npm - molstar - Versions diffs - 2.3.9 → 3.0.0-dev.10 - Mend

molstar 2.3.9 → 3.0.0-dev.10

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (3701) hide show

package/lib/mol-util/_spec/reference-cache.spec.js DELETED Viewed

@@ -1,29 +0,0 @@
-/**
- * Copyright (c) 2018 mol* contributors, licensed under MIT, See LICENSE file for more info.
- *
- * @author Alexander Rose <alexander.rose@weirdbyte.de>
- */
-import { createReferenceCache } from '../reference-cache';
-describe('reference-cache', function () {
-    it('basic', function () {
-        var refCache = createReferenceCache(function (x) { return x.toString(); }, function (x) { return x; }, function () { });
-        expect(refCache.count).toBe(0);
-        var ref2a = refCache.get(2);
-        expect(refCache.count).toBe(1);
-        var ref2b = refCache.get(2);
-        expect(refCache.count).toBe(1);
-        expect(ref2b.value).toBe(2);
-        var ref3 = refCache.get(3);
-        expect(refCache.count).toBe(2);
-        expect(ref3.value).toBe(3);
-        ref2a.free();
-        refCache.clear();
-        expect(refCache.count).toBe(2);
-        ref2b.free();
-        refCache.clear();
-        expect(refCache.count).toBe(1);
-        refCache.dispose();
-        expect(refCache.count).toBe(0);
-    });
-});
-//# sourceMappingURL=reference-cache.spec.js.map

package/lib/mol-util/_spec/reference-cache.spec.js.map DELETED Viewed

@@ -1 +0,0 @@

- {"version":3,"file":"reference-cache.spec.js","sourceRoot":"","sources":["../../../src/mol-util/_spec/reference-cache.spec.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAEH,OAAO,EAAE,oBAAoB,EAAE,MAAM,oBAAoB,CAAC;AAE1D,QAAQ,CAAC,iBAAiB,EAAE;IACxB,EAAE,CAAC,OAAO,EAAE;QACR,IAAM,QAAQ,GAAG,oBAAoB,CACjC,UAAC,CAAS,IAAK,OAAA,CAAC,CAAC,QAAQ,EAAE,EAAZ,CAAY,EAC3B,UAAC,CAAC,IAAK,OAAA,CAAC,EAAD,CAAC,EACR,cAAO,CAAC,CACX,CAAC;QACF,MAAM,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;QAE/B,IAAM,KAAK,GAAG,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC;QAC9B,MAAM,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;QAE/B,IAAM,KAAK,GAAG,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC;QAC9B,MAAM,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;QAC/B,MAAM,CAAC,KAAK,CAAC,KAAK,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;QAE5B,IAAM,IAAI,GAAG,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC;QAC7B,MAAM,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;QAC/B,MAAM,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;QAE3B,KAAK,CAAC,IAAI,EAAE,CAAC;QACb,QAAQ,CAAC,KAAK,EAAE,CAAC;QACjB,MAAM,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;QAC/B,KAAK,CAAC,IAAI,EAAE,CAAC;QACb,QAAQ,CAAC,KAAK,EAAE,CAAC;QACjB,MAAM,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;QAE/B,QAAQ,CAAC,OAAO,EAAE,CAAC;QACnB,MAAM,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IACnC,CAAC,CAAC,CAAC;AACP,CAAC,CAAC,CAAC"}

package/lib/mol-util/_spec/string-builder.spec.d.ts DELETED Viewed

@@ -1,6 +0,0 @@
-/**
- * Copyright (c) 2017 mol* contributors, licensed under MIT, See LICENSE file for more info.
- *
- * @author David Sehnal <david.sehnal@gmail.com>
- */
-export {};

