image-js 0.0.0-next-e30968a2d8
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/LICENSE +21 -0
- package/README.md +29 -0
- package/lib/IJS.d.ts +316 -0
- package/lib/IJS.d.ts.map +1 -0
- package/lib/IJS.js +534 -0
- package/lib/IJS.js.map +1 -0
- package/lib/Mask.d.ts +257 -0
- package/lib/Mask.d.ts.map +1 -0
- package/lib/Mask.js +338 -0
- package/lib/Mask.js.map +1 -0
- package/lib/compute/histogram.d.ts +20 -0
- package/lib/compute/histogram.d.ts.map +1 -0
- package/lib/compute/histogram.js +28 -0
- package/lib/compute/histogram.js.map +1 -0
- package/lib/compute/index.d.ts +2 -0
- package/lib/compute/index.d.ts.map +1 -0
- package/lib/compute/index.js +18 -0
- package/lib/compute/index.js.map +1 -0
- package/lib/filters/and.d.ts +17 -0
- package/lib/filters/and.d.ts.map +1 -0
- package/lib/filters/and.js +29 -0
- package/lib/filters/and.js.map +1 -0
- package/lib/filters/blur.d.ts +37 -0
- package/lib/filters/blur.d.ts.map +1 -0
- package/lib/filters/blur.js +22 -0
- package/lib/filters/blur.js.map +1 -0
- package/lib/filters/convolution.d.ts +79 -0
- package/lib/filters/convolution.d.ts.map +1 -0
- package/lib/filters/convolution.js +196 -0
- package/lib/filters/convolution.js.map +1 -0
- package/lib/filters/derivativeFilter.d.ts +40 -0
- package/lib/filters/derivativeFilter.d.ts.map +1 -0
- package/lib/filters/derivativeFilter.js +42 -0
- package/lib/filters/derivativeFilter.js.map +1 -0
- package/lib/filters/gaussianBlur.d.ts +59 -0
- package/lib/filters/gaussianBlur.d.ts.map +1 -0
- package/lib/filters/gaussianBlur.js +59 -0
- package/lib/filters/gaussianBlur.js.map +1 -0
- package/lib/filters/gradientFilter.d.ts +54 -0
- package/lib/filters/gradientFilter.d.ts.map +1 -0
- package/lib/filters/gradientFilter.js +58 -0
- package/lib/filters/gradientFilter.js.map +1 -0
- package/lib/filters/hypotenuse.d.ts +23 -0
- package/lib/filters/hypotenuse.d.ts.map +1 -0
- package/lib/filters/hypotenuse.js +46 -0
- package/lib/filters/hypotenuse.js.map +1 -0
- package/lib/filters/index.d.ts +11 -0
- package/lib/filters/index.d.ts.map +1 -0
- package/lib/filters/index.js +27 -0
- package/lib/filters/index.js.map +1 -0
- package/lib/filters/invert.d.ts +11 -0
- package/lib/filters/invert.d.ts.map +1 -0
- package/lib/filters/invert.js +37 -0
- package/lib/filters/invert.js.map +1 -0
- package/lib/filters/or.d.ts +17 -0
- package/lib/filters/or.d.ts.map +1 -0
- package/lib/filters/or.js +29 -0
- package/lib/filters/or.js.map +1 -0
- package/lib/filters/subtractImage.d.ts +13 -0
- package/lib/filters/subtractImage.d.ts.map +1 -0
- package/lib/filters/subtractImage.js +64 -0
- package/lib/filters/subtractImage.js.map +1 -0
- package/lib/geometry/index.d.ts +4 -0
- package/lib/geometry/index.d.ts.map +1 -0
- package/lib/geometry/index.js +20 -0
- package/lib/geometry/index.js.map +1 -0
- package/lib/geometry/resize.d.ts +52 -0
- package/lib/geometry/resize.d.ts.map +1 -0
- package/lib/geometry/resize.js +107 -0
- package/lib/geometry/resize.js.map +1 -0
- package/lib/geometry/rotate.d.ts +54 -0
- package/lib/geometry/rotate.d.ts.map +1 -0
- package/lib/geometry/rotate.js +44 -0
- package/lib/geometry/rotate.js.map +1 -0
- package/lib/geometry/transform.d.ts +46 -0
