image-js 1.0.0-alpha.2 → 1.0.0

package/lib-esm/operations/threshold.d.ts

@@ -1,19 +0,0 @@
-import { Image } from '../Image';
-export declare enum ThresholdAlgorithm {
-    OTSU = "OTSU",
-    TRIANGLE = "TRIANGLE"
-}
-interface IThresholdOptionsBase {
-    out?: Image;
-}
-export interface IThresholdOptions extends IThresholdOptionsBase {
-    threshold: number;
-}
-export interface IThresholdOptionsAlgorithm extends IThresholdOptionsBase {
-    algorithm: ThresholdAlgorithm;
-}
-export declare function computeThreshold(image: Image, algorithm: ThresholdAlgorithm): number;
-export declare function threshold(image: Image, options: IThresholdOptions): Image;
-export declare function threshold(image: Image, options: IThresholdOptionsAlgorithm): Image;
-export {};
-//# sourceMappingURL=threshold.d.ts.map

package/lib-esm/operations/threshold.d.ts.map

@@ -1 +0,0 @@
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package/lib-esm/operations/threshold.js

@@ -1,53 +0,0 @@
-import { validateValue } from '../utils/validators';
-import { getOutputImage } from '../utils/getOutputImage';
-import { otsu } from './thresholds/otsu';
-import { triangle } from './thresholds/triangle';
-// TODO: convert more algorithms to TS.
-export var ThresholdAlgorithm;
-(function (ThresholdAlgorithm) {
-    // HUANG,
-    // INTERMODES,
-    // ISODATA,
-    // LI,
-    // MAX_ENTROPY,
-    // MEAN,
-    // MIN_ERROR,
-    // MINIMUM,
-    // MOMENTS,
-    ThresholdAlgorithm["OTSU"] = "OTSU";
-    // PERCENTILE,
-    // RENYI_ENTROPY,
-    // SHANBHAG,
-    ThresholdAlgorithm["TRIANGLE"] = "TRIANGLE";
-    // YEN
-})(ThresholdAlgorithm || (ThresholdAlgorithm = {}));
-export function computeThreshold(image, algorithm) {
-    if (image.channels !== 1) {
-        throw new Error('threshold can only be computed on images with one channel');
-    }
-    const histogram = image.histogram();
-    switch (algorithm) {
-        case ThresholdAlgorithm.OTSU:
-            return otsu(histogram, image.size);
-        case ThresholdAlgorithm.TRIANGLE:
-            return triangle(histogram);
-        default:
-            throw new RangeError(`unsupported threshold algorithm: ${algorithm}`);
-    }
-}
-export function threshold(image, options) {
-    let thresholdValue;
-    if ('threshold' in options) {
-        thresholdValue = options.threshold;
-    }
-    else {
-        thresholdValue = computeThreshold(image, options.algorithm);
-    }
-    validateValue(thresholdValue, image);
-    const result = getOutputImage(image, options);
-    for (let i = 0; i < image.data.length; i++) {
-        result.data[i] = image.data[i] > thresholdValue ? image.maxValue : 0;
-    }
-    return result;
-}
-//# sourceMappingURL=threshold.js.map

package/lib-esm/operations/threshold.js.map

@@ -1 +0,0 @@
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package/lib-esm/operations/thresholds/otsu.d.ts

@@ -1,2 +0,0 @@
-export declare function otsu(histogramCounts: number[], total: number): number;
-//# sourceMappingURL=otsu.d.ts.map

package/lib-esm/operations/thresholds/otsu.d.ts.map

@@ -1 +0,0 @@
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package/lib-esm/operations/thresholds/otsu.js

