larvitar 1.5.14 → 2.0.2

package/dist/imaging/tools/custom/rectangleRoiOverlayTool.d.ts

@@ -0,0 +1,45 @@
+/**
+ * @public
+ * @class RectangleRoiTool
+ * @memberof Tools.Annotation
+ * @classdesc Tool for drawing rectangular regions of interest, and measuring
+ * the statistics of the enclosed pixels.
+ * @extends Tools.Base.BaseAnnotationTool
+ */
+export default class RectangleRoiOverlayTool {
+    constructor(props?: {});
+    throttledUpdateCachedStats: any;
+    createNewMeasurement(eventData: any): {
+        computeMeasurements: any;
+        visible: boolean;
+        active: boolean;
+        color: undefined;
+        invalidated: boolean;
+        handles: {
+            start: {
+                x: any;
+                y: any;
+                highlight: boolean;
+                active: boolean;
+            };
+            end: {
+                x: any;
+                y: any;
+                highlight: boolean;
+                active: boolean;
+            };
+            initialRotation: any;
+            textBox: {
+                active: boolean;
+                hasMoved: boolean;
+                movesIndependently: boolean;
+                drawnIndependently: boolean;
+                allowedOutsideImage: boolean;
+                hasBoundingBox: boolean;
+            };
+        };
+    } | undefined;
+    pointNearTool(element: any, data: any, coords: any, interactionType: any): boolean;
+    updateCachedStats(image: any, element: any, data: any): void;
+    renderToolData(evt: any): void;
+}

package/dist/imaging/tools/custom/setLabelMap3D.d.ts

@@ -0,0 +1,39 @@
+/**
+ * This is a custom version of setLabelMap3D from cs tools source code
+ * This let us implement a non-blocking version of the for loop that loads 3d labelmaps on a volume
+ * @ronzim
+ */
+import { EnabledElement } from "cornerstone-core";
+/**
+ * Takes a 16-bit encoded `ArrayBuffer` and stores it as a `Labelmap3D` for the
+ * `BrushStackState` associated with the element.
+ *
+ * @param  {HTMLElement|string} elementOrEnabledElementUID The cornerstone
+ *                                                  enabled element or its UUID.
+ * @param  {ArrayBuffer} buffer
+ * @param  {number} labelmapIndex The index to store the labelmap under.
+ * @param  {Object[]} metadata = [] Any metadata about the segments.
+ * @param  {number[][]} [segmentsOnLabelmapArray] An array of array of segments on each imageIdIndex.
+ *                       If not present, is calculated.
+ * @param  {colorLUTIndex} [colorLUTIndex = 0] The index of the colorLUT to use to render the segmentation.
+ * @returns {null}
+ */
+declare function setLabelmap3DForElement(elementOrEnabledElementUID: EnabledElement | string, buffer: ArrayBuffer, labelmapIndex: number, metadata: Object[] | undefined, segmentsOnLabelmapArray: number[][], colorLUTIndex?: number): Promise<unknown>;
+/**
+ * Takes an 16-bit encoded `ArrayBuffer` and stores it as a `Labelmap3D` for
+ * the `BrushStackState` associated with the firstImageId.
+ *
+ * @param  {HTMLElement|string} firstImageId  The firstImageId of the series to
+ *                                            store the segmentation on.
+ * @param  {ArrayBuffer} buffer
+ * @param  {number} labelmapIndex The index to store the labelmap under.
+ * @param  {Object[]} metadata = [] Any metadata about the segments.
+ * @param  {number} numberOfFrames The number of frames, required to set up the
+ *                                 relevant labelmap2D views.
+ * @param  {number[][]} [segmentsOnLabelmapArray] An array of array of segments on each imageIdIndex.
+ *                       If not present, is calculated.
+ * @param  {colorLUTIndex} [colorLUTIndex = 0] The index of the colorLUT to use to render the segmentation.
+ * @returns {null}
+ */
+declare function setLabelmap3DByFirstImageId(firstImageId: string, buffer: ArrayBuffer, labelmapIndex: number, metadata: Object[] | undefined, numberOfFrames: number, segmentsOnLabelmapArray: number[][], colorLUTIndex?: number): Promise<unknown>;
+export { setLabelmap3DByFirstImageId, setLabelmap3DForElement };