- package/lib/geometry/transform.d.ts.map +1 -0
- package/lib/geometry/transform.js +95 -0
- package/lib/geometry/transform.js.map +1 -0
- package/lib/index.d.ts +10 -0
- package/lib/index.d.ts.map +1 -0
- package/lib/index.js +26 -0
- package/lib/index.js.map +1 -0
- package/lib/load/decode.d.ts +10 -0
- package/lib/load/decode.d.ts.map +1 -0
- package/lib/load/decode.js +33 -0
- package/lib/load/decode.js.map +1 -0
- package/lib/load/decodeJpeg.d.ts +9 -0
- package/lib/load/decodeJpeg.d.ts.map +1 -0
- package/lib/load/decodeJpeg.js +20 -0
- package/lib/load/decodeJpeg.js.map +1 -0
- package/lib/load/decodePng.d.ts +9 -0
- package/lib/load/decodePng.d.ts.map +1 -0
- package/lib/load/decodePng.js +72 -0
- package/lib/load/decodePng.js.map +1 -0
- package/lib/load/decodeTiff.d.ts +9 -0
- package/lib/load/decodeTiff.d.ts.map +1 -0
- package/lib/load/decodeTiff.js +64 -0
- package/lib/load/decodeTiff.js.map +1 -0
- package/lib/load/index.d.ts +8 -0
- package/lib/load/index.d.ts.map +1 -0
- package/lib/load/index.js +24 -0
- package/lib/load/index.js.map +1 -0
- package/lib/load/read.d.ts +17 -0
- package/lib/load/read.d.ts.map +1 -0
- package/lib/load/read.js +31 -0
- package/lib/load/read.js.map +1 -0
- package/lib/load/readCanvas.d.ts +3 -0
- package/lib/load/readCanvas.d.ts.map +1 -0
- package/lib/load/readCanvas.js +17 -0
- package/lib/load/readCanvas.js.map +1 -0
- package/lib/load/readImg.d.ts +3 -0
- package/lib/load/readImg.d.ts.map +1 -0
- package/lib/load/readImg.js +17 -0
- package/lib/load/readImg.js.map +1 -0
- package/lib/morphology/bottomHat.d.ts +19 -0
- package/lib/morphology/bottomHat.d.ts.map +1 -0
- package/lib/morphology/bottomHat.js +46 -0
- package/lib/morphology/bottomHat.js.map +1 -0
- package/lib/morphology/cannyEdgeDetector.d.ts +49 -0
- package/lib/morphology/cannyEdgeDetector.d.ts.map +1 -0
- package/lib/morphology/cannyEdgeDetector.js +157 -0
- package/lib/morphology/cannyEdgeDetector.js.map +1 -0
- package/lib/morphology/clearBorder.d.ts +22 -0
- package/lib/morphology/clearBorder.d.ts.map +1 -0
- package/lib/morphology/clearBorder.js +89 -0
- package/lib/morphology/clearBorder.js.map +1 -0
- package/lib/morphology/close.d.ts +19 -0
- package/lib/morphology/close.d.ts.map +1 -0
- package/lib/morphology/close.js +41 -0
- package/lib/morphology/close.js.map +1 -0
- package/lib/morphology/dilate.d.ts +20 -0
- package/lib/morphology/dilate.d.ts.map +1 -0
- package/lib/morphology/dilate.js +199 -0
- package/lib/morphology/dilate.js.map +1 -0
- package/lib/morphology/erode.d.ts +20 -0
- package/lib/morphology/erode.d.ts.map +1 -0
- package/lib/morphology/erode.js +199 -0
- package/lib/morphology/erode.js.map +1 -0
- package/lib/morphology/floodFill.d.ts +22 -0
- package/lib/morphology/floodFill.d.ts.map +1 -0
- package/lib/morphology/floodFill.js +20 -0
- package/lib/morphology/floodFill.js.map +1 -0
- package/lib/morphology/index.d.ts +11 -0
- package/lib/morphology/index.d.ts.map +1 -0
- package/lib/morphology/index.js +27 -0
- package/lib/morphology/index.js.map +1 -0
- package/lib/morphology/morphologicalGradient.d.ts +19 -0
- package/lib/morphology/morphologicalGradient.d.ts.map +1 -0
- package/lib/morphology/morphologicalGradient.js +43 -0