@@ -1,32 +0,0 @@
-/*
- * The method is present in: Otsu, N (1979), "A threshold selection method from gray-level histograms", IEEE Trans. Sys., Man., Cyber. 9: 62-66
- * The Otsu implementation is based on: https://en.wikipedia.org/wiki/Otsu's_method
- * @param histogram - the histogram of the image
- * @returns {number} - the threshold
- */
-export function otsu(histogramCounts, total) {
-    let sumB = 0;
-    let wB = 0;
-    let maximum = 0;
-    let level = 0;
-    let sum1 = 0;
-    for (let i = 0; i < histogramCounts.length; i++) {
-        sum1 += i * histogramCounts[i];
-    }
-    for (let ii = 0; ii < histogramCounts.length; ii++) {
-        wB = wB + histogramCounts[ii];
-        const wF = total - wB;
-        if (wB === 0 || wF === 0) {
-            continue;
-        }
-        sumB = sumB + ii * histogramCounts[ii];
-        const mF = (sum1 - sumB) / wF;
-        const between = wB * wF * (sumB / wB - mF) * (sumB / wB - mF);
-        if (between >= maximum) {
-            level = ii;
-            maximum = between;
-        }
-    }
-    return level;
-}
-//# sourceMappingURL=otsu.js.map

package/lib-esm/operations/thresholds/otsu.js.map

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package/lib-esm/operations/thresholds/triangle.d.ts

@@ -1,2 +0,0 @@
-export declare function triangle(histogram: number[]): number;
-//# sourceMappingURL=triangle.d.ts.map

package/lib-esm/operations/thresholds/triangle.d.ts.map

@@ -1 +0,0 @@
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package/lib-esm/operations/thresholds/triangle.js

@@ -1,103 +0,0 @@
-// see https://github.com/fiji/Auto_Threshold/blob/master/src/main/java/fiji/threshold/Auto_Threshold.java
-// Zack, G. W., Rogers, W. E. and Latt, S. A., 1977,
-// Automatic Measurement of Sister Chromatid Exchange Frequency,
-// Journal of Histochemistry and Cytochemistry 25 (7), pp. 741-753
-//
-//  modified from Johannes Schindelin plugin
-export function triangle(histogram) {
-    // find min and max
-    let min = 0;
-    let dmax = 0;
-    let max = 0;
-    let min2 = 0;
-    for (let i = 0; i < histogram.length; i++) {
-        if (histogram[i] > 0) {
-            min = i;
-            break;
-        }
-    }
-    if (min > 0) {
-        // line to the (p==0) point, not to histogram[min]
-        min--;
-    }
-    // The Triangle algorithm cannot tell whether the data is skewed to one side or another.
-    // This causes a problem as there are 2 possible thresholds between the max and the 2 extremes
-    // of the histogram.
-    // Here I propose to find out to which side of the max point the data is furthest, and use that as
-    //  the other extreme.
-    for (let i = histogram.length - 1; i > 0; i--) {
-        if (histogram[i] > 0) {
-            min2 = i;
-            break;
-        }
-    }
-    if (min2 < histogram.length - 1) {
-        // line to the (p==0) point, not to data[min]
-        min2++;
-    }
-    for (let i = 0; i < histogram.length; i++) {
-        if (histogram[i] > dmax) {
-            max = i;
-            dmax = histogram[i];
-        }
-    }
-    // find which is the furthest side
-    let inverted = false;
-    if (max - min < min2 - max) {
-        // reverse the histogram
-        inverted = true;
-        let left = 0; // index of leftmost element
-        let right = histogram.length - 1; // index of rightmost element
-        while (left < right) {
-            // exchange the left and right elements
-            const temp = histogram[left];
-            histogram[left] = histogram[right];
-            histogram[right] = temp;
-            // move the bounds toward the center
-            left++;
-            right--;
-        }
-        min = histogram.length - 1 - min2;
-        max = histogram.length - 1 - max;
-    }
-    if (min === max) {
-        return min;
-    }
-    // describe line by nx * x + ny * y - d = 0
-    let nx, ny, d;
-    // nx is just the max frequency as the other point has freq=0
-    nx = histogram[max]; // -min; // data[min]; //  lowest value bmin = (p=0)% in the image
-    ny = min - max;
-    d = Math.sqrt(nx * nx + ny * ny);
-    nx /= d;
-    ny /= d;
-    d = nx * min + ny * histogram[min];
-    // find split point
-    let split = min;
-    let splitDistance = 0;
-    for (let i = min + 1; i <= max; i++) {
-        const newDistance = nx * i + ny * histogram[i] - d;
-        if (newDistance > splitDistance) {
-            split = i;
-            splitDistance = newDistance;
-        }
-    }
-    split--;
-    if (inverted) {
-        // The histogram might be used for something else, so let's reverse it back
-        let left = 0;
-        let right = histogram.length - 1;
-        while (left < right) {
-            const temp = histogram[left];
-            histogram[left] = histogram[right];
-            histogram[right] = temp;
-            left++;
-            right--;
-        }
-        return histogram.length - 1 - split;
-    }
-    else {
-        return split;
-    }
-}
-//# sourceMappingURL=triangle.js.map

