molstar 3.0.0-dev.6 → 3.0.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (734) hide show
  1. package/README.md +7 -0
  2. package/build/viewer/index.html +4 -0
  3. package/build/viewer/molstar.js +1 -1
  4. package/lib/apps/viewer/app.d.ts +230 -0
  5. package/lib/apps/viewer/app.js +525 -0
  6. package/lib/apps/viewer/index.d.ts +2 -224
  7. package/lib/apps/viewer/index.html +4 -0
  8. package/lib/apps/viewer/index.js +2 -507
  9. package/lib/commonjs/apps/viewer/app.d.ts +230 -0
  10. package/lib/commonjs/apps/viewer/app.js +531 -0
  11. package/lib/commonjs/apps/viewer/index.d.ts +2 -224
  12. package/lib/commonjs/apps/viewer/index.js +2 -510
  13. package/lib/commonjs/examples/alpha-orbitals/index.js +1 -1
  14. package/lib/commonjs/examples/basic-wrapper/index.js +7 -3
  15. package/lib/commonjs/examples/proteopedia-wrapper/index.js +7 -1
  16. package/lib/commonjs/extensions/anvil/behavior.d.ts +4 -0
  17. package/lib/commonjs/extensions/anvil/representation.d.ts +50 -0
  18. package/lib/commonjs/extensions/anvil/representation.js +1 -1
  19. package/lib/commonjs/extensions/cellpack/representation.d.ts +10 -0
  20. package/lib/commonjs/extensions/dnatco/confal-pyramids/representation.d.ts +30 -0
  21. package/lib/commonjs/extensions/geo-export/mesh-exporter.js +4 -4
  22. package/lib/commonjs/extensions/model-export/export.d.ts +9 -0
  23. package/lib/commonjs/extensions/model-export/export.js +129 -0
  24. package/lib/commonjs/extensions/model-export/index.d.ts +7 -0
  25. package/lib/commonjs/extensions/model-export/index.js +36 -0
  26. package/lib/commonjs/extensions/model-export/ui.d.ts +11 -0
  27. package/lib/commonjs/extensions/model-export/ui.js +77 -0
  28. package/lib/commonjs/extensions/mp4-export/encoder.js +1 -1
  29. package/lib/commonjs/extensions/rcsb/assembly-symmetry/behavior.d.ts +6 -2
  30. package/lib/commonjs/extensions/rcsb/assembly-symmetry/representation.d.ts +10 -0
  31. package/lib/commonjs/extensions/rcsb/graphql/types.d.ts +2 -2
  32. package/lib/commonjs/extensions/rcsb/validation-report/representation.d.ts +50 -0
  33. package/lib/commonjs/mol-canvas3d/canvas3d.d.ts +15 -13
  34. package/lib/commonjs/mol-canvas3d/canvas3d.js +34 -29
  35. package/lib/commonjs/mol-canvas3d/controls/trackball.d.ts +9 -4
  36. package/lib/commonjs/mol-canvas3d/controls/trackball.js +50 -11
  37. package/lib/commonjs/mol-canvas3d/helper/bounding-sphere-helper.js +3 -2
  38. package/lib/commonjs/mol-canvas3d/helper/camera-helper.d.ts +4 -0
  39. package/lib/commonjs/mol-canvas3d/helper/camera-helper.js +2 -2
  40. package/lib/commonjs/mol-canvas3d/helper/handle-helper.d.ts +4 -0
  41. package/lib/commonjs/mol-canvas3d/helper/handle-helper.js +2 -2
  42. package/lib/commonjs/mol-canvas3d/helper/helper.d.ts +2 -0
  43. package/lib/commonjs/mol-canvas3d/passes/draw.d.ts +13 -1
  44. package/lib/commonjs/mol-canvas3d/passes/draw.js +16 -15
  45. package/lib/commonjs/mol-canvas3d/passes/image.d.ts +1 -0
  46. package/lib/commonjs/mol-canvas3d/passes/image.js +3 -2
  47. package/lib/commonjs/mol-canvas3d/passes/marking.js +1 -1
  48. package/lib/commonjs/mol-canvas3d/passes/multi-sample.d.ts +9 -2
  49. package/lib/commonjs/mol-canvas3d/passes/multi-sample.js +14 -12
  50. package/lib/commonjs/mol-canvas3d/passes/pick.js +12 -12
  51. package/lib/commonjs/mol-canvas3d/passes/postprocessing.js +3 -3
  52. package/lib/commonjs/mol-canvas3d/passes/smaa.js +1 -1
  53. package/lib/commonjs/mol-geo/geometry/base.d.ts +18 -0
  54. package/lib/commonjs/mol-geo/geometry/base.js +18 -1
  55. package/lib/commonjs/mol-geo/geometry/clipping-data.d.ts +1 -3
  56. package/lib/commonjs/mol-geo/geometry/clipping-data.js +3 -8
  57. package/lib/commonjs/mol-geo/geometry/color-data.d.ts +1 -1
  58. package/lib/commonjs/mol-geo/geometry/color-data.js +22 -0
  59. package/lib/commonjs/mol-geo/geometry/cylinders/cylinders.d.ts +10 -0
  60. package/lib/commonjs/mol-geo/geometry/cylinders/cylinders.js +2 -2
  61. package/lib/commonjs/mol-geo/geometry/direct-volume/direct-volume.d.ts +15 -38
  62. package/lib/commonjs/mol-geo/geometry/direct-volume/direct-volume.js +21 -66
  63. package/lib/commonjs/mol-geo/geometry/direct-volume/transfer-function.d.ts +2 -4
  64. package/lib/commonjs/mol-geo/geometry/direct-volume/transfer-function.js +4 -7
  65. package/lib/commonjs/mol-geo/geometry/image/image.d.ts +10 -0
  66. package/lib/commonjs/mol-geo/geometry/image/image.js +1 -1
  67. package/lib/commonjs/mol-geo/geometry/lines/lines.d.ts +10 -0
  68. package/lib/commonjs/mol-geo/geometry/lines/lines.js +1 -1
  69. package/lib/commonjs/mol-geo/geometry/marker-data.d.ts +0 -1
  70. package/lib/commonjs/mol-geo/geometry/marker-data.js +13 -9
  71. package/lib/commonjs/mol-geo/geometry/mesh/mesh.d.ts +10 -0
  72. package/lib/commonjs/mol-geo/geometry/mesh/mesh.js +2 -2
  73. package/lib/commonjs/mol-geo/geometry/points/points.d.ts +10 -0
  74. package/lib/commonjs/mol-geo/geometry/points/points.js +1 -1
  75. package/lib/commonjs/mol-geo/geometry/size-data.js +5 -5
  76. package/lib/commonjs/mol-geo/geometry/spheres/spheres.d.ts +10 -0
  77. package/lib/commonjs/mol-geo/geometry/spheres/spheres.js +2 -2
  78. package/lib/commonjs/mol-geo/geometry/text/text.d.ts +10 -0
  79. package/lib/commonjs/mol-geo/geometry/text/text.js +1 -1
  80. package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.d.ts +10 -0
  81. package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.js +2 -2
  82. package/lib/commonjs/mol-gl/compute/histogram-pyramid/sum.js +2 -2
  83. package/lib/commonjs/mol-gl/compute/marching-cubes/isosurface.d.ts +2 -2
  84. package/lib/commonjs/mol-gl/compute/marching-cubes/isosurface.js +10 -9
  85. package/lib/commonjs/mol-gl/render-object.d.ts +2 -1
  86. package/lib/commonjs/mol-gl/render-object.js +10 -10
  87. package/lib/commonjs/mol-gl/renderable/cylinders.d.ts +11 -5
  88. package/lib/commonjs/mol-gl/renderable/cylinders.js +3 -3
  89. package/lib/commonjs/mol-gl/renderable/direct-volume.d.ts +15 -14
  90. package/lib/commonjs/mol-gl/renderable/direct-volume.js +3 -3
  91. package/lib/commonjs/mol-gl/renderable/image.d.ts +10 -4
  92. package/lib/commonjs/mol-gl/renderable/image.js +2 -2
  93. package/lib/commonjs/mol-gl/renderable/lines.d.ts +39 -33
  94. package/lib/commonjs/mol-gl/renderable/lines.js +3 -3
  95. package/lib/commonjs/mol-gl/renderable/mesh.d.ts +11 -5
  96. package/lib/commonjs/mol-gl/renderable/mesh.js +3 -3
  97. package/lib/commonjs/mol-gl/renderable/points.d.ts +10 -4
  98. package/lib/commonjs/mol-gl/renderable/points.js +2 -2
  99. package/lib/commonjs/mol-gl/renderable/schema.d.ts +10 -11
  100. package/lib/commonjs/mol-gl/renderable/schema.js +4 -10
  101. package/lib/commonjs/mol-gl/renderable/spheres.d.ts +11 -5
  102. package/lib/commonjs/mol-gl/renderable/spheres.js +3 -3
  103. package/lib/commonjs/mol-gl/renderable/text.d.ts +10 -4
  104. package/lib/commonjs/mol-gl/renderable/text.js +2 -2
  105. package/lib/commonjs/mol-gl/renderable/texture-mesh.d.ts +11 -6
  106. package/lib/commonjs/mol-gl/renderable/texture-mesh.js +3 -3
  107. package/lib/commonjs/mol-gl/renderable.d.ts +0 -1
  108. package/lib/commonjs/mol-gl/renderer.d.ts +12 -12
  109. package/lib/commonjs/mol-gl/renderer.js +23 -92
  110. package/lib/commonjs/mol-gl/scene.d.ts +2 -2
  111. package/lib/commonjs/mol-gl/scene.js +7 -5
  112. package/lib/commonjs/mol-gl/shader/chunks/apply-light-color.glsl.d.ts +1 -1
  113. package/lib/commonjs/mol-gl/shader/chunks/apply-light-color.glsl.js +1 -1
  114. package/lib/commonjs/mol-gl/shader/chunks/assign-color-varying.glsl.d.ts +1 -1
  115. package/lib/commonjs/mol-gl/shader/chunks/assign-color-varying.glsl.js +1 -1
  116. package/lib/commonjs/mol-gl/shader/chunks/assign-group.glsl.d.ts +1 -1
  117. package/lib/commonjs/mol-gl/shader/chunks/assign-group.glsl.js +1 -1
  118. package/lib/commonjs/mol-gl/shader/chunks/assign-marker-varying.glsl.d.ts +1 -1
  119. package/lib/commonjs/mol-gl/shader/chunks/assign-marker-varying.glsl.js +1 -1
  120. package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.d.ts +1 -1
  121. package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.js +1 -1
  122. package/lib/commonjs/mol-gl/shader/chunks/assign-position.glsl.d.ts +1 -1
  123. package/lib/commonjs/mol-gl/shader/chunks/assign-position.glsl.js +1 -1
  124. package/lib/commonjs/mol-gl/shader/chunks/assign-size.glsl.d.ts +1 -1