- package/lib/morphology/morphologicalGradient.js.map +1 -0
- package/lib/morphology/open.d.ts +19 -0
- package/lib/morphology/open.d.ts.map +1 -0
- package/lib/morphology/open.js +43 -0
- package/lib/morphology/open.js.map +1 -0
- package/lib/morphology/topHat.d.ts +19 -0
- package/lib/morphology/topHat.d.ts.map +1 -0
- package/lib/morphology/topHat.js +44 -0
- package/lib/morphology/topHat.js.map +1 -0
- package/lib/operations/convertColor.d.ts +32 -0
- package/lib/operations/convertColor.d.ts.map +1 -0
- package/lib/operations/convertColor.js +148 -0
- package/lib/operations/convertColor.js.map +1 -0
- package/lib/operations/convertDepth.d.ts +10 -0
- package/lib/operations/convertDepth.d.ts.map +1 -0
- package/lib/operations/convertDepth.js +60 -0
- package/lib/operations/convertDepth.js.map +1 -0
- package/lib/operations/copyTo.d.ts +29 -0
- package/lib/operations/copyTo.d.ts.map +1 -0
- package/lib/operations/copyTo.js +51 -0
- package/lib/operations/copyTo.js.map +1 -0
- package/lib/operations/grey.d.ts +50 -0
- package/lib/operations/grey.d.ts.map +1 -0
- package/lib/operations/grey.js +86 -0
- package/lib/operations/grey.js.map +1 -0
- package/lib/operations/greyAlgorithms.d.ts +149 -0
- package/lib/operations/greyAlgorithms.d.ts.map +1 -0
- package/lib/operations/greyAlgorithms.js +242 -0
- package/lib/operations/greyAlgorithms.js.map +1 -0
- package/lib/operations/index.d.ts +8 -0
- package/lib/operations/index.d.ts.map +1 -0
- package/lib/operations/index.js +24 -0
- package/lib/operations/index.js.map +1 -0
- package/lib/operations/merge.d.ts +9 -0
- package/lib/operations/merge.d.ts.map +1 -0
- package/lib/operations/merge.js +51 -0
- package/lib/operations/merge.js.map +1 -0
- package/lib/operations/split.d.ts +9 -0
- package/lib/operations/split.d.ts.map +1 -0
- package/lib/operations/split.js +23 -0
- package/lib/operations/split.js.map +1 -0
- package/lib/operations/threshold.d.ts +58 -0
- package/lib/operations/threshold.d.ts.map +1 -0
- package/lib/operations/threshold.js +114 -0
- package/lib/operations/threshold.js.map +1 -0
- package/lib/operations/thresholds/huang.d.ts +8 -0
- package/lib/operations/thresholds/huang.d.ts.map +1 -0
- package/lib/operations/thresholds/huang.js +81 -0
- package/lib/operations/thresholds/huang.js.map +1 -0
- package/lib/operations/thresholds/intermodes.d.ts +8 -0
- package/lib/operations/thresholds/intermodes.d.ts.map +1 -0
- package/lib/operations/thresholds/intermodes.js +62 -0
- package/lib/operations/thresholds/intermodes.js.map +1 -0
- package/lib/operations/thresholds/isodata.d.ts +8 -0
- package/lib/operations/thresholds/isodata.d.ts.map +1 -0
- package/lib/operations/thresholds/isodata.js +55 -0
- package/lib/operations/thresholds/isodata.js.map +1 -0
- package/lib/operations/thresholds/li.d.ts +9 -0
- package/lib/operations/thresholds/li.d.ts.map +1 -0
- package/lib/operations/thresholds/li.js +77 -0
- package/lib/operations/thresholds/li.js.map +1 -0
- package/lib/operations/thresholds/maxEntropy.d.ts +9 -0
- package/lib/operations/thresholds/maxEntropy.d.ts.map +1 -0
- package/lib/operations/thresholds/maxEntropy.js +80 -0
- package/lib/operations/thresholds/maxEntropy.js.map +1 -0
- package/lib/operations/thresholds/mean.d.ts +9 -0
