/ccd.d.ts +12 -12
  69. package/lib/commonjs/mol-io/reader/cif/schema/ccd.js +13 -12
  70. package/lib/commonjs/mol-io/reader/cif/schema/mmcif-extras.d.ts +5 -5
  71. package/lib/commonjs/mol-io/reader/cif/schema/mmcif-extras.js +2 -2
  72. package/lib/commonjs/mol-io/reader/cif/schema/mmcif.d.ts +30 -26
  73. package/lib/commonjs/mol-io/reader/cif/schema/mmcif.js +44 -39
  74. package/lib/commonjs/mol-io/reader/cif/schema.d.ts +1 -1
  75. package/lib/commonjs/mol-io/reader/cif/schema.js +22 -2
  76. package/lib/commonjs/mol-io/writer/mol/encoder.js +1 -1
  77. package/lib/commonjs/mol-model/structure/model/model.js +14 -6
  78. package/lib/commonjs/mol-model/structure/model/properties/common.js +1 -1
  79. package/lib/commonjs/mol-model/structure/model/types.d.ts +19 -17
  80. package/lib/commonjs/mol-model/structure/model/types.js +30 -31
  81. package/lib/commonjs/mol-model/structure/query/queries/generators.js +1 -1
  82. package/lib/commonjs/mol-model/structure/structure/properties.d.ts +1 -1
  83. package/lib/commonjs/mol-model/structure/structure/unit/bonds/inter-compute.js +2 -4
  84. package/lib/commonjs/mol-model/structure/structure/unit/bonds/intra-compute.js +1 -3
  85. package/lib/commonjs/mol-model/structure/structure/unit/rings.js +3 -0
  86. package/lib/commonjs/mol-model-formats/shape/ply.d.ts +2 -0
  87. package/lib/commonjs/mol-model-formats/structure/basic/entities.js +1 -1
  88. package/lib/commonjs/mol-model-formats/structure/basic/schema.d.ts +2 -2
  89. package/lib/commonjs/mol-model-formats/structure/common/component.d.ts +3 -3
  90. package/lib/commonjs/mol-model-formats/structure/common/component.js +46 -46
  91. package/lib/commonjs/mol-model-formats/structure/pdb/atom-site.d.ts +2 -2
  92. package/lib/commonjs/mol-model-formats/structure/pdb/atom-site.js +72 -7
  93. package/lib/commonjs/mol-model-formats/structure/pdb/secondary-structure.js +11 -11
  94. package/lib/commonjs/mol-model-formats/structure/pdb/to-cif.js +7 -2
  95. package/lib/commonjs/mol-model-formats/structure/property/bonds/chem_comp.js +1 -1
  96. package/lib/commonjs/mol-model-formats/structure/property/bonds/struct_conn.js +1 -1
  97. package/lib/commonjs/mol-model-props/computed/representations/interactions-inter-unit-cylinder.d.ts +1 -0
  98. package/lib/commonjs/mol-model-props/computed/representations/interactions-intra-unit-cylinder.d.ts +1 -0
  99. package/lib/commonjs/mol-model-props/computed/representations/interactions.d.ts +3 -0
  100. package/lib/commonjs/mol-model-props/integrative/cross-link-restraint/representation.d.ts +4 -0
  101. package/lib/commonjs/mol-plugin/behavior/dynamic/volume-streaming/util.js +3 -2
  102. package/lib/commonjs/mol-plugin/commands.d.ts +1 -0
  103. package/lib/commonjs/mol-plugin/util/viewport-screenshot.d.ts +3 -0
  104. package/lib/commonjs/mol-plugin-state/actions/structure.d.ts +6 -6
  105. package/lib/commonjs/mol-plugin-state/helpers/structure-selection-query.d.ts +1 -1
  106. package/lib/commonjs/mol-plugin-state/helpers/structure-selection-query.js +1 -1
  107. package/lib/commonjs/mol-plugin-state/transforms/representation.d.ts +6 -0
  108. package/lib/commonjs/mol-plugin-ui/react18.d.ts +11 -0
  109. package/lib/commonjs/mol-plugin-ui/react18.js +38 -0
  110. package/lib/commonjs/mol-plugin-ui/structure/focus.d.ts +1 -1
  111. package/lib/commonjs/mol-plugin-ui/structure/focus.js +2 -2
  112. package/lib/commonjs/mol-repr/shape/loci/angle.d.ts +1 -0
  113. package/lib/commonjs/mol-repr/shape/loci/dihedral.d.ts +1 -0
  114. package/lib/commonjs/mol-repr/shape/loci/orientation.d.ts +1 -0
  115. package/lib/commonjs/mol-repr/shape/loci/plane.d.ts +1 -0
  116. package/lib/commonjs/mol-repr/shape/model/unitcell.d.ts +1 -0
  117. package/lib/commonjs/mol-repr/structure/complex-visual.d.ts +3 -0
  118. package/lib/commonjs/mol-repr/structure/params.d.ts +4 -0
  119. package/lib/commonjs/mol-repr/structure/registry.d.ts +10 -0
  120. package/lib/commonjs/mol-repr/structure/representation/backbone.d.ts +3 -0
  121. package/lib/commonjs/mol-repr/structure/representation/ball-and-stick.d.ts +3 -0
  122. package/lib/commonjs/mol-repr/structure/representation/carbohydrate.d.ts +3 -0
  123. package/lib/commonjs/mol-repr/structure/representation/cartoon.d.ts +3 -0
  124. package/lib/commonjs/mol-repr/structure/representation/ellipsoid.d.ts +3 -0
  125. package/lib/commonjs/mol-repr/structure/representation/gaussian-surface.d.ts +3 -0
  126. package/lib/commonjs/mol-repr/structure/representation/molecular-surface.d.ts +3 -0
  127. package/lib/commonjs/mol-repr/structure/representation/orientation.d.ts +3 -0
  128. package/lib/commonjs/mol-repr/structure/representation/putty.d.ts +3 -0
  129. package/lib/commonjs/mol-repr/structure/representation/spacefill.d.ts +3 -0
  130. package/lib/commonjs/mol-repr/structure/units-visual.d.ts +4 -0
  131. package/lib/commonjs/mol-repr/structure/visual/bond-inter-unit-cylinder.d.ts +2 -0
  132. package/lib/commonjs/mol-repr/structure/visual/bond-intra-unit-cylinder.d.ts +2 -0
  133. package/lib/commonjs/mol-repr/structure/visual/carbohydrate-link-cylinder.d.ts +1 -0
  134. package/lib/commonjs/mol-repr/structure/visual/carbohydrate-symbol-mesh.d.ts +1 -0
  135. package/lib/commonjs/mol-repr/structure/visual/carbohydrate-terminal-link-cylinder.d.ts +1 -0
  136. package/lib/commonjs/mol-repr/structure/visual/element-sphere.d.ts +2 -0
  137. package/lib/commonjs/mol-repr/structure/visual/ellipsoid-mesh.d.ts +1 -0
  138. package/lib/commonjs/mol-repr/structure/visual/gaussian-surface-mesh.d.ts +4 -0
