kirograph 0.28.0 → 0.28.1

package/dist/security/vuln/osv-adapter.d.ts

@@ -1,58 +0,0 @@
-/**
- * OSV API Adapter
- *
- * Queries the OSV (Open Source Vulnerabilities) database for known CVEs
- * affecting project dependencies. Implements the VulnDatabaseAdapter interface.
- */
-import { CVERecord } from '../types';
-import type { VulnDatabaseAdapter, BatchQuery } from './types';
-export type { VulnDatabaseAdapter, BatchQuery };
-export declare class OsvAdapter implements VulnDatabaseAdapter {
-    readonly name = "OSV";
-    private readonly apiUrl;
-    private readonly batchApiUrl;
-    private readonly timeoutMs;
-    constructor(options?: {
-        apiUrl?: string;
-        batchApiUrl?: string;
-        timeoutMs?: number;
-    });
-    /**
-     * Batch query up to OSV_BATCH_MAX_QUERIES packages in a single HTTP request.
-     * Results are returned in the same order as the input queries.
-     * Queries for unsupported ecosystems produce empty results without an HTTP call.
-     */
-    queryBatch(queries: BatchQuery[], signal?: AbortSignal): Promise<Array<CVERecord[]>>;
-    query(ecosystem: string, packageName: string, version: string, signal?: AbortSignal): Promise<CVERecord[]>;
-    /**
-     * Parse the OSV API response into CVERecord objects.
-     */
-    private parseResponse;
-    /**
-     * Extract CVE ID from the vulnerability's aliases or use the OSV ID.
-     * Prefers CVE-* identifiers from the aliases array.
-     */
-    private extractCveId;
-    /**
-     * Extract CVSS v3.1 base score from the severity array.
-     * Returns 0 if no CVSS score is available.
-     */
-    private extractSeverity;
-    /**
-     * Parse a CVSS vector string or numeric score.
-     * CVSS vectors look like: "CVSS:3.1/AV:N/AC:L/PR:N/UI:N/S:U/C:H/I:H/A:H"
-     * The base score is not directly in the vector — we extract it if it's a plain number,
-     * or return null if we can't parse it.
-     */
-    private parseCvssScore;
-    /**
-     * Extract affected version ranges and the first fixed version from the vulnerability.
-     */
-    private extractAffectedRanges;
-    /**
-     * Extract and truncate the summary from the vulnerability.
-     * Prefers the summary field, falls back to details.
-     */
-    private extractSummary;
-}
-//# sourceMappingURL=osv-adapter.d.ts.map

package/dist/security/vuln/osv-adapter.d.ts.map

@@ -1 +0,0 @@
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package/dist/security/vuln/types.d.ts

@@ -1,29 +0,0 @@
-/**
- * Shared types for the vulnerability database subsystem.
- */
-import type { CVERecord } from '../types';
-/** A single entry in a batch vulnerability query. */
-export interface BatchQuery {
-    ecosystem: string;
-    packageName: string;
-    version: string;
-}
-/**
- * Adapter interface for querying a vulnerability database.
- * Each supported database (OSV, NVD, etc.) implements this interface.
- */
-export interface VulnDatabaseAdapter {
-    /** Human-readable name of the database (e.g. "OSV") */
-    name: string;
-    /**
-     * Query for vulnerabilities affecting a specific package version.
-     */
-    query(ecosystem: string, packageName: string, version: string, signal?: AbortSignal): Promise<CVERecord[]>;
-    /**
-     * Batch query — results[i] corresponds to queries[i].
-     * Implementing this is optional but strongly recommended for performance:
-     * a single HTTP request replaces N sequential requests.
-     */
-    queryBatch?(queries: BatchQuery[], signal?: AbortSignal): Promise<Array<CVERecord[]>>;
-}
-//# sourceMappingURL=types.d.ts.map

package/dist/security/vuln/types.d.ts.map

@@ -1 +0,0 @@
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package/dist/sync/index.d.ts

