larvitar 1.5.14 → 2.0.2

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (107) hide show
  1. package/.vscode/settings.json +4 -0
  2. package/README.md +78 -48
  3. package/bundler/webpack.common.js +27 -0
  4. package/bundler/webpack.dev.js +23 -0
  5. package/bundler/webpack.prod.js +19 -0
  6. package/decs.d.ts +12 -0
  7. package/dist/imaging/MetaDataReadable.d.ts +40 -0
  8. package/dist/imaging/MetaDataTypes.d.ts +3489 -0
  9. package/dist/imaging/imageAnonymization.d.ts +12 -0
  10. package/dist/imaging/imageColormaps.d.ts +47 -0
  11. package/dist/imaging/imageContours.d.ts +18 -0
  12. package/dist/imaging/imageIo.d.ts +42 -0
  13. package/dist/imaging/imageLayers.d.ts +56 -0
  14. package/dist/imaging/imageLoading.d.ts +65 -0
  15. package/dist/imaging/imageParsing.d.ts +46 -0
  16. package/dist/imaging/imagePresets.d.ts +43 -0
  17. package/dist/imaging/imageRendering.d.ts +238 -0
  18. package/dist/imaging/imageReslice.d.ts +14 -0
  19. package/dist/imaging/imageStore.d.ts +121 -0
  20. package/dist/imaging/imageTags.d.ts +22 -0
  21. package/dist/imaging/imageTools.d.ts +20 -0
  22. package/dist/imaging/imageUtils.d.ts +165 -0
  23. package/dist/imaging/loaders/commonLoader.d.ts +103 -0
  24. package/dist/imaging/loaders/dicomLoader.d.ts +29 -0
  25. package/dist/imaging/loaders/fileLoader.d.ts +33 -0
  26. package/dist/imaging/loaders/multiframeLoader.d.ts +37 -0
  27. package/dist/imaging/loaders/nrrdLoader.d.ts +113 -0
  28. package/dist/imaging/loaders/resliceLoader.d.ts +15 -0
  29. package/dist/imaging/monitors/memory.d.ts +41 -0
  30. package/dist/imaging/monitors/performance.d.ts +23 -0
  31. package/dist/imaging/parsers/ecg.d.ts +15 -0
  32. package/dist/imaging/parsers/nrrd.d.ts +3 -0
  33. package/dist/imaging/tools/custom/4dSliceScrollTool.d.ts +12 -0
  34. package/dist/imaging/tools/custom/BorderMagnifyTool.d.ts +18 -0
  35. package/dist/imaging/tools/custom/contourTool.d.ts +409 -0
  36. package/dist/imaging/tools/custom/diameterTool.d.ts +18 -0
  37. package/dist/imaging/tools/custom/editMaskTool.d.ts +22 -0
  38. package/dist/imaging/tools/custom/ellipticalRoiOverlayTool.d.ts +45 -0
  39. package/dist/imaging/tools/custom/polygonSegmentationMixin.d.ts +54 -0
  40. package/dist/imaging/tools/custom/polylineScissorsTool.d.ts +11 -0
  41. package/dist/imaging/tools/custom/rectangleRoiOverlayTool.d.ts +45 -0
  42. package/dist/imaging/tools/custom/seedTool.d.ts +0 -0
  43. package/dist/imaging/tools/custom/setLabelMap3D.d.ts +39 -0
  44. package/dist/imaging/tools/custom/thresholdsBrushTool.d.ts +19 -0
  45. package/dist/imaging/tools/default.d.ts +53 -0
  46. package/dist/imaging/tools/interaction.d.ts +30 -0
  47. package/dist/imaging/tools/io.d.ts +38 -0
  48. package/dist/imaging/tools/main.d.ts +81 -0
  49. package/dist/imaging/tools/segmentation.d.ts +125 -0
  50. package/dist/imaging/tools/state.d.ts +17 -0
  51. package/dist/imaging/tools/strategies/eraseFreehand.d.ts +16 -0
  52. package/dist/imaging/tools/strategies/fillFreehand.d.ts +16 -0
  53. package/dist/imaging/tools/strategies/index.d.ts +2 -0
  54. package/dist/imaging/waveforms/ecg.d.ts +39 -0
  55. package/dist/index.d.ts +35 -0
  56. package/dist/larvitar.js +90104 -0
  57. package/dist/larvitar.js.map +1 -0
  58. package/imaging/MetaDataReadable.ts +41 -0
  59. package/imaging/MetaDataTypes.ts +3491 -0
  60. package/imaging/dataDictionary.json +5328 -5328
  61. package/imaging/{imageAnonymization.js → imageAnonymization.ts} +41 -13
  62. package/imaging/{imageColormaps.js → imageColormaps.ts} +48 -30
  63. package/imaging/{imageContours.js → imageContours.ts} +24 -22
  64. package/imaging/{imageIo.js → imageIo.ts} +89 -52
  65. package/imaging/{imageLayers.js → imageLayers.ts} +31 -14
  66. package/imaging/{imageLoading.js → imageLoading.ts} +107 -43
  67. package/imaging/{imageParsing.js → imageParsing.ts} +160 -80
  68. package/imaging/{imagePresets.js → imagePresets.ts} +44 -11
  69. package/imaging/imageRendering.ts +1091 -0
  70. package/imaging/{imageReslice.js → imageReslice.ts} +18 -9
  71. package/imaging/imageStore.ts +487 -0
  72. package/imaging/imageTags.ts +609 -0
  73. package/imaging/imageTools.js +2 -1
  74. package/imaging/{imageUtils.js → imageUtils.ts} +211 -701
  75. package/imaging/loaders/{commonLoader.js → commonLoader.ts} +73 -24
  76. package/imaging/loaders/{dicomLoader.js → dicomLoader.ts} +25 -5
  77. package/imaging/loaders/{fileLoader.js → fileLoader.ts} +5 -5
  78. package/imaging/loaders/{multiframeLoader.js → multiframeLoader.ts} +145 -90
  79. package/imaging/loaders/{nrrdLoader.js → nrrdLoader.ts} +231 -64
  80. package/imaging/loaders/{resliceLoader.js → resliceLoader.ts} +51 -20
  81. package/imaging/monitors/{memory.js → memory.ts} +54 -8
  82. package/imaging/monitors/performance.ts +34 -0