  125. package/lib/commonjs/mol-gl/shader/chunks/assign-size.glsl.js +1 -1
  126. package/lib/commonjs/mol-gl/shader/chunks/color-frag-params.glsl.d.ts +1 -1
  127. package/lib/commonjs/mol-gl/shader/chunks/color-frag-params.glsl.js +1 -1
  128. package/lib/commonjs/mol-gl/shader/chunks/color-vert-params.glsl.d.ts +1 -1
  129. package/lib/commonjs/mol-gl/shader/chunks/color-vert-params.glsl.js +1 -1
  130. package/lib/commonjs/mol-gl/shader/chunks/common-frag-params.glsl.d.ts +1 -1
  131. package/lib/commonjs/mol-gl/shader/chunks/common-frag-params.glsl.js +1 -1
  132. package/lib/commonjs/mol-gl/shader/chunks/common-vert-params.glsl.d.ts +1 -1
  133. package/lib/commonjs/mol-gl/shader/chunks/common-vert-params.glsl.js +1 -1
  134. package/lib/commonjs/mol-gl/shader/chunks/common.glsl.d.ts +1 -1
  135. package/lib/commonjs/mol-gl/shader/chunks/common.glsl.js +1 -1
  136. package/lib/commonjs/mol-gl/shader/chunks/wboit-write.glsl.d.ts +1 -1
  137. package/lib/commonjs/mol-gl/shader/chunks/wboit-write.glsl.js +1 -1
  138. package/lib/commonjs/mol-gl/shader/compute/color-smoothing/accumulate.vert.d.ts +1 -1
  139. package/lib/commonjs/mol-gl/shader/compute/color-smoothing/accumulate.vert.js +1 -1
  140. package/lib/commonjs/mol-gl/shader/cylinders.frag.d.ts +1 -1
  141. package/lib/commonjs/mol-gl/shader/cylinders.frag.js +1 -1
  142. package/lib/commonjs/mol-gl/shader/direct-volume.frag.d.ts +1 -1
  143. package/lib/commonjs/mol-gl/shader/direct-volume.frag.js +1 -1
  144. package/lib/commonjs/mol-gl/shader/gaussian-density.frag.d.ts +1 -1
  145. package/lib/commonjs/mol-gl/shader/gaussian-density.frag.js +1 -1
  146. package/lib/commonjs/mol-gl/shader/histogram-pyramid/reduction.frag.d.ts +1 -1
  147. package/lib/commonjs/mol-gl/shader/histogram-pyramid/reduction.frag.js +1 -1
  148. package/lib/commonjs/mol-gl/shader/image.frag.d.ts +1 -1
  149. package/lib/commonjs/mol-gl/shader/image.frag.js +1 -1
  150. package/lib/commonjs/mol-gl/shader/marching-cubes/isosurface.frag.d.ts +1 -1
  151. package/lib/commonjs/mol-gl/shader/marching-cubes/isosurface.frag.js +1 -1
  152. package/lib/commonjs/mol-gl/shader/mesh.frag.d.ts +1 -1
  153. package/lib/commonjs/mol-gl/shader/mesh.frag.js +1 -1
  154. package/lib/commonjs/mol-gl/shader/mesh.vert.d.ts +1 -1
  155. package/lib/commonjs/mol-gl/shader/mesh.vert.js +1 -1
  156. package/lib/commonjs/mol-gl/shader/spheres.frag.d.ts +1 -1
  157. package/lib/commonjs/mol-gl/shader/spheres.frag.js +1 -1
  158. package/lib/commonjs/mol-gl/shader-code.d.ts +3 -1
  159. package/lib/commonjs/mol-gl/shader-code.js +43 -14
  160. package/lib/commonjs/mol-gl/webgl/render-item.d.ts +7 -6
  161. package/lib/commonjs/mol-gl/webgl/render-item.js +10 -8
  162. package/lib/commonjs/mol-gl/webgl/resources.js +8 -1
  163. package/lib/commonjs/mol-io/reader/cif/schema/bird.d.ts +1 -1
  164. package/lib/commonjs/mol-io/reader/cif/schema/bird.js +1 -1
  165. package/lib/commonjs/mol-io/reader/cif/schema/ccd.d.ts +1 -1
  166. package/lib/commonjs/mol-io/reader/cif/schema/ccd.js +1 -1
  167. package/lib/commonjs/mol-io/reader/cif/schema/mmcif.d.ts +2 -2
  168. package/lib/commonjs/mol-io/reader/cif/schema/mmcif.js +1 -1
  169. package/lib/commonjs/mol-io/reader/mol/parser.d.ts +23 -1
  170. package/lib/commonjs/mol-io/reader/mol/parser.js +116 -4
  171. package/lib/commonjs/mol-io/reader/mol2/parser.d.ts +1 -1
  172. package/lib/commonjs/mol-io/reader/mol2/parser.js +33 -3
  173. package/lib/commonjs/mol-io/reader/mol2/schema.d.ts +12 -1
  174. package/lib/commonjs/mol-io/reader/mol2/schema.js +1 -1
  175. package/lib/commonjs/mol-io/reader/sdf/parser-v3-util.d.ts +6 -0
  176. package/lib/commonjs/mol-io/reader/sdf/parser-v3-util.js +9 -0
  177. package/lib/commonjs/mol-io/reader/sdf/parser.d.ts +3 -1
  178. package/lib/commonjs/mol-io/reader/sdf/parser.js +11 -2
  179. package/lib/commonjs/mol-io/writer/cif/encoder/binary.js +9 -2
  180. package/lib/commonjs/mol-math/geometry/gaussian-density/gpu.js +2 -2
  181. package/lib/commonjs/mol-math/geometry/symmetry-operator.d.ts +1 -1
  182. package/lib/commonjs/mol-math/geometry/symmetry-operator.js +10 -4
  183. package/lib/commonjs/mol-math/linear-algebra/3d/quat.d.ts +9 -1
  184. package/lib/commonjs/mol-math/linear-algebra/3d/quat.js +20 -1
  185. package/lib/commonjs/mol-model/structure/export/mmcif.d.ts +1 -1
  186. package/lib/commonjs/mol-model/structure/export/mmcif.js +8 -5
  187. package/lib/commonjs/mol-model/structure/model/properties/common.d.ts +1 -1
  188. package/lib/commonjs/mol-model/structure/structure/element/stats.js +8 -0
  189. package/lib/commonjs/mol-model/structure/structure/properties.d.ts +1 -0
  190. package/lib/commonjs/mol-model/structure/structure/properties.js +2 -1
  191. package/lib/commonjs/mol-model/structure/structure/symmetry.js +1 -3
  192. package/lib/commonjs/mol-model/structure/structure/unit/bonds/common.d.ts +2 -1
  193. package/lib/commonjs/mol-model/structure/structure/unit/bonds/common.js +11 -2
  194. package/lib/commonjs/mol-model/structure/structure/unit/bonds/inter-compute.d.ts +1 -1
  195. package/lib/commonjs/mol-model/structure/structure/unit/bonds/inter-compute.js +20 -10
  196. package/lib/commonjs/mol-model/structure/structure/unit/bonds/intra-compute.d.ts +1 -1
  197. package/lib/commonjs/mol-model/structure/structure/unit/bonds/intra-compute.js +21 -11
  198. package/lib/commonjs/mol-model/structure/structure/util/superposition-db-mapping.js +10 -5
  199. package/lib/commonjs/mol-model-formats/shape/ply.d.ts +20 -0
  200. package/lib/commonjs/mol-model-formats/structure/basic/atomic.d.ts +2 -2
  201. package/lib/commonjs/mol-model-formats/structure/basic/atomic.js +6 -6
  202. package/lib/commonjs/mol-model-formats/structure/basic/coarse.d.ts +1 -1
  203. package/lib/commonjs/mol-model-formats/structure/basic/coarse.js +3 -3
  204. package/lib/commonjs/mol-model-formats/structure/basic/entities.d.ts +2 -1
  205. package/lib/commonjs/mol-model-formats/structure/basic/entities.js +28 -24
  206. package/lib/commonjs/mol-model-formats/structure/basic/parser.js +17 -8
  207. package/lib/commonjs/mol-model-formats/structure/basic/properties.d.ts +6 -1
  208. package/lib/commonjs/mol-model-formats/structure/basic/properties.js +12 -22
  209. package/lib/commonjs/mol-model-formats/structure/mol.d.ts +2 -1
  210. package/lib/commonjs/mol-model-formats/structure/mol.js +19 -5
  211. package/lib/commonjs/mol-model-formats/structure/mol2.d.ts +1 -1
  212. package/lib/commonjs/mol-model-formats/structure/mol2.js +37 -7
  213. package/lib/commonjs/mol-model-formats/structure/property/bonds/index-pair.d.ts +18 -1
  214. package/lib/commonjs/mol-model-formats/structure/property/bonds/index-pair.js +18 -5
  215. package/lib/commonjs/mol-model-props/common/custom-property.d.ts +1 -1
  216. package/lib/commonjs/mol-model-props/computed/representations/interactions-inter-unit-cylinder.d.ts +10 -0
  217. package/lib/commonjs/mol-model-props/computed/representations/interactions-intra-unit-cylinder.d.ts +11 -1
  218. package/lib/commonjs/mol-model-props/computed/representations/interactions-intra-unit-cylinder.js +25 -10
  219. package/lib/commonjs/mol-model-props/computed/representations/interactions.d.ts +30 -0
  220. package/lib/commonjs/mol-model-props/integrative/cross-link-restraint/representation.d.ts +40 -0
  221. package/lib/commonjs/mol-model-props/sequence/best-database-mapping.js +15 -15
  222. package/lib/commonjs/mol-plugin/animation-loop.d.ts +2 -0
  223. package/lib/commonjs/mol-plugin/animation-loop.js +1 -1
  224. package/lib/commonjs/mol-plugin/behavior/dynamic/representation.js +4 -6
  225. package/lib/commonjs/mol-plugin/behavior/dynamic/selection/structure-focus-representation.d.ts +11 -0
  226. package/lib/commonjs/mol-plugin/behavior/dynamic/selection/structure-focus-representation.js +3 -1
  227. package/lib/commonjs/mol-plugin/commands.d.ts +7 -6
  228. package/lib/commonjs/mol-plugin/config.d.ts +1 -2
  229. package/lib/commonjs/mol-plugin/config.js +4 -25
  230. package/lib/commonjs/mol-plugin/features.d.ts +9 -0
  231. package/lib/commonjs/mol-plugin/features.js +38 -0
  232. package/lib/commonjs/mol-plugin/spec.d.ts +1 -1
  233. package/lib/commonjs/mol-plugin/spec.js +4 -1
  234. package/lib/commonjs/mol-plugin/util/viewport-screenshot.d.ts +12 -0
  235. package/lib/commonjs/mol-plugin-state/actions/file.d.ts +3 -2
  236. package/lib/commonjs/mol-plugin-state/actions/file.js +67 -31