package/dist/imaging/tools/custom/thresholdsBrushTool.d.ts

@@ -0,0 +1,19 @@
+/**
+ * @public
+ * @class ThresholdsBrushTool
+ * @memberof Tools.Brush
+ * @classdesc Tool for drawing segmentations on an image (only pixels inside thresholds)
+ * @extends Tools.Base.BaseBrushTool
+ */
+export default class ThresholdsBrushTool {
+    constructor(props?: {});
+    touchDragCallback: (evt: Object) => void;
+    /**
+     * Paints the data to the labelmap.
+     *
+     * @protected
+     * @param  {Object} evt The data object associated with the event.
+     * @returns {void}
+     */
+    protected _paint(evt: Object): void;
+}

package/dist/imaging/tools/default.d.ts

@@ -0,0 +1,53 @@
+/** @module imaging/tools/default
+ *  @desc  This file provides definitions
+ *         for default tools
+ */
+import type { ToolConfig, ToolMouseKeys, ToolSettings, ToolStyle } from "./types";
+/**
+ * These tools are added with `addDefaultTools()`
+ */
+declare const DEFAULT_TOOLS: {
+    [key: string]: ToolConfig;
+};
+/**
+ * D/Vision Lab custom tools
+ */
+declare const dvTools: {
+    [key: string]: any;
+};
+/**
+ * Tools default style
+ * Available font families :
+ * Work Sans, Roboto, OpenSans, HelveticaNeue-Light,
+ * Helvetica Neue Light, Helvetica Neue, Helvetica,
+ * Arial, Lucida Grande, sans-serif;
+ */
+declare const DEFAULT_STYLE: ToolStyle;
+/**
+ * Tools default settings
+ */
+declare const DEFAULT_SETTINGS: ToolSettings;
+/**
+ * Shortcut and mouse bindings defaults
+ */
+declare const DEFAULT_MOUSE_KEYS: ToolMouseKeys;
+/**
+ * Get available tools by type (useful to populate menus)
+ * @param {String} type
+ */
+declare const getDefaultToolsByType: (type: NonNullable<ToolConfig["type"]>) => ToolConfig[];
+/**
+ * Override default tools props
+ * @param {Array} newProps - An array of objects as in the DEFAULT_TOOLS list, but with a subset of props
+ * NOTE: prop "name" is mandatory
+ */
+declare const setDefaultToolsProps: (newProps: Partial<ToolConfig>[]) => void;
+/**
+ * Register a custom tool
+ * @param {String} toolName - The name of the tool
+ * @param {Object} toolClass - The tool class
+ * NOTE: toolName must be unique
+ * NOTE: toolClass must be a valid cornerstone tool
+ */
+declare const registerExternalTool: (toolName: string, toolClass: any) => void;
+export { DEFAULT_TOOLS, DEFAULT_STYLE, DEFAULT_SETTINGS, DEFAULT_MOUSE_KEYS, dvTools, getDefaultToolsByType, setDefaultToolsProps, registerExternalTool };

package/dist/imaging/tools/interaction.d.ts

@@ -0,0 +1,30 @@
+/** @module imaging/tools/interaction
+ *  @desc  This file provides functionalities for
+ *         tools interactions
+ */
+import type { ToolMouseKeys } from "./types";
+/**
+ * Setup mouse handler modifiers and keyboard shortcuts:
+ * register a tool on right button and another one
+ * when pressing a modifier (ctrl/shift/alt) + right button
+ * The activation take place on all active viewports (we added a check to activate only on viewports
+ * in which the tool has been added previously)
+ * Improvements could be:
+ * - "restore previous active tool" instead of passed "default" tool
+ * - manage left button (an idea could be to cycle over object keys for both buttons)
+ * - possibility to change modifier keys
+ * @param {Object} config - see tools/default
+ */
+export declare function addMouseKeyHandlers(config: ToolMouseKeys): void;
+/**
+ *
+ */
+export declare function removeMouseKeyHandlers(): void;
+/**
+ * Add event handlers to mouse move
+ * @instance
+ * @function toggleMouseHandlers
+ * @param {String | HTMLElement} elementId - The html div id used for rendering or its DOM HTMLElement
+ * @param {Boolean} disable - If true disable handlers, default is false
+ */
+export declare const toggleMouseToolsListeners: (elementId: string | HTMLElement, disable: boolean) => void;