package/lib/mol-util/_spec/string-builder.spec.js DELETED Viewed

@@ -1,31 +0,0 @@
-/**
- * Copyright (c) 2017 mol* contributors, licensed under MIT, See LICENSE file for more info.
- *
- * @author David Sehnal <david.sehnal@gmail.com>
- */
-import { StringBuilder as SB } from '../string-builder';
-describe('string-builder', function () {
-    function check(name, bb, expected) {
-        var sb = SB.create();
-        bb(sb);
-        it(name, function () { return expect(SB.getString(sb)).toEqual(expected); });
-    }
-    check('write', function (sb) { return SB.write(sb, '123'); }, '123');
-    check('whitespace', function (sb) { return SB.whitespace(sb, 3); }, '   ');
-    check('writePadLeft', function (sb) { return SB.writePadLeft(sb, '1', 3); }, '  1');
-    check('writePadRight', function (sb) { return SB.writePadRight(sb, '1', 3); }, '1  ');
-    check('writeIntegerPadLeft', function (sb) { return SB.writeIntegerPadLeft(sb, -125, 5); }, ' -125');
-    check('writeIntegerPadRight', function (sb) { return SB.writeIntegerPadRight(sb, -125, 5); }, '-125 ');
-    check('writeFloat', function (sb) { return SB.writeFloat(sb, 1.123, 100); }, '1.12');
-    check('writeFloatPadLeft', function (sb) { return SB.writeFloatPadLeft(sb, 1.123, 100, 6); }, '  1.12');
-    check('writeFloatPadRight', function (sb) { return SB.writeFloatPadRight(sb, -1.123, 100, 6); }, '-1.12 ');
-    it('chunks', function () {
-        var sb = SB.create(2);
-        SB.write(sb, '1');
-        SB.write(sb, '2');
-        SB.write(sb, '3');
-        expect(SB.getChunks(sb)).toEqual(['12', '3']);
-        expect(SB.getString(sb)).toEqual('123');
-    });
-});
-//# sourceMappingURL=string-builder.spec.js.map

package/lib/mol-util/_spec/string-builder.spec.js.map DELETED Viewed

@@ -1 +0,0 @@

- {"version":3,"file":"string-builder.spec.js","sourceRoot":"","sources":["../../../src/mol-util/_spec/string-builder.spec.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAEH,OAAO,EAAE,aAAa,IAAI,EAAE,EAAE,MAAM,mBAAmB,CAAC;AAExD,QAAQ,CAAC,gBAAgB,EAAE;IAEvB,SAAS,KAAK,CAAC,IAAY,EAAE,EAAoB,EAAE,QAAgB;QAC/D,IAAM,EAAE,GAAG,EAAE,CAAC,MAAM,EAAE,CAAC;QACvB,EAAE,CAAC,EAAE,CAAC,CAAC;QACP,EAAE,CAAC,IAAI,EAAE,cAAM,OAAA,MAAM,CAAC,EAAE,CAAC,SAAS,CAAC,EAAE,CAAC,CAAC,CAAC,OAAO,CAAC,QAAQ,CAAC,EAA1C,CAA0C,CAAC,CAAC;IAC/D,CAAC;IAED,KAAK,CAAC,OAAO,EAAE,UAAA,EAAE,IAAI,OAAA,EAAE,CAAC,KAAK,CAAC,EAAE,EAAE,KAAK,CAAC,EAAnB,CAAmB,EAAE,KAAK,CAAC,CAAC;IACjD,KAAK,CAAC,YAAY,EAAE,UAAA,EAAE,IAAI,OAAA,EAAE,CAAC,UAAU,CAAC,EAAE,EAAE,CAAC,CAAC,EAApB,CAAoB,EAAE,KAAK,CAAC,CAAC;IACvD,KAAK,CAAC,cAAc,EAAE,UAAA,EAAE,IAAI,OAAA,EAAE,CAAC,YAAY,CAAC,EAAE,EAAE,GAAG,EAAE,CAAC,CAAC,EAA3B,CAA2B,EAAE,KAAK,CAAC,CAAC;IAChE,KAAK,CAAC,eAAe,EAAE,UAAA,EAAE,IAAI,OAAA,EAAE,CAAC,aAAa,CAAC,EAAE,EAAE,GAAG,EAAE,CAAC,CAAC,EAA5B,CAA4B,EAAE,KAAK,CAAC,CAAC;IAClE,KAAK,CAAC,qBAAqB,EAAE,UAAA,EAAE,IAAI,OAAA,EAAE,CAAC,mBAAmB,CAAC,EAAE,EAAE,CAAC,GAAG,EAAE,CAAC,CAAC,EAAnC,CAAmC,EAAE,OAAO,CAAC,CAAC;IACjF,KAAK,CAAC,sBAAsB,EAAE,UAAA,EAAE,IAAI,OAAA,EAAE,CAAC,oBAAoB,CAAC,EAAE,EAAE,CAAC,GAAG,EAAE,CAAC,CAAC,EAApC,CAAoC,EAAE,OAAO,CAAC,CAAC;IACnF,KAAK,CAAC,YAAY,EAAE,UAAA,EAAE,IAAI,OAAA,EAAE,CAAC,UAAU,CAAC,EAAE,EAAE,KAAK,EAAE,GAAG,CAAC,EAA7B,CAA6B,EAAE,MAAM,CAAC,CAAC;IACjE,KAAK,CAAC,mBAAmB,EAAE,UAAA,EAAE,IAAI,OAAA,EAAE,CAAC,iBAAiB,CAAC,EAAE,EAAE,KAAK,EAAE,GAAG,EAAE,CAAC,CAAC,EAAvC,CAAuC,EAAE,QAAQ,CAAC,CAAC;IACpF,KAAK,CAAC,oBAAoB,EAAE,UAAA,EAAE,IAAI,OAAA,EAAE,CAAC,kBAAkB,CAAC,EAAE,EAAE,CAAC,KAAK,EAAE,GAAG,EAAE,CAAC,CAAC,EAAzC,CAAyC,EAAE,QAAQ,CAAC,CAAC;IAEvF,EAAE,CAAC,QAAQ,EAAE;QACT,IAAM,EAAE,GAAG,EAAE,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC;QACxB,EAAE,CAAC,KAAK,CAAC,EAAE,EAAE,GAAG,CAAC,CAAC;QAClB,EAAE,CAAC,KAAK,CAAC,EAAE,EAAE,GAAG,CAAC,CAAC;QAClB,EAAE,CAAC,KAAK,CAAC,EAAE,EAAE,GAAG,CAAC,CAAC;QAElB,MAAM,CAAC,EAAE,CAAC,SAAS,CAAC,EAAE,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC,IAAI,EAAE,GAAG,CAAC,CAAC,CAAC;QAC9C,MAAM,CAAC,EAAE,CAAC,SAAS,CAAC,EAAE,CAAC,CAAC,CAAC,OAAO,CAAC,KAAK,CAAC,CAAC;IAC5C,CAAC,CAAC,CAAC;AACP,CAAC,CAAC,CAAC"}