  139. package/lib/commonjs/mol-repr/structure/visual/molecular-surface-mesh.d.ts +1 -0
  140. package/lib/commonjs/mol-repr/structure/visual/nucleotide-block-mesh.d.ts +1 -0
  141. package/lib/commonjs/mol-repr/structure/visual/nucleotide-ring-mesh.d.ts +1 -0
  142. package/lib/commonjs/mol-repr/structure/visual/orientation-ellipsoid-mesh.d.ts +1 -0
  143. package/lib/commonjs/mol-repr/structure/visual/polymer-backbone-cylinder.d.ts +2 -0
  144. package/lib/commonjs/mol-repr/structure/visual/polymer-backbone-sphere.d.ts +2 -0
  145. package/lib/commonjs/mol-repr/structure/visual/polymer-direction-wedge.d.ts +1 -0
  146. package/lib/commonjs/mol-repr/structure/visual/polymer-gap-cylinder.d.ts +1 -0
  147. package/lib/commonjs/mol-repr/structure/visual/polymer-trace-mesh.d.ts +1 -0
  148. package/lib/commonjs/mol-repr/structure/visual/polymer-tube-mesh.d.ts +1 -0
  149. package/lib/commonjs/mol-repr/util.d.ts +2 -1
  150. package/lib/commonjs/mol-repr/util.js +2 -2
  151. package/lib/commonjs/mol-repr/volume/isosurface.d.ts +5 -0
  152. package/lib/commonjs/mol-repr/volume/registry.d.ts +1 -0
  153. package/lib/examples/alpha-orbitals/index.js +1 -1
  154. package/lib/examples/basic-wrapper/index.js +1 -1
  155. package/lib/examples/lighting/index.js +1 -1
  156. package/lib/examples/proteopedia-wrapper/index.js +1 -1
  157. package/lib/extensions/anvil/behavior.d.ts +1 -0
  158. package/lib/extensions/anvil/representation.d.ts +4 -0
  159. package/lib/extensions/cellpack/representation.d.ts +1 -0
  160. package/lib/extensions/dnatco/confal-pyramids/representation.d.ts +3 -0
  161. package/lib/extensions/rcsb/assembly-symmetry/behavior.d.ts +1 -0
  162. package/lib/extensions/rcsb/assembly-symmetry/representation.d.ts +1 -0
  163. package/lib/extensions/rcsb/validation-report/representation.d.ts +5 -0
  164. package/lib/mol-canvas3d/canvas3d.d.ts +2 -0
  165. package/lib/mol-canvas3d/helper/camera-helper.d.ts +1 -0
  166. package/lib/mol-canvas3d/helper/handle-helper.d.ts +1 -0
  167. package/lib/mol-canvas3d/helper/helper.d.ts +2 -0
  168. package/lib/mol-canvas3d/passes/image.d.ts +1 -0
  169. package/lib/mol-data/db/column.d.ts +10 -3
  170. package/lib/mol-data/db/column.js +39 -18
  171. package/lib/mol-geo/geometry/cylinders/cylinders.d.ts +4 -2
  172. package/lib/mol-geo/geometry/cylinders/cylinders.js +2 -2
  173. package/lib/mol-geo/geometry/mesh/mesh.d.ts +2 -1
  174. package/lib/mol-geo/geometry/mesh/mesh.js +2 -2
  175. package/lib/mol-geo/geometry/spheres/spheres.d.ts +2 -1
  176. package/lib/mol-geo/geometry/spheres/spheres.js +2 -2
  177. package/lib/mol-geo/geometry/texture-mesh/texture-mesh.d.ts +2 -1
  178. package/lib/mol-geo/geometry/texture-mesh/texture-mesh.js +2 -2
  179. package/lib/mol-gl/shader/chunks/wboit-write.glsl.d.ts +2 -2
  180. package/lib/mol-gl/shader/chunks/wboit-write.glsl.js +2 -2
  181. package/lib/mol-gl/shader/direct-volume.frag.d.ts +1 -1
  182. package/lib/mol-gl/shader/direct-volume.frag.js +1 -1
  183. package/lib/mol-gl/shader/image.frag.d.ts +2 -2
  184. package/lib/mol-gl/shader/image.frag.js +2 -2
  185. package/lib/mol-gl/shader/lines.frag.d.ts +2 -2
  186. package/lib/mol-gl/shader/lines.frag.js +2 -2
  187. package/lib/mol-gl/shader/points.frag.d.ts +2 -2
  188. package/lib/mol-gl/shader/points.frag.js +2 -2
  189. package/lib/mol-gl/shader/text.frag.d.ts +2 -2
  190. package/lib/mol-gl/shader/text.frag.js +2 -2
  191. package/lib/mol-gl/webgl/buffer.d.ts +2 -2
  192. package/lib/mol-gl/webgl/buffer.js +12 -12
  193. package/lib/mol-gl/webgl/program.d.ts +1 -1
  194. package/lib/mol-gl/webgl/program.js +10 -4
  195. package/lib/mol-io/reader/cif/schema/bird.d.ts +8 -8
  196. package/lib/mol-io/reader/cif/schema/bird.js +12 -11
  197. package/lib/mol-io/reader/cif/schema/ccd-extras.d.ts +1 -1
  198. package/lib/mol-io/reader/cif/schema/ccd.d.ts +12 -12
  199. package/lib/mol-io/reader/cif/schema/ccd.js +13 -12
  200. package/lib/mol-io/reader/cif/schema/mmcif-extras.d.ts +5 -5
  201. package/lib/mol-io/reader/cif/schema/mmcif-extras.js +2 -2
  202. package/lib/mol-io/reader/cif/schema/mmcif.d.ts +30 -26
  203. package/lib/mol-io/reader/cif/schema/mmcif.js +44 -39
  204. package/lib/mol-io/reader/cif/schema.d.ts +1 -1
  205. package/lib/mol-io/reader/cif/schema.js +22 -2
  206. package/lib/mol-io/writer/mol/encoder.js +1 -1
  207. package/lib/mol-model/structure/model/model.js +14 -6
  208. package/lib/mol-model/structure/model/properties/common.js +1 -1
  209. package/lib/mol-model/structure/model/types.d.ts +19 -17
  210. package/lib/mol-model/structure/model/types.js +30 -31
  211. package/lib/mol-model/structure/query/queries/generators.js +1 -1
  212. package/lib/mol-model/structure/structure/properties.d.ts +1 -1
  213. package/lib/mol-model/structure/structure/unit/bonds/inter-compute.js +2 -4
  214. package/lib/mol-model/structure/structure/unit/bonds/intra-compute.js +1 -3
  215. package/lib/mol-model/structure/structure/unit/rings.js +3 -0
  216. package/lib/mol-model-formats/shape/ply.d.ts +2 -0
  217. package/lib/mol-model-formats/structure/basic/entities.js +1 -1
  218. package/lib/mol-model-formats/structure/basic/schema.d.ts +2 -2
  219. package/lib/mol-model-formats/structure/common/component.d.ts +3 -3
  220. package/lib/mol-model-formats/structure/common/component.js +46 -46
  221. package/lib/mol-model-formats/structure/pdb/atom-site.d.ts +2 -2
  222. package/lib/mol-model-formats/structure/pdb/atom-site.js +72 -7
  223. package/lib/mol-model-formats/structure/pdb/secondary-structure.js +11 -11