  83. package/imaging/parsers/ecg.ts +54 -0
  84. package/imaging/tools/README.md +27 -0
  85. package/imaging/tools/custom/4dSliceScrollTool.js +47 -46
  86. package/imaging/tools/custom/BorderMagnifyTool.js +99 -0
  87. package/imaging/tools/custom/ellipticalRoiOverlayTool.js +534 -0
  88. package/imaging/tools/custom/polylineScissorsTool.js +1 -1
  89. package/imaging/tools/custom/rectangleRoiOverlayTool.js +564 -0
  90. package/imaging/tools/{setLabelMap3D.js → custom/setLabelMap3D.ts} +19 -25
  91. package/imaging/tools/{default.js → default.ts} +119 -33
  92. package/imaging/tools/{interaction.js → interaction.ts} +42 -23
  93. package/imaging/tools/{io.js → io.ts} +47 -31
  94. package/imaging/tools/{main.js → main.ts} +105 -40
  95. package/imaging/tools/{segmentation.js → segmentation.ts} +95 -68
  96. package/imaging/tools/{state.js → state.ts} +7 -12
  97. package/imaging/tools/types.d.ts +243 -0
  98. package/imaging/types.d.ts +200 -0
  99. package/imaging/waveforms/ecg.ts +191 -0
  100. package/{index.js → index.ts} +53 -14
  101. package/jsdoc.json +1 -1
  102. package/package.json +35 -14
  103. package/tsconfig.json +102 -0
  104. package/imaging/imageRendering.js +0 -860
  105. package/imaging/imageStore.js +0 -322
  106. package/modules/vuex/larvitar.js +0 -187
  107. /package/imaging/tools/{polygonSegmentationMixin.js → custom/polygonSegmentationMixin.js} +0 -0
package/imaging/MetaDataReadable.ts ADDED
@@ -0,0 +1,41 @@
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+ //human readable dictionary
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+ export type MetaDataReadable = {
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+ anonymized?: boolean;
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+ larvitarSeriesInstanceUID?: string;
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+ seriesUID?: string;
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+ instanceUID?: string;
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+ studyUID?: string;
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+ accessionNumber?: string;
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+ studyDescription?: string;
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+ patientName?: string;
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+ patientBirthdate?: string;
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+ seriesDescription?: string;
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+ seriesDate?: string;
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+ seriesModality?: string;
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+ intercept?: number | number[];
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+ slope?: number | number[];
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+ pixelSpacing?: [number, number];
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+ sliceThickness?: number | number[];
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+ imageOrientation?: [number, number, number, number, number, number];
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+ imagePosition?: [number, number] | [number, number, number] | number[];
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+ rows?: number;
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+ cols?: number;
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+ numberOfSlices?: number;
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+ numberOfFrames?: number;
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+ frameTime?: number;
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+ frameDelay?: number;
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+ rWaveTimeVector?: number[];
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+ isMultiframe?: boolean;
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+ waveform?: boolean;
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+ temporalPositionIdentifier?: number;
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+ numberOfTemporalPositions?: number;
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+ contentTime?: number;
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+ is4D?: boolean;
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+ windowCenter?: number | number[];
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+ windowWidth?: number | number[];
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+ minPixelValue?: number;
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+ maxPixelValue?: number;
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+ length?: number;
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+ repr?: string | null;
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+ mimeType?: string;
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+ };