  237. package/lib/commonjs/mol-plugin-state/actions/structure.d.ts +1 -0
  238. package/lib/commonjs/mol-plugin-state/actions/structure.js +41 -8
  239. package/lib/commonjs/mol-plugin-state/animation/built-in/camera-rock.d.ts +16 -0
  240. package/lib/commonjs/mol-plugin-state/animation/built-in/camera-rock.js +62 -0
  241. package/lib/commonjs/mol-plugin-state/animation/built-in/camera-spin.d.ts +1 -1
  242. package/lib/commonjs/mol-plugin-state/animation/built-in/camera-spin.js +9 -8
  243. package/lib/commonjs/mol-plugin-state/animation/model.d.ts +4 -0
  244. package/lib/commonjs/mol-plugin-state/builder/structure/hierarchy-preset.d.ts +6 -6
  245. package/lib/commonjs/mol-plugin-state/builder/structure/hierarchy.d.ts +1 -1
  246. package/lib/commonjs/mol-plugin-state/builder/structure/representation-preset.d.ts +149 -5
  247. package/lib/commonjs/mol-plugin-state/builder/structure/representation-preset.js +74 -2
  248. package/lib/commonjs/mol-plugin-state/helpers/structure-clipping.d.ts +1 -1
  249. package/lib/commonjs/mol-plugin-state/helpers/structure-clipping.js +1 -1
  250. package/lib/commonjs/mol-plugin-state/manager/animation.d.ts +5 -1
  251. package/lib/commonjs/mol-plugin-state/manager/animation.js +5 -5
  252. package/lib/commonjs/mol-plugin-state/manager/structure/component.d.ts +13 -1
  253. package/lib/commonjs/mol-plugin-state/manager/structure/component.js +13 -8
  254. package/lib/commonjs/mol-plugin-state/manager/structure/selection.js +3 -1
  255. package/lib/commonjs/mol-plugin-state/transforms/representation.d.ts +32 -0
  256. package/lib/commonjs/mol-plugin-state/transforms/representation.js +2 -2
  257. package/lib/commonjs/mol-plugin-ui/structure/superposition.js +2 -2
  258. package/lib/commonjs/mol-plugin-ui/viewport/simple-settings.d.ts +1 -1
  259. package/lib/commonjs/mol-plugin-ui/viewport/simple-settings.js +6 -14
  260. package/lib/commonjs/mol-repr/shape/loci/angle.d.ts +10 -0
  261. package/lib/commonjs/mol-repr/shape/loci/common.d.ts +10 -0
  262. package/lib/commonjs/mol-repr/shape/loci/dihedral.d.ts +10 -0
  263. package/lib/commonjs/mol-repr/shape/loci/distance.d.ts +10 -0
  264. package/lib/commonjs/mol-repr/shape/loci/label.d.ts +10 -0
  265. package/lib/commonjs/mol-repr/shape/loci/orientation.d.ts +10 -0
  266. package/lib/commonjs/mol-repr/shape/loci/plane.d.ts +10 -0
  267. package/lib/commonjs/mol-repr/shape/model/unitcell.d.ts +10 -0
  268. package/lib/commonjs/mol-repr/structure/complex-representation.js +1 -1
  269. package/lib/commonjs/mol-repr/structure/complex-visual.d.ts +61 -19
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  554. package/lib/mol-model/structure/structure/unit/bonds/inter-compute.js +21 -11
  555. package/lib/mol-model/structure/structure/unit/bonds/intra-compute.d.ts +1 -1
  556. package/lib/mol-model/structure/structure/unit/bonds/intra-compute.js +22 -12
  557. package/lib/mol-model/structure/structure/util/superposition-db-mapping.js +10 -5
  558. package/lib/mol-model-formats/shape/ply.d.ts +20 -0
  559. package/lib/mol-model-formats/structure/basic/atomic.d.ts +2 -2
  560. package/lib/mol-model-formats/structure/basic/atomic.js +6 -6
  561. package/lib/mol-model-formats/structure/basic/coarse.d.ts +1 -1
  562. package/lib/mol-model-formats/structure/basic/coarse.js +3 -3
  563. package/lib/mol-model-formats/structure/basic/entities.d.ts +2 -1
  564. package/lib/mol-model-formats/structure/basic/entities.js +25 -22
  565. package/lib/mol-model-formats/structure/basic/parser.js +19 -10
  566. package/lib/mol-model-formats/structure/basic/properties.d.ts +6 -1
  567. package/lib/mol-model-formats/structure/basic/properties.js +12 -25
  568. package/lib/mol-model-formats/structure/mol.d.ts +2 -1
  569. package/lib/mol-model-formats/structure/mol.js +17 -3
  570. package/lib/mol-model-formats/structure/mol2.d.ts +1 -1
  571. package/lib/mol-model-formats/structure/mol2.js +37 -7
  572. package/lib/mol-model-formats/structure/property/bonds/index-pair.d.ts +18 -1
  573. package/lib/mol-model-formats/structure/property/bonds/index-pair.js +18 -5
  574. package/lib/mol-model-props/common/custom-property.d.ts +1 -1
  575. package/lib/mol-model-props/computed/representations/interactions-inter-unit-cylinder.d.ts +10 -0
  576. package/lib/mol-model-props/computed/representations/interactions-intra-unit-cylinder.d.ts +11 -1
  577. package/lib/mol-model-props/computed/representations/interactions-intra-unit-cylinder.js +25 -10
  578. package/lib/mol-model-props/computed/representations/interactions.d.ts +30 -0
  579. package/lib/mol-model-props/integrative/cross-link-restraint/representation.d.ts +40 -0
  580. package/lib/mol-model-props/sequence/best-database-mapping.js +15 -15
  581. package/lib/mol-plugin/animation-loop.d.ts +2 -0
  582. package/lib/mol-plugin/animation-loop.js +1 -1
  583. package/lib/mol-plugin/behavior/dynamic/representation.js +4 -6
  584. package/lib/mol-plugin/behavior/dynamic/selection/structure-focus-representation.d.ts +11 -0
  585. package/lib/mol-plugin/behavior/dynamic/selection/structure-focus-representation.js +3 -1
  586. package/lib/mol-plugin/commands.d.ts +7 -6
  587. package/lib/mol-plugin/config.d.ts +1 -2
  588. package/lib/mol-plugin/config.js +3 -23
  589. package/lib/mol-plugin/features.d.ts +9 -0
  590. package/lib/mol-plugin/features.js +35 -0
  591. package/lib/mol-plugin/spec.d.ts +1 -1
  592. package/lib/mol-plugin/spec.js +4 -1
  593. package/lib/mol-plugin/util/viewport-screenshot.d.ts +12 -0
  594. package/lib/mol-plugin/version.js +2 -2
  595. package/lib/mol-plugin-state/actions/file.d.ts +3 -2
  596. package/lib/mol-plugin-state/actions/file.js +67 -31
  597. package/lib/mol-plugin-state/actions/structure.d.ts +1 -0
  598. package/lib/mol-plugin-state/actions/structure.js +41 -8
  599. package/lib/mol-plugin-state/animation/built-in/camera-rock.d.ts +16 -0
  600. package/lib/mol-plugin-state/animation/built-in/camera-rock.js +59 -0
  601. package/lib/mol-plugin-state/animation/built-in/camera-spin.d.ts +1 -1
  602. package/lib/mol-plugin-state/animation/built-in/camera-spin.js +9 -8
  603. package/lib/mol-plugin-state/animation/model.d.ts +4 -0
  604. package/lib/mol-plugin-state/builder/structure/hierarchy-preset.d.ts +6 -6
  605. package/lib/mol-plugin-state/builder/structure/hierarchy.d.ts +1 -1
  606. package/lib/mol-plugin-state/builder/structure/representation-preset.d.ts +149 -5
  607. package/lib/mol-plugin-state/builder/structure/representation-preset.js +74 -2
  608. package/lib/mol-plugin-state/helpers/structure-clipping.d.ts +1 -1
  609. package/lib/mol-plugin-state/helpers/structure-clipping.js +1 -1
  610. package/lib/mol-plugin-state/manager/animation.d.ts +5 -1
  611. package/lib/mol-plugin-state/manager/animation.js +5 -5
  612. package/lib/mol-plugin-state/manager/structure/component.d.ts +13 -1
  613. package/lib/mol-plugin-state/manager/structure/component.js +13 -8
  614. package/lib/mol-plugin-state/manager/structure/selection.js +3 -1
  615. package/lib/mol-plugin-state/transforms/representation.d.ts +32 -0
  616. package/lib/mol-plugin-state/transforms/representation.js +2 -2
  617. package/lib/mol-plugin-ui/structure/superposition.js +2 -2
  618. package/lib/mol-plugin-ui/viewport/simple-settings.d.ts +1 -1
  619. package/lib/mol-plugin-ui/viewport/simple-settings.js +6 -14
  620. package/lib/mol-repr/shape/loci/angle.d.ts +10 -0
  621. package/lib/mol-repr/shape/loci/common.d.ts +10 -0
  622. package/lib/mol-repr/shape/loci/dihedral.d.ts +10 -0
  623. package/lib/mol-repr/shape/loci/distance.d.ts +10 -0
  624. package/lib/mol-repr/shape/loci/label.d.ts +10 -0
  625. package/lib/mol-repr/shape/loci/orientation.d.ts +10 -0
  626. package/lib/mol-repr/shape/loci/plane.d.ts +10 -0
  627. package/lib/mol-repr/shape/model/unitcell.d.ts +10 -0
  628. package/lib/mol-repr/structure/complex-representation.js +1 -1
  629. package/lib/mol-repr/structure/complex-visual.d.ts +61 -19
  630. package/lib/mol-repr/structure/params.d.ts +81 -19
  631. package/lib/mol-repr/structure/registry.d.ts +141 -19
  632. package/lib/mol-repr/structure/representation/backbone.d.ts +30 -0
  633. package/lib/mol-repr/structure/representation/ball-and-stick.d.ts +30 -0
  634. package/lib/mol-repr/structure/representation/carbohydrate.d.ts +30 -0
  635. package/lib/mol-repr/structure/representation/cartoon.d.ts +30 -0
  636. package/lib/mol-repr/structure/representation/ellipsoid.d.ts +30 -0