  224. package/lib/mol-model-formats/structure/pdb/to-cif.js +7 -2
  225. package/lib/mol-model-formats/structure/property/bonds/chem_comp.js +1 -1
  226. package/lib/mol-model-formats/structure/property/bonds/struct_conn.js +1 -1
  227. package/lib/mol-model-props/computed/representations/interactions-inter-unit-cylinder.d.ts +1 -0
  228. package/lib/mol-model-props/computed/representations/interactions-intra-unit-cylinder.d.ts +1 -0
  229. package/lib/mol-model-props/computed/representations/interactions.d.ts +3 -0
  230. package/lib/mol-model-props/integrative/cross-link-restraint/representation.d.ts +4 -0
  231. package/lib/mol-plugin/behavior/dynamic/volume-streaming/util.js +3 -2
  232. package/lib/mol-plugin/commands.d.ts +1 -0
  233. package/lib/mol-plugin/util/viewport-screenshot.d.ts +3 -0
  234. package/lib/mol-plugin/version.js +2 -2
  235. package/lib/mol-plugin-state/actions/structure.d.ts +6 -6
  236. package/lib/mol-plugin-state/helpers/structure-selection-query.d.ts +1 -1
  237. package/lib/mol-plugin-state/helpers/structure-selection-query.js +1 -1
  238. package/lib/mol-plugin-state/transforms/representation.d.ts +6 -0
  239. package/lib/mol-plugin-ui/react18.d.ts +11 -0
  240. package/lib/mol-plugin-ui/react18.js +34 -0
  241. package/lib/mol-plugin-ui/structure/focus.d.ts +1 -1
  242. package/lib/mol-plugin-ui/structure/focus.js +2 -2
  243. package/lib/mol-repr/shape/loci/angle.d.ts +1 -0
  244. package/lib/mol-repr/shape/loci/dihedral.d.ts +1 -0
  245. package/lib/mol-repr/shape/loci/orientation.d.ts +1 -0
  246. package/lib/mol-repr/shape/loci/plane.d.ts +1 -0
  247. package/lib/mol-repr/shape/model/unitcell.d.ts +1 -0
  248. package/lib/mol-repr/structure/complex-visual.d.ts +3 -0
  249. package/lib/mol-repr/structure/params.d.ts +4 -0
  250. package/lib/mol-repr/structure/registry.d.ts +10 -0
  251. package/lib/mol-repr/structure/representation/backbone.d.ts +3 -0
  252. package/lib/mol-repr/structure/representation/ball-and-stick.d.ts +3 -0
  253. package/lib/mol-repr/structure/representation/carbohydrate.d.ts +3 -0
  254. package/lib/mol-repr/structure/representation/cartoon.d.ts +3 -0
  255. package/lib/mol-repr/structure/representation/ellipsoid.d.ts +3 -0
  256. package/lib/mol-repr/structure/representation/gaussian-surface.d.ts +3 -0
  257. package/lib/mol-repr/structure/representation/molecular-surface.d.ts +3 -0
  258. package/lib/mol-repr/structure/representation/orientation.d.ts +3 -0
  259. package/lib/mol-repr/structure/representation/putty.d.ts +3 -0
  260. package/lib/mol-repr/structure/representation/spacefill.d.ts +3 -0
  261. package/lib/mol-repr/structure/units-visual.d.ts +4 -0
  262. package/lib/mol-repr/structure/visual/bond-inter-unit-cylinder.d.ts +2 -0
  263. package/lib/mol-repr/structure/visual/bond-intra-unit-cylinder.d.ts +2 -0
  264. package/lib/mol-repr/structure/visual/carbohydrate-link-cylinder.d.ts +1 -0
  265. package/lib/mol-repr/structure/visual/carbohydrate-symbol-mesh.d.ts +1 -0
  266. package/lib/mol-repr/structure/visual/carbohydrate-terminal-link-cylinder.d.ts +1 -0
  267. package/lib/mol-repr/structure/visual/element-sphere.d.ts +2 -0
  268. package/lib/mol-repr/structure/visual/ellipsoid-mesh.d.ts +1 -0
  269. package/lib/mol-repr/structure/visual/gaussian-surface-mesh.d.ts +4 -0
  270. package/lib/mol-repr/structure/visual/molecular-surface-mesh.d.ts +1 -0
  271. package/lib/mol-repr/structure/visual/nucleotide-block-mesh.d.ts +1 -0
  272. package/lib/mol-repr/structure/visual/nucleotide-ring-mesh.d.ts +1 -0
  273. package/lib/mol-repr/structure/visual/orientation-ellipsoid-mesh.d.ts +1 -0
  274. package/lib/mol-repr/structure/visual/polymer-backbone-cylinder.d.ts +2 -0
  275. package/lib/mol-repr/structure/visual/polymer-backbone-sphere.d.ts +2 -0
  276. package/lib/mol-repr/structure/visual/polymer-direction-wedge.d.ts +1 -0
  277. package/lib/mol-repr/structure/visual/polymer-gap-cylinder.d.ts +1 -0
  278. package/lib/mol-repr/structure/visual/polymer-trace-mesh.d.ts +1 -0
  279. package/lib/mol-repr/structure/visual/polymer-tube-mesh.d.ts +1 -0
  280. package/lib/mol-repr/util.d.ts +2 -1
  281. package/lib/mol-repr/util.js +2 -2
  282. package/lib/mol-repr/volume/isosurface.d.ts +5 -0
  283. package/lib/mol-repr/volume/registry.d.ts +1 -0
  284. package/package.json +8 -6
@@ -22,6 +22,7 @@ export declare namespace StructureRepresentationRegistry {
22
22
  flatShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
23
23
  ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
24
24
  xrayShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
25
+ allowTransparentBackfaces: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
25
26
  bumpAmplitude: import("../../mol-util/param-definition").ParamDefinition.Numeric;
26
27
  alpha: import("../../mol-util/param-definition").ParamDefinition.Numeric;
27
28
  quality: import("../../mol-util/param-definition").ParamDefinition.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -61,6 +62,7 @@ export declare namespace StructureRepresentationRegistry {
61
62
  flatShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
62
63
  ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
63
64
  xrayShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
65
+ allowTransparentBackfaces: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
64
66
  bumpAmplitude: import("../../mol-util/param-definition").ParamDefinition.Numeric;
65
67
  alpha: import("../../mol-util/param-definition").ParamDefinition.Numeric;
66
68
