molstar 3.0.0-dev.0 → 3.0.0-dev.2

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (2946) hide show
  1. package/LICENSE +20 -20
  2. package/README.md +187 -176
  3. package/build/viewer/embedded.html +43 -43
  4. package/build/viewer/index.html +94 -94
  5. package/build/viewer/molstar.js +1 -1
  6. package/lib/apps/docking-viewer/index.html +36 -36
  7. package/lib/apps/docking-viewer/viewport.js +12 -10
  8. package/lib/apps/viewer/embedded.html +43 -43
  9. package/lib/apps/viewer/index.html +94 -94
  10. package/lib/commonjs/apps/docking-viewer/viewport.js +12 -10
  11. package/lib/commonjs/extensions/anvil/behavior.d.ts +4 -1
  12. package/lib/commonjs/extensions/anvil/representation.d.ts +5 -5
  13. package/lib/commonjs/extensions/cellpack/representation.d.ts +1 -1
  14. package/lib/commonjs/extensions/dnatco/confal-pyramids/representation.d.ts +3 -3
  15. package/lib/commonjs/extensions/rcsb/assembly-symmetry/behavior.d.ts +4 -1
  16. package/lib/commonjs/extensions/rcsb/assembly-symmetry/representation.d.ts +1 -1
  17. package/lib/commonjs/extensions/rcsb/validation-report/representation.d.ts +5 -5
  18. package/lib/commonjs/mol-canvas3d/helper/camera-helper.d.ts +4 -1
  19. package/lib/commonjs/mol-canvas3d/helper/handle-helper.d.ts +4 -1
  20. package/lib/commonjs/mol-geo/geometry/base.d.ts +1 -2
  21. package/lib/commonjs/mol-geo/geometry/base.js +4 -6
  22. package/lib/commonjs/mol-geo/geometry/cylinders/cylinders.d.ts +1 -1
  23. package/lib/commonjs/mol-geo/geometry/direct-volume/direct-volume.d.ts +1 -1
  24. package/lib/commonjs/mol-geo/geometry/image/image.d.ts +1 -1
  25. package/lib/commonjs/mol-geo/geometry/lines/lines.d.ts +1 -1
  26. package/lib/commonjs/mol-geo/geometry/mesh/mesh.d.ts +1 -1
  27. package/lib/commonjs/mol-geo/geometry/points/points.d.ts +1 -1
  28. package/lib/commonjs/mol-geo/geometry/spheres/spheres.d.ts +1 -1
  29. package/lib/commonjs/mol-geo/geometry/text/text.d.ts +1 -1
  30. package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.d.ts +1 -1
  31. package/lib/commonjs/mol-model-formats/shape/ply.d.ts +2 -2
  32. package/lib/commonjs/mol-model-props/computed/representations/interactions-inter-unit-cylinder.d.ts +1 -1
  33. package/lib/commonjs/mol-model-props/computed/representations/interactions-intra-unit-cylinder.d.ts +1 -1
  34. package/lib/commonjs/mol-model-props/computed/representations/interactions.d.ts +3 -3
  35. package/lib/commonjs/mol-model-props/integrative/cross-link-restraint/representation.d.ts +4 -4
  36. package/lib/commonjs/mol-plugin/behavior/dynamic/selection/structure-focus-representation.d.ts +1 -2
  37. package/lib/commonjs/mol-plugin/behavior/dynamic/volume-streaming/model.d.ts +2 -3
  38. package/lib/commonjs/mol-plugin/commands.d.ts +4 -0
  39. package/lib/commonjs/mol-plugin/state.d.ts +8 -0
  40. package/lib/commonjs/mol-plugin/state.js +27 -17
  41. package/lib/commonjs/mol-plugin/util/viewport-screenshot.d.ts +12 -3
  42. package/lib/commonjs/mol-plugin-state/helpers/structure-substance.d.ts +1 -1
  43. package/lib/commonjs/mol-plugin-state/helpers/structure-substance.js +2 -2
  44. package/lib/commonjs/mol-plugin-state/manager/structure/component.d.ts +5 -3
  45. package/lib/commonjs/mol-plugin-state/manager/structure/component.js +1 -1
  46. package/lib/commonjs/mol-plugin-state/transforms/representation.d.ts +40 -11
  47. package/lib/commonjs/mol-plugin-state/transforms/representation.js +2 -2
  48. package/lib/commonjs/mol-plugin-ui/controls/parameters.d.ts +8 -2
  49. package/lib/commonjs/mol-plugin-ui/controls/parameters.js +15 -3
  50. package/lib/commonjs/mol-repr/shape/loci/angle.d.ts +1 -1
  51. package/lib/commonjs/mol-repr/shape/loci/common.d.ts +1 -1
  52. package/lib/commonjs/mol-repr/shape/loci/dihedral.d.ts +1 -1
  53. package/lib/commonjs/mol-repr/shape/loci/distance.d.ts +1 -1
  54. package/lib/commonjs/mol-repr/shape/loci/label.d.ts +1 -1