@@ -1,35 +0,0 @@
-/**
- * Sync Module — file discovery and change detection
- *
- * Extracted from KiroGraph class private methods in src/index.ts.
- * Provides scanDirectory, hashContent, shouldIncludeFile, and getChangedFiles.
- */
-import type { KiroGraphConfig } from '../config';
-/**
- * Returns true when relPath passes the include/exclude filter from config.
- * Exclude patterns are checked first; include patterns (if any) are checked second.
- */
-export declare function shouldIncludeFile(relPath: string, config: KiroGraphConfig): boolean;
-/**
- * SHA-256 hex digest of the given content.
- */
-export declare function hashContent(content: Buffer | string): string;
-/**
- * Returns absolute paths of all indexable files under root.
- * Handles monorepos with multiple nested git roots by running git ls-files
- * from each sub-repo root independently, then merging results.
- * Falls back to filesystem walk if no git roots found.
- * Respects AbortSignal.
- */
-export declare function scanDirectory(root: string, config: KiroGraphConfig, signal?: AbortSignal): Promise<string[]>;
-/**
- * Classifies git-changed files into added / modified / removed across all nested git roots.
- * Returns absolute paths. Returns empty arrays if git is unavailable.
- * Excludes paths whose detected language is 'unknown'.
- */
-export declare function getChangedFiles(root: string, config: KiroGraphConfig): Promise<{
-    added: string[];
-    modified: string[];
-    removed: string[];
-}>;
-//# sourceMappingURL=index.d.ts.map

package/dist/sync/index.d.ts.map

@@ -1 +0,0 @@
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package/dist/types.d.ts

