jbrowse-plugin-graphgenomeviewer 7.4.2 → 7.4.4

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Files changed (122) hide show
  1. package/README.md +53 -24
  2. package/dist/chunks/{AddTrackWorkflow-LK25EC3H.js → AddTrackWorkflow-NLSZYK56.js} +2 -2
  3. package/dist/chunks/{GbzBaseSyntenyAdapter-BVLBK4OO.js → GbzBaseSyntenyAdapter-A5MNPCKX.js} +2 -2
  4. package/dist/chunks/{GbzBaseSyntenyAdapter-BVLBK4OO.js.map → GbzBaseSyntenyAdapter-A5MNPCKX.js.map} +1 -1
  5. package/dist/chunks/{GraphGenomeView-UCOAMRF7.js → GraphGenomeView-SEAPDRXS.js} +2 -2
  6. package/dist/chunks/{GraphTrackSettingsDialog-MR7X75EY.js → GraphTrackSettingsDialog-EVIIGC5G.js} +2 -2
  7. package/dist/chunks/{HighlightColorDialog-ZBAZDYIR.js → HighlightColorDialog-QAYWLO5I.js} +2 -2
  8. package/dist/chunks/{LinearGraphDisplay-AJ5OZN27.js → LinearGraphDisplay-ZC4BQ27J.js} +2 -2
  9. package/dist/chunks/MinigraphBubbleAdapter-3QM4XV47.js +2 -0
  10. package/dist/chunks/{MinigraphBubbleAdapter-PEQK5NII.js.map → MinigraphBubbleAdapter-3QM4XV47.js.map} +1 -1
  11. package/dist/chunks/{RgfaTabixAdapter-Q63YLPK4.js → RgfaTabixAdapter-XSOIEWBK.js} +2 -2
  12. package/dist/chunks/WalkFormsAdapter-FT2SW4H6.js +2 -0
  13. package/dist/chunks/WalkFormsAdapter-FT2SW4H6.js.map +7 -0
  14. package/dist/chunks/{WalkTabixSyntenyAdapter-N5PFI4LS.js → WalkTabixSyntenyAdapter-3WRVNDLB.js} +2 -2
  15. package/dist/chunks/{chunk-2XZYJLCE.js → chunk-2KVE7YAS.js} +1 -1
  16. package/dist/chunks/{chunk-2XZYJLCE.js.map → chunk-2KVE7YAS.js.map} +1 -1
  17. package/dist/chunks/{chunk-RCXOOBLX.js → chunk-6SWXMRAV.js} +1 -1
  18. package/dist/chunks/{chunk-RCXOOBLX.js.map → chunk-6SWXMRAV.js.map} +1 -1
  19. package/dist/chunks/{chunk-WY5W5X62.js → chunk-6VNU7SD4.js} +2 -2
  20. package/dist/chunks/{chunk-WY5W5X62.js.map → chunk-6VNU7SD4.js.map} +1 -1
  21. package/dist/chunks/{chunk-DXNE2CFX.js → chunk-6WUWQX2P.js} +2 -2
  22. package/dist/chunks/{chunk-DXNE2CFX.js.map → chunk-6WUWQX2P.js.map} +1 -1
  23. package/dist/chunks/{chunk-ZG2CQXOW.js → chunk-7RJMG6I2.js} +2 -2
  24. package/dist/chunks/{chunk-ZG2CQXOW.js.map → chunk-7RJMG6I2.js.map} +1 -1
  25. package/dist/chunks/chunk-FTXDTU27.js +3 -0
  26. package/dist/chunks/chunk-FTXDTU27.js.map +7 -0
  27. package/dist/chunks/chunk-G53BI7VK.js +2 -0
  28. package/dist/chunks/{chunk-MEMUEG5Z.js.map → chunk-G53BI7VK.js.map} +4 -4
  29. package/dist/chunks/chunk-GRTN25B6.js +3 -0
  30. package/dist/chunks/chunk-GRTN25B6.js.map +7 -0
  31. package/dist/chunks/{chunk-62AHPP6H.js → chunk-HCDKP3IP.js} +2 -2
  32. package/dist/chunks/{chunk-62AHPP6H.js.map → chunk-HCDKP3IP.js.map} +1 -1
  33. package/dist/chunks/{chunk-HI3YK2SO.js → chunk-HF4H6LQI.js} +2 -2
  34. package/dist/chunks/{chunk-MVVXRZXV.js → chunk-JRJHXLGP.js} +2 -2
  35. package/dist/chunks/{chunk-MVVXRZXV.js.map → chunk-JRJHXLGP.js.map} +2 -2
  36. package/dist/chunks/{chunk-LFTZNUXB.js → chunk-KIYRMZWP.js} +2 -2
  37. package/dist/chunks/{chunk-LFTZNUXB.js.map → chunk-KIYRMZWP.js.map} +1 -1
  38. package/dist/chunks/{chunk-WJGCVNGH.js → chunk-LE43I4PT.js} +2 -2
  39. package/dist/chunks/{chunk-U5PIXAF2.js → chunk-LE7FZM6Y.js} +2 -2