  55. package/lib/commonjs/mol-repr/shape/loci/orientation.d.ts +1 -1
  56. package/lib/commonjs/mol-repr/shape/loci/plane.d.ts +1 -1
  57. package/lib/commonjs/mol-repr/shape/model/unitcell.d.ts +1 -1
  58. package/lib/commonjs/mol-repr/structure/complex-visual.d.ts +6 -6
  59. package/lib/commonjs/mol-repr/structure/params.d.ts +8 -8
  60. package/lib/commonjs/mol-repr/structure/registry.d.ts +14 -14
  61. package/lib/commonjs/mol-repr/structure/representation/backbone.d.ts +3 -3
  62. package/lib/commonjs/mol-repr/structure/representation/ball-and-stick.d.ts +3 -3
  63. package/lib/commonjs/mol-repr/structure/representation/carbohydrate.d.ts +3 -3
  64. package/lib/commonjs/mol-repr/structure/representation/cartoon.d.ts +3 -3
  65. package/lib/commonjs/mol-repr/structure/representation/ellipsoid.d.ts +3 -3
  66. package/lib/commonjs/mol-repr/structure/representation/gaussian-surface.d.ts +3 -3
  67. package/lib/commonjs/mol-repr/structure/representation/gaussian-volume.d.ts +3 -3
  68. package/lib/commonjs/mol-repr/structure/representation/label.d.ts +3 -3
  69. package/lib/commonjs/mol-repr/structure/representation/line.d.ts +3 -3
  70. package/lib/commonjs/mol-repr/structure/representation/molecular-surface.d.ts +3 -3
  71. package/lib/commonjs/mol-repr/structure/representation/orientation.d.ts +3 -3
  72. package/lib/commonjs/mol-repr/structure/representation/point.d.ts +3 -3
  73. package/lib/commonjs/mol-repr/structure/representation/putty.d.ts +3 -3
  74. package/lib/commonjs/mol-repr/structure/representation/spacefill.d.ts +3 -3
  75. package/lib/commonjs/mol-repr/structure/units-visual.d.ts +8 -8
  76. package/lib/commonjs/mol-repr/structure/visual/bond-inter-unit-cylinder.d.ts +2 -2
  77. package/lib/commonjs/mol-repr/structure/visual/bond-inter-unit-line.d.ts +1 -1
  78. package/lib/commonjs/mol-repr/structure/visual/bond-intra-unit-cylinder.d.ts +2 -2
  79. package/lib/commonjs/mol-repr/structure/visual/bond-intra-unit-line.d.ts +1 -1
  80. package/lib/commonjs/mol-repr/structure/visual/carbohydrate-link-cylinder.d.ts +1 -1
  81. package/lib/commonjs/mol-repr/structure/visual/carbohydrate-symbol-mesh.d.ts +1 -1
  82. package/lib/commonjs/mol-repr/structure/visual/carbohydrate-terminal-link-cylinder.d.ts +1 -1
  83. package/lib/commonjs/mol-repr/structure/visual/element-cross.d.ts +1 -1
  84. package/lib/commonjs/mol-repr/structure/visual/element-point.d.ts +1 -1
  85. package/lib/commonjs/mol-repr/structure/visual/element-sphere.d.ts +2 -2
  86. package/lib/commonjs/mol-repr/structure/visual/ellipsoid-mesh.d.ts +1 -1
  87. package/lib/commonjs/mol-repr/structure/visual/gaussian-density-volume.d.ts +2 -2
  88. package/lib/commonjs/mol-repr/structure/visual/gaussian-surface-mesh.d.ts +4 -4
  89. package/lib/commonjs/mol-repr/structure/visual/gaussian-surface-wireframe.d.ts +1 -1
  90. package/lib/commonjs/mol-repr/structure/visual/label-text.d.ts +1 -1
  91. package/lib/commonjs/mol-repr/structure/visual/molecular-surface-mesh.d.ts +1 -1
  92. package/lib/commonjs/mol-repr/structure/visual/molecular-surface-wireframe.d.ts +1 -1
  93. package/lib/commonjs/mol-repr/structure/visual/nucleotide-block-mesh.d.ts +1 -1
  94. package/lib/commonjs/mol-repr/structure/visual/nucleotide-ring-mesh.d.ts +1 -1
  95. package/lib/commonjs/mol-repr/structure/visual/orientation-ellipsoid-mesh.d.ts +1 -1
  96. package/lib/commonjs/mol-repr/structure/visual/polymer-backbone-cylinder.d.ts +2 -2
  97. package/lib/commonjs/mol-repr/structure/visual/polymer-backbone-sphere.d.ts +2 -2
  98. package/lib/commonjs/mol-repr/structure/visual/polymer-direction-wedge.d.ts +1 -1
  99. package/lib/commonjs/mol-repr/structure/visual/polymer-gap-cylinder.d.ts +1 -1
  100. package/lib/commonjs/mol-repr/structure/visual/polymer-trace-mesh.d.ts +1 -1
  101. package/lib/commonjs/mol-repr/structure/visual/polymer-tube-mesh.d.ts +1 -1
  102. package/lib/commonjs/mol-repr/volume/direct-volume.d.ts +3 -3