  quality: import("../../mol-util/param-definition").ParamDefinition.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -110,6 +112,7 @@ export declare namespace StructureRepresentationRegistry {
110
112
  doubleSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
111
113
  ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
112
114
  xrayShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
115
+ allowTransparentBackfaces: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
113
116
  bumpAmplitude: import("../../mol-util/param-definition").ParamDefinition.Numeric;
114
117
  alpha: import("../../mol-util/param-definition").ParamDefinition.Numeric;
115
118
  quality: import("../../mol-util/param-definition").ParamDefinition.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -155,6 +158,7 @@ export declare namespace StructureRepresentationRegistry {
155
158
  flatShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
156
159
  ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
157
160
  xrayShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
161
+ allowTransparentBackfaces: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
158
162
  bumpAmplitude: import("../../mol-util/param-definition").ParamDefinition.Numeric;
159
163
  alpha: import("../../mol-util/param-definition").ParamDefinition.Numeric;
160
164
  quality: import("../../mol-util/param-definition").ParamDefinition.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -205,6 +209,7 @@ export declare namespace StructureRepresentationRegistry {
205
209
  doubleSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
206
210
  ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
207
211
  xrayShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
212
+ allowTransparentBackfaces: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
208
213
  bumpAmplitude: import("../../mol-util/param-definition").ParamDefinition.Numeric;
209
214
  alpha: import("../../mol-util/param-definition").ParamDefinition.Numeric;
210
215
  quality: import("../../mol-util/param-definition").ParamDefinition.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -266,6 +271,7 @@ export declare namespace StructureRepresentationRegistry {
266
271
  flatShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
267
272
  ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
268
273
  xrayShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
274
+ allowTransparentBackfaces: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
269
275
  bumpAmplitude: import("../../mol-util/param-definition").ParamDefinition.Numeric;
270
276
  }, "gaussian-surface">;
271
277
  'gaussian-volume': import("./representation").StructureRepresentationProvider<{
@@ -421,6 +427,7 @@ export declare namespace StructureRepresentationRegistry {
421
427
  flatShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
422
428
  ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
423
429
  xrayShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
430
+ allowTransparentBackfaces: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
424
431
  bumpAmplitude: import("../../mol-util/param-definition").ParamDefinition.Numeric;
425
432
  }, "molecular-surface">;
426
433
  orientation: import("./representation").StructureRepresentationProvider<{
@@ -435,6 +442,7 @@ export declare namespace StructureRepresentationRegistry {
435
442
  flatShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
436
443
  ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
437
444
  xrayShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
445
+ allowTransparentBackfaces: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
438
446
  bumpAmplitude: import("../../mol-util/param-definition").ParamDefinition.Numeric;
439
447
  alpha: import("../../mol-util/param-definition").ParamDefinition.Numeric;
440
448
  quality: import("../../mol-util/param-definition").ParamDefinition.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -492,6 +500,7 @@ export declare namespace StructureRepresentationRegistry {
492
500
  flatShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
493
501
  ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
494
502
  xrayShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
503
+ allowTransparentBackfaces: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
495
504
  bumpAmplitude: import("../../mol-util/param-definition").ParamDefinition.Numeric;
496
505
  alpha: import("../../mol-util/param-definition").ParamDefinition.Numeric;
497
506
  quality: import("../../mol-util/param-definition").ParamDefinition.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -525,6 +534,7 @@ export declare namespace StructureRepresentationRegistry {
525
534
  doubleSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
526
535
  ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
527
536
  xrayShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
537
+ allowTransparentBackfaces: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
528
538
  bumpAmplitude: import("../../mol-util/param-definition").ParamDefinition.Numeric;
529
539
  alpha: import("../../mol-util/param-definition").ParamDefinition.Numeric;
530
540
  quality: import("../../mol-util/param-definition").ParamDefinition.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -21,6 +21,7 @@ export declare const BackboneParams: {
21
21
  flatShaded: PD.BooleanParam;
22
22
  ignoreLight: PD.BooleanParam;
23
23
  xrayShaded: PD.BooleanParam;
24
+ allowTransparentBackfaces: PD.BooleanParam;
24
25
  bumpAmplitude: PD.Numeric;
25
26
  alpha: PD.Numeric;
26