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package/lib-esm/save/encode.d.ts

@@ -1,35 +0,0 @@
-import { Image } from '../Image';
-import { IEncodePngOptions } from './encodePng';
-import { IEncodeJpegOptions } from './encodeJpeg';
-export declare enum ImageFormat {
-    png = "png",
-    jpg = "jpg",
-    jpeg = "jpeg"
-}
-export interface IEncodeOptionsPng {
-    format: ImageFormat.png;
-    encoderOptions?: IEncodePngOptions;
-}
-export interface IEncodeOptionsJpeg {
-    format: ImageFormat.jpg | ImageFormat.jpeg;
-    encoderOptions?: IEncodeJpegOptions;
-}
-/**
- * Encodes the image to an output format.
- * Defaults to PNG.
- * @param image - Image to encode.
- */
-export declare function encode(image: Image): Uint8Array;
-/**
- * Encodes the image to PNG.
- * @param image - Image to encode.
- * @param options - Format and options passed to the PNG encoder.
- */
-export declare function encode(image: Image, options: IEncodeOptionsPng): Uint8Array;
-/**
- * Encodes the image to JPEG.
- * @param image - Image to encode.
- * @param options - Format and options passed to the JPEG encoder.
- */
-export declare function encode(image: Image, options: IEncodeOptionsJpeg): Uint8Array;
-//# sourceMappingURL=encode.d.ts.map

package/lib-esm/save/encode.d.ts.map

@@ -1 +0,0 @@
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package/lib-esm/save/encode.js

@@ -1,22 +0,0 @@
-import { encodePng } from './encodePng';
-import { encodeJpeg } from './encodeJpeg';
-export var ImageFormat;
-(function (ImageFormat) {
-    ImageFormat["png"] = "png";
-    ImageFormat["jpg"] = "jpg";
-    ImageFormat["jpeg"] = "jpeg";
-})(ImageFormat || (ImageFormat = {}));
-const defaultPng = { format: ImageFormat.png };
-export function encode(image, options = defaultPng) {
-    if (options.format === ImageFormat.png) {
-        return encodePng(image, options.encoderOptions);
-    }
-    else if (options.format === ImageFormat.jpg ||
-        options.format === ImageFormat.jpeg) {
-        return encodeJpeg(image, options.encoderOptions);
-    }
-    else {
-        throw new RangeError(`unknown format: ${options.format}`);
-    }
-}
-//# sourceMappingURL=encode.js.map

package/lib-esm/save/encode.js.map

@@ -1 +0,0 @@
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package/lib-esm/save/encodeJpeg.d.ts

@@ -1,6 +0,0 @@
-import { Image } from '../Image';
-export interface IEncodeJpegOptions {
-    quality?: number;
-}
-export declare function encodeJpeg(image: Image, options?: IEncodeJpegOptions): Uint8Array;
-//# sourceMappingURL=encodeJpeg.d.ts.map

package/lib-esm/save/encodeJpeg.d.ts.map

@@ -1 +0,0 @@
-{"version":3,"file":"encodeJpeg.d.ts","sourceRoot":"","sources":["../../src/save/encodeJpeg.ts"],"names":[],"mappings":"AAEA,OAAO,EAAE,KAAK,EAAyB,MAAM,UAAU,CAAC;AAExD,MAAM,WAAW,kBAAkB;IACjC,OAAO,CAAC,EAAE,MAAM,CAAC;CAClB;AAED,wBAAgB,UAAU,CACxB,KAAK,EAAE,KAAK,EACZ,OAAO,GAAE,kBAAuB,GAC/B,UAAU,CAcZ"}