  103. package/lib/commonjs/mol-repr/volume/isosurface.d.ts +6 -6
  104. package/lib/commonjs/mol-repr/volume/registry.d.ts +3 -3
  105. package/lib/commonjs/mol-repr/volume/representation.d.ts +1 -1
  106. package/lib/commonjs/mol-repr/volume/slice.d.ts +3 -3
  107. package/lib/commonjs/mol-script/language/builder.d.ts +1 -0
  108. package/lib/commonjs/mol-theme/substance.js +18 -9
  109. package/lib/commonjs/mol-util/material.d.ts +13 -16
  110. package/lib/commonjs/mol-util/material.js +17 -27
  111. package/lib/commonjs/mol-util/param-definition.d.ts +2 -0
  112. package/lib/commonjs/mol-util/param-definition.js +2 -0
  113. package/lib/examples/alpha-orbitals/index.html +60 -60
  114. package/lib/examples/basic-wrapper/index.html +136 -136
  115. package/lib/examples/lighting/index.html +86 -86
  116. package/lib/examples/proteopedia-wrapper/index.html +235 -235
  117. package/lib/extensions/anvil/behavior.d.ts +4 -1
  118. package/lib/extensions/anvil/representation.d.ts +5 -5
  119. package/lib/extensions/cellpack/representation.d.ts +1 -1
  120. package/lib/extensions/dnatco/confal-pyramids/representation.d.ts +3 -3
  121. package/lib/extensions/rcsb/assembly-symmetry/behavior.d.ts +4 -1
  122. package/lib/extensions/rcsb/assembly-symmetry/representation.d.ts +1 -1
  123. package/lib/extensions/rcsb/validation-report/representation.d.ts +5 -5
  124. package/lib/mol-canvas3d/helper/camera-helper.d.ts +4 -1
  125. package/lib/mol-canvas3d/helper/handle-helper.d.ts +4 -1
  126. package/lib/mol-geo/geometry/base.d.ts +1 -2
  127. package/lib/mol-geo/geometry/base.js +4 -6
  128. package/lib/mol-geo/geometry/cylinders/cylinders.d.ts +1 -1
  129. package/lib/mol-geo/geometry/direct-volume/direct-volume.d.ts +1 -1
  130. package/lib/mol-geo/geometry/image/image.d.ts +1 -1
  131. package/lib/mol-geo/geometry/lines/lines.d.ts +1 -1
  132. package/lib/mol-geo/geometry/mesh/mesh.d.ts +1 -1
  133. package/lib/mol-geo/geometry/points/points.d.ts +1 -1
  134. package/lib/mol-geo/geometry/spheres/spheres.d.ts +1 -1
  135. package/lib/mol-geo/geometry/text/text.d.ts +1 -1
  136. package/lib/mol-geo/geometry/texture-mesh/texture-mesh.d.ts +1 -1
  137. package/lib/mol-model-formats/shape/ply.d.ts +2 -2
  138. package/lib/mol-model-props/computed/representations/interactions-inter-unit-cylinder.d.ts +1 -1
  139. package/lib/mol-model-props/computed/representations/interactions-intra-unit-cylinder.d.ts +1 -1
  140. package/lib/mol-model-props/computed/representations/interactions.d.ts +3 -3
  141. package/lib/mol-model-props/integrative/cross-link-restraint/representation.d.ts +4 -4
  142. package/lib/mol-plugin/behavior/dynamic/selection/structure-focus-representation.d.ts +1 -2
  143. package/lib/mol-plugin/behavior/dynamic/volume-streaming/model.d.ts +2 -3
  144. package/lib/mol-plugin/commands.d.ts +4 -0
  145. package/lib/mol-plugin/state.d.ts +8 -0
  146. package/lib/mol-plugin/state.js +27 -17
  147. package/lib/mol-plugin/util/viewport-screenshot.d.ts +12 -3
  148. package/lib/mol-plugin/version.js +2 -2
  149. package/lib/mol-plugin-state/helpers/structure-substance.d.ts +1 -1
  150. package/lib/mol-plugin-state/helpers/structure-substance.js +2 -2
  151. package/lib/mol-plugin-state/manager/structure/component.d.ts +5 -3
  152. package/lib/mol-plugin-state/manager/structure/component.js +1 -1
  153. package/lib/mol-plugin-state/transforms/representation.d.ts +40 -11
  154. package/lib/mol-plugin-state/transforms/representation.js +2 -2
  155. package/lib/mol-plugin-ui/controls/parameters.d.ts +8 -2
  156. package/lib/mol-plugin-ui/controls/parameters.js +16 -4
  157. package/lib/mol-plugin-ui/skin/base/base.scss +32 -32
  158. package/lib/mol-plugin-ui/skin/base/components/controls-base.scss +333 -333
  159. package/lib/mol-plugin-ui/skin/base/components/controls.scss +418 -418
  160. package/lib/mol-plugin-ui/skin/base/components/help.scss +27 -27