27
  quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -56,6 +57,7 @@ export declare function getBackboneParams(ctx: ThemeRegistryContext, structure:
56
57
  flatShaded: PD.BooleanParam;
57
58
  ignoreLight: PD.BooleanParam;
58
59
  xrayShaded: PD.BooleanParam;
60
+ allowTransparentBackfaces: PD.BooleanParam;
59
61
  bumpAmplitude: PD.Numeric;
60
62
  alpha: PD.Numeric;
61
63
  quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -92,6 +94,7 @@ export declare const BackboneRepresentationProvider: StructureRepresentationProv
92
94
  flatShaded: PD.BooleanParam;
93
95
  ignoreLight: PD.BooleanParam;
94
96
  xrayShaded: PD.BooleanParam;
97
+ allowTransparentBackfaces: PD.BooleanParam;
95
98
  bumpAmplitude: PD.Numeric;
96
99
  alpha: PD.Numeric;
97
100
  quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -36,6 +36,7 @@ export declare const BallAndStickParams: {
36
36
  doubleSided: PD.BooleanParam;
37
37
  ignoreLight: PD.BooleanParam;
38
38
  xrayShaded: PD.BooleanParam;
39
+ allowTransparentBackfaces: PD.BooleanParam;
39
40
  bumpAmplitude: PD.Numeric;
40
41
  alpha: PD.Numeric;
41
42
  quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -88,6 +89,7 @@ export declare function getBallAndStickParams(ctx: ThemeRegistryContext, structu
88
89
  doubleSided: PD.BooleanParam;
89
90
  ignoreLight: PD.BooleanParam;
90
91
  xrayShaded: PD.BooleanParam;
92
+ allowTransparentBackfaces: PD.BooleanParam;
91
93
  bumpAmplitude: PD.Numeric;
92
94
  alpha: PD.Numeric;
93
95
  quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -141,6 +143,7 @@ export declare const BallAndStickRepresentationProvider: StructureRepresentation
141
143
  doubleSided: PD.BooleanParam;
142
144
  ignoreLight: PD.BooleanParam;
143
145
  xrayShaded: PD.BooleanParam;
146
+ allowTransparentBackfaces: PD.BooleanParam;
144
147
  bumpAmplitude: PD.Numeric;
145
148
  alpha: PD.Numeric;
146
149
  quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -30,6 +30,7 @@ export declare const CarbohydrateParams: {
30
30
  flatShaded: PD.BooleanParam;
31
31
  ignoreLight: PD.BooleanParam;
32
32
  xrayShaded: PD.BooleanParam;
33
+ allowTransparentBackfaces: PD.BooleanParam;
33
34
  bumpAmplitude: PD.Numeric;
34
35
  alpha: PD.Numeric;
35
36
  quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -75,6 +76,7 @@ export declare function getCarbohydrateParams(ctx: ThemeRegistryContext, structu
75
76
  flatShaded: PD.BooleanParam;
76
77
  ignoreLight: PD.BooleanParam;
77
78
  xrayShaded: PD.BooleanParam;
79
+ allowTransparentBackfaces: PD.BooleanParam;
78
80
  bumpAmplitude: PD.Numeric;
79
81
  alpha: PD.Numeric;
80
82
  quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -121,6 +123,7 @@ export declare const CarbohydrateRepresentationProvider: StructureRepresentation
121
123
  flatShaded: PD.BooleanParam;
122
124
  ignoreLight: PD.BooleanParam;
123
125
  xrayShaded: PD.BooleanParam;
126
+ allowTransparentBackfaces: PD.BooleanParam;
124
127
  bumpAmplitude: PD.Numeric;
125
128
  alpha: PD.Numeric;
126
129
  quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -19,6 +19,7 @@ export declare const CartoonParams: {
19
19
  flatShaded: PD.BooleanParam;
20
20
  ignoreLight: PD.BooleanParam;
21
21
  xrayShaded: PD.BooleanParam;
22
+ allowTransparentBackfaces: PD.BooleanParam;
22
23
  bumpAmplitude: PD.Numeric;
23
24
  alpha: PD.Numeric;
24
25
  quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -57,6 +58,7 @@ export declare function getCartoonParams(ctx: ThemeRegistryContext, structure: S
57
58
  flatShaded: PD.BooleanParam;
58
59
  ignoreLight: PD.BooleanParam;
59
60
  xrayShaded: PD.BooleanParam;
61
+ allowTransparentBackfaces: PD.BooleanParam;
60
62
  bumpAmplitude: PD.Numeric;
61
63
  alpha: PD.Numeric;
62
64
  quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -96,6 +98,7 @@ export declare const CartoonRepresentationProvider: StructureRepresentationProvi
96
98
  flatShaded: PD.BooleanParam;
97
99
  ignoreLight: PD.BooleanParam;
98
100
  xrayShaded: PD.BooleanParam;
101
+ allowTransparentBackfaces: PD.BooleanParam;
99
102
  bumpAmplitude: PD.Numeric;
100
103
  alpha: PD.Numeric;
101
104
  quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -36,6 +36,7 @@ export declare const EllipsoidParams: {
36
36
  doubleSided: PD.BooleanParam;
37
37
  ignoreLight: PD.BooleanParam;
38
38
  xrayShaded: PD.BooleanParam;
39
+ allowTransparentBackfaces: PD.BooleanParam;
39
40
  bumpAmplitude: PD.Numeric;
40
41
  alpha: PD.Numeric;
41
42
  quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -87,6 +88,7 @@ export declare function getEllipsoidParams(ctx: ThemeRegistryContext, structure:
87
88
  doubleSided: PD.BooleanParam;
88
89
  ignoreLight: PD.BooleanParam;
89
90
  xrayShaded: PD.BooleanParam;
91
+ allowTransparentBackfaces: PD.BooleanParam;
90
92
  bumpAmplitude: PD.Numeric;
91
93
  alpha: PD.Numeric;
92
94
  quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -139,6 +141,7 @@ export declare const EllipsoidRepresentationProvider: StructureRepresentationPro
139
141
  doubleSided: PD.BooleanParam;
140
142
  ignoreLight: PD.BooleanParam;
141
143
  xrayShaded: PD.BooleanParam;
144
+ allowTransparentBackfaces: PD.BooleanParam;
142
145
  bumpAmplitude: PD.Numeric;
143
146
  alpha: PD.Numeric;
144
147
  quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -47,6 +47,7 @@ export declare const GaussianSurfaceParams: {
47
47
  flatShaded: PD.BooleanParam;
48
48
  ignoreLight: PD.BooleanParam;
49
49
  xrayShaded: PD.BooleanParam;
50
+ allowTransparentBackfaces: PD.BooleanParam;
50
51
  bumpAmplitude: PD.Numeric;