package/lib/mol-util/_spec/zip.spec.d.ts DELETED Viewed

@@ -1,6 +0,0 @@
-/**
- * Copyright (c) 2020-2021 mol* contributors, licensed under MIT, See LICENSE file for more info.
- *
- * @author Alexander Rose <alexander.rose@weirdbyte.de>
- */
-export {};

package/lib/mol-util/_spec/zip.spec.js DELETED Viewed

@@ -1,47 +0,0 @@
-/**
- * Copyright (c) 2020-2021 mol* contributors, licensed under MIT, See LICENSE file for more info.
- *
- * @author Alexander Rose <alexander.rose@weirdbyte.de>
- */
-import { __awaiter, __generator } from "tslib";
-import { deflate, inflate, unzip, zip } from '../zip/zip';
-import { SyncRuntimeContext } from '../../mol-task/execution/synchronous';
-describe('zip', function () {
-    it('roundtrip deflate/inflate', function () { return __awaiter(void 0, void 0, void 0, function () {
-        var data, deflated, inflated;
-        return __generator(this, function (_a) {
-            switch (_a.label) {
-                case 0:
-                    data = new Uint8Array([1, 2, 3, 4, 5, 6, 7]);
-                    return [4 /*yield*/, deflate(SyncRuntimeContext, data)];
-                case 1:
-                    deflated = _a.sent();
-                    return [4 /*yield*/, inflate(SyncRuntimeContext, deflated)];
-                case 2:
-                    inflated = _a.sent();
-                    expect(inflated).toEqual(data);
-                    return [2 /*return*/];
-            }
-        });
-    }); });
-    it('roundtrip zip/unzip', function () { return __awaiter(void 0, void 0, void 0, function () {
-        var data, zipped, unzipped;
-        return __generator(this, function (_a) {
-            switch (_a.label) {
-                case 0:
-                    data = {
-                        'test.foo': new Uint8Array([1, 2, 3, 4, 5, 6, 7])
-                    };
-                    return [4 /*yield*/, zip(SyncRuntimeContext, data)];
-                case 1:
-                    zipped = _a.sent();
-                    return [4 /*yield*/, unzip(SyncRuntimeContext, zipped)];
-                case 2:
-                    unzipped = _a.sent();
-                    expect(unzipped).toEqual(data);
-                    return [2 /*return*/];
-            }
-        });
-    }); });
-});
-//# sourceMappingURL=zip.spec.js.map