  637. package/lib/mol-repr/structure/representation/gaussian-surface.d.ts +30 -0
  638. package/lib/mol-repr/structure/representation/gaussian-surface.js +1 -1
  639. package/lib/mol-repr/structure/representation/gaussian-volume.d.ts +34 -58
  640. package/lib/mol-repr/structure/representation/gaussian-volume.js +2 -7
  641. package/lib/mol-repr/structure/representation/label.d.ts +30 -0
  642. package/lib/mol-repr/structure/representation/label.js +1 -1
  643. package/lib/mol-repr/structure/representation/line.d.ts +30 -0
  644. package/lib/mol-repr/structure/representation/molecular-surface.d.ts +30 -0
  645. package/lib/mol-repr/structure/representation/molecular-surface.js +1 -1
  646. package/lib/mol-repr/structure/representation/orientation.d.ts +30 -0
  647. package/lib/mol-repr/structure/representation/point.d.ts +30 -0
  648. package/lib/mol-repr/structure/representation/putty.d.ts +30 -0
  649. package/lib/mol-repr/structure/representation/spacefill.d.ts +30 -0
  650. package/lib/mol-repr/structure/units-representation.js +1 -1
  651. package/lib/mol-repr/structure/units-visual.d.ts +81 -19
  652. package/lib/mol-repr/structure/visual/bond-inter-unit-cylinder.d.ts +20 -0
  653. package/lib/mol-repr/structure/visual/bond-inter-unit-line.d.ts +10 -0
  654. package/lib/mol-repr/structure/visual/bond-intra-unit-cylinder.d.ts +20 -0
  655. package/lib/mol-repr/structure/visual/bond-intra-unit-line.d.ts +10 -0
  656. package/lib/mol-repr/structure/visual/carbohydrate-link-cylinder.d.ts +11 -1
  657. package/lib/mol-repr/structure/visual/carbohydrate-link-cylinder.js +8 -4
  658. package/lib/mol-repr/structure/visual/carbohydrate-symbol-mesh.d.ts +11 -1
  659. package/lib/mol-repr/structure/visual/carbohydrate-symbol-mesh.js +10 -6
  660. package/lib/mol-repr/structure/visual/carbohydrate-terminal-link-cylinder.d.ts +11 -1
  661. package/lib/mol-repr/structure/visual/carbohydrate-terminal-link-cylinder.js +8 -4
  662. package/lib/mol-repr/structure/visual/element-cross.d.ts +10 -0
  663. package/lib/mol-repr/structure/visual/element-point.d.ts +10 -0
  664. package/lib/mol-repr/structure/visual/element-sphere.d.ts +20 -0
  665. package/lib/mol-repr/structure/visual/ellipsoid-mesh.d.ts +10 -0
  666. package/lib/mol-repr/structure/visual/gaussian-density-volume.d.ts +22 -38
  667. package/lib/mol-repr/structure/visual/gaussian-density-volume.js +8 -6
  668. package/lib/mol-repr/structure/visual/gaussian-surface-mesh.d.ts +40 -0
  669. package/lib/mol-repr/structure/visual/gaussian-surface-mesh.js +11 -8
  670. package/lib/mol-repr/structure/visual/gaussian-surface-wireframe.d.ts +10 -0
  671. package/lib/mol-repr/structure/visual/gaussian-surface-wireframe.js +1 -1
  672. package/lib/mol-repr/structure/visual/label-text.d.ts +10 -0
  673. package/lib/mol-repr/structure/visual/label-text.js +1 -2
  674. package/lib/mol-repr/structure/visual/molecular-surface-mesh.d.ts +10 -0
  675. package/lib/mol-repr/structure/visual/molecular-surface-mesh.js +1 -1
  676. package/lib/mol-repr/structure/visual/molecular-surface-wireframe.d.ts +10 -0
  677. package/lib/mol-repr/structure/visual/molecular-surface-wireframe.js +1 -1
  678. package/lib/mol-repr/structure/visual/nucleotide-block-mesh.d.ts +10 -0
  679. package/lib/mol-repr/structure/visual/nucleotide-ring-mesh.d.ts +10 -0
  680. package/lib/mol-repr/structure/visual/orientation-ellipsoid-mesh.d.ts +10 -0
  681. package/lib/mol-repr/structure/visual/polymer-backbone-cylinder.d.ts +20 -0
  682. package/lib/mol-repr/structure/visual/polymer-backbone-sphere.d.ts +20 -0
  683. package/lib/mol-repr/structure/visual/polymer-direction-wedge.d.ts +10 -0
  684. package/lib/mol-repr/structure/visual/polymer-gap-cylinder.d.ts +10 -0
  685. package/lib/mol-repr/structure/visual/polymer-trace-mesh.d.ts +10 -0
  686. package/lib/mol-repr/structure/visual/polymer-tube-mesh.d.ts +10 -0
  687. package/lib/mol-repr/structure/visual/util/common.d.ts +3 -2
  688. package/lib/mol-repr/structure/visual/util/common.js +2 -5
  689. package/lib/mol-repr/structure/visual/util/gaussian.d.ts +7 -6
  690. package/lib/mol-repr/structure/visual/util/gaussian.js +12 -12
  691. package/lib/mol-repr/structure/visual/util/molecular-surface.d.ts +2 -1
  692. package/lib/mol-repr/structure/visual/util/molecular-surface.js +4 -4
  693. package/lib/mol-repr/visual.d.ts +1 -1
  694. package/lib/mol-repr/visual.js +13 -8
  695. package/lib/mol-repr/volume/direct-volume.d.ts +33 -57
  696. package/lib/mol-repr/volume/direct-volume.js +8 -12
  697. package/lib/mol-repr/volume/isosurface.d.ts +60 -0
  698. package/lib/mol-repr/volume/isosurface.js +11 -2
  699. package/lib/mol-repr/volume/registry.d.ts +31 -19
  700. package/lib/mol-repr/volume/representation.d.ts +10 -0
  701. package/lib/mol-repr/volume/slice.d.ts +30 -0
  702. package/lib/mol-repr/volume/slice.js +2 -2
  703. package/lib/mol-repr/volume/util.js +2 -2
  704. package/lib/mol-state/tree/immutable.d.ts +18 -0
  705. package/lib/mol-state/tree/transient.d.ts +3 -4
  706. package/lib/mol-theme/clipping.d.ts +7 -15
  707. package/lib/mol-theme/clipping.js +5 -12
  708. package/lib/mol-theme/color/element-symbol.d.ts +243 -1
  709. package/lib/mol-theme/color/element-symbol.js +10 -5
  710. package/lib/mol-theme/color/entity-id.d.ts +1 -1
  711. package/lib/mol-theme/color/entity-id.js +26 -5
  712. package/lib/mol-theme/color/illustrative.d.ts +100 -29
  713. package/lib/mol-theme/color/illustrative.js +26 -7
  714. package/lib/mol-theme/color/molecule-type.d.ts +19 -1
  715. package/lib/mol-theme/color/molecule-type.js +10 -5
  716. package/lib/mol-theme/color/residue-name.d.ts +77 -1
  717. package/lib/mol-theme/color/residue-name.js +10 -5
  718. package/lib/mol-theme/color/secondary-structure.d.ts +27 -1
  719. package/lib/mol-theme/color/secondary-structure.js +10 -5
  720. package/lib/mol-theme/color/volume-value.d.ts +17 -0
  721. package/lib/mol-theme/color/volume-value.js +52 -0
  722. package/lib/mol-theme/color.d.ts +233 -14
  723. package/lib/mol-theme/color.js +2 -0
  724. package/lib/mol-util/clip.d.ts +49 -0
  725. package/lib/mol-util/clip.js +93 -0
  726. package/lib/mol-util/color/color.d.ts +1 -1
  727. package/lib/mol-util/color/color.js +1 -1
  728. package/lib/mol-util/color/params.d.ts +10 -0
  729. package/lib/mol-util/color/params.js +15 -0
  730. package/lib/mol-util/number-packing.d.ts +11 -0
  731. package/lib/mol-util/{float-packing.js → number-packing.js} +7 -14
  732. package/package.json +36 -35
  733. package/lib/commonjs/mol-util/float-packing.d.ts +0 -15
  734. package/lib/mol-util/float-packing.d.ts +0 -15
@@ -107,18 +107,18 @@ export declare const Canvas3DParams: {
107
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  }>[];
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  ambientColor: import("../mol-util/color").Color;
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  ambientIntensity: number;
110
- clip: PD.Normalize<{
111
- variant: any;
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- objects: any;
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- }>;
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  }>>;
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  trackball: PD.Group<PD.Normalize<{
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  noScroll: boolean;
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  rotateSpeed: number;
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  zoomSpeed: number;
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  panSpeed: number;
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- spin: boolean;
121
- spinSpeed: number;
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+ animate: PD.NamedParams<PD.Normalize<unknown>, "off"> | PD.NamedParams<PD.Normalize<{
117
+ speed: any;
118
+ }>, "spin"> | PD.NamedParams<PD.Normalize<{
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+ speed: any;
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+ angle: any;
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+ }>, "rock">;
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  staticMoving: boolean;
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  dynamicDampingFactor: number;
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  minDistance: number;
@@ -169,6 +169,7 @@ export declare const Canvas3DParams: {
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  bumpAmplitude: any;