  40. package/dist/chunks/{chunk-U5PIXAF2.js.map → chunk-LE7FZM6Y.js.map} +1 -1
  41. package/dist/chunks/chunk-MUONTMYZ.js +2 -0
  42. package/dist/chunks/chunk-MUONTMYZ.js.map +7 -0
  43. package/dist/chunks/{chunk-SFYSQ52W.js → chunk-OJWBLPPH.js} +2 -2
  44. package/dist/chunks/{chunk-JSRGX4TC.js → chunk-P3FBI5ML.js} +1 -1
  45. package/dist/chunks/{chunk-JSRGX4TC.js.map → chunk-P3FBI5ML.js.map} +1 -1
  46. package/dist/chunks/chunk-QV7SSOMJ.js +2 -0
  47. package/dist/chunks/chunk-S333HOG5.js +2 -0
  48. package/dist/chunks/chunk-S333HOG5.js.map +7 -0
  49. package/dist/chunks/{chunk-QJ43NDYS.js → chunk-TYV6UXJA.js} +2 -2
  50. package/dist/chunks/chunk-VZQ6VOUP.js +2 -0
  51. package/dist/chunks/chunk-VZQ6VOUP.js.map +7 -0
  52. package/dist/chunks/chunk-WLRRI35A.js +3 -0
  53. package/dist/chunks/chunk-WLRRI35A.js.map +7 -0
  54. package/dist/chunks/{chunk-PUREF4BM.js → chunk-XXBE4IFZ.js} +2 -2
  55. package/dist/chunks/{chunk-PUREF4BM.js.map → chunk-XXBE4IFZ.js.map} +1 -1
  56. package/dist/chunks/{renderSvg-Z7YIXVQ5.js → renderSvg-ZIUOPWJQ.js} +2 -2
  57. package/dist/jbrowse-plugin-graphgenomeviewer.esm.js +3 -4
  58. package/dist/jbrowse-plugin-graphgenomeviewer.esm.js.map +4 -4
  59. package/package.json +3 -3
  60. package/src/GraphGenomeView/model.test.ts +2 -109
  61. package/src/GraphGenomeView/pane/fitViews.ts +0 -109
  62. package/src/GraphGenomeView/pane/graphViews.ts +0 -4
  63. package/src/GraphGenomeView/pane/launchActions.ts +0 -22
  64. package/src/GraphGenomeView/pane/loadActions.ts +1 -1
  65. package/src/GraphGenomeView/pane/paneBase.ts +0 -7
  66. package/src/GraphGenomeView/viewModel.ts +0 -3
  67. package/src/RgfaTabixAdapter/configSchema.ts +3 -3
  68. package/src/RgfaTabixAdapter/walkFiles.test.ts +6 -6
  69. package/src/WalkFormsAdapter/WalkFormsAdapter.test.ts +204 -0
  70. package/src/WalkFormsAdapter/WalkFormsAdapter.ts +232 -0
  71. package/src/WalkFormsAdapter/configSchema.ts +127 -0
  72. package/src/WalkFormsAdapter/formRows.test.ts +258 -0
  73. package/src/WalkFormsAdapter/formRows.ts +231 -0
  74. package/src/WalkFormsAdapter/formsMenu.test.ts +237 -0
  75. package/src/WalkFormsAdapter/formsMenu.ts +202 -0
  76. package/src/WalkFormsAdapter/index.ts +21 -0
  77. package/src/WalkFormsAdapter/pinned.ts +33 -0
  78. package/src/WalkTabixSyntenyAdapter/WalkTabixSyntenyAdapter.test.ts +5 -5
  79. package/src/WalkTabixSyntenyAdapter/configSchema.ts +2 -2
  80. package/src/index.ts +4 -0
  81. package/src/panSNAliases/panSNAliases.test.ts +2 -2
  82. package/src/version.ts +1 -1
  83. package/dist/chunks/MinigraphBubbleAdapter-PEQK5NII.js +0 -2
  84. package/dist/chunks/chunk-55DIX25J.js +0 -3
  85. package/dist/chunks/chunk-55DIX25J.js.map +0 -7
  86. package/dist/chunks/chunk-AWGMTI73.js +0 -3
  87. package/dist/chunks/chunk-AWGMTI73.js.map +0 -7
  88. package/dist/chunks/chunk-FWVXBJ64.js +0 -3
  89. package/dist/chunks/chunk-FWVXBJ64.js.map +0 -7
  90. package/dist/chunks/chunk-J3AXN7JQ.js +0 -2
  91. package/dist/chunks/chunk-MEMUEG5Z.js +0 -2
  92. package/dist/chunks/chunk-Q3BXNKEL.js +0 -2
  93. package/dist/chunks/chunk-Q3BXNKEL.js.map +0 -7
  94. package/dist/chunks/chunk-S75MFZDE.js +0 -2