  161. package/lib/mol-plugin-ui/skin/base/components/line-graph.scss +67 -67
  162. package/lib/mol-plugin-ui/skin/base/components/log.scss +100 -100
  163. package/lib/mol-plugin-ui/skin/base/components/misc.scss +616 -616
  164. package/lib/mol-plugin-ui/skin/base/components/sequence.scss +125 -125
  165. package/lib/mol-plugin-ui/skin/base/components/slider.scss +165 -165
  166. package/lib/mol-plugin-ui/skin/base/components/tasks.scss +99 -99
  167. package/lib/mol-plugin-ui/skin/base/components/toast.scss +83 -83
  168. package/lib/mol-plugin-ui/skin/base/components/transformer.scss +163 -163
  169. package/lib/mol-plugin-ui/skin/base/components/viewport.scss +127 -127
  170. package/lib/mol-plugin-ui/skin/base/layout/common.scss +71 -71
  171. package/lib/mol-plugin-ui/skin/base/layout/controls-landscape.scss +89 -89
  172. package/lib/mol-plugin-ui/skin/base/layout/controls-outside.scss +98 -98
  173. package/lib/mol-plugin-ui/skin/base/layout/controls-portrait.scss +108 -108
  174. package/lib/mol-plugin-ui/skin/base/layout.scss +40 -40
  175. package/lib/mol-plugin-ui/skin/base/logo.scss +12 -12
  176. package/lib/mol-plugin-ui/skin/base/normalize.scss +209 -209
  177. package/lib/mol-plugin-ui/skin/base/ui.scss +40 -40
  178. package/lib/mol-plugin-ui/skin/base/variables.scss +85 -85
  179. package/lib/mol-plugin-ui/skin/blue.scss +1 -1
  180. package/lib/mol-plugin-ui/skin/colors/blue.scss +23 -23
  181. package/lib/mol-plugin-ui/skin/colors/dark.scss +23 -23
  182. package/lib/mol-plugin-ui/skin/colors/light.scss +29 -29
  183. package/lib/mol-plugin-ui/skin/dark.scss +1 -1
  184. package/lib/mol-plugin-ui/skin/light.scss +1 -1
  185. package/lib/mol-repr/shape/loci/angle.d.ts +1 -1
  186. package/lib/mol-repr/shape/loci/common.d.ts +1 -1
  187. package/lib/mol-repr/shape/loci/dihedral.d.ts +1 -1
  188. package/lib/mol-repr/shape/loci/distance.d.ts +1 -1
  189. package/lib/mol-repr/shape/loci/label.d.ts +1 -1
  190. package/lib/mol-repr/shape/loci/orientation.d.ts +1 -1
  191. package/lib/mol-repr/shape/loci/plane.d.ts +1 -1
  192. package/lib/mol-repr/shape/model/unitcell.d.ts +1 -1
  193. package/lib/mol-repr/structure/complex-visual.d.ts +6 -6
  194. package/lib/mol-repr/structure/params.d.ts +8 -8
  195. package/lib/mol-repr/structure/registry.d.ts +14 -14
  196. package/lib/mol-repr/structure/representation/backbone.d.ts +3 -3
  197. package/lib/mol-repr/structure/representation/ball-and-stick.d.ts +3 -3
  198. package/lib/mol-repr/structure/representation/carbohydrate.d.ts +3 -3
  199. package/lib/mol-repr/structure/representation/cartoon.d.ts +3 -3
  200. package/lib/mol-repr/structure/representation/ellipsoid.d.ts +3 -3
  201. package/lib/mol-repr/structure/representation/gaussian-surface.d.ts +3 -3
  202. package/lib/mol-repr/structure/representation/gaussian-volume.d.ts +3 -3
  203. package/lib/mol-repr/structure/representation/label.d.ts +3 -3
  204. package/lib/mol-repr/structure/representation/line.d.ts +3 -3
  205. package/lib/mol-repr/structure/representation/molecular-surface.d.ts +3 -3
  206. package/lib/mol-repr/structure/representation/orientation.d.ts +3 -3
  207. package/lib/mol-repr/structure/representation/point.d.ts +3 -3
  208. package/lib/mol-repr/structure/representation/putty.d.ts +3 -3
  209. package/lib/mol-repr/structure/representation/spacefill.d.ts +3 -3
  210. package/lib/mol-repr/structure/units-visual.d.ts +8 -8
  211. package/lib/mol-repr/structure/visual/bond-inter-unit-cylinder.d.ts +2 -2
  212. package/lib/mol-repr/structure/visual/bond-inter-unit-line.d.ts +1 -1
  213. package/lib/mol-repr/structure/visual/bond-intra-unit-cylinder.d.ts +2 -2
  214. package/lib/mol-repr/structure/visual/bond-intra-unit-line.d.ts +1 -1
  215. package/lib/mol-repr/structure/visual/carbohydrate-link-cylinder.d.ts +1 -1
  216. package/lib/mol-repr/structure/visual/carbohydrate-symbol-mesh.d.ts +1 -1
  217. package/lib/mol-repr/structure/visual/carbohydrate-terminal-link-cylinder.d.ts +1 -1