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  quality: any;
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  material: any;
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+ clip: any;
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  }>, "on">;
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  }>>;
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  };
@@ -258,18 +259,18 @@ export declare const DefaultCanvas3DParams: PD.Values<{
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  }>[];
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  ambientColor: import("../mol-util/color").Color;
260
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  ambientIntensity: number;
261
- clip: PD.Normalize<{
262
- variant: any;
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- objects: any;
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- }>;
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  }>>;
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  trackball: PD.Group<PD.Normalize<{
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  noScroll: boolean;
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  rotateSpeed: number;
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  zoomSpeed: number;
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  panSpeed: number;
271
- spin: boolean;
272
- spinSpeed: number;
268
+ animate: PD.NamedParams<PD.Normalize<unknown>, "off"> | PD.NamedParams<PD.Normalize<{
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+ speed: any;
270
+ }>, "spin"> | PD.NamedParams<PD.Normalize<{
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+ speed: any;
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+ angle: any;
273
+ }>, "rock">;
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  staticMoving: boolean;
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  dynamicDampingFactor: number;
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  minDistance: number;
@@ -320,6 +321,7 @@ export declare const DefaultCanvas3DParams: PD.Values<{
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  bumpAmplitude: any;
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  quality: any;
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  material: any;
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+ clip: any;
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  }>, "on">;
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  }>>;
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  }>;
@@ -380,7 +382,7 @@ interface Canvas3D {
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  update(repr?: Representation.Any, keepBoundingSphere?: boolean): void;
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  clear(): void;
382
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  syncVisibility(): void;
383
- requestDraw(force?: boolean): void;
385
+ requestDraw(): void;
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  /** Reset the timers, used by "animate" */
385
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  resetTime(t: number): void;
386
388
  animate(): void;
@@ -38,6 +38,7 @@ var helper_1 = require("./helper/helper");
38
38
  var passes_1 = require("./passes/passes");
39
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  var mol_util_1 = require("../mol-util");
40
40
  var marking_1 = require("./passes/marking");
41
+ var render_item_1 = require("../mol-gl/webgl/render-item");
41
42
  exports.Canvas3DParams = {
42
43
  camera: param_definition_1.ParamDefinition.Group({
43
44
  mode: param_definition_1.ParamDefinition.Select('perspective', param_definition_1.ParamDefinition.arrayToOptions(['perspective', 'orthographic']), { label: 'Camera' }),
@@ -202,7 +203,7 @@ var Canvas3D;
202
203
  var width = 128;
203
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  var height = 128;
204
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  updateViewport();
205
- var scene = scene_1.Scene.create(webgl);
206
+ var scene = scene_1.Scene.create(webgl, passes.draw.wboitEnabled ? render_item_1.GraphicsRenderVariantsWboit : render_item_1.GraphicsRenderVariantsBlended);
206
207
  var camera = new camera_1.Camera({
207
208
  position: linear_algebra_1.Vec3.create(0, 0, 100),
208
209
  mode: p.camera.mode,
@@ -254,16 +255,24 @@ var Canvas3D;
254
255
  changed = helper.camera.mark(loci, action) || changed;
255
256
  reprRenderObjects.forEach(function (_, _repr) { changed = _repr.mark(loci, action) || changed; });
256
257
  }
257
- if (changed && !noDraw) {
258
- scene.update(void 0, true);
259
- helper.handle.scene.update(void 0, true);
260
- helper.camera.scene.update(void 0, true);
261
- var prevPickDirty = pickHelper.dirty;
262
- draw(true);
263
- pickHelper.dirty = prevPickDirty; // marking does not change picking buffers
258
+ if (changed) {
259
+ if (noDraw) {
260
+ // Even with `noDraw` make sure changes will be rendered.
261
+ // Note that with this calling mark (with or without `noDraw`) multiple times
262
+ // during a JS event loop iteration will only result in a single render call.
263
+ forceNextRender = true;
264
+ }
265
+ else {
266
+ scene.update(void 0, true);
267
+ helper.handle.scene.update(void 0, true);
268
+ helper.camera.scene.update(void 0, true);
269
+ var prevPickDirty = pickHelper.dirty;
270
+ draw({ force: true, allowMulti: true });
271
+ pickHelper.dirty = prevPickDirty; // marking does not change picking buffers
272
+ }
264
273
  }
265
274
  }
266
- function render(force) {
275
+ function render(force, allowMulti) {
267
276
  if (webgl.isContextLost)
268
277
  return false;
269
278
  var resized = false;
@@ -287,17 +296,13 @@ var Canvas3D;
287
296
  stereoCamera.update();
288
297
  cam = stereoCamera;
289
298
  }
299
+ var ctx = { renderer: renderer, camera: cam, scene: scene, helper: helper };
290
300
  if (multi_sample_1.MultiSamplePass.isEnabled(p.multiSample)) {
291
- if (!cameraChanged) {
292
- while (!multiSampleHelper.render(renderer, cam, scene, helper, true, p.transparentBackground, p))
293
- ;
294
- }
295
- else {
296
- multiSampleHelper.render(renderer, cam, scene, helper, true, p.transparentBackground, p);
297
- }
301
+ var forceOn = !cameraChanged && allowMulti && !controls.isAnimating;
302
+ multiSampleHelper.render(ctx, p, true, forceOn);
298
303
  }
299
304
  else {
300
- passes.draw.render(renderer, cam, scene, helper, true, p.transparentBackground, p.postprocessing, p.marking);
305
+ passes.draw.render(ctx, p, true);
301
306
  }
302
307
  pickHelper.dirty = true;
303
308
  didRender = true;
@@ -308,15 +313,15 @@ var Canvas3D;
308
313
  var forceDrawAfterAllCommited = false;
309
314
  var currentTime = 0;
310
315
  var drawPaused = false;
311
- function draw(force) {
316
+ function draw(options) {
312
317
  if (drawPaused)
313
318
  return;
314
- if (render(!!force) && notifyDidDraw) {
319
+ if (render(!!(options === null || options === void 0 ? void 0 : options.force), !!(options === null || options === void 0 ? void 0 : options.allowMulti)) && notifyDidDraw) {
315
320
  didDraw.next((0, now_1.now)() - startTime);
316
321
  }
317
322
  }
318
- function requestDraw(force) {
319
- forceNextRender = forceNextRender || !!force;
323
+ function requestDraw() {
324
+ forceNextRender = true;
320
325
  }
321
326
  var animationFrameHandle = 0;
322
327
  function tick(t, options) {
@@ -326,7 +331,7 @@ var Canvas3D;
326
331
  if (options === null || options === void 0 ? void 0 : options.manualDraw) {
327
332
  return;
328
333
  }
329
- draw(false);
334
+ draw();
330
335
  if (!camera.transition.inTransition && !webgl.isContextLost) {
331
336
  interactionHelper.tick(currentTime);
332
337
  }
@@ -364,7 +369,7 @@ var Canvas3D;
364
369
  if (forceDrawAfterAllCommited) {
365
370
  if (helper.debug.isEnabled)
366
371
  helper.debug.update();
367
- draw(true);
372
+ draw({ force: true });
368
373
  forceDrawAfterAllCommited = false;
369
374
  }
370
375
  commited.next((0, now_1.now)());
@@ -533,11 +538,11 @@ var Canvas3D;
533
538
  }
534
539
  var contextRestoredSub = contextRestored.subscribe(function () {
535
540
  pickHelper.dirty = true;
536
- draw(true);
541
+ draw({ force: true });
537
542
  // Unclear why, but in Chrome with wboit enabled the first `draw` only clears
538
543
  // the drawingBuffer. Note that in Firefox the drawingBuffer is preserved after
539
544
  // context loss so it is unclear if it behaves the same.