package/lib/mol-util/_spec/zip.spec.js.map DELETED Viewed

@@ -1 +0,0 @@

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package/lib/mol-util/array.js.map DELETED Viewed

@@ -1 +0,0 @@

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package/lib/mol-util/assets.js.map DELETED Viewed

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package/lib/mol-util/color/names.js.map DELETED Viewed

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package/lib/mol-util/color/palette.js.map DELETED Viewed

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package/lib/mol-util/color/spaces/lab.js.map DELETED Viewed

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-/**
- * Copyright (c) 2019-2020 mol* contributors, licensed under MIT, See LICENSE file for more info.
- *
- * @author Alexander Rose <alexander.rose@weirdbyte.de>
- */
-import { NumberArray } from './type-helpers';
-/** encode float logarithmically */
-export declare function encodeFloatLog(value: number): number;
-/** decode logarithmically encoded float */
-export declare function decodeFloatLog(value: number): number;
-/** encode float as rgb triplet into array at offset */
-export declare function encodeFloatRGBtoArray(value: number, array: NumberArray, offset: number): NumberArray;
-/** decode float encoded as rgb triplet */
-export declare function decodeFloatRGB(r: number, g: number, b: number): number;
-export declare function unpackRGBAToDepth(r: number, g: number, b: number, a: number): number;

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-/**
- * Copyright (c) 2019-2020 mol* contributors, licensed under MIT, See LICENSE file for more info.
- *
- * @author Alexander Rose <alexander.rose@weirdbyte.de>
- */
-import { clamp } from '../mol-math/interpolate';
-import { fasterExp, fasterLog } from '../mol-math/approx';
-import { Vec3, Vec4 } from '../mol-math/linear-algebra';
-var maxFloat = 10000.0; // NOTE same constant is set in shaders
-var floatLogFactor = fasterLog(maxFloat + 1);
-/** encode float logarithmically */
-export function encodeFloatLog(value) { return fasterLog(value + 1) / floatLogFactor; }
-/** decode logarithmically encoded float */
-export function decodeFloatLog(value) { return fasterExp(value * floatLogFactor) - 1; }
-/** encode float as rgb triplet into array at offset */
-export function encodeFloatRGBtoArray(value, array, offset) {
-    value = clamp(value, 0, 16777216 - 1) + 1;
-    array[offset + 2] = value % 256;
-    value = Math.floor(value / 256);
-    array[offset + 1] = value % 256;
-    value = Math.floor(value / 256);
-    array[offset] = value % 256;
-    return array;
-}
-/** decode float encoded as rgb triplet */
-export function decodeFloatRGB(r, g, b) {
-    return (Math.floor(r) * 256 * 256 + Math.floor(g) * 256 + Math.floor(b)) - 1;
-}
-var UnpackDownscale = 255 / 256; // 0..1 -> fraction (excluding 1)
-var PackFactors = Vec3.create(256 * 256 * 256, 256 * 256, 256);
-var UnpackFactors = Vec4.create(UnpackDownscale / PackFactors[0], UnpackDownscale / PackFactors[1], UnpackDownscale / PackFactors[2], UnpackDownscale / 1);
-var tmpDepthRGBA = Vec4();
-export function unpackRGBAToDepth(r, g, b, a) {
-    Vec4.set(tmpDepthRGBA, r / 255, g / 255, b / 255, a / 255);
-    return Vec4.dot(tmpDepthRGBA, UnpackFactors);
-}
-//# sourceMappingURL=float-packing.js.map

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package/lib/mol-util/legend.js.map DELETED Viewed

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