- package/lib/operations/thresholds/mean.d.ts.map +1 -0
- package/lib/operations/thresholds/mean.js +26 -0
- package/lib/operations/thresholds/mean.js.map +1 -0
- package/lib/operations/thresholds/minError.d.ts +9 -0
- package/lib/operations/thresholds/minError.d.ts.map +1 -0
- package/lib/operations/thresholds/minError.js +90 -0
- package/lib/operations/thresholds/minError.js.map +1 -0
- package/lib/operations/thresholds/minimum.d.ts +8 -0
- package/lib/operations/thresholds/minimum.d.ts.map +1 -0
- package/lib/operations/thresholds/minimum.js +78 -0
- package/lib/operations/thresholds/minimum.js.map +1 -0
- package/lib/operations/thresholds/moments.d.ts +9 -0
- package/lib/operations/thresholds/moments.d.ts.map +1 -0
- package/lib/operations/thresholds/moments.js +62 -0
- package/lib/operations/thresholds/moments.js.map +1 -0
- package/lib/operations/thresholds/otsu.d.ts +9 -0
- package/lib/operations/thresholds/otsu.d.ts.map +1 -0
- package/lib/operations/thresholds/otsu.js +43 -0
- package/lib/operations/thresholds/otsu.js.map +1 -0
- package/lib/operations/thresholds/percentile.d.ts +8 -0
- package/lib/operations/thresholds/percentile.d.ts.map +1 -0
- package/lib/operations/thresholds/percentile.js +39 -0
- package/lib/operations/thresholds/percentile.js.map +1 -0
- package/lib/operations/thresholds/renyiEntropy.d.ts +9 -0
- package/lib/operations/thresholds/renyiEntropy.d.ts.map +1 -0
- package/lib/operations/thresholds/renyiEntropy.js +133 -0
- package/lib/operations/thresholds/renyiEntropy.js.map +1 -0
- package/lib/operations/thresholds/shanbhag.d.ts +10 -0
- package/lib/operations/thresholds/shanbhag.d.ts.map +1 -0
- package/lib/operations/thresholds/shanbhag.js +77 -0
- package/lib/operations/thresholds/shanbhag.js.map +1 -0
- package/lib/operations/thresholds/triangle.d.ts +8 -0
- package/lib/operations/thresholds/triangle.d.ts.map +1 -0
- package/lib/operations/thresholds/triangle.js +113 -0
- package/lib/operations/thresholds/triangle.js.map +1 -0
- package/lib/operations/thresholds/yen.d.ts +9 -0
- package/lib/operations/thresholds/yen.d.ts.map +1 -0
- package/lib/operations/thresholds/yen.js +62 -0
- package/lib/operations/thresholds/yen.js.map +1 -0
- package/lib/roi/RoiManager.d.ts +32 -0
- package/lib/roi/RoiManager.d.ts.map +1 -0
- package/lib/roi/RoiManager.js +10 -0
- package/lib/roi/RoiManager.js.map +1 -0
- package/lib/roi/RoiMapManager.d.ts +33 -0
- package/lib/roi/RoiMapManager.d.ts.map +1 -0
- package/lib/roi/RoiMapManager.js +17 -0
- package/lib/roi/RoiMapManager.js.map +1 -0
- package/lib/roi/colorRois.d.ts +39 -0
- package/lib/roi/colorRois.d.ts.map +1 -0
- package/lib/roi/colorRois.js +48 -0
- package/lib/roi/colorRois.js.map +1 -0
- package/lib/roi/fromMask.d.ts +19 -0
- package/lib/roi/fromMask.d.ts.map +1 -0
- package/lib/roi/fromMask.js +148 -0
- package/lib/roi/fromMask.js.map +1 -0
- package/lib/roi/index.d.ts +5 -0
- package/lib/roi/index.d.ts.map +1 -0
- package/lib/roi/index.js +21 -0
- package/lib/roi/index.js.map +1 -0
- package/lib/roi/utils/colorMaps/getBinaryMap.d.ts +37 -0
- package/lib/roi/utils/colorMaps/getBinaryMap.d.ts.map +1 -0
- package/lib/roi/utils/colorMaps/getBinaryMap.js +34 -0
- package/lib/roi/utils/colorMaps/getBinaryMap.js.map +1 -0