package/dist/imaging/tools/io.d.ts

@@ -0,0 +1,38 @@
+/** @module imaging/tools/io
+ *  @desc  This file provides functionalities for
+ *         tools input/output
+ */
+import type { ToolState } from "./types";
+import { fileManager } from "../loaders/fileLoader";
+declare global {
+    interface Document {
+        documentMode?: any;
+    }
+    interface Navigator {
+        msSaveBlob?: (blob: any, defaultName?: string) => boolean;
+    }
+}
+/**
+ * Load annotation from json object
+ * @param {Object} jsonData - The previously saved tools state
+ */
+export declare const loadAnnotations: (jsonData: ToolState) => void;
+/**
+ * Save annotations from current stack, download as json file if requested
+ * @param {bool} download - True to download json
+ * @param {string} filename - The json file name, @default state.json
+ */
+export declare const saveAnnotations: (download: boolean, filename?: string) => any;
+/**
+ * Save annotation from current stack, download as csv file
+ * containing only useful informations for user
+ */
+export declare const exportAnnotations: (manager: typeof fileManager, filename?: string) => void;
+/**
+ *
+ * @param {*} allToolState
+ */
+export declare function generateCSV(manager: typeof fileManager, allToolState: ToolState): {
+    fieldsArr: string[];
+    data: Object[];
+};

package/dist/imaging/tools/main.d.ts

@@ -0,0 +1,81 @@
+/** @module imaging/tools/main
+ *  @desc  This file provides functionalities
+ *         for initializing tools and stacks
+ */
+import { saveAnnotations, loadAnnotations, exportAnnotations } from "./io";
+import type { ToolConfig, ToolSettings, ToolStyle } from "./types";
+/**
+ * Initialize cornerstone tools with default configuration (extended with custom configuration)
+ * @function initializeCSTools
+ * @param {Object} settings - the settings object (see tools/default.js)
+ * @param {Object} settings - the style object (see tools/default.js)
+ * @example larvitar.initializeCSTools({showSVGCursors:false}, {color: "0000FF"});
+ */
+declare const initializeCSTools: (settings?: ToolSettings, style?: ToolStyle) => void;
+/**
+ * Create stack object to sync stack tools
+ * @function csToolsCreateStack
+ * @param {HTMLElement} element - The target hmtl element.
+ * @param {Array?} imageIds - Stack image ids.
+ * @param {String} currentImageId - The current image id.
+ */
+declare const csToolsCreateStack: (element: HTMLElement, imageIds?: string[], currentImageIndex?: number) => void;
+export declare function csToolsUpdateImageIds(elementId: string, imageIds: string[], imageIdIndex: number): void;
+/**
+ * Update currentImageIdIndex in cs tools stack
+ * @param {String} elementId - The target html element id
+ * @param {String} imageId - The imageId in the form xxxxxx//:imageIndex
+ */
+export declare function csToolsUpdateImageIndex(elementId: string, imageId: string): void;
+/**
+ * Add a cornerstone tool (grab it from original library or dvision custom tools)
+ * @param {*} toolName
+ * @param {*} targetElementId
+ * @example larvitar.addTool("ScaleOverlay", {configuration:{minorTickLength: 10, majorTickLength: 25}}, "viewer")
+ */
+declare const addTool: (toolName: string, customConfig: Partial<ToolConfig>, targetElementId?: string) => void;
+/**
+ * Add all default tools, as listed in tools/default.js
+ * @function addDefaultTools
+ */
+export declare const addDefaultTools: (elementId: string) => void;
+/**
+ * Set Tool "active" on all elements (ie, rendered and manipulable) & refresh cornerstone elements
+ * @function setToolActive
+ * @param {String} toolName - The tool name.
+ * @param {Object} options - The custom options. @default from tools/default.js
+ * @param {Array} viewports - The hmtl element id to be used for tool initialization.
+ * @param {Boolean} doNotSetInStore - Flag to avoid setting in store (useful on tools initialization eg in addDefaultTools). NOTE: This is just a hack, we must rework tools/ui sync.
+ */
+declare const setToolActive: (toolName: string, options?: Partial<ToolConfig["options"]>, viewports?: string[], doNotSetInStore?: boolean) => void;
+/**
+ * Set Tool "disabled" on all elements (ie, not rendered) & refresh cornerstone elements
+ * @function setToolDisabled
+ * @param {String} toolName - The tool name.
+ * @param {Array} viewports - The hmtl element id to be used for tool initialization.
+ * @param {Boolean} resetCursor - Flag to restore native cursor. @default true
+ */
+declare const setToolDisabled: (toolName: string, viewports?: string[], resetCursor?: boolean) => void;
+/**
+ * Set Tool "enabled" on all elements (ie, rendered but not manipulable) & refresh cornerstone elements
+ * @function setToolEnabled
+ * @param {String} toolName - The tool name.
+ * @param {Array} viewports - The hmtl element id to be used for tool initialization.
+ * @param {Boolean} resetCursor - Flag to restore native cursor. @default true
+ */
+declare const setToolEnabled: (toolName: string, viewports?: string[], resetCursor?: boolean) => void;
+/**
+ * Set Tool "enabled" on all elements (ie, rendered and manipulable passively) & refresh cornerstone elements
+ * @function setToolPassive
+ * @param {String} toolName - The tool name.
+ * @param {Array} viewports - The hmtl element id to be used for tool initialization.
+ */
+declare const setToolPassive: (toolName: string, viewports?: string[]) => void;
+/** @inner Internal module functions */
+/**
+ * Set cornerstone tools custom configuration (extend default configuration)
+ * @function setToolsStyle
+ * @param {Object} style - the style object (see tools/defaults.js)
+ */
+declare const setToolsStyle: (style?: ToolStyle) => void;
+export { initializeCSTools, setToolsStyle, csToolsCreateStack, addTool, setToolActive, setToolEnabled, setToolDisabled, setToolPassive, saveAnnotations, loadAnnotations, exportAnnotations };