  218. package/lib/mol-repr/structure/visual/element-cross.d.ts +1 -1
  219. package/lib/mol-repr/structure/visual/element-point.d.ts +1 -1
  220. package/lib/mol-repr/structure/visual/element-sphere.d.ts +2 -2
  221. package/lib/mol-repr/structure/visual/ellipsoid-mesh.d.ts +1 -1
  222. package/lib/mol-repr/structure/visual/gaussian-density-volume.d.ts +2 -2
  223. package/lib/mol-repr/structure/visual/gaussian-surface-mesh.d.ts +4 -4
  224. package/lib/mol-repr/structure/visual/gaussian-surface-wireframe.d.ts +1 -1
  225. package/lib/mol-repr/structure/visual/label-text.d.ts +1 -1
  226. package/lib/mol-repr/structure/visual/molecular-surface-mesh.d.ts +1 -1
  227. package/lib/mol-repr/structure/visual/molecular-surface-wireframe.d.ts +1 -1
  228. package/lib/mol-repr/structure/visual/nucleotide-block-mesh.d.ts +1 -1
  229. package/lib/mol-repr/structure/visual/nucleotide-ring-mesh.d.ts +1 -1
  230. package/lib/mol-repr/structure/visual/orientation-ellipsoid-mesh.d.ts +1 -1
  231. package/lib/mol-repr/structure/visual/polymer-backbone-cylinder.d.ts +2 -2
  232. package/lib/mol-repr/structure/visual/polymer-backbone-sphere.d.ts +2 -2
  233. package/lib/mol-repr/structure/visual/polymer-direction-wedge.d.ts +1 -1
  234. package/lib/mol-repr/structure/visual/polymer-gap-cylinder.d.ts +1 -1
  235. package/lib/mol-repr/structure/visual/polymer-trace-mesh.d.ts +1 -1
  236. package/lib/mol-repr/structure/visual/polymer-tube-mesh.d.ts +1 -1
  237. package/lib/mol-repr/volume/direct-volume.d.ts +3 -3
  238. package/lib/mol-repr/volume/isosurface.d.ts +6 -6
  239. package/lib/mol-repr/volume/registry.d.ts +3 -3
  240. package/lib/mol-repr/volume/representation.d.ts +1 -1
  241. package/lib/mol-repr/volume/slice.d.ts +3 -3
  242. package/lib/mol-script/language/builder.d.ts +1 -0
  243. package/lib/mol-theme/substance.js +18 -9
  244. package/lib/mol-util/material.d.ts +13 -16
  245. package/lib/mol-util/material.js +17 -27
  246. package/lib/mol-util/param-definition.d.ts +2 -0
  247. package/lib/mol-util/param-definition.js +2 -0
  248. package/package.json +160 -158
  249. package/lib/apps/docking-viewer/index.js.map +0 -1
  250. package/lib/apps/docking-viewer/viewport.js.map +0 -1
  251. package/lib/apps/viewer/index.js.map +0 -1
  252. package/lib/cli/chem-comp-dict/create-ions.js.map +0 -1
  253. package/lib/cli/chem-comp-dict/create-table.js.map +0 -1
  254. package/lib/cli/chem-comp-dict/util.js.map +0 -1
  255. package/lib/cli/cif2bcif/converter.js.map +0 -1
  256. package/lib/cli/cif2bcif/index.js.map +0 -1
  257. package/lib/cli/cifschema/index.js.map +0 -1
  258. package/lib/cli/cifschema/util/cif-dic.js.map +0 -1
  259. package/lib/cli/cifschema/util/generate.js.map +0 -1
  260. package/lib/cli/cifschema/util/helper.js.map +0 -1
  261. package/lib/cli/cifschema/util/schema.js.map +0 -1
  262. package/lib/cli/lipid-params/index.js.map +0 -1
  263. package/lib/cli/state-docs/index.js.map +0 -1
  264. package/lib/cli/state-docs/pd-to-md.js.map +0 -1
  265. package/lib/cli/structure-info/helpers.js.map +0 -1
  266. package/lib/cli/structure-info/model.js.map +0 -1
  267. package/lib/cli/structure-info/volume.js.map +0 -1
  268. package/lib/commonjs/apps/docking-viewer/index.js.map +0 -1
  269. package/lib/commonjs/apps/docking-viewer/viewport.js.map +0 -1
  270. package/lib/commonjs/apps/viewer/index.js.map +0 -1
  271. package/lib/commonjs/cli/chem-comp-dict/create-ions.js.map +0 -1
  272. package/lib/commonjs/cli/chem-comp-dict/create-table.js.map +0 -1
  273. package/lib/commonjs/cli/chem-comp-dict/util.js.map +0 -1
  274. package/lib/commonjs/cli/cif2bcif/converter.js.map +0 -1
  275. package/lib/commonjs/cli/cif2bcif/index.js.map +0 -1
  276. package/lib/commonjs/cli/cifschema/index.js.map +0 -1
  277. package/lib/commonjs/cli/cifschema/util/cif-dic.js.map +0 -1
  278. package/lib/commonjs/cli/cifschema/util/generate.js.map +0 -1