540
- draw(true);
545
+ draw({ force: true });
541
546
  });
542
547
  var resized = new rxjs_1.BehaviorSubject(0);
543
548
  function handleResize(draw) {
@@ -546,7 +551,7 @@ var Canvas3D;
546
551
  updateViewport();
547
552
  syncViewport();
548
553
  if (draw)
549
- requestDraw(true);
554
+ requestDraw();
550
555
  resized.next(+new Date());
551
556
  }
552
557
  return {
@@ -571,7 +576,7 @@ var Canvas3D;
571
576
  reprRenderObjects.clear();
572
577
  scene.clear();
573
578
  helper.debug.clear();
574
- requestDraw(true);
579
+ requestDraw();
575
580
  reprCount.next(reprRenderObjects.size);
576
581
  },
577
582
  syncVisibility: function () {
@@ -583,7 +588,7 @@ var Canvas3D;
583
588
  if (helper.debug.isEnabled)
584
589
  helper.debug.update();
585
590
  }
586
- requestDraw(true);
591
+ requestDraw();
587
592
  },
588
593
  requestDraw: requestDraw,
589
594
  tick: tick,
@@ -680,7 +685,7 @@ var Canvas3D;
680
685
  p.camera.stereo.name = 'off';
681
686
  }
682
687
  if (!doNotRequestDraw) {
683
- requestDraw(true);
688
+ requestDraw();
684
689
  }
685
690
  },
686
691
  getImagePass: function (props) {
@@ -1,5 +1,5 @@
1
1
  /**
2
- * Copyright (c) 2018-2021 mol* contributors, licensed under MIT, See LICENSE file for more info.
2
+ * Copyright (c) 2018-2022 mol* contributors, licensed under MIT, See LICENSE file for more info.
3
3
  *
4
4
  * @author Alexander Rose <alexander.rose@weirdbyte.de>
5
5
  * @author David Sehnal <david.sehnal@gmail.com>
@@ -28,8 +28,12 @@ export declare const TrackballControlsParams: {
28
28
  rotateSpeed: PD.Numeric;
29
29
  zoomSpeed: PD.Numeric;
30
30
  panSpeed: PD.Numeric;
31
- spin: PD.BooleanParam;
32
- spinSpeed: PD.Numeric;
31
+ animate: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "off"> | PD.NamedParams<PD.Normalize<{
32
+ speed: number;
33
+ }>, "spin"> | PD.NamedParams<PD.Normalize<{
34
+ speed: number;
35
+ angle: number;
36
+ }>, "rock">>;
33
37
  staticMoving: PD.BooleanParam;
34
38
  dynamicDampingFactor: PD.Numeric;
35
39
  minDistance: PD.Numeric;
@@ -61,7 +65,8 @@ export declare const TrackballControlsParams: {
61
65
  export declare type TrackballControlsProps = PD.Values<typeof TrackballControlsParams>;
62
66
  export { TrackballControls };
63
67
  interface TrackballControls {
64
- viewport: Viewport;
68
+ readonly viewport: Viewport;
69
+ readonly isAnimating: boolean;
65
70
  readonly props: Readonly<TrackballControlsProps>;
66
71
  setProps: (props: Partial<TrackballControlsProps>) => void;
67
72
  start: (t: number) => void;
@@ -1,6 +1,6 @@
1
1
  "use strict";
2
2
  /**
3
- * Copyright (c) 2018-2021 mol* contributors, licensed under MIT, See LICENSE file for more info.
3
+ * Copyright (c) 2018-2022 mol* contributors, licensed under MIT, See LICENSE file for more info.
4
4
  *
5
5
  * @author Alexander Rose <alexander.rose@weirdbyte.de>
6
6
  * @author David Sehnal <david.sehnal@gmail.com>
@@ -36,8 +36,16 @@ exports.TrackballControlsParams = {
36
36
  rotateSpeed: param_definition_1.ParamDefinition.Numeric(5.0, { min: 1, max: 10, step: 1 }),
37
37
  zoomSpeed: param_definition_1.ParamDefinition.Numeric(7.0, { min: 1, max: 15, step: 1 }),
38
38
  panSpeed: param_definition_1.ParamDefinition.Numeric(1.0, { min: 0.1, max: 5, step: 0.1 }),
39
- spin: param_definition_1.ParamDefinition.Boolean(false, { description: 'Spin the 3D scene around the x-axis in view space' }),
40
- spinSpeed: param_definition_1.ParamDefinition.Numeric(1, { min: -20, max: 20, step: 1 }),
39
+ animate: param_definition_1.ParamDefinition.MappedStatic('off', {
40
+ off: param_definition_1.ParamDefinition.EmptyGroup(),
41
+ spin: param_definition_1.ParamDefinition.Group({
42
+ speed: param_definition_1.ParamDefinition.Numeric(1, { min: -20, max: 20, step: 1 }),
43
+ }, { description: 'Spin the 3D scene around the x-axis in view space' }),
44
+ rock: param_definition_1.ParamDefinition.Group({
45
+ speed: param_definition_1.ParamDefinition.Numeric(0.3, { min: -5, max: 5, step: 0.1 }),
46
+ angle: param_definition_1.ParamDefinition.Numeric(10, { min: 0, max: 90, step: 1 }, { description: 'How many degrees to rotate in each direction.' }),
47
+ }, { description: 'Rock the 3D scene around the x-axis in view space' })
48
+ }),
41
49
  staticMoving: param_definition_1.ParamDefinition.Boolean(true, { isHidden: true }),
42
50
  dynamicDampingFactor: param_definition_1.ParamDefinition.Numeric(0.2, {}, { isHidden: true }),
43
51
  minDistance: param_definition_1.ParamDefinition.Numeric(0.01, {}, { isHidden: true }),
@@ -101,6 +109,10 @@ var TrackballControls;
101
109
  return linear_algebra_1.Vec2.set(mouseOnCircleVec2, (pageX - viewport.width * 0.5 - viewport.x) / (viewport.width * 0.5), (viewport.height + 2 * (viewport.y - pageY)) / viewport.width // screen.width intentional
102
110
  );
103
111
  }
112
+ function getRotateFactor() {
113
+ var aspectRatio = input.width / input.height;
114
+ return p.rotateSpeed * input.pixelRatio * aspectRatio;
115
+ }
104
116
  var rotAxis = (0, linear_algebra_1.Vec3)();
105
117
  var rotQuat = (0, linear_algebra_1.Quat)();
106
118
  var rotEyeDir = (0, linear_algebra_1.Vec3)();
@@ -111,8 +123,7 @@ var TrackballControls;
111
123
  var dx = _rotCurr[0] - _rotPrev[0];
112
124
  var dy = _rotCurr[1] - _rotPrev[1];
113
125
  linear_algebra_1.Vec3.set(rotMoveDir, dx, dy, 0);
114
- var aspectRatio = input.width / input.height;
115
- var angle = linear_algebra_1.Vec3.magnitude(rotMoveDir) * p.rotateSpeed * input.pixelRatio * aspectRatio;
126
+ var angle = linear_algebra_1.Vec3.magnitude(rotMoveDir) * getRotateFactor();
116
127
  if (angle) {
117
128
  linear_algebra_1.Vec3.sub(_eye, camera.position, camera.target);
118
129
  linear_algebra_1.Vec3.normalize(rotEyeDir, _eye);
@@ -238,8 +249,12 @@ var TrackballControls;
238
249
  function update(t) {
239
250
  if (lastUpdated === t)
240
251
  return;
241
- if (p.spin && lastUpdated > 0)
242
- spin(t - lastUpdated);
252
+ if (lastUpdated > 0) {
253
+ if (p.animate.name === 'spin')
254
+ spin(t - lastUpdated);
255
+ else if (p.animate.name === 'rock')
256
+ rock(t - lastUpdated);
257
+ }
243
258
  linear_algebra_1.Vec3.sub(_eye, camera.position, camera.target);
244
259
  rotateCamera();
245
260
  zRotateCamera();
@@ -270,6 +285,7 @@ var TrackballControls;
270
285
  if (!isStart && !_isInteracting)
271
286
  return;
272
287
  _isInteracting = true;
288
+ resetRock(); // start rocking from the center after interactions
273
289
  var dragRotate = binding_1.Binding.match(p.bindings.dragRotate, buttons, modifiers);
274
290
  var dragRotateZ = binding_1.Binding.match(p.bindings.dragRotateZ, buttons, modifiers);
275
291
  var dragPan = binding_1.Binding.match(p.bindings.dragPan, buttons, modifiers);
@@ -358,12 +374,30 @@ var TrackballControls;
358
374
  }
359
375
  var _spinSpeed = linear_algebra_1.Vec2.create(0.005, 0);
360
376
  function spin(deltaT) {
361
- if (p.spinSpeed === 0)
377
+ if (p.animate.name !== 'spin' || p.animate.params.speed === 0 || _isInteracting)
362
378
  return;
363
- var frameSpeed = (p.spinSpeed || 0) / 1000;
379
+ var frameSpeed = p.animate.params.speed / 1000;
364
380
  _spinSpeed[0] = 60 * Math.min(Math.abs(deltaT), 1000 / 8) / 1000 * frameSpeed;
365
- if (!_isInteracting)
366
- linear_algebra_1.Vec2.add(_rotCurr, _rotPrev, _spinSpeed);
381
+ linear_algebra_1.Vec2.add(_rotCurr, _rotPrev, _spinSpeed);
382
+ }
383
+ var _rockPhase = 0;
384
+ var _rockSpeed = linear_algebra_1.Vec2.create(0.005, 0);
385
+ function rock(deltaT) {
386
+ if (p.animate.name !== 'rock' || p.animate.params.speed === 0 || _isInteracting)
387
+ return;
388
+ var dt = deltaT / 1000 * p.animate.params.speed;
389
+ var maxAngle = (0, misc_1.degToRad)(p.animate.params.angle) / getRotateFactor();
390
+ var angleA = Math.sin(_rockPhase * Math.PI * 2) * maxAngle;
391
+ var angleB = Math.sin((_rockPhase + dt) * Math.PI * 2) * maxAngle;
392