  95. package/dist/chunks/chunk-S75MFZDE.js.map +0 -7
  96. /package/dist/chunks/{AddTrackWorkflow-LK25EC3H.js.map → AddTrackWorkflow-NLSZYK56.js.map} +0 -0
  97. /package/dist/chunks/{GraphGenomeView-UCOAMRF7.js.map → GraphGenomeView-SEAPDRXS.js.map} +0 -0
  98. /package/dist/chunks/{GraphTrackSettingsDialog-MR7X75EY.js.map → GraphTrackSettingsDialog-EVIIGC5G.js.map} +0 -0
  99. /package/dist/chunks/{HighlightColorDialog-ZBAZDYIR.js.map → HighlightColorDialog-QAYWLO5I.js.map} +0 -0
  100. /package/dist/chunks/{LinearGraphDisplay-AJ5OZN27.js.map → LinearGraphDisplay-ZC4BQ27J.js.map} +0 -0
  101. /package/dist/chunks/{RgfaTabixAdapter-Q63YLPK4.js.map → RgfaTabixAdapter-XSOIEWBK.js.map} +0 -0
  102. /package/dist/chunks/{WalkTabixSyntenyAdapter-N5PFI4LS.js.map → WalkTabixSyntenyAdapter-3WRVNDLB.js.map} +0 -0
  103. /package/dist/chunks/{chunk-HI3YK2SO.js.map → chunk-HF4H6LQI.js.map} +0 -0
  104. /package/dist/chunks/{chunk-WJGCVNGH.js.map → chunk-LE43I4PT.js.map} +0 -0
  105. /package/dist/chunks/{chunk-SFYSQ52W.js.map → chunk-OJWBLPPH.js.map} +0 -0
  106. /package/dist/chunks/{chunk-J3AXN7JQ.js.map → chunk-QV7SSOMJ.js.map} +0 -0
  107. /package/dist/chunks/{chunk-QJ43NDYS.js.map → chunk-TYV6UXJA.js.map} +0 -0
  108. /package/dist/chunks/{renderSvg-Z7YIXVQ5.js.map → renderSvg-ZIUOPWJQ.js.map} +0 -0
  109. /package/src/RgfaTabixAdapter/test_data/{walks4_follow.GRCh38.walks.bed.gz → walks5_follow.GRCh38.walks.bed.gz} +0 -0
  110. /package/src/RgfaTabixAdapter/test_data/{walks4_follow.GRCh38.walks.bed.gz.tbi → walks5_follow.GRCh38.walks.bed.gz.tbi} +0 -0
  111. /package/src/RgfaTabixAdapter/test_data/{walks4_header.GRCh38.walks.bed.gz → walks5_header.GRCh38.walks.bed.gz} +0 -0
  112. /package/src/RgfaTabixAdapter/test_data/{walks4_header.GRCh38.walks.bed.gz.tbi → walks5_header.GRCh38.walks.bed.gz.tbi} +0 -0
  113. /package/src/RgfaTabixAdapter/test_data/{walks4_inversion.GRCh38.walks.bed.gz → walks5_inversion.GRCh38.walks.bed.gz} +0 -0
  114. /package/src/RgfaTabixAdapter/test_data/{walks4_inversion.GRCh38.walks.bed.gz.tbi → walks5_inversion.GRCh38.walks.bed.gz.tbi} +0 -0
  115. /package/src/RgfaTabixAdapter/test_data/{walks4_lanepairs.GRCh38.walks.bed.gz → walks5_lanepairs.GRCh38.walks.bed.gz} +0 -0
  116. /package/src/RgfaTabixAdapter/test_data/{walks4_lanepairs.GRCh38.walks.bed.gz.tbi → walks5_lanepairs.GRCh38.walks.bed.gz.tbi} +0 -0
  117. /package/src/RgfaTabixAdapter/test_data/{walks4_maxnode.GRCh38.walks.bed.gz → walks5_maxnode.GRCh38.walks.bed.gz} +0 -0
  118. /package/src/RgfaTabixAdapter/test_data/{walks4_maxnode.GRCh38.walks.bed.gz.tbi → walks5_maxnode.GRCh38.walks.bed.gz.tbi} +0 -0
  119. /package/src/RgfaTabixAdapter/test_data/{walks4_rejoin.GRCh38.walks.bed.gz → walks5_rejoin.GRCh38.walks.bed.gz} +0 -0
  120. /package/src/RgfaTabixAdapter/test_data/{walks4_rejoin.GRCh38.walks.bed.gz.tbi → walks5_rejoin.GRCh38.walks.bed.gz.tbi} +0 -0
  121. /package/src/RgfaTabixAdapter/test_data/{walks4_twopart.GRCh38.walks.bed.gz → walks5_twopart.GRCh38.walks.bed.gz} +0 -0
  122. /package/src/RgfaTabixAdapter/test_data/{walks4_twopart.GRCh38.walks.bed.gz.tbi → walks5_twopart.GRCh38.walks.bed.gz.tbi} +0 -0