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package/lib/commonjs/mol-canvas3d/helper/bounding-sphere-helper.js.map DELETED
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package/lib/commonjs/mol-canvas3d/helper/handle-helper.js.map DELETED
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package/lib/commonjs/mol-canvas3d/passes/draw.js.map DELETED
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package/lib/commonjs/mol-canvas3d/passes/fxaa.js.map DELETED
@@ -1 +0,0 @@
1
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package/lib/commonjs/mol-canvas3d/passes/postprocessing.js.map DELETED
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1
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package/lib/commonjs/mol-canvas3d/passes/smaa.js.map DELETED
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1
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package/lib/commonjs/mol-canvas3d/passes/wboit.js.map DELETED
@@ -1 +0,0 @@
1
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package/lib/commonjs/mol-canvas3d/util.js.map DELETED
@@ -1 +0,0 @@
1
- {"version":3,"file":"util.js","sourceRoot":"","sources":["../../../src/mol-canvas3d/util.ts"],"names":[],"mappings":";AAAA;;;;GAIG;;;;AAEH,6DAA6D;AAC7D,SAAgB,aAAa,CAAC,MAAyB,EAAE,KAAa,EAAE,MAAc,EAAE,KAAS;IAAT,sBAAA,EAAA,SAAS;IAC7F,MAAM,CAAC,KAAK,GAAG,IAAI,CAAC,KAAK,CAAC,MAAM,CAAC,gBAAgB,GAAG,KAAK,GAAG,KAAK,CAAC,CAAC;IACnE,MAAM,CAAC,MAAM,GAAG,IAAI,CAAC,KAAK,CAAC,MAAM,CAAC,gBAAgB,GAAG,KAAK,GAAG,MAAM,CAAC,CAAC;IACrE,MAAM,CAAC,MAAM,CAAC,MAAM,CAAC,KAAK,EAAE,EAAE,KAAK,EAAE,UAAG,KAAK,OAAI,EAAE,MAAM,EAAE,UAAG,MAAM,OAAI,EAAE,CAAC,CAAC;AAChF,CAAC;AAJD,sCAIC;AAED,gFAAgF;AAChF,SAAgB,YAAY,CAAC,MAAyB,EAAE,SAAsB,EAAE,KAAS;IAAT,sBAAA,EAAA,SAAS;IACrF,IAAI,KAAK,GAAG,MAAM,CAAC,UAAU,CAAC;IAC9B,IAAI,MAAM,GAAG,MAAM,CAAC,WAAW,CAAC;IAChC,IAAI,SAAS,KAAK,QAAQ,CAAC,IAAI,EAAE;QAC7B,8GAA8G;QAC9G,KAAK,GAAG,SAAS,CAAC,WAAW,CAAC;QAC9B,MAAM,GAAG,SAAS,CAAC,YAAY,CAAC;KACnC;IACD,aAAa,CAAC,MAAM,EAAE,KAAK,EAAE,MAAM,EAAE,KAAK,CAAC,CAAC;AAChD,CAAC;AATD,oCASC;AAED,SAAS,aAAa,CAAC,MAAyB,EAAE,QAAsB,EAAE,IAAa,EAAE,OAAa;IAClG,IAAM,GAAG,GAAG,IAAI,CAAC,MAAM,CAAC,SAAS,CAAC,IAAI,EAAE,OAAO,CAAC,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;IAChE,IAAM,GAAG,GAAG,GAAG,CAAC,MAAM,CAAC;IACvB,IAAM,KAAK,GAAG,GAAG,IAAI,CAAC,CAAC;IACvB,IAAM,EAAE,GAAG,IAAI,UAAU,CAAC,GAAG,CAAC,CAAC;IAC/B,IAAM,GAAG,GAAG,IAAI,WAAW,CAAC,EAAE,CAAC,MAAM,EAAE,CAAC,EAAE,KAAK,CAAC,CAAC;IAEjD,IAAI,CAAC,GAAG,CAAC,CAAC;IACV,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,KAAK,EAAE,EAAE,CAAC,EAAE;QAC5B,GAAG,CAAC,CAAC,CAAC,GAAG,GAAG,CAAC,UAAU,CAAC,CAAC,EAAE,CAAC;YACxB,GAAG,CAAC,UAAU,CAAC,CAAC,EAAE,CAAC,IAAI,CAAC;YACxB,GAAG,CAAC,UAAU,CAAC,CAAC,EAAE,CAAC,IAAI,EAAE;YACzB,GAAG,CAAC,UAAU,CAAC,CAAC,EAAE,CAAC,IAAI,EAAE,CAAC;KACjC;IAED,IAAI,UAAU,GAAG,GAAG,GAAG,CAAC,CAAC;IACzB,OAAO,UAAU,EAAE;QAAE,EAAE,CAAC,CAAC,CAAC,GAAG,GAAG,CAAC,UAAU,CAAC,CAAC,EAAE,CAAC,CAAC;IAEjD,QAAQ,CAAC,IAAI,IAAI,CAAC,CAAC,EAAE,CAAC,EAAE,EAAE,IAAI,EAAE,IAAI,IAAI,WAAW,EAAE,CAAC,CAAC,CAAC;AAC5D,CAAC;AAED,SAAsB,YAAY,CAAC,MAAyB,EAAE,IAAa,EAAE,OAAa;;;YACtF,sBAAO,IAAI,OAAO,CAAC,UAAC,OAAO,EAAE,MAAM;oBAC/B,IAAM,QAAQ,GAAG,UAAC,IAAiB;wBAC/B,IAAI,IAAI;4BAAE,OAAO,CAAC,IAAI,CAAC,CAAC;;4BACnB,MAAM,CAAC,kBAAkB,CAAC,CAAC;oBACpC,CAAC,CAAC;oBAEF,IAAI,CAAC,iBAAiB,CAAC,SAAS,CAAC,MAAM,EAAE;wBACrC,aAAa,CAAC,MAAM,EAAE,QAAQ,EAAE,IAAI,EAAE,OAAO,CAAC,CAAC;qBAClD;yBAAM;wBACH,MAAM,CAAC,MAAM,CAAC,QAAQ,EAAE,IAAI,EAAE,OAAO,CAAC,CAAC;qBAC1C;gBACL,CAAC,CAAC,EAAC;;;CACN;AAbD,oCAaC"}
package/lib/commonjs/mol-data/_spec/equiv-index.spec.d.ts DELETED
@@ -1,6 +0,0 @@
1
- /**
2
- * Copyright (c) 2017 mol* contributors, licensed under MIT, See LICENSE file for more info.
3
- *
4
- * @author David Sehnal <david.sehnal@gmail.com>
5
- */
6
- export {};
package/lib/commonjs/mol-data/_spec/equiv-index.spec.js DELETED
@@ -1,19 +0,0 @@
1
- "use strict";
2
- /**
3
- * Copyright (c) 2017 mol* contributors, licensed under MIT, See LICENSE file for more info.