package/dist/imaging/tools/segmentation.d.ts

@@ -0,0 +1,125 @@
+/** @module imaging/tools/segmentation
+ *  @desc  This file provides functionalities
+ *         for handling masks and luts
+ */
+import { BrushProperties, MaskProperties, SegmentationConfig } from "./types.d";
+import type { TypedArray } from "../types";
+export declare function rgbToHex(c: number[]): string;
+export declare function hexToRgb(hex: string): number[];
+/**
+ * Force cs tools refresh on all enabled images
+ */
+export declare function forceRender(): void;
+/**
+ * Set color for label
+ * @param {Number} labelId
+ * @param {String} color in hex format
+ */
+export declare function setLabelColor(labelId: string, color: string): void;
+/**
+ * Get color from label
+ * @param {Number} labelId
+ * @returns {String} Color in hex format
+ */
+export declare function getLabelColor(labelId: string): string;
+/**
+ * A function to group all settings to load before masks
+ * @param {Object} customConfig - Object containing override values for segmentation module config
+ */
+export declare function initSegmentationModule(customConfig: SegmentationConfig): void;
+/**
+ * Add segmentation mask to segmentation module
+ * @param {Object} props - The mask properties (labelId, color and opacity)
+ * @param {TypedArray} - The mask data array
+ * @param {String} elementId - The target html element Id or its DOM HTMLElement
+ * @returns {Promise} - Return a promise which will resolve when segmentation mask is added
+ */
+export declare function addSegmentationMask(props: MaskProperties, data: TypedArray, elementId: string | HTMLElement): Promise<void>;
+/**
+ * Set a new mask slice into the labelmap buffer
+ * @param {String} elementId - The target html element Id or its DOM HTMLElement
+ * @param {Number} sliceIndex - the index of the new mask slice
+ * @param {ArrayBuffer} pixelData - the pixelData array
+ */
+export declare function loadMaskSlice(elementId: string | HTMLElement, sliceIndex: number, pixelData: TypedArray): void;
+/**
+ * Activate a specific labelmap through its labelId
+ * @param {Number} labelId - The labelmap id to activate
+ * @param {String} elementId - The target html element Id or its DOM HTMLElement
+ */
+export declare function setActiveLabelmap(labelId: number, elementId: string | HTMLElement): void;
+/**
+ * Get active labelmap for target element
+ * @param {String} elementId - The target html element Id or its DOM HTMLElement
+ * @returns {Object} The active labelmap object that contains the buffer
+ */
+export declare function getActiveLabelmapBuffer(elementId: string | HTMLElement): any;
+/**
+ * Activate a specific segment through its index
+ * @param {Number} segmentIndex - The segment index to activate
+ * @param {String} elementId - The target html element Id or its DOM HTMLElement
+ */
+export declare function setActiveSegment(segmentIndex: number, elementId: string | HTMLElement): void;
+/**
+ * Change opacity for active label
+ * @param {Number} opacity - The desired opacity value
+ */