@@ -1,137 +0,0 @@
-/**
- * KiroGraph Type Definitions
- */
-export type NodeKind = 'file' | 'module' | 'class' | 'struct' | 'interface' | 'trait' | 'protocol' | 'function' | 'method' | 'property' | 'field' | 'variable' | 'constant' | 'enum' | 'enum_member' | 'type_alias' | 'namespace' | 'parameter' | 'import' | 'export' | 'route' | 'component' | 'dependency' | 'vulnerability';
-export type EdgeKind = 'contains' | 'calls' | 'imports' | 'exports' | 'extends' | 'implements' | 'references' | 'type_of' | 'returns' | 'instantiates' | 'overrides' | 'decorates' | 'has_vulnerability' | 'depends_on' | 'declared_in';
-export type Language = 'typescript' | 'javascript' | 'tsx' | 'jsx' | 'python' | 'go' | 'rust' | 'java' | 'c' | 'cpp' | 'csharp' | 'php' | 'ruby' | 'swift' | 'kotlin' | 'dart' | 'svelte' | 'pascal' | 'liquid' | 'elixir' | 'scala' | 'lua' | 'zig' | 'bash' | 'ocaml' | 'elm' | 'solidity' | 'vue' | 'objc' | 'yaml' | 'hcl' | 'css' | 'scss' | 'html' | 'jupyter' | 'rescript' | 'sql' | 'r' | 'julia' | 'powershell' | 'perl' | 'astro' | 'gdscript' | 'nix' | 'verilog' | 'unknown';
-export interface Node {
-    id: string;
-    kind: NodeKind;
-    name: string;
-    qualifiedName: string;
-    filePath: string;
-    language: Language;
-    startLine: number;
-    endLine: number;
-    startColumn: number;
-    endColumn: number;
-    docstring?: string;
-    signature?: string;
-    visibility?: 'public' | 'private' | 'protected' | 'internal';
-    isExported?: boolean;
-    isAsync?: boolean;
-    isStatic?: boolean;
-    isAbstract?: boolean;
-    decorators?: string[];
-    typeParameters?: string[];
-    updatedAt: number;
-}
-export interface Edge {
-    source: string;
-    target: string;
-    kind: EdgeKind;
-    metadata?: Record<string, unknown>;
-    line?: number;
-    column?: number;
-    confidence?: 'extracted' | 'inferred' | 'ambiguous';
-    confidenceScore?: number;
-}
-export interface FileRecord {
-    path: string;
-    contentHash: string;
-    language: Language;
-    fileSize: number;
-    symbolCount: number;
-    indexedAt: number;
-}
-export interface SearchResult {
-    node: Node;
-    score: number;
-    matchType: 'exact' | 'prefix' | 'fuzzy' | 'semantic';
-}
-export interface SearchOptions {
-    kinds?: NodeKind[];
-    languages?: Language[];
-    limit?: number;
-    minScore?: number;
-}
-export interface Subgraph {
-    nodes: Node[];
-    edges: Edge[];
-    entryPoints: string[];
-}
-export interface NodeContext {
-    node: Node;
-    ancestors: Node[];
-    children: Node[];
-    callers: Node[];
-    callees: Node[];
-}
-export interface NodeMetrics {
-    incomingEdgeCount: number;
-    outgoingEdgeCount: number;
-    callCount: number;
-    callerCount: number;
-    childCount: number;
-}
-export interface GraphStats {
-    files: number;
-    nodes: number;
-    edges: number;
-    nodesByKind: Record<string, number>;
-    filesByLanguage: Record<string, number>;
-    dbSizeBytes: number;
-    embeddingCount: number;
-    embeddableNodeCount: number;
-    embeddingsEnabled: boolean;
-    embeddingModel: string;
-    useVecIndex: boolean;
-    semanticEngine: 'cosine' | 'sqlite-vec' | 'orama' | 'pglite' | 'lancedb' | 'qdrant' | 'typesense';
-    vecIndexCount: number;
-    engineFallback: string | null;
-    frameworks: string[];
-    architectureEnabled: boolean;
-    architectureStats?: {
-        packages: number;
-        layers: number;
-        packageDeps: number;
-    };
-}
-export interface TaskContext {
-    task: string;
-    entryPoints: Node[];
-    relatedNodes: Node[];
-    edges: Edge[];
-    codeSnippets: Map<string, string>;
-    summary: string;
-}
-export interface IndexProgress {
-    phase: 'scanning' | 'parsing' | 'storing' | 'resolving' | 'detecting frameworks' | 'embeddings' | 'architecture' | 'security' | 'docs' | 'data' | 'patterns' | 'retrying';
-    current: number;
-    total: number;
-    currentFile?: string;
-    meta?: Record<string, unknown>;
-}
-export interface IndexResult {
-    success: boolean;
-    filesIndexed: number;
-    nodesCreated: number;
-    edgesCreated: number;
-    errors: string[];
-    duration: number;
-}
-export interface SyncResult {
-    added: string[];
-    modified: string[];
-    removed: string[];
-    nodesCreated: number;
-    nodesUpdated: number;
-    nodesRemoved: number;
-    edgesCreated: number;
-    edgesRemoved: number;
-    filesScanned: number;
-    errors: string[];
-    duration: number;
-}
-export { KiroGraphError, FileError, ParseError, DatabaseError, ConfigError, } from './errors';
-//# sourceMappingURL=types.d.ts.map

package/dist/types.d.ts.map

@@ -1 +0,0 @@
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package/dist/utils.d.ts