4
- *
5
- * @author David Sehnal <david.sehnal@gmail.com>
6
- */
7
- Object.defineProperty(exports, "__esModule", { value: true });
8
- var util_1 = require("../util");
9
- describe('equiv-classes', function () {
10
- it('integer mod classes', function () {
11
- var cls = (0, util_1.EquivalenceClasses)(function (x) { return x % 2; }, function (a, b) { return (a - b) % 2 === 0; });
12
- for (var i = 0; i < 6; i++)
13
- cls.add(i, i);
14
- expect(cls.groups.length).toBe(2);
15
- expect(cls.groups[0]).toEqual([0, 2, 4]);
16
- expect(cls.groups[1]).toEqual([1, 3, 5]);
17
- });
18
- });
19
- //# sourceMappingURL=equiv-index.spec.js.map
package/lib/commonjs/mol-data/_spec/equiv-index.spec.js.map DELETED
@@ -1 +0,0 @@
1
- {"version":3,"file":"equiv-index.spec.js","sourceRoot":"","sources":["../../../../src/mol-data/_spec/equiv-index.spec.ts"],"names":[],"mappings":";AAAA;;;;GAIG;;AAEH,gCAA6C;AAE7C,QAAQ,CAAC,eAAe,EAAE;IACtB,EAAE,CAAC,qBAAqB,EAAE;QACtB,IAAM,GAAG,GAAG,IAAA,yBAAkB,EAAiB,UAAA,CAAC,IAAI,OAAA,CAAC,GAAG,CAAC,EAAL,CAAK,EAAE,UAAC,CAAC,EAAE,CAAC,IAAK,OAAA,CAAC,CAAC,GAAG,CAAC,CAAC,GAAG,CAAC,KAAK,CAAC,EAAjB,CAAiB,CAAC,CAAC;QACxF,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,CAAC,EAAE,CAAC,EAAE;YAAE,GAAG,CAAC,GAAG,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC;QAE1C,MAAM,CAAC,GAAG,CAAC,MAAM,CAAC,MAAM,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;QAClC,MAAM,CAAC,GAAG,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC;QACzC,MAAM,CAAC,GAAG,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC;IAC7C,CAAC,CAAC,CAAC;AACP,CAAC,CAAC,CAAC"}
package/lib/commonjs/mol-data/_spec/iterators.spec.d.ts DELETED
@@ -1,6 +0,0 @@
1
- /**
2
- * Copyright (c) 2017 mol* contributors, licensed under MIT, See LICENSE file for more info.
3
- *
4
- * @author David Sehnal <david.sehnal@gmail.com>
5
- */
6
- export {};
package/lib/commonjs/mol-data/_spec/iterators.spec.js DELETED
@@ -1,30 +0,0 @@
1
- "use strict";
2
- /**
3
- * Copyright (c) 2017 mol* contributors, licensed under MIT, See LICENSE file for more info.
4
- *
5
- * @author David Sehnal <david.sehnal@gmail.com>
6
- */
7
- Object.defineProperty(exports, "__esModule", { value: true });
8
- var iterator_1 = require("../iterator");
9
- function iteratorToArray(it) {
10
- var ret = [];
11
- while (it.hasNext) {
12
- var v = it.move();
13
- ret[ret.length] = v;
14
- }
15
- return ret;
16
- }
17
- describe('basic iterators', function () {
18
- function check(name, iter, expected) {
19
- it(name, function () {
20
- expect(iteratorToArray(iter)).toEqual(expected);
21
- });
22
- }
23
- check('empty', iterator_1.Iterator.Empty, []);
24
- check('singleton', iterator_1.Iterator.Value(10), [10]);
25
- check('array', iterator_1.Iterator.Array([1, 2, 3]), [1, 2, 3]);
26
- check('range', iterator_1.Iterator.Range(0, 3), [0, 1, 2, 3]);
27
- check('map', iterator_1.Iterator.map(iterator_1.Iterator.Range(0, 1), function (x) { return x + 1; }), [1, 2]);
28
- check('filter', iterator_1.Iterator.filter(iterator_1.Iterator.Range(0, 3), function (x) { return x >= 2; }), [2, 3]);
29
- });
30
- //# sourceMappingURL=iterators.spec.js.map
package/lib/commonjs/mol-data/_spec/iterators.spec.js.map DELETED
@@ -1 +0,0 @@
1
- {"version":3,"file":"iterators.spec.js","sourceRoot":"","sources":["../../../../src/mol-data/_spec/iterators.spec.ts"],"names":[],"mappings":";AAAA;;;;GAIG;;AAEH,wCAAuC;AAEvC,SAAS,eAAe,CAAI,EAAe;IACvC,IAAM,GAAG,GAAG,EAAE,CAAC;IACf,OAAO,EAAE,CAAC,OAAO,EAAE;QACf,IAAM,CAAC,GAAG,EAAE,CAAC,IAAI,EAAE,CAAC;QACpB,GAAG,CAAC,GAAG,CAAC,MAAM,CAAC,GAAG,CAAC,CAAC;KACvB;IACD,OAAO,GAAG,CAAC;AACf,CAAC;AAED,QAAQ,CAAC,iBAAiB,EAAE;IACxB,SAAS,KAAK,CAAI,IAAY,EAAE,IAAiB,EAAE,QAAa;QAC5D,EAAE,CAAC,IAAI,EAAE;YACL,MAAM,CAAC,eAAe,CAAC,IAAI,CAAC,CAAC,CAAC,OAAO,CAAC,QAAQ,CAAC,CAAC;QACpD,CAAC,CAAC,CAAC;IACP,CAAC;IAED,KAAK,CAAC,OAAO,EAAE,mBAAQ,CAAC,KAAK,EAAE,EAAE,CAAC,CAAC;IACnC,KAAK,CAAC,WAAW,EAAE,mBAAQ,CAAC,KAAK,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,CAAC;IAC7C,KAAK,CAAC,OAAO,EAAE,mBAAQ,CAAC,KAAK,CAAC,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC;IACrD,KAAK,CAAC,OAAO,EAAE,mBAAQ,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,CAAC,EAAE,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC;IACnD,KAAK,CAAC,KAAK,EAAE,mBAAQ,CAAC,GAAG,CAAC,mBAAQ,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,CAAC,EAAE,UAAA,CAAC,IAAI,OAAA,CAAC,GAAG,CAAC,EAAL,CAAK,CAAC,EAAE,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC;IACrE,KAAK,CAAC,QAAQ,EAAE,mBAAQ,CAAC,MAAM,CAAC,mBAAQ,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,CAAC,EAAE,UAAA,CAAC,IAAI,OAAA,CAAC,IAAI,CAAC,EAAN,CAAM,CAAC,EAAE,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC;AAChF,CAAC,CAAC,CAAC"}
package/lib/commonjs/mol-data/_spec/sort.spec.d.ts DELETED
@@ -1,6 +0,0 @@
1
- /**
2
- * Copyright (c) 2017 mol* contributors, licensed under MIT, See LICENSE file for more info.