+export declare function setActiveLabelOpacity(opacity: number): void;
+/**
+ * Change opacity for inactive labels
+ * @param {Number} opacity - The desired opacity value
+ */
+export declare function setInactiveLabelOpacity(opacity: number): void;
+/**
+ * Toggle mask visibility
+ * @param {String} elementId - The target html element Id or its DOM HTMLElement
+ * @param {Number} labelId - The id of the mask label
+ */
+export declare function toggleVisibility(elementId: string | HTMLElement, labelId: number): void;
+/**
+ * Toggle between 'contours mode' and 'filled mode'
+ * @param {Bool} toggle - Contour mode enabled if true
+ */
+export declare function toggleContourMode(toggle: boolean): void;
+/**
+ * Set mask appearance props
+ * @param {Object} maskProps - The mask appearance props (labelId, visualization [0=filled, 1=contour, 2=hidden], opacity (if mode=0), between 0 and 1)
+ */
+export declare function setMaskProps(props: MaskProperties): void;
+/**
+ * Clear state for segmentation module
+ */
+export declare function clearSegmentationState(): void;
+/**
+ * Enable brushing
+ * NOTE: if options contains `thresholds`, ThresholdsBrush is activated, otherwise BrushTool is activated.
+ * Anyway, the activated tool name is returned
+ * @param {Object} options - An object containing configuration values (eg radius, thresholds, etc...)
+ */
+export declare function enableBrushTool(viewports: string[], options: BrushProperties): "Brush" | "ThresholdsBrush";
+/**
+ * Disable brushing
+ * This function disables both brush tools, if found active on `viewports`
+ * @param {String} toolToActivate - The name of the tool to activate after removing the brush @optional
+ */
+export declare function disableBrushTool(viewports: string[], toolToActivate?: string): void;
+/**
+ * Change the brush props
+ * @param {Object} props - The new brush props {radius: number[px], thresholds: array[min,max]}
+ */
+export declare function setBrushProps(props: BrushProperties): void;
+/**
+ * Undo last brush operation (stroke)
+ * @param {String} elementId - The target html element Id or its DOM HTMLElement
+ */
+export declare function undoLastStroke(elementId: string | HTMLElement): void;
+/**
+ * Redo last brush operation (stroke)
+ * @param {String} elementId - The target html element Id or its DOM HTMLElement
+ */
+export declare function redoLastStroke(elementId: string | HTMLElement): void;
+/**
+ * Delete mask from state
+ * @param {Number} labelId - The labelmap id to delete
+ */
+export declare function deleteMask(labelId: number): void;

package/dist/imaging/tools/state.d.ts

@@ -0,0 +1,17 @@
+/** @module imaging/tools/state
+ *  @desc  This file provides functionalities
+ *         for handling tools' state
+ */
+import type { ToolState } from "./types";
+/**
+ *
+ * @param {*} elementId
+ */
+declare const saveToolState: (elementId: string) => any;
+/**
+ *
+ * @param {*} elementId
+ * @param {*} allToolState
+ */
+declare const restoreToolState: (elementId: string, allToolState: ToolState) => void;
+export { saveToolState, restoreToolState };

