jbrowse-plugin-mafviewer 1.4.2 → 1.4.5

package/dist/BgzipTaffyAdapter/util.js

@@ -1,22 +0,0 @@
-export function parseLineByLine(buffer, cb) {
-    let blockStart = 0;
-    const entries = [];
-    const decoder = new TextDecoder('utf8');
-    while (blockStart < buffer.length) {
-        const n = buffer.indexOf(10, blockStart);
-        if (n === -1) {
-            break;
-        }
-        const b = buffer.subarray(blockStart, n);
-        const line = decoder.decode(b).trim();
-        if (line) {
-            const entry = cb(line);
-            if (entry) {
-                entries.push(entry);
-            }
-        }
-        blockStart = n + 1;
-    }
-    return entries;
-}
-//# sourceMappingURL=util.js.map

package/dist/BgzipTaffyAdapter/util.js.map

@@ -1 +0,0 @@
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package/dist/BgzipTaffyAdapter/virtualOffset.d.ts

@@ -1,8 +0,0 @@
-export default class VirtualOffset {
-    blockPosition: number;
-    dataPosition: number;
-    constructor(blockPosition: number, dataPosition: number);
-    toString(): string;
-    compareTo(b: VirtualOffset): number;
-}
-export declare function fromBytes(bytes: Uint8Array, offset?: number): VirtualOffset;

package/dist/BgzipTaffyAdapter/virtualOffset.js

@@ -1,23 +0,0 @@
-export default class VirtualOffset {
-    blockPosition;
-    dataPosition;
-    constructor(blockPosition, dataPosition) {
-        this.blockPosition = blockPosition; // < offset of the compressed data block
-        this.dataPosition = dataPosition; // < offset into the uncompressed data
-    }
-    toString() {
-        return `${this.blockPosition}:${this.dataPosition}`;
-    }
-    compareTo(b) {
-        return (this.blockPosition - b.blockPosition || this.dataPosition - b.dataPosition);
-    }
-}
-export function fromBytes(bytes, offset = 0) {
-    return new VirtualOffset(bytes[offset + 7] * 0x10000000000 +
-        bytes[offset + 6] * 0x100000000 +
-        bytes[offset + 5] * 0x1000000 +
-        bytes[offset + 4] * 0x10000 +
-        bytes[offset + 3] * 0x100 +
-        bytes[offset + 2], (bytes[offset + 1] << 8) | bytes[offset]);
-}
-//# sourceMappingURL=virtualOffset.js.map

package/dist/BgzipTaffyAdapter/virtualOffset.js.map

@@ -1 +0,0 @@
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package/dist/LinearMafRenderer/components/ReactComponent.d.ts

@@ -1,9 +0,0 @@
-import React from 'react';
-type SerializedRBush = any;
-declare const LinearMafRendering: (props: {
-    width: number;
-    height: number;
-    displayModel: any;
-    rbush: SerializedRBush;
-}) => React.JSX.Element;
-export default LinearMafRendering;

package/dist/LinearMafRenderer/components/ReactComponent.js

@@ -1,47 +0,0 @@
-import React, { useMemo, useRef } from 'react';
-import { PrerenderedCanvas } from '@jbrowse/core/ui';
-import { observer } from 'mobx-react';
-import RBush from 'rbush';
-const LinearMafRendering = observer(function (props) {
-    const { displayModel, height, rbush } = props;
-    const ref = useRef(null);
-    const rbush2 = useMemo(() => new RBush().fromJSON(rbush), [rbush]);
-    function getFeatureUnderMouse(eventClientX, eventClientY) {
-        let offsetX = 0;
-        let offsetY = 0;
-        if (ref.current) {
-            const r = ref.current.getBoundingClientRect();
-            offsetX = eventClientX - r.left;
-            offsetY = eventClientY - r.top;
-        }
-        const x = rbush2.search({
-            minX: offsetX,
-            maxX: offsetX + 1,
-            minY: offsetY,
-            maxY: offsetY + 1,
-        });
-        if (x.length) {
-            // prioritize insertions
-            const { minX, minY, maxX, maxY, ...rest } = x.find(f => f.isInsertion) || x[0];
-            return rest;
-        }
-        else {
-            return undefined;
-        }
-    }
-    return (React.createElement("div", { ref: ref, onMouseMove: e => displayModel.setHoveredInfo?.(getFeatureUnderMouse(e.clientX, e.clientY)), onMouseLeave: () => {
-            displayModel.setHoveredInfo?.(undefined);
-        }, onMouseOut: () => {
-            displayModel.setHoveredInfo?.(undefined);
-        }, style: {
-            overflow: 'visible',
-            position: 'relative',
-            height,
-        } },
-        React.createElement(PrerenderedCanvas, { ...props, style: {
-                position: 'absolute',
-                left: 0,
-            } })));
-});
-export default LinearMafRendering;
-//# sourceMappingURL=ReactComponent.js.map

package/dist/LinearMafRenderer/components/ReactComponent.js.map

@@ -1 +0,0 @@
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package/dist/LinearMafRenderer/components/util.d.ts

@@ -1 +0,0 @@
-export declare function minElt<T>(arr: Iterable<T>, cb: (arg: T) => number): T | undefined;

package/dist/LinearMafRenderer/components/util.js

@@ -1,13 +0,0 @@
-export function minElt(arr, cb) {
-    let min = Infinity;
-    let minElement;
-    for (const entry of arr) {
-        const val = cb(entry);
-        if (val < min) {
-            min = val;
-            minElement = entry;
-        }
-    }
-    return minElement;
-}
-//# sourceMappingURL=util.js.map

package/dist/LinearMafRenderer/components/util.js.map

@@ -1 +0,0 @@
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