+ _rockSpeed[0] = angleB - angleA;
393
+ linear_algebra_1.Vec2.add(_rotCurr, _rotPrev, _rockSpeed);
394
+ _rockPhase += dt;
395
+ if (_rockPhase >= 1) {
396
+ _rockPhase = 0;
397
+ }
398
+ }
399
+ function resetRock() {
400
+ _rockPhase = 0;
367
401
  }
368
402
  function start(t) {
369
403
  lastUpdated = -1;
@@ -371,8 +405,13 @@ var TrackballControls;
371
405
  }
372
406
  return {
373
407
  viewport: viewport,
408
+ get isAnimating() { return p.animate.name !== 'off'; },
374
409
  get props() { return p; },
375
410
  setProps: function (props) {
411
+ var _a;
412
+ if (((_a = props.animate) === null || _a === void 0 ? void 0 : _a.name) === 'rock' && p.animate.name !== 'rock') {
413
+ resetRock(); // start rocking from the center
414
+ }
376
415
  Object.assign(p, props);
377
416
  },
378
417
  start: start,
@@ -18,6 +18,7 @@ var names_1 = require("../../mol-util/color/names");
18
18
  var sphere_2 = require("../../mol-geo/primitive/sphere");
19
19
  var mol_util_1 = require("../../mol-util");
20
20
  var geometry_2 = require("../../mol-geo/geometry/geometry");
21
+ var render_item_1 = require("../../mol-gl/webgl/render-item");
21
22
  exports.DebugHelperParams = {
22
23
  sceneBoundingSpheres: param_definition_1.ParamDefinition.Boolean(false, { description: 'Show full scene bounding spheres.' }),
23
24
  visibleSceneBoundingSpheres: param_definition_1.ParamDefinition.Boolean(false, { description: 'Show visible scene bounding spheres.' }),
@@ -28,7 +29,7 @@ var BoundingSphereHelper = /** @class */ (function () {
28
29
  function BoundingSphereHelper(ctx, parent, props) {
29
30
  this.objectsData = new Map();
30
31
  this.instancesData = new Map();
31
- this.scene = scene_1.Scene.create(ctx);
32
+ this.scene = scene_1.Scene.create(ctx, render_item_1.GraphicsRenderVariantsBlended);
32
33
  this.parent = parent;
33
34
  this._props = (0, tslib_1.__assign)((0, tslib_1.__assign)({}, param_definition_1.ParamDefinition.getDefaultValues(exports.DebugHelperParams)), props);
34
35
  }
@@ -151,6 +152,6 @@ var objectMaterialId = (0, render_object_1.getNextMaterialId)();
151
152
  var instanceMaterialId = (0, render_object_1.getNextMaterialId)();
152
153
  function createBoundingSphereRenderObject(mesh, color, materialId, transform) {
153
154
  var values = mesh_1.Mesh.Utils.createValuesSimple(mesh, { alpha: 0.1, doubleSided: false }, color, 1, transform);
154
- return (0, render_object_1.createRenderObject)('mesh', values, { disposed: false, visible: true, alphaFactor: 1, pickable: false, colorOnly: false, opaque: false, writeDepth: false, noClip: false }, materialId);
155
+ return (0, render_object_1.createRenderObject)('mesh', values, { disposed: false, visible: true, alphaFactor: 1, pickable: false, colorOnly: false, opaque: false, writeDepth: false }, materialId);
155
156
  }
156
157
  //# sourceMappingURL=bounding-sphere-helper.js.map
@@ -30,6 +30,10 @@ export declare const CameraHelperParams: {
30
30
  roughness: number;
31
31
  bumpiness: number;
32
32
  }>;
33
+ clip: PD.Normalize<{
34
+ variant: any;
35
+ objects: any;
36
+ }>;
33
37
  }>, "on">>;
34
38
  };
35
39
  export declare type CameraHelperParams = typeof CameraHelperParams;
@@ -14,6 +14,7 @@ var sphere_1 = require("../../mol-geo/geometry/mesh/builder/sphere");
14
14
  var mesh_1 = require("../../mol-geo/geometry/mesh/mesh");
15
15
  var mesh_builder_1 = require("../../mol-geo/geometry/mesh/mesh-builder");
16
16
  var scene_1 = require("../../mol-gl/scene");
17
+ var render_item_1 = require("../../mol-gl/webgl/render-item");
17
18
  var geometry_1 = require("../../mol-math/geometry");
18
19
  var linear_algebra_1 = require("../../mol-math/linear-algebra");
19
20
  var loci_1 = require("../../mol-model/loci");
@@ -55,7 +56,7 @@ var CameraHelper = /** @class */ (function () {
55
56
  }
56
57
  return changed;
57
58
  };
58
- this.scene = scene_1.Scene.create(webgl);
59
+ this.scene = scene_1.Scene.create(webgl, render_item_1.GraphicsRenderVariantsBlended);
59
60
  this.camera = new camera_1.Camera();
60
61
  linear_algebra_1.Vec3.set(this.camera.up, 0, 1, 0);
61
62
  linear_algebra_1.Vec3.set(this.camera.target, 0, 0, 0);
@@ -70,7 +71,6 @@ var CameraHelper = /** @class */ (function () {
70
71
  _this.scene.clear();
71
72
  var params = (0, tslib_1.__assign)((0, tslib_1.__assign)({}, props.axes.params), { scale: props.axes.params.scale * _this.webgl.pixelRatio });
72
73
  _this.renderObject = createAxesRenderObject(params);
73
- _this.renderObject.state.noClip = true;
74
74
  _this.scene.add(_this.renderObject);
75
75
  _this.scene.commit();
76
76
  linear_algebra_1.Vec3.set(_this.camera.position, 0, 0, params.scale * 200);
@@ -32,6 +32,10 @@ export declare const HandleHelperParams: {
32
32
  roughness: number;
33
33
  bumpiness: number;
34
34
  }>;
35
+ clip: PD.Normalize<{
36
+ variant: any;
37
+ objects: any;
38
+ }>;
35
39
  }>, "on">>;
36
40
  };
37
41
  export declare type HandleHelperParams = typeof HandleHelperParams;
@@ -23,6 +23,7 @@ var loci_1 = require("../../mol-model/loci");
23
23
  var marker_action_1 = require("../../mol-util/marker-action");
24
24
  var visual_1 = require("../../mol-repr/visual");
25
25
  var int_1 = require("../../mol-data/int");
26
+ var render_item_1 = require("../../mol-gl/webgl/render-item");
26
27
  var HandleParams = (0, tslib_1.__assign)((0, tslib_1.__assign)({}, mesh_1.Mesh.Params), { alpha: (0, tslib_1.__assign)((0, tslib_1.__assign)({}, mesh_1.Mesh.Params.alpha), { defaultValue: 1 }), ignoreLight: (0, tslib_1.__assign)((0, tslib_1.__assign)({}, mesh_1.Mesh.Params.ignoreLight), { defaultValue: true }), colorX: param_definition_1.ParamDefinition.Color(names_1.ColorNames.red, { isEssential: true }), colorY: param_definition_1.ParamDefinition.Color(names_1.ColorNames.green, { isEssential: true }), colorZ: param_definition_1.ParamDefinition.Color(names_1.ColorNames.blue, { isEssential: true }), scale: param_definition_1.ParamDefinition.Numeric(0.33, { min: 0.1, max: 2, step: 0.1 }, { isEssential: true }) });
27
28
  exports.HandleHelperParams = {
28
29
  handle: param_definition_1.ParamDefinition.MappedStatic('off', {
@@ -55,7 +56,7 @@ var HandleHelper = /** @class */ (function () {
55
56
  }
56
57
  return changed;
57
58
  };
58
- this.scene = scene_1.Scene.create(webgl);
59
+ this.scene = scene_1.Scene.create(webgl, render_item_1.GraphicsRenderVariantsBlended);
59
60
  this.setProps(props);
60
61
  }
61
62
  HandleHelper.prototype.getBoundingSphere = function (out, instanceId) {
@@ -75,7 +76,6 @@ var HandleHelper = /** @class */ (function () {
75
76
  _this.scene.clear();
76
77
  var params = (0, tslib_1.__assign)((0, tslib_1.__assign)({}, props.handle.params), { scale: props.handle.params.scale * _this.webgl.pixelRatio });
77
78
  _this.renderObject = createHandleRenderObject(params);
78
- _this.renderObject.state.noClip = true;
79
79
  _this.scene.add(_this.renderObject);
80
80
  _this.scene.commit();
81
81
  p.handle.params = (0, tslib_1.__assign)({}, props.handle.params);
@@ -37,6 +37,7 @@ export declare const HelperParams: {
37
37
  bumpAmplitude: any;
38
38
  quality: any;
39
39
  material: any;
40
+ clip: any;
40
41
  }>, "on">;
41
42
  }>>;
42
43
  };
@@ -68,6 +69,7 @@ export declare const DefaultHelperProps: PD.Values<{
68
69
  bumpAmplitude: any;
69
70
  quality: any;
70
71
  material: any;
72
+ clip: any;
71
73
  }>, "on">;
72
74
  }>>;
73
75
  }>;
@@ -14,6 +14,17 @@ import { Helper } from '../helper/helper';
14
14
  import { StereoCamera } from '../camera/stereo';
15
15
  import { PostprocessingPass, PostprocessingProps } from './postprocessing';
16
16
  import { MarkingProps } from './marking';
17
+ declare type Props = {
18
+ postprocessing: PostprocessingProps;
19
+ marking: MarkingProps;
20
+ transparentBackground: boolean;
21
+ };
22
+ declare type RenderContext = {
23
+ renderer: Renderer;
24