package/dist/imaging/tools/strategies/eraseFreehand.d.ts

@@ -0,0 +1,16 @@
+/**
+ * Erase all pixels inside/outside the region defined by `operationData.points`.
+ * @param  {} evt The Cornerstone event.
+ * @param {}  operationData An object containing the `pixelData` to
+ *                          modify, the `segmentIndex` and the `points` array.
+ * @returns {null}
+ */
+export function eraseInsideFreehand(evt: any, operationData: any): null;
+/**
+ * Erase all pixels outside the region defined by `operationData.points`.
+ * @param  {} evt The Cornerstone event.
+ * @param  {} operationData An object containing the `pixelData` to
+ *                          modify, the `segmentIndex` and the `points` array.
+ * @returns {null}
+ */
+export function eraseOutsideFreehand(evt: any, operationData: any): null;

package/dist/imaging/tools/strategies/fillFreehand.d.ts

@@ -0,0 +1,16 @@
+/**
+ * Fill all pixels inside/outside the region defined by `operationData.points`.
+ * @param  {} evt The Cornerstone event.
+ * @param {}  operationData An object containing the `pixelData` to
+ *                          modify, the `segmentIndex` and the `points` array.
+ * @returns {null}
+ */
+export function fillInsideFreehand(evt: any, operationData: any): null;
+/**
+ * Fill all pixels outside the region defined by `operationData.points`.
+ * @param  {} evt The Cornerstone event.
+ * @param  {} operationData An object containing the `pixelData` to
+ *                          modify, the `segmentIndex` and the `points` array.
+ * @returns {null}
+ */
+export function fillOutsideFreehand(evt: any, operationData: any): null;

package/dist/imaging/tools/strategies/index.d.ts

@@ -0,0 +1,2 @@
+export { eraseInsideFreehand, eraseOutsideFreehand } from "./eraseFreehand";
+export { fillInsideFreehand, fillOutsideFreehand } from "./fillFreehand";

package/dist/imaging/waveforms/ecg.d.ts

@@ -0,0 +1,39 @@
+/** @module waveforms/ecg
+ *  @desc This file provides utility functions for
+ *        rendering ecg waveforms using plotly.js
+ */
+import Plotly from "plotly.js-dist-min";
+/**
+ * Render ECG waveform in a div
+ * @instance
+ * @function renderECG
+ * @param {number[]} data - ECG waveform data
+ * @param {string} divId - DivId to render waveform in
+ * @param {string} colorMarker - Color of the marker
+ * @param {number} numberOfframes - Number of frames in the image
+ * @param {number} frameTime - Time interval of each frame in the image
+ * @param {number} frameId - FrameId of the image to be rendered
+ * @returns {Object} traceData - Plotly trace data
+ */
+export declare const renderECG: (data: number[], divId: string, colorMarker: string, numberOfFrames: number, frameTime: number, frameId?: number) => Partial<Plotly.PlotData>[];
+/**
+ * Sync ECG waveform with rendered image on click
+ * @instance
+ * @function syncECGFrame
+ * @param {Object} traceData - Plotly trace data
+ * @param {string} seriesId - SeriesId of the image
+ * @param {string} canvasId - CanvasId of the image
+ * @param {number} numberOfFrames - Number of frames in the image
+ * @param {string} divId - DivId to render waveform in
+ */
+export declare const syncECGFrame: (traceData: Partial<Plotly.PlotData>[], seriesId: string, canvasId: string, numberOfFrames: number, divId: string) => void;
+/**
+ * Sync ECG waveform with rendered image on click
+ * @instance
+ * @function updateECGFrame
+ * @param {Object} traceData - Plotly trace data
+ * @param {number} frameId - FrameId of the image
+ * @param {number} numberOfFrames - Number of frames in the image
+ * @param {string} divId - DivId to render waveform in
+ */
+export declare const updateECGFrame: (traceData: Partial<Plotly.PlotData>[], frameId: number, numberOfFrames: number, divId: string) => void;