51
52
  };
52
53
  export declare type GaussianSurfaceParams = typeof GaussianSurfaceParams;
@@ -89,6 +90,7 @@ export declare function getGaussianSurfaceParams(ctx: ThemeRegistryContext, stru
89
90
  flatShaded: PD.BooleanParam;
90
91
  ignoreLight: PD.BooleanParam;
91
92
  xrayShaded: PD.BooleanParam;
93
+ allowTransparentBackfaces: PD.BooleanParam;
92
94
  bumpAmplitude: PD.Numeric;
93
95
  };
94
96
  export declare type GaussianSurfaceRepresentation = StructureRepresentation<GaussianSurfaceParams>;
@@ -132,5 +134,6 @@ export declare const GaussianSurfaceRepresentationProvider: StructureRepresentat
132
134
  flatShaded: PD.BooleanParam;
133
135
  ignoreLight: PD.BooleanParam;
134
136
  xrayShaded: PD.BooleanParam;
137
+ allowTransparentBackfaces: PD.BooleanParam;
135
138
  bumpAmplitude: PD.Numeric;
136
139
  }, "gaussian-surface">;
@@ -46,6 +46,7 @@ export declare const MolecularSurfaceParams: {
46
46
  flatShaded: PD.BooleanParam;
47
47
  ignoreLight: PD.BooleanParam;
48
48
  xrayShaded: PD.BooleanParam;
49
+ allowTransparentBackfaces: PD.BooleanParam;
49
50
  bumpAmplitude: PD.Numeric;
50
51
  };
51
52
  export declare type MolecularSurfaceParams = typeof MolecularSurfaceParams;
@@ -87,6 +88,7 @@ export declare function getMolecularSurfaceParams(ctx: ThemeRegistryContext, str
87
88
  flatShaded: PD.BooleanParam;
88
89
  ignoreLight: PD.BooleanParam;
89
90
  xrayShaded: PD.BooleanParam;
91
+ allowTransparentBackfaces: PD.BooleanParam;
90
92
  bumpAmplitude: PD.Numeric;
91
93
  };
92
94
  export declare type MolecularSurfaceRepresentation = StructureRepresentation<MolecularSurfaceParams>;
@@ -129,5 +131,6 @@ export declare const MolecularSurfaceRepresentationProvider: StructureRepresenta
129
131
  flatShaded: PD.BooleanParam;
130
132
  ignoreLight: PD.BooleanParam;
131
133
  xrayShaded: PD.BooleanParam;
134
+ allowTransparentBackfaces: PD.BooleanParam;
132
135
  bumpAmplitude: PD.Numeric;
133
136
  }, "molecular-surface">;
@@ -20,6 +20,7 @@ export declare const OrientationParams: {
20
20
  flatShaded: PD.BooleanParam;
21
21
  ignoreLight: PD.BooleanParam;
22
22
  xrayShaded: PD.BooleanParam;
23
+ allowTransparentBackfaces: PD.BooleanParam;
23
24
  bumpAmplitude: PD.Numeric;
24
25
  alpha: PD.Numeric;
25
26
  quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -52,6 +53,7 @@ export declare function getOrientationParams(ctx: ThemeRegistryContext, structur
52
53
  flatShaded: PD.BooleanParam;
53
54
  ignoreLight: PD.BooleanParam;
54
55
  xrayShaded: PD.BooleanParam;
56
+ allowTransparentBackfaces: PD.BooleanParam;
55
57
  bumpAmplitude: PD.Numeric;
56
58
  alpha: PD.Numeric;
57
59
  quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -85,6 +87,7 @@ export declare const OrientationRepresentationProvider: StructureRepresentationP
85
87
  flatShaded: PD.BooleanParam;
86
88
  ignoreLight: PD.BooleanParam;
87
89
  xrayShaded: PD.BooleanParam;
90
+ allowTransparentBackfaces: PD.BooleanParam;
88
91
  bumpAmplitude: PD.Numeric;
89
92
  alpha: PD.Numeric;
90
93
  quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -20,6 +20,7 @@ export declare const PuttyParams: {
20
20
  flatShaded: PD.BooleanParam;
21
21
  ignoreLight: PD.BooleanParam;
22
22
  xrayShaded: PD.BooleanParam;
23
+ allowTransparentBackfaces: PD.BooleanParam;
23
24
  bumpAmplitude: PD.Numeric;
24
25
  alpha: PD.Numeric;
25
26
  quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -54,6 +55,7 @@ export declare function getPuttyParams(ctx: ThemeRegistryContext, structure: Str
54
55
  flatShaded: PD.BooleanParam;
55
56
  ignoreLight: PD.BooleanParam;
56
57
  xrayShaded: PD.BooleanParam;
58
+ allowTransparentBackfaces: PD.BooleanParam;
57
59
  bumpAmplitude: PD.Numeric;
58
60
  alpha: PD.Numeric;
59
61
  quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -89,6 +91,7 @@ export declare const PuttyRepresentationProvider: StructureRepresentationProvide
89
91
  flatShaded: PD.BooleanParam;
90
92
  ignoreLight: PD.BooleanParam;
91
93
  xrayShaded: PD.BooleanParam;
94
+ allowTransparentBackfaces: PD.BooleanParam;
92
95
  bumpAmplitude: PD.Numeric;
93
96
  alpha: PD.Numeric;
94
97
  quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -20,6 +20,7 @@ export declare const SpacefillParams: {
20
20
  doubleSided: PD.BooleanParam;
21
21
  ignoreLight: PD.BooleanParam;
22
22
  xrayShaded: PD.BooleanParam;
23
+ allowTransparentBackfaces: PD.BooleanParam;
23
24
  bumpAmplitude: PD.Numeric;
24
25
  alpha: PD.Numeric;
25
26
  quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -54,6 +55,7 @@ export declare function getSpacefillParams(ctx: ThemeRegistryContext, structure:
54
55
  doubleSided: PD.BooleanParam;
55
56
  ignoreLight: PD.BooleanParam;
56
57
  xrayShaded: PD.BooleanParam;
58
+ allowTransparentBackfaces: PD.BooleanParam;
57
59
  bumpAmplitude: PD.Numeric;
58
60
  alpha: PD.Numeric;
59
61
  quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -89,6 +91,7 @@ export declare const SpacefillRepresentationProvider: StructureRepresentationPro
89
91
  doubleSided: PD.BooleanParam;
90
92
  ignoreLight: PD.BooleanParam;
91
93
  xrayShaded: PD.BooleanParam;
94
+ allowTransparentBackfaces: PD.BooleanParam;
92
95
  bumpAmplitude: PD.Numeric;
93
96
  alpha: PD.Numeric;
94
97
  quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -51,6 +51,7 @@ export declare const UnitsMeshParams: {
51
51
  flatShaded: PD.BooleanParam;
52
52
  ignoreLight: PD.BooleanParam;
53
53
  xrayShaded: PD.BooleanParam;
54
+ allowTransparentBackfaces: PD.BooleanParam;
54
55
  bumpFrequency: PD.Numeric;
55
56
  bumpAmplitude: PD.Numeric;