package/lib-esm/save/encodeJpeg.js

@@ -1,16 +0,0 @@
-import { encode } from 'jpeg-js';
-import { ImageKind, ColorDepth } from '../Image';
-export function encodeJpeg(image, options = {}) {
-    const { quality = 50 } = options;
-    if (image.kind !== ImageKind.RGBA) {
-        image = image.convertColor(ImageKind.RGBA);
-    }
-    if (image.depth !== ColorDepth.UINT8) {
-        image = image.convertDepth(ColorDepth.UINT8);
-    }
-    // Image data after depth conversion will always be UInt8Array
-    // @ts-ignore
-    const buffer = encode(image, quality).data;
-    return new Uint8Array(buffer, buffer.byteOffset, buffer.byteLength);
-}
-//# sourceMappingURL=encodeJpeg.js.map

package/lib-esm/save/encodeJpeg.js.map

@@ -1 +0,0 @@
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package/lib-esm/save/encodePng.d.ts

@@ -1,5 +0,0 @@
-import { IPNGEncoderOptions } from 'fast-png';
-import { Image } from '../Image';
-export declare type IEncodePngOptions = IPNGEncoderOptions;
-export declare function encodePng(image: Image, options?: IPNGEncoderOptions): Uint8Array;
-//# sourceMappingURL=encodePng.d.ts.map

package/lib-esm/save/encodePng.d.ts.map

@@ -1 +0,0 @@
-{"version":3,"file":"encodePng.d.ts","sourceRoot":"","sources":["../../src/save/encodePng.ts"],"names":[],"mappings":"AAAA,OAAO,EAAU,kBAAkB,EAAE,MAAM,UAAU,CAAC;AAEtD,OAAO,EAAE,KAAK,EAAE,MAAM,UAAU,CAAC;AAEjC,oBAAY,iBAAiB,GAAG,kBAAkB,CAAC;AAEnD,wBAAgB,SAAS,CACvB,KAAK,EAAE,KAAK,EACZ,OAAO,CAAC,EAAE,kBAAkB,GAC3B,UAAU,CAEZ"}

package/lib-esm/save/encodePng.js

@@ -1,5 +0,0 @@
-import { encode } from 'fast-png';
-export function encodePng(image, options) {
-    return encode(image, options);
-}
-//# sourceMappingURL=encodePng.js.map

package/lib-esm/save/encodePng.js.map

@@ -1 +0,0 @@
-{"version":3,"file":"encodePng.js","sourceRoot":"","sources":["../../src/save/encodePng.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,MAAM,EAAsB,MAAM,UAAU,CAAC;AAMtD,MAAM,UAAU,SAAS,CACvB,KAAY,EACZ,OAA4B;IAE5B,OAAO,MAAM,CAAC,KAAK,EAAE,OAAO,CAAC,CAAC;AAChC,CAAC"}

package/lib-esm/save/index.d.ts

@@ -1,6 +0,0 @@
-export * from './encode';
-export * from './encodePng';
-export * from './encodeJpeg';
-export * from './write';
-export * from './writeCanvas';
-//# sourceMappingURL=index.d.ts.map

package/lib-esm/save/index.d.ts.map

@@ -1 +0,0 @@
-{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../src/save/index.ts"],"names":[],"mappings":"AAAA,cAAc,UAAU,CAAC;AACzB,cAAc,aAAa,CAAC;AAC5B,cAAc,cAAc,CAAC;AAC7B,cAAc,SAAS,CAAC;AACxB,cAAc,eAAe,CAAC"}

package/lib-esm/save/index.js

@@ -1,6 +0,0 @@
-export * from './encode';
-export * from './encodePng';
-export * from './encodeJpeg';
-export * from './write';
-export * from './writeCanvas';
-//# sourceMappingURL=index.js.map