package/dist/index.d.ts

@@ -0,0 +1,35 @@
+declare const VERSION: string;
+import cornerstone from "cornerstone-core";
+import cornerstoneTools from "cornerstone-tools";
+import { parseDicom } from "dicom-parser";
+import { default as cornerstoneDICOMImageLoader } from "cornerstone-wado-image-loader";
+declare const segModule: any;
+import { checkAndClearMemory, checkMemoryAllocation, getUsedMemory, getAvailableMemory } from "./imaging/monitors/memory";
+import { getPerformanceMonitor, activatePerformanceMonitor, deactivatePerformanceMonitor } from "./imaging/monitors/performance";
+import store from "./imaging/imageStore";
+import { parseContours } from "./imaging/imageContours";
+import { parseECG } from "./imaging/parsers/ecg";
+import { renderECG, syncECGFrame, updateECGFrame } from "./imaging/waveforms/ecg";
+import { getImagePresets, setImagePreset, setImageCustomPreset } from "./imaging/imagePresets";
+import { getNormalOrientation, getMinPixelValue, getMaxPixelValue, getPixelRepresentation, getTypedArrayFromDataType, getSortedStack, randomId, getMeanValue, getReslicedMetadata, getReslicedPixeldata, getDistanceBetweenSlices, getImageMetadata } from "./imaging/imageUtils";
+import { buildHeader, getCachedPixelData, buildData, buildDataAsync, importNRRDImage } from "./imaging/imageIo";
+import { anonymize } from "./imaging/imageAnonymization";
+import { buildLayer, updateLayer, getActiveLayer, setActiveLayer } from "./imaging/imageLayers";
+import { initializeImageLoader, initializeWebImageLoader, initializeFileImageLoader, registerNRRDImageLoader, registerResliceLoader, registerMultiFrameImageLoader, updateLoadedStack } from "./imaging/imageLoading";
+import { readFile, readFiles, parseDataSet, clearImageParsing } from "./imaging/imageParsing";
+import { clearImageCache, loadAndCacheImages, renderFileImage, renderDICOMPDF, renderWebImage, disableViewport, unloadViewport, resizeViewport, renderImage, updateImage, resetViewports, updateViewportData, storeViewportData, invertImage, flipImageHorizontal, flipImageVertical, rotateImageLeft, rotateImageRight } from "./imaging/imageRendering";
+import { resliceSeries } from "./imaging/imageReslice";
+import { addDiameterTool, addContoursTool, addMaskEditingTool, getCurrentMaskData, addStackStateToElement, addSeedsTool, clearMeasurements, getToolState, clearToolStateByName, updateDiameterTool, addToolStateSingleSlice, clearCornerstoneElements, syncToolStack, updateStackToolState, setSegmentationConfig } from "./imaging/imageTools";
+import { csToolsCreateStack, csToolsUpdateImageIds, csToolsUpdateImageIndex, initializeCSTools, setToolsStyle, addDefaultTools, addTool, setToolActive, setToolDisabled, setToolEnabled, setToolPassive, exportAnnotations } from "./imaging/tools/main";
+import { DEFAULT_TOOLS, dvTools, getDefaultToolsByType, setDefaultToolsProps, registerExternalTool } from "./imaging/tools/default";
+import { initSegmentationModule, addSegmentationMask, clearSegmentationState, deleteMask, setActiveLabelmap, setActiveSegment, enableBrushTool, disableBrushTool, undoLastStroke, redoLastStroke, setBrushProps, toggleContourMode, toggleVisibility, hexToRgb, rgbToHex, getActiveLabelmapBuffer } from "./imaging/tools/segmentation";
+import { updateLarvitarManager, populateLarvitarManager, getLarvitarManager, getLarvitarImageTracker, resetLarvitarManager, removeSeriesFromLarvitarManager, getSeriesDataFromLarvitarManager, getImageFrame, getSopInstanceUIDFromLarvitarManager } from "./imaging/loaders/commonLoader";
+import { buildNrrdImage, getNrrdImageId, loadNrrdImage, getImageIdFromSlice, getSliceNumberFromImageId, getNrrdSerieDimensions } from "./imaging/loaders/nrrdLoader";