56
57
  alpha: PD.Numeric;
@@ -82,6 +83,7 @@ export declare const UnitsSpheresParams: {
82
83
  doubleSided: PD.BooleanParam;
83
84
  ignoreLight: PD.BooleanParam;
84
85
  xrayShaded: PD.BooleanParam;
86
+ allowTransparentBackfaces: PD.BooleanParam;
85
87
  bumpFrequency: PD.Numeric;
86
88
  bumpAmplitude: PD.Numeric;
87
89
  alpha: PD.Numeric;
@@ -114,6 +116,7 @@ export declare const UnitsCylindersParams: {
114
116
  doubleSided: PD.BooleanParam;
115
117
  ignoreLight: PD.BooleanParam;
116
118
  xrayShaded: PD.BooleanParam;
119
+ allowTransparentBackfaces: PD.BooleanParam;
117
120
  bumpFrequency: PD.Numeric;
118
121
  bumpAmplitude: PD.Numeric;
119
122
  alpha: PD.Numeric;
@@ -275,6 +278,7 @@ export declare const UnitsTextureMeshParams: {
275
278
  flatShaded: PD.BooleanParam;
276
279
  ignoreLight: PD.BooleanParam;
277
280
  xrayShaded: PD.BooleanParam;
281
+ allowTransparentBackfaces: PD.BooleanParam;
278
282
  bumpFrequency: PD.Numeric;
279
283
  bumpAmplitude: PD.Numeric;
280
284
  alpha: PD.Numeric;
@@ -33,6 +33,7 @@ export declare const InterUnitBondCylinderParams: {
33
33
  doubleSided: PD.BooleanParam;
34
34
  ignoreLight: PD.BooleanParam;
35
35
  xrayShaded: PD.BooleanParam;
36
+ allowTransparentBackfaces: PD.BooleanParam;
36
37
  bumpFrequency: PD.Numeric;
37
38
  bumpAmplitude: PD.Numeric;
38
39
  alpha: PD.Numeric;
@@ -82,6 +83,7 @@ export declare function InterUnitBondCylinderVisual(materialId: number, structur
82
83
  doubleSided: PD.BooleanParam;
83
84
  ignoreLight: PD.BooleanParam;
84
85
  xrayShaded: PD.BooleanParam;
86
+ allowTransparentBackfaces: PD.BooleanParam;
85
87
  bumpFrequency: PD.Numeric;
86
88
  bumpAmplitude: PD.Numeric;
87
89
  alpha: PD.Numeric;
@@ -34,6 +34,7 @@ export declare const IntraUnitBondCylinderParams: {
34
34
  doubleSided: PD.BooleanParam;
35
35
  ignoreLight: PD.BooleanParam;
36
36
  xrayShaded: PD.BooleanParam;
37
+ allowTransparentBackfaces: PD.BooleanParam;
37
38
  bumpFrequency: PD.Numeric;
38
39
  bumpAmplitude: PD.Numeric;
39
40
  alpha: PD.Numeric;
@@ -83,6 +84,7 @@ export declare function IntraUnitBondCylinderVisual(materialId: number, structur
83
84
  doubleSided: PD.BooleanParam;
84
85
  ignoreLight: PD.BooleanParam;
85
86
  xrayShaded: PD.BooleanParam;
87
+ allowTransparentBackfaces: PD.BooleanParam;
86
88
  bumpFrequency: PD.Numeric;
87
89
  bumpAmplitude: PD.Numeric;
88
90
  alpha: PD.Numeric;
@@ -25,6 +25,7 @@ export declare const CarbohydrateLinkParams: {
25
25
  flatShaded: PD.BooleanParam;
26
26
  ignoreLight: PD.BooleanParam;
27
27
  xrayShaded: PD.BooleanParam;
28
+ allowTransparentBackfaces: PD.BooleanParam;
28
29
  bumpFrequency: PD.Numeric;
29
30
  bumpAmplitude: PD.Numeric;
30
31
  alpha: PD.Numeric;
@@ -15,6 +15,7 @@ export declare const CarbohydrateSymbolParams: {
15
15
  flatShaded: PD.BooleanParam;
16
16
  ignoreLight: PD.BooleanParam;
17
17
  xrayShaded: PD.BooleanParam;
18
+ allowTransparentBackfaces: PD.BooleanParam;
18
19
  bumpFrequency: PD.Numeric;
19
20
  bumpAmplitude: PD.Numeric;
20
21
  alpha: PD.Numeric;
@@ -25,6 +25,7 @@ export declare const CarbohydrateTerminalLinkParams: {
25
25
  flatShaded: PD.BooleanParam;
26
26
  ignoreLight: PD.BooleanParam;
27
27
  xrayShaded: PD.BooleanParam;
28
+ allowTransparentBackfaces: PD.BooleanParam;
28
29
  bumpFrequency: PD.Numeric;
29
30
  bumpAmplitude: PD.Numeric;
30
31
  alpha: PD.Numeric;
@@ -19,6 +19,7 @@ export declare const ElementSphereParams: {
19
19
  doubleSided: PD.BooleanParam;
20
20
  ignoreLight: PD.BooleanParam;
21
21
  xrayShaded: PD.BooleanParam;
22
+ allowTransparentBackfaces: PD.BooleanParam;
22
23
  bumpFrequency: PD.Numeric;
23
24
  bumpAmplitude: PD.Numeric;
24
25
  alpha: PD.Numeric;
@@ -53,6 +54,7 @@ export declare function ElementSphereVisual(materialId: number, structure: Struc
53
54
  doubleSided: PD.BooleanParam;
54
55
  ignoreLight: PD.BooleanParam;
55
56
  xrayShaded: PD.BooleanParam;
57
+ allowTransparentBackfaces: PD.BooleanParam;
56
58
  bumpFrequency: PD.Numeric;
57
59
  bumpAmplitude: PD.Numeric;
58
60
  alpha: PD.Numeric;
@@ -20,6 +20,7 @@ export declare const EllipsoidMeshParams: {
20
20
  flatShaded: PD.BooleanParam;
21
21
  ignoreLight: PD.BooleanParam;
22
22
  xrayShaded: PD.BooleanParam;
23
+ allowTransparentBackfaces: PD.BooleanParam;
23
24
  bumpFrequency: PD.Numeric;
24
25
  bumpAmplitude: PD.Numeric;
25
26
  alpha: PD.Numeric;
@@ -26,6 +26,7 @@ export declare const GaussianSurfaceMeshParams: {
26
26
  flatShaded: PD.BooleanParam;
27
27
  ignoreLight: PD.BooleanParam;
28
28
  xrayShaded: PD.BooleanParam;
29
+ allowTransparentBackfaces: PD.BooleanParam;
29
30
  bumpFrequency: PD.Numeric;
30
31
  bumpAmplitude: PD.Numeric;
31
32
  alpha: PD.Numeric;
@@ -65,6 +66,7 @@ export declare const StructureGaussianSurfaceMeshParams: {
65
66
  flatShaded: PD.BooleanParam;
66
67
  ignoreLight: PD.BooleanParam;
67
68
  xrayShaded: PD.BooleanParam;
69
+ allowTransparentBackfaces: PD.BooleanParam;
68
70
  bumpFrequency: PD.Numeric;
69
71
  bumpAmplitude: PD.Numeric;
70
72
  alpha: PD.Numeric;
@@ -104,6 +106,7 @@ export declare function GaussianSurfaceVisual(materialId: number, structure: Str
104
106
  flatShaded: PD.BooleanParam;
105
107
  ignoreLight: PD.BooleanParam;
106
108
  xrayShaded: PD.BooleanParam;
109
+ allowTransparentBackfaces: PD.BooleanParam;
107
110
  bumpFrequency: PD.Numeric;
108
111
  bumpAmplitude: PD.Numeric;
109
112
  alpha: PD.Numeric;
@@ -142,6 +145,7 @@ export declare function StructureGaussianSurfaceVisual(materialId: number, struc
142
145
  flatShaded: PD.BooleanParam;
143
146