package/lib-esm/save/index.js.map

@@ -1 +0,0 @@
-{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/save/index.ts"],"names":[],"mappings":"AAAA,cAAc,UAAU,CAAC;AACzB,cAAc,aAAa,CAAC;AAC5B,cAAc,cAAc,CAAC;AAC7B,cAAc,SAAS,CAAC;AACxB,cAAc,eAAe,CAAC"}

package/lib-esm/save/write.d.ts

@@ -1,23 +0,0 @@
-import { Image } from '../Image';
-import { IEncodeOptionsPng, IEncodeOptionsJpeg } from './encode';
-/**
- * Write an image to the disk.
- * The file format is determined automatically from the file's extension.
- * If the extension is not supported, an error will be thrown.
- */
-export declare function write(path: string, image: Image): Promise<void>;
-/**
- * Write an image to the disk as PNG.
- * When the `png` format is specified, the file's extension doesn't matter.
- */
-export declare function write(path: string, image: Image, options: IEncodeOptionsPng): Promise<void>;
-/**
- * Write an image to the disk as JPEG.
- * When the `jpeg` format is specified, the file's extension doesn't matter.
- */
-export declare function write(path: string, image: Image, options: IEncodeOptionsJpeg): Promise<void>;
-/**
- * Synchronous version of @see {@link write}.
- */
-export declare function writeSync(path: string, image: Image, options?: IEncodeOptionsPng | IEncodeOptionsJpeg): void;
-//# sourceMappingURL=write.d.ts.map

package/lib-esm/save/write.d.ts.map

@@ -1 +0,0 @@
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package/lib-esm/save/write.js

@@ -1,46 +0,0 @@
-import { writeFile, writeFileSync } from 'fs';
-import { extname } from 'path';
-import { promisify } from 'util';
-import { encode, ImageFormat } from './encode';
-const writeFilePromise = promisify(writeFile);
-export async function write(path, image, options) {
-    const toWrite = getDataToWrite(path, image, options);
-    await writeFilePromise(path, toWrite);
-}
-/**
- * Synchronous version of @see {@link write}.
- */
-export function writeSync(path, image, options) {
-    const toWrite = getDataToWrite(path, image, options);
-    writeFileSync(path, toWrite);
-}
-function getDataToWrite(path, image, options) {
-    let format;
-    if (options === undefined) {
-        const extension = extname(path)
-            .slice(1)
-            .toLowerCase();
-        if (extension === 'png') {
-            format = ImageFormat.png;
-            return encode(image, { format });
-        }
-        else if (extension === 'jpg' || extension === 'jpeg') {
-            format = ImageFormat.jpg;
-            return encode(image, { format });
-        }
-        else {
-            throw new Error('image format could not be determined from file extension. Please use a supported extension or specify the format option');
-        }
-    }
-    else if (options.format === ImageFormat.png) {
-        return encode(image, options);
-    }
-    else if (options.format === ImageFormat.jpg ||
-        options.format === ImageFormat.jpeg) {
-        return encode(image, options);
-    }
-    else {
-        throw new RangeError(`unknown format: ${options.format}`);
-    }
-}
-//# sourceMappingURL=write.js.map

package/lib-esm/save/write.js.map

@@ -1 +0,0 @@
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package/lib-esm/save/writeCanvas.d.ts

@@ -1,15 +0,0 @@
-import { Image } from '../Image';
-export interface IWriteCanvasOptions {
-    /**
-     * If set to `true` (default), the canvas element will be resized to fit the image.
-     */
-    resizeCanvas?: boolean;
-    dx?: number;
-    dy?: number;
-    dirtyX?: number;
-    dirtyY?: number;
-    dirtyWidth?: number;
-    dirtyHeight?: number;
-}
-export declare function writeCanvas(canvas: HTMLCanvasElement, image: Image, options?: IWriteCanvasOptions): void;
-//# sourceMappingURL=writeCanvas.d.ts.map

package/lib-esm/save/writeCanvas.d.ts.map

@@ -1 +0,0 @@
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package/lib-esm/save/writeCanvas.js