+import { getDicomImageId, cacheImage, cacheImages } from "./imaging/loaders/dicomLoader";
+import { loadReslicedImage } from "./imaging/loaders/resliceLoader";
+import { loadMultiFrameImage, buildMultiFrameImage, getMultiFrameImageId, clearMultiFrameCache } from "./imaging/loaders/multiframeLoader";
+import { fileManager, resetFileLoader, resetFileManager, populateFileManager, getFileImageId } from "./imaging/loaders/fileLoader";
+import { getColormapsList, applyColorMap, addColorMap, fillPixelData, HSVToRGB } from "./imaging/imageColormaps";
+import { saveAnnotations, loadAnnotations } from "./imaging/tools/io";
+import { addMouseKeyHandlers, removeMouseKeyHandlers, toggleMouseToolsListeners } from "./imaging/tools/interaction";
+export { VERSION, cornerstone, cornerstoneTools, parseDicom, segModule, cornerstoneDICOMImageLoader, checkAndClearMemory, checkMemoryAllocation, getUsedMemory, getAvailableMemory, getPerformanceMonitor, activatePerformanceMonitor, deactivatePerformanceMonitor, store, parseECG, syncECGFrame, updateECGFrame, renderECG, getImagePresets, setImagePreset, setImageCustomPreset, getNormalOrientation, getMinPixelValue, getMaxPixelValue, getPixelRepresentation, getTypedArrayFromDataType, getSortedStack, randomId, getMeanValue, getReslicedMetadata, getReslicedPixeldata, getDistanceBetweenSlices, getImageMetadata, buildHeader, getCachedPixelData, buildData, buildDataAsync, importNRRDImage, anonymize, buildLayer, updateLayer, getActiveLayer, setActiveLayer, initializeImageLoader, initializeWebImageLoader, initializeFileImageLoader, registerNRRDImageLoader, registerResliceLoader, registerMultiFrameImageLoader, updateLoadedStack, readFile, readFiles, parseDataSet, clearImageParsing, clearImageCache, loadAndCacheImages, renderFileImage, renderDICOMPDF, renderWebImage, disableViewport, unloadViewport, resizeViewport, renderImage, updateImage, resetViewports, updateViewportData, toggleMouseToolsListeners, storeViewportData, invertImage, flipImageHorizontal, flipImageVertical, rotateImageLeft, rotateImageRight, resliceSeries, getColormapsList, applyColorMap, addColorMap, fillPixelData, HSVToRGB, parseContours, updateLarvitarManager, populateLarvitarManager, getLarvitarManager, getLarvitarImageTracker, resetLarvitarManager, removeSeriesFromLarvitarManager, getSeriesDataFromLarvitarManager, getImageFrame, getSopInstanceUIDFromLarvitarManager, buildNrrdImage, getNrrdImageId, loadNrrdImage, getImageIdFromSlice, getSliceNumberFromImageId, getNrrdSerieDimensions, loadReslicedImage, getDicomImageId, cacheImage, cacheImages, loadMultiFrameImage, buildMultiFrameImage, getMultiFrameImageId, clearMultiFrameCache, fileManager, resetFileLoader, resetFileManager, populateFileManager, getFileImageId, addDiameterTool, addContoursTool, addMaskEditingTool, getCurrentMaskData, addStackStateToElement, addSeedsTool, clearMeasurements, getToolState, clearToolStateByName, updateDiameterTool, addToolStateSingleSlice, clearCornerstoneElements, syncToolStack, updateStackToolState, setSegmentationConfig, csToolsCreateStack, csToolsUpdateImageIds, csToolsUpdateImageIndex, initializeCSTools, setToolsStyle, addDefaultTools, addTool, setToolActive, setToolDisabled, setToolEnabled, setToolPassive, exportAnnotations, DEFAULT_TOOLS, dvTools, getDefaultToolsByType, setDefaultToolsProps, registerExternalTool, saveAnnotations, loadAnnotations, addMouseKeyHandlers, removeMouseKeyHandlers, initSegmentationModule, addSegmentationMask, setActiveLabelmap, setActiveSegment, undoLastStroke, redoLastStroke, setBrushProps, hexToRgb, rgbToHex, clearSegmentationState, deleteMask, enableBrushTool, disableBrushTool, toggleContourMode, toggleVisibility, getActiveLabelmapBuffer };