+ camera: Camera | StereoCamera;
25
+ scene: Scene;
26
+ helper: Helper;
27
+ };
17
28
  export declare class DrawPass {
18
29
  private webgl;
19
30
  private readonly drawTarget;
@@ -40,6 +51,7 @@ export declare class DrawPass {
40
51
  private _renderWboit;
41
52
  private _renderBlended;
42
53
  private _render;
43
- render(renderer: Renderer, camera: Camera | StereoCamera, scene: Scene, helper: Helper, toDrawingBuffer: boolean, transparentBackground: boolean, postprocessingProps: PostprocessingProps, markingProps: MarkingProps): void;
54
+ render(ctx: RenderContext, props: Props, toDrawingBuffer: boolean): void;
44
55
  getColorTarget(postprocessingProps: PostprocessingProps): RenderTarget;
45
56
  }
57
+ export {};
@@ -197,23 +197,23 @@ var DrawPass = /** @class */ (function () {
197
197
  }
198
198
  renderer.renderBlendedTransparent(scene.primitives, camera, null);
199
199
  };
200
- DrawPass.prototype._render = function (renderer, camera, scene, helper, toDrawingBuffer, transparentBackground, postprocessingProps, markingProps) {
200
+ DrawPass.prototype._render = function (renderer, camera, scene, helper, toDrawingBuffer, props) {
201
201
  var volumeRendering = scene.volumes.renderables.length > 0;
202
- var postprocessingEnabled = postprocessing_1.PostprocessingPass.isEnabled(postprocessingProps);
203
- var antialiasingEnabled = postprocessing_1.AntialiasingPass.isEnabled(postprocessingProps);
204
- var markingEnabled = marking_1.MarkingPass.isEnabled(markingProps);
202
+ var postprocessingEnabled = postprocessing_1.PostprocessingPass.isEnabled(props.postprocessing);
203
+ var antialiasingEnabled = postprocessing_1.AntialiasingPass.isEnabled(props.postprocessing);
204
+ var markingEnabled = marking_1.MarkingPass.isEnabled(props.marking);
205
205
  var _a = camera.viewport, x = _a.x, y = _a.y, width = _a.width, height = _a.height;
206
206
  renderer.setViewport(x, y, width, height);
207
207
  renderer.update(camera);
208
- if (transparentBackground && !antialiasingEnabled && toDrawingBuffer) {
208
+ if (props.transparentBackground && !antialiasingEnabled && toDrawingBuffer) {
209
209
  this.drawTarget.bind();
210
210
  renderer.clear(false);
211
211
  }
212
212
  if (this.wboitEnabled) {
213
- this._renderWboit(renderer, camera, scene, transparentBackground, postprocessingProps);
213
+ this._renderWboit(renderer, camera, scene, props.transparentBackground, props.postprocessing);
214
214
  }
215
215
  else {
216
- this._renderBlended(renderer, camera, scene, !volumeRendering && !postprocessingEnabled && !antialiasingEnabled && toDrawingBuffer, transparentBackground, postprocessingProps);
216
+ this._renderBlended(renderer, camera, scene, !volumeRendering && !postprocessingEnabled && !antialiasingEnabled && toDrawingBuffer, props.transparentBackground, props.postprocessing);
217
217
  }
218
218
  if (postprocessingEnabled) {
219
219
  this.postprocessing.target.bind();
@@ -225,7 +225,7 @@ var DrawPass = /** @class */ (function () {
225
225
  this.drawTarget.bind();
226
226
  }
227
227
  if (markingEnabled) {
228
- var markingDepthTest = markingProps.ghostEdgeStrength < 1;
228
+ var markingDepthTest = props.marking.ghostEdgeStrength < 1;
229
229
  if (markingDepthTest) {
230
230
  this.marking.depthTarget.bind();
231
231
  renderer.clear(false);
@@ -234,7 +234,7 @@ var DrawPass = /** @class */ (function () {
234
234
  this.marking.maskTarget.bind();
235
235
  renderer.clear(false);
236
236
  renderer.renderMarkingMask(scene.primitives, camera, markingDepthTest ? this.marking.depthTarget.texture : null);
237
- this.marking.update(markingProps);
237
+ this.marking.update(props.marking);
238
238
  this.marking.render(camera.viewport, postprocessingEnabled ? this.postprocessing.target : this.colorTarget);
239
239
  }
240
240
  if (helper.debug.isEnabled) {
@@ -250,7 +250,7 @@ var DrawPass = /** @class */ (function () {
250
250
  renderer.renderBlended(helper.camera.scene, helper.camera.camera, null);
251
251
  }
252
252
  if (antialiasingEnabled) {
253
- this.antialiasing.render(camera, toDrawingBuffer, postprocessingProps);
253
+ this.antialiasing.render(camera, toDrawingBuffer, props.postprocessing);
254
254
  }
255
255
  else if (toDrawingBuffer) {
256
256
  this.drawTarget.bind();
@@ -264,16 +264,17 @@ var DrawPass = /** @class */ (function () {
264
264
  }
265
265
  this.webgl.gl.flush();
266
266
  };
267
- DrawPass.prototype.render = function (renderer, camera, scene, helper, toDrawingBuffer, transparentBackground, postprocessingProps, markingProps) {
268
- renderer.setTransparentBackground(transparentBackground);
267
+ DrawPass.prototype.render = function (ctx, props, toDrawingBuffer) {
268
+ var renderer = ctx.renderer, camera = ctx.camera, scene = ctx.scene, helper = ctx.helper;
269
+ renderer.setTransparentBackground(props.transparentBackground);
269
270
  renderer.setDrawingBufferSize(this.colorTarget.getWidth(), this.colorTarget.getHeight());
270
271
  renderer.setPixelRatio(this.webgl.pixelRatio);
271
272
  if (stereo_1.StereoCamera.is(camera)) {
272
- this._render(renderer, camera.left, scene, helper, toDrawingBuffer, transparentBackground, postprocessingProps, markingProps);
273
- this._render(renderer, camera.right, scene, helper, toDrawingBuffer, transparentBackground, postprocessingProps, markingProps);
273
+ this._render(renderer, camera.left, scene, helper, toDrawingBuffer, props);
274
+ this._render(renderer, camera.right, scene, helper, toDrawingBuffer, props);
274
275
  }
275
276
  else {
276
- this._render(renderer, camera, scene, helper, toDrawingBuffer, transparentBackground, postprocessingProps, markingProps);
277
+ this._render(renderer, camera, scene, helper, toDrawingBuffer, props);
277
278
  }
278
279
  };
279
280
  DrawPass.prototype.getColorTarget = function (postprocessingProps) {
@@ -63,6 +63,7 @@ export declare const ImageParams: {
63
63
  bumpAmplitude: any;
64
64
  quality: any;
65
65
  material: any;
66
+ clip: any;
66
67
  }>, "on">;
67
68
  }>>;
68
69
  };
@@ -76,12 +76,13 @@ var ImagePass = /** @class */ (function () {
76
76
  camera_1.Camera.copySnapshot(this._camera.state, this.camera.state);
77
77
  util_1.Viewport.set(this._camera.viewport, 0, 0, this._width, this._height);
78
78
  this._camera.update();
79
+ var ctx = { renderer: this.renderer, camera: this._camera, scene: this.scene, helper: this.helper };
79
80
  if (multi_sample_1.MultiSamplePass.isEnabled(this.props.multiSample)) {
80
- this.multiSampleHelper.render(this.renderer, this._camera, this.scene, this.helper, false, this.props.transparentBackground, this.props);
81
+ this.multiSampleHelper.render(ctx, this.props, false);
81
82
  this._colorTarget = this.multiSamplePass.colorTarget;
82
83
  }
83
84
  else {
84
- this.drawPass.render(this.renderer, this._camera, this.scene, this.helper, false, this.props.transparentBackground, this.props.postprocessing, this.props.marking);
85
+ this.drawPass.render(ctx, this.props, false);
85
86
  this._colorTarget = this.drawPass.getColorTarget(this.props.postprocessing);
86
87
  }
87
88
  };
@@ -20,7 +20,7 @@ var overlay_frag_1 = require("../../mol-gl/shader/marking/overlay.frag");
20
20
  var color_1 = require("../../mol-util/color");
21
21
  var edge_frag_1 = require("../../mol-gl/shader/marking/edge.frag");
22
22
  exports.MarkingParams = {
23
- enabled: param_definition_1.ParamDefinition.Boolean(false),
23
+ enabled: param_definition_1.ParamDefinition.Boolean(true),
24
24
  highlightEdgeColor: param_definition_1.ParamDefinition.Color(color_1.Color.darken(color_1.Color.fromNormalizedRgb(1.0, 0.4, 0.6), 1.0)),
25
25
  selectEdgeColor: param_definition_1.ParamDefinition.Color(color_1.Color.darken(color_1.Color.fromNormalizedRgb(0.2, 1.0, 0.1), 1.0)),
26
26
  edgeScale: param_definition_1.ParamDefinition.Numeric(1, { min: 1, max: 3, step: 1 }, { description: 'Thickness of the edge.' }),