@@ -1,52 +0,0 @@
-/**
- * KiroGraph Utility Module
- *
- * Shared utilities: concurrency, batching, rate limiting, memory monitoring,
- * security path validation, and misc helpers.
- */
-export declare class Mutex {
-    private queue;
-    private _locked;
-    acquire(): Promise<() => void>;
-    withLock<T>(fn: () => Promise<T>): Promise<T>;
-    isLocked(): boolean;
-    private _release;
-}
-export declare class FileLock {
-    private readonly lockPath;
-    static readonly STALE_TIMEOUT_MS = 120000;
-    constructor(lockPath: string);
-    acquire(): Promise<() => void>;
-    withLock<T>(fn: () => T): T;
-    withLockAsync<T>(fn: () => Promise<T>): Promise<T>;
-    private _release;
-}
-export declare function processInBatches<T, R>(items: T[], batchSize: number, fn: (batch: T[]) => Promise<R[]>): Promise<R[]>;
-export declare function debounce<T extends (...args: unknown[]) => unknown>(fn: T, delayMs: number): T;
-export declare function throttle<T extends (...args: unknown[]) => unknown>(fn: T, intervalMs: number): T;
-export declare class MemoryMonitor {
-    private readonly thresholdBytes;
-    private readonly intervalMs;
-    private timer;
-    private peakBytes;
-    constructor(opts: {
-        thresholdMb: number;
-        intervalMs: number;
-    });
-    start(): void;
-    stop(): void;
-    /** Returns peak heap usage in bytes. */
-    getPeakUsage(): number;
-}
-/** Resolve and validate that filePath is within root. Returns null if not. */
-export declare function validatePathWithinRoot(filePath: string, root: string): string | null;
-/** Throw if the given path is a sensitive system directory. */
-export declare function validateProjectPath(projectRoot: string): void;
-/** Returns true if filePath is within root (string-based, no symlink resolution). */
-export declare function isPathWithinRoot(filePath: string, root: string): boolean;
-/** Returns true if filePath is within root, resolving symlinks (symlink-safe). */
-export declare function isPathWithinRootReal(filePath: string, root: string): boolean;
-export declare function clamp(value: number, min: number, max: number): number;
-export declare function normalizePath(p: string): string;
-export declare function safeJsonParse<T>(json: string, fallback: T): T;
-//# sourceMappingURL=utils.d.ts.map

package/dist/utils.d.ts.map

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package/dist/vectors/index.d.ts

@@ -1,79 +0,0 @@
-/**
- * KiroGraph Vector Manager
- *
- * Semantic search via configurable local embedding models using @huggingface/transformers v3.
- * Mirrors CodeGraph src/vectors/ (embedder.ts + manager.ts) adapted for KiroGraph:
- *   - Cache dir: ~/.kirograph/models/ (not ~/.codegraph/models/)
- *   - Embeddings stored in the `vectors` SQLite table
- *   - Cosine similarity search done in-process by default (no extra deps)
- *   - ANN search via sqlite-vec opt-in: set config.useVecIndex = true
- *     (requires `npm install better-sqlite3 sqlite-vec`)
- *   - Disabled by default; opt-in via config.enableEmbeddings = true
- */
-import type { KiroGraphConfig } from '../config';
-import type { Node } from '../types';
-import type { GraphDatabase } from '../db/database';
-export declare class VectorManager {
-    private readonly db;
-    private readonly config;
-    private readonly projectRoot?;
-    private pipeline;
-    private _initialized;
-    private vecIndex;
-    private oramaIndex;
-    private pgliteIndex;
-    private lancedbIndex;
-    private qdrantIndex;
-    private typesenseIndex;
-    private _engineFallback;
-    constructor(db: GraphDatabase, config: KiroGraphConfig, projectRoot?: string | undefined);
-    isInitialized(): boolean;
-    /** Non-null when the configured engine failed to load and cosine is being used instead. */
-    getEngineFallback(): string | null;
-    /**
-     * Load the embedding model. No-op when embeddings are disabled.
-     * Fails silently so callers can continue without semantic search.
-     * When config.useVecIndex is true, also initializes the sqlite-vec ANN index.
-     */
-    initialize(onProgress?: (file: string, loaded: number, total: number, done: boolean) => void): Promise<void>;
-    /**
-     * Embed a single node and persist to the vectors table.
-     * Skips silently when disabled; logs on failure without throwing.
-     */
-    embedNode(node: Node): Promise<void>;
-    /** Number of entries currently in the active ANN/hybrid index (0 when not in use). */
-    vecIndexCount(): Promise<number>;
-    /**
-     * Remove embeddings for the given node IDs from the active index.
-     * For cosine the `vectors` SQLite table is cleaned up automatically via FK cascade
-     * when nodes are deleted. For sqlite-vec, orama, and pglite the engine itself is
-     * the sole store of record, so we delete from it explicitly here.
-     */
-    deleteEmbeddings(nodeIds: string[]): Promise<void>;
-    /**
-     * Embed all eligible nodes in the database that don't yet have embeddings.
-     * Streams nodes in pages to avoid loading the entire node set into memory —
-     * critical for large codebases (100K+ symbols) where a single getAllNodes()
-     * call can exhaust the Node.js heap or the WASM linear memory.
-     *
-     * Uses dynamic batch sizing: starts at BATCH_SIZE, halves on OOM errors,
-     * and recovers back to full size after successful batches.
-     *
-     * Emits a pre-flight warning via onProgress when the embeddable node count
-     * exceeds LARGE_CODEBASE_THRESHOLD so the CLI can surface it to the user.
-     */
-    embedAll(onProgress?: (current: number, total: number) => void): Promise<number>;
-    /**
-     * Semantic search: embed the query and return top-N nodes by similarity.
-     *
-     * When sqlite-vec is available (useVecIndex: true), delegates ANN search to
-     * VecIndex (fast, sub-linear). Otherwise falls back to in-process cosine
-     * similarity over all stored embeddings (linear scan, no extra deps).
-     *
-     * Returns empty array when not initialized.
-     */
-    search(query: string, topN?: number): Promise<Node[]>;
-    /** Release engine resources (e.g. kill Qdrant child process). */
-    close(): void;
-}
-//# sourceMappingURL=index.d.ts.map