3
- *
4
- * @author David Sehnal <david.sehnal@gmail.com>
5
- */
6
- export {};
package/lib/commonjs/mol-data/_spec/sort.spec.js DELETED
@@ -1,90 +0,0 @@
1
- "use strict";
2
- /**
3
- * Copyright (c) 2017 mol* contributors, licensed under MIT, See LICENSE file for more info.
4
- *
5
- * @author David Sehnal <david.sehnal@gmail.com>
6
- */
7
- Object.defineProperty(exports, "__esModule", { value: true });
8
- var tslib_1 = require("tslib");
9
- var Sort = (0, tslib_1.__importStar)(require("../util/sort"));
10
- function shuffle(data, len, clone, swap) {
11
- if (swap === void 0) { swap = Sort.arraySwap; }
12
- var a = clone(data);
13
- for (var i = len - 1; i > 0; i--) {
14
- var j = Math.floor(Math.random() * (i + 1));
15
- swap(a, i, j);
16
- }
17
- return a;
18
- }
19
- function shuffleArray(data) {
20
- return shuffle(data, data.length, function (t) { return (0, tslib_1.__spreadArray)([], t, true); });
21
- }
22
- describe('qsort-array asc', function () {
23
- var data0 = new Array(50);
24
- for (var i = 0; i < data0.length; i++)
25
- data0[i] = i;
26
- var data1 = [1, 1, 2, 2, 3, 3, 4, 4, 4, 6, 6, 6];
27
- function test(name, data, randomize) {
28
- it(name, function () {
29
- // [ 3, 1, 6, 4, 4, 6, 4, 2, 6, 1, 2, 3 ];
30
- if (randomize) {
31
- for (var i = 0; i < 10; i++) {
32
- expect(Sort.sortArray(shuffleArray(data))).toEqual(data);
33
- }
34
- }
35
- else {
36
- expect(Sort.sortArray((0, tslib_1.__spreadArray)([], data, true))).toEqual(data);
37
- }
38
- });
39
- }
40
- test('uniq', data0, false);
41
- test('uniq shuffle', data0, true);
42
- test('rep', data1, false);
43
- test('rep shuffle', data1, true);
44
- });
45
- describe('qsort-array generic', function () {
46
- var data0 = new Array(50);
47
- for (var i = 0; i < data0.length; i++)
48
- data0[i] = i;
49
- var data1 = [1, 1, 2, 2, 3, 3, 4, 4, 4, 6, 6, 6];
50
- function test(name, data, randomize) {
51
- it(name, function () {
52
- // [ 3, 1, 6, 4, 4, 6, 4, 2, 6, 1, 2, 3 ];
53
- if (randomize) {
54
- for (var i = 0; i < 10; i++) {
55
- expect(Sort.sort(shuffleArray(data), 0, data.length, Sort.arrayLess, Sort.arraySwap)).toEqual(data);
56
- }
57
- }
58
- else {
59
- expect(Sort.sort((0, tslib_1.__spreadArray)([], data, true), 0, data.length, Sort.arrayLess, Sort.arraySwap)).toEqual(data);
60
- }
61
- });
62
- }
63
- test('uniq', data0, false);
64
- test('uniq shuffle', data0, true);
65
- test('rep', data1, false);
66
- test('rep shuffle', data1, true);
67
- });
68
- describe('qsort-dual array', function () {
69
- var len = 3;
70
- var data = { xs: [0, 1, 2], ys: ['x', 'y', 'z'] };
71
- var cmp = function (data, i, j) { return data.xs[i] - data.xs[j]; };
72
- var swap = function (data, i, j) { Sort.arraySwap(data.xs, i, j); Sort.arraySwap(data.ys, i, j); };
73
- var clone = function (d) { return ({ xs: (0, tslib_1.__spreadArray)([], d.xs, true), ys: (0, tslib_1.__spreadArray)([], d.ys, true) }); };
74
- function test(name, src, randomize) {
75
- it(name, function () {
76
- // [ 3, 1, 6, 4, 4, 6, 4, 2, 6, 1, 2, 3 ];
77
- if (randomize) {
78
- for (var i = 0; i < 10; i++) {
79
- expect(Sort.sort(shuffle(src, len, clone, swap), 0, len, cmp, swap)).toEqual(data);
80
- }
81
- }
82
- else {
83
- expect(Sort.sort(clone(src), 0, len, cmp, swap)).toEqual(data);
84
- }
85
- });
86
- }
87
- test('sorted', data, false);
88
- test('shuffled', data, true);
89
- });
90
- //# sourceMappingURL=sort.spec.js.map
package/lib/commonjs/mol-data/_spec/sort.spec.js.map DELETED
@@ -1 +0,0 @@
1
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package/lib/commonjs/mol-data/db/_spec/table.spec.d.ts DELETED
@@ -1,7 +0,0 @@
1
- /**
2
- * Copyright (c) 2017-2018 mol* contributors, licensed under MIT, See LICENSE file for more info.
3
- *
4
- * @author David Sehnal <david.sehnal@gmail.com>
5
- * @author Alexander Rose <alexander.rose@weirdbyte.de>
6
- */
7
- export {};