@@ -1,19 +0,0 @@
-import { ImageKind } from '../Image';
-export function writeCanvas(canvas, image, options = {}) {
-    if (image.kind !== ImageKind.RGBA) {
-        image = image.convertColor(ImageKind.RGBA);
-    }
-    const { resizeCanvas = true, dx = 0, dy = 0, dirtyX = 0, dirtyY = 0, dirtyWidth = image.width, dirtyHeight = image.height } = options;
-    if (resizeCanvas) {
-        canvas.width = image.width;
-        canvas.height = image.height;
-    }
-    const ctx = canvas.getContext('2d');
-    if (ctx === null) {
-        throw new Error('could not get context from canvas element');
-    }
-    ctx.putImageData(
-    // eslint-disable-next-line no-undef
-    new ImageData(new Uint8ClampedArray(image.data.buffer, image.data.byteOffset, image.data.byteLength), image.width, image.height), dx, dy, dirtyX, dirtyY, dirtyWidth, dirtyHeight);
-}
-//# sourceMappingURL=writeCanvas.js.map

package/lib-esm/save/writeCanvas.js.map

@@ -1 +0,0 @@
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package/lib-esm/types.d.ts

@@ -1,12 +0,0 @@
-export declare enum BorderType {
-    CONSTANT = "CONSTANT",
-    REPLICATE = "REPLICATE",
-    REFLECT = "REFLECT",
-    WRAP = "WRAP",
-    REFLECT_101 = "REFLECT_101"
-}
-export declare enum InterpolationType {
-    NEAREST = "NEAREST",
-    BILINEAR = "BILINEAR"
-}
-//# sourceMappingURL=types.d.ts.map

package/lib-esm/types.d.ts.map

@@ -1 +0,0 @@
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package/lib-esm/types.js

@@ -1,14 +0,0 @@
-export var BorderType;
-(function (BorderType) {
-    BorderType["CONSTANT"] = "CONSTANT";
-    BorderType["REPLICATE"] = "REPLICATE";
-    BorderType["REFLECT"] = "REFLECT";
-    BorderType["WRAP"] = "WRAP";
-    BorderType["REFLECT_101"] = "REFLECT_101";
-})(BorderType || (BorderType = {}));
-export var InterpolationType;
-(function (InterpolationType) {
-    InterpolationType["NEAREST"] = "NEAREST";
-    InterpolationType["BILINEAR"] = "BILINEAR";
-})(InterpolationType || (InterpolationType = {}));
-//# sourceMappingURL=types.js.map

package/lib-esm/types.js.map

@@ -1 +0,0 @@
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package/lib-esm/utils/clamp.d.ts

@@ -1,3 +0,0 @@
-import { Image } from '../Image';
-export declare function clamp(value: number, image: Image): number;
-//# sourceMappingURL=clamp.d.ts.map

package/lib-esm/utils/clamp.d.ts.map

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package/lib-esm/utils/clamp.js

@@ -1,4 +0,0 @@
-export function clamp(value, image) {
-    return Math.min(Math.max(value, 0), image.maxValue);
-}
-//# sourceMappingURL=clamp.js.map

package/lib-esm/utils/clamp.js.map

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package/lib-esm/utils/getOutputImage.d.ts

@@ -1,26 +0,0 @@
-import { Image, INewImageOptions } from '../Image';
-export interface IOutOptions {
-    /**
-     * Image to use as the output.
-     * The image must have compatible properties or the method will throw.
-     */
-    out?: Image;
-}
-interface IOutInternalOptions {
-    /**
-     * Parameters that will be combined with the ones from
-     * thisImage`.
-     */
-    newParameters?: INewImageOptions;
-}
-/**
- * Use this function to support getting the output image of an algorithm from
- * user-supplied options.
- * @private
- * @param thisImage - Current image on which the algorithm is applied.
- * @param options - Options object received by the algorithm.
- * @param internalOptions - Some additional private options.
- */
-export declare function getOutputImage(thisImage: Image, options?: IOutOptions, internalOptions?: IOutInternalOptions): Image;
-export {};
-//# sourceMappingURL=getOutputImage.d.ts.map

package/lib-esm/utils/getOutputImage.d.ts.map

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