package/dist/vectors/index.d.ts.map

@@ -1 +0,0 @@
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package/dist/vectors/lancedb-index.d.ts

@@ -1,50 +0,0 @@
-/**
- * KiroGraph LanceDB Index
- *
- * ANN vector search backed by @lancedb/lancedb (Apache Arrow / Lance format).
- * The database is persisted to .kirograph/lancedb/ (Lance columnar file storage).
- *
- * Opt-in: set config.semanticEngine = 'lancedb'
- * Required optional dependency (not installed by default):
- *   npm install @lancedb/lancedb
- *
- * Key characteristics:
- *   - Pure JS/WASM, no native compilation required
- *   - Columnar storage (Apache Lance format) — efficient for batch reads/writes
- *   - ANN search via IVF-PQ or HNSW index for sub-linear query time
- *   - Native upsert via mergeInsert (single round-trip, no delete+insert dance)
- */
-import type { Node } from '../types';
-export declare class LanceDBIndex {
-    private readonly kirographDir;
-    private readonly dim;
-    private db;
-    private table;
-    private _available;
-    private dbPath;
-    constructor(kirographDir: string, dim?: number);
-    isAvailable(): boolean;
-    /**
-     * Load @lancedb/lancedb, open the file-persisted database, and open or create
-     * the kg_nodes table. Silent no-op when the optional dep is missing.
-     */
-    initialize(): Promise<void>;
-    /**
-     * Insert or update a node using LanceDB's native mergeInsert — a single
-     * round-trip that updates the row if node_id exists, inserts it otherwise.
-     */
-    upsert(node: Node, embedding: Float32Array): Promise<void>;
-    /**
-     * Remove a node's record from the index.
-     */
-    delete(nodeId: string): Promise<void>;
-    /**
-     * ANN vector search. Returns node IDs ordered by cosine similarity (descending).
-     */
-    search(queryVec: Float32Array, topN?: number): Promise<string[]>;
-    /** Return all node IDs currently stored in the index. */
-    getEmbeddedNodeIds(): Promise<string[]>;
-    /** Number of records currently in the index. */
-    count(): Promise<number>;
-}
-//# sourceMappingURL=lancedb-index.d.ts.map

package/dist/vectors/lancedb-index.d.ts.map

@@ -1 +0,0 @@
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package/dist/vectors/orama-index.d.ts