  ignoreLight: PD.BooleanParam;
144
147
  xrayShaded: PD.BooleanParam;
148
+ allowTransparentBackfaces: PD.BooleanParam;
145
149
  bumpFrequency: PD.Numeric;
146
150
  bumpAmplitude: PD.Numeric;
147
151
  alpha: PD.Numeric;
@@ -22,6 +22,7 @@ export declare const MolecularSurfaceMeshParams: {
22
22
  flatShaded: PD.BooleanParam;
23
23
  ignoreLight: PD.BooleanParam;
24
24
  xrayShaded: PD.BooleanParam;
25
+ allowTransparentBackfaces: PD.BooleanParam;
25
26
  bumpFrequency: PD.Numeric;
26
27
  bumpAmplitude: PD.Numeric;
27
28
  alpha: PD.Numeric;
@@ -24,6 +24,7 @@ export declare const NucleotideBlockParams: {
24
24
  flatShaded: PD.BooleanParam;
25
25
  ignoreLight: PD.BooleanParam;
26
26
  xrayShaded: PD.BooleanParam;
27
+ allowTransparentBackfaces: PD.BooleanParam;
27
28
  bumpFrequency: PD.Numeric;
28
29
  bumpAmplitude: PD.Numeric;
29
30
  alpha: PD.Numeric;
@@ -27,6 +27,7 @@ export declare const NucleotideRingParams: {
27
27
  flatShaded: PD.BooleanParam;
28
28
  ignoreLight: PD.BooleanParam;
29
29
  xrayShaded: PD.BooleanParam;
30
+ allowTransparentBackfaces: PD.BooleanParam;
30
31
  bumpFrequency: PD.Numeric;
31
32
  bumpAmplitude: PD.Numeric;
32
33
  alpha: PD.Numeric;
@@ -19,6 +19,7 @@ export declare const OrientationEllipsoidMeshParams: {
19
19
  flatShaded: PD.BooleanParam;
20
20
  ignoreLight: PD.BooleanParam;
21
21
  xrayShaded: PD.BooleanParam;
22
+ allowTransparentBackfaces: PD.BooleanParam;
22
23
  bumpFrequency: PD.Numeric;
23
24
  bumpAmplitude: PD.Numeric;
24
25
  alpha: PD.Numeric;
@@ -17,6 +17,7 @@ export declare const PolymerBackboneCylinderParams: {
17
17
  doubleSided: PD.BooleanParam;
18
18
  ignoreLight: PD.BooleanParam;
19
19
  xrayShaded: PD.BooleanParam;
20
+ allowTransparentBackfaces: PD.BooleanParam;
20
21
  bumpFrequency: PD.Numeric;
21
22
  bumpAmplitude: PD.Numeric;
22
23
  alpha: PD.Numeric;
@@ -50,6 +51,7 @@ export declare function PolymerBackboneCylinderVisual(materialId: number, struct
50
51
  doubleSided: PD.BooleanParam;
51
52
  ignoreLight: PD.BooleanParam;
52
53
  xrayShaded: PD.BooleanParam;
54
+ allowTransparentBackfaces: PD.BooleanParam;
53
55
  bumpFrequency: PD.Numeric;
54
56
  bumpAmplitude: PD.Numeric;
55
57
  alpha: PD.Numeric;
@@ -16,6 +16,7 @@ export declare const PolymerBackboneSphereParams: {
16
16
  doubleSided: PD.BooleanParam;
17
17
  ignoreLight: PD.BooleanParam;
18
18
  xrayShaded: PD.BooleanParam;
19
+ allowTransparentBackfaces: PD.BooleanParam;
19
20
  bumpFrequency: PD.Numeric;
20
21
  bumpAmplitude: PD.Numeric;
21
22
  alpha: PD.Numeric;
@@ -48,6 +49,7 @@ export declare function PolymerBackboneSphereVisual(materialId: number, structur
48
49
  doubleSided: PD.BooleanParam;
49
50
  ignoreLight: PD.BooleanParam;
50
51
  xrayShaded: PD.BooleanParam;
52
+ allowTransparentBackfaces: PD.BooleanParam;
51
53
  bumpFrequency: PD.Numeric;
52
54
  bumpAmplitude: PD.Numeric;
53
55
  alpha: PD.Numeric;
@@ -21,6 +21,7 @@ export declare const PolymerDirectionParams: {
21
21
  flatShaded: PD.BooleanParam;
22
22
  ignoreLight: PD.BooleanParam;
23
23
  xrayShaded: PD.BooleanParam;
24
+ allowTransparentBackfaces: PD.BooleanParam;
24
25
  bumpFrequency: PD.Numeric;
25
26
  bumpAmplitude: PD.Numeric;
26
27
  alpha: PD.Numeric;
@@ -24,6 +24,7 @@ export declare const PolymerGapParams: {
24
24
  flatShaded: PD.BooleanParam;
25
25
  ignoreLight: PD.BooleanParam;
26
26
  xrayShaded: PD.BooleanParam;
27
+ allowTransparentBackfaces: PD.BooleanParam;
27
28
  bumpFrequency: PD.Numeric;
28
29
  bumpAmplitude: PD.Numeric;
29
30
  alpha: PD.Numeric;
@@ -42,6 +42,7 @@ export declare const PolymerTraceParams: {
42
42
  flatShaded: PD.BooleanParam;
43
43
  ignoreLight: PD.BooleanParam;
44
44
  xrayShaded: PD.BooleanParam;
45
+ allowTransparentBackfaces: PD.BooleanParam;
45
46
  bumpFrequency: PD.Numeric;
46
47
  bumpAmplitude: PD.Numeric;
47
48
  alpha: PD.Numeric;
@@ -30,6 +30,7 @@ export declare const PolymerTubeParams: {
30
30
  flatShaded: PD.BooleanParam;
31
31
  ignoreLight: PD.BooleanParam;
32
32
  xrayShaded: PD.BooleanParam;
33
+ allowTransparentBackfaces: PD.BooleanParam;
33
34
  bumpFrequency: PD.Numeric;
34
35
  bumpAmplitude: PD.Numeric;
35
36
  alpha: PD.Numeric;
@@ -1,5 +1,5 @@
1
1
  /**
2
- * Copyright (c) 2018-2021 mol* contributors, licensed under MIT, See LICENSE file for more info.
2
+ * Copyright (c) 2018-2022 mol* contributors, licensed under MIT, See LICENSE file for more info.
3
3
  *
4
4
  * @author Alexander Rose <alexander.rose@weirdbyte.de>
5
5
  */
@@ -31,6 +31,7 @@ export interface QualityProps {
31
31
  doubleSided: boolean;
32
32
  xrayShaded: boolean;
33
33
  alpha: number;
34
+ allowTransparentBackfaces: boolean;
34
35
  }
35
36
  export declare const DefaultQualityThresholds: {
36
37
  lowestElementCount: number;
@@ -1,5 +1,5 @@
1
1
  /**
2
- * Copyright (c) 2018-2021 mol* contributors, licensed under MIT, See LICENSE file for more info.
2
+ * Copyright (c) 2018-2022 mol* contributors, licensed under MIT, See LICENSE file for more info.
3
3
  *
4
4
  * @author Alexander Rose <alexander.rose@weirdbyte.de>
5
5
  */
@@ -165,7 +165,7 @@ export function getQualityProps(props, data) {
165
165
  // max resolution based on volume (for 'auto' quality)
166
166
  resolution = Math.max(resolution, volume / 500000000);
167
167
  resolution = Math.min(resolution, 20);
168
- if ((props.alpha !== undefined && props.alpha < 1) || !!props.xrayShaded) {
168
+ if (!props.allowTransparentBackfaces && ((props.alpha !== undefined && props.alpha < 1) || !!props.xrayShaded)) {
169
169
  doubleSided = false;
170
170
  }
171
171
  return {