@@ -1,54 +0,0 @@
-/**
- * KiroGraph Orama Index
- *
- * Hybrid search (full-text + vector) backed by @orama/orama.
- * The index is persisted to .kirograph/orama.json via @orama/plugin-data-persistence.
- *
- * Opt-in: set config.semanticEngine = 'orama'
- * Required optional dependencies (not installed by default):
- *   npm install @orama/orama @orama/plugin-data-persistence
- *
- * Key advantage over cosine/sqlite-vec: Orama combines full-text relevance and
- * vector similarity in a single hybrid query, producing higher-quality results
- * than running the two searches separately and merging by priority.
- */
-import type { Node } from '../types';
-export declare class OramaIndex {
-    private readonly kirographDir;
-    private readonly dim;
-    private db;
-    private _available;
-    private indexPath;
-    private orama;
-    private persistence;
-    constructor(kirographDir: string, dim?: number);
-    isAvailable(): boolean;
-    /**
-     * Load @orama/orama + @orama/plugin-data-persistence, then either restore
-     * the persisted index from orama.json or create a fresh one.
-     * Silent no-op when optional deps are missing.
-     */
-    initialize(): Promise<void>;
-    /**
-     * Insert or replace a node's document in the index.
-     * Orama has no native upsert, so we remove any existing doc first.
-     */
-    upsert(node: Node, embedding: Float32Array): Promise<void>;
-    /**
-     * Remove a node's document from the index.
-     */
-    delete(nodeId: string): Promise<void>;
-    /**
-     * Hybrid search: combines full-text relevance on name/kind/filePath/signature
-     * with vector similarity on the embedding field.
-     * Returns node IDs ordered by Orama's combined score (best first).
-     */
-    search(queryText: string, queryVec: Float32Array, topN?: number): Promise<string[]>;
-    /** Persist the in-memory index to .kirograph/orama.json. */
-    save(): Promise<void>;
-    /** Return all node IDs currently stored in the index. */
-    getEmbeddedNodeIds(): Promise<string[]>;
-    /** Number of documents currently in the index. */
-    count(): Promise<number>;
-}
-//# sourceMappingURL=orama-index.d.ts.map

package/dist/vectors/orama-index.d.ts.map

@@ -1 +0,0 @@
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package/dist/vectors/pglite-index.d.ts

@@ -1,53 +0,0 @@
-/**
- * KiroGraph PGLite Index
- *
- * Hybrid search (full-text + exact vector) backed by @electric-sql/pglite + pgvector.
- * The database is persisted to .kirograph/pglite/ (PGLite's WAL-based file storage).
- *
- * Opt-in: set config.semanticEngine = 'pglite'
- * Required optional dependency (not installed by default):
- *   npm install @electric-sql/pglite
- *
- * Key advantages over other engines:
- *   - Pure WASM, no native compilation required (unlike sqlite-vec)
- *   - Exact nearest-neighbour search (deterministic, unlike ANN approximation)
- *   - Native SQL upsert via ON CONFLICT — no remove+insert dance (unlike Orama)
- *   - HNSW index for fast approximate search when the table grows large
- *   - Full-text search via PostgreSQL tsvector + ts_rank combined in one query
- */
-import type { Node } from '../types';
-export declare class PGliteIndex {
-    private readonly kirographDir;
-    private readonly dim;
-    private db;
-    private _available;
-    private dbPath;
-    constructor(kirographDir: string, dim?: number);
-    isAvailable(): boolean;
-    /**
-     * Load @electric-sql/pglite, open the file-persisted database, enable pgvector,
-     * and apply the schema (idempotent — safe to call on every startup).
-     * Silent no-op when the optional dep is missing.
-     */
-    initialize(): Promise<void>;
-    /**
-     * Insert or update a node's record using PostgreSQL's native ON CONFLICT upsert.
-     */
-    upsert(node: Node, embedding: Float32Array): Promise<void>;
-    /**
-     * Remove a node's record from the index.
-     */
-    delete(nodeId: string): Promise<void>;
-    /**
-     * Hybrid search: combines pgvector cosine distance with PostgreSQL full-text
-     * ranking in a single SQL query. Returns node IDs ordered by combined score.
-     *
-     * Score = VECTOR_WEIGHT × (1 - cosine_distance) + FTS_WEIGHT × ts_rank
-     */
-    search(queryText: string, queryVec: Float32Array, topN?: number): Promise<string[]>;
-    /** Return all node IDs currently stored in the index. */
-    getEmbeddedNodeIds(): Promise<string[]>;
-    /** Number of documents currently in the index. */
-    count(): Promise<number>;
-}
-//# sourceMappingURL=pglite-index.d.ts.map

package/dist/vectors/pglite-index.d.ts.map

@@ -1 +0,0 @@
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