- package/lib/roi/utils/colorMaps/getRainbowMap.d.ts +25 -0
- package/lib/roi/utils/colorMaps/getRainbowMap.d.ts.map +1 -0
- package/lib/roi/utils/colorMaps/getRainbowMap.js +51 -0
- package/lib/roi/utils/colorMaps/getRainbowMap.js.map +1 -0
- package/lib/roi/utils/colorMaps/getSaturationMap.d.ts +42 -0
- package/lib/roi/utils/colorMaps/getSaturationMap.d.ts.map +1 -0
- package/lib/roi/utils/colorMaps/getSaturationMap.js +39 -0
- package/lib/roi/utils/colorMaps/getSaturationMap.js.map +1 -0
- package/lib/roi/utils/constants.d.ts +4 -0
- package/lib/roi/utils/constants.d.ts.map +1 -0
- package/lib/roi/utils/constants.js +7 -0
- package/lib/roi/utils/constants.js.map +1 -0
- package/lib/roi/utils/getColorMap.d.ts +32 -0
- package/lib/roi/utils/getColorMap.d.ts.map +1 -0
- package/lib/roi/utils/getColorMap.js +28 -0
- package/lib/roi/utils/getColorMap.js.map +1 -0
- package/lib/roi/utils/hsvToRgb.d.ts +21 -0
- package/lib/roi/utils/hsvToRgb.d.ts.map +1 -0
- package/lib/roi/utils/hsvToRgb.js +58 -0
- package/lib/roi/utils/hsvToRgb.js.map +1 -0
- package/lib/roi/utils/rgbToNumber.d.ts +8 -0
- package/lib/roi/utils/rgbToNumber.d.ts.map +1 -0
- package/lib/roi/utils/rgbToNumber.js +14 -0
- package/lib/roi/utils/rgbToNumber.js.map +1 -0
- package/lib/save/encode.d.ts +38 -0
- package/lib/save/encode.d.ts.map +1 -0
- package/lib/save/encode.js +33 -0
- package/lib/save/encode.js.map +1 -0
- package/lib/save/encodeJpeg.d.ts +18 -0
- package/lib/save/encodeJpeg.d.ts.map +1 -0
- package/lib/save/encodeJpeg.js +26 -0
- package/lib/save/encodeJpeg.js.map +1 -0
- package/lib/save/encodePng.d.ts +12 -0
- package/lib/save/encodePng.d.ts.map +1 -0
- package/lib/save/encodePng.js +16 -0
- package/lib/save/encodePng.js.map +1 -0
- package/lib/save/index.d.ts +6 -0
- package/lib/save/index.d.ts.map +1 -0
- package/lib/save/index.js +22 -0
- package/lib/save/index.js.map +1 -0
- package/lib/save/write.d.ts +27 -0
- package/lib/save/write.d.ts.map +1 -0
- package/lib/save/write.js +73 -0
- package/lib/save/write.js.map +1 -0
- package/lib/save/writeCanvas.d.ts +42 -0
- package/lib/save/writeCanvas.d.ts.map +1 -0
- package/lib/save/writeCanvas.js +29 -0
- package/lib/save/writeCanvas.js.map +1 -0
- package/lib/utils/boolToNumber.d.ts +9 -0
- package/lib/utils/boolToNumber.d.ts.map +1 -0
- package/lib/utils/boolToNumber.js +21 -0
- package/lib/utils/boolToNumber.js.map +1 -0
- package/lib/utils/borderIterator.d.ts +9 -0
- package/lib/utils/borderIterator.d.ts.map +1 -0
- package/lib/utils/borderIterator.js +25 -0
- package/lib/utils/borderIterator.js.map +1 -0
- package/lib/utils/checkKernel.d.ts +8 -0
- package/lib/utils/checkKernel.d.ts.map +1 -0
- package/lib/utils/checkKernel.js +16 -0
- package/lib/utils/checkKernel.js.map +1 -0
- package/lib/utils/checkProcessable.d.ts +18 -0
- package/lib/utils/checkProcessable.d.ts.map +1 -0
- package/lib/utils/checkProcessable.js +65 -0
- package/lib/utils/checkProcessable.js.map +1 -0
- package/lib/utils/clamp.d.ts +10 -0
- package/lib/utils/clamp.d.ts.map +1 -0
- package/lib/utils/clamp.js +38 -0
- package/lib/utils/clamp.js.map +1 -0
- package/lib/utils/colorModels.d.ts +15 -0
- package/lib/utils/colorModels.d.ts.map +1 -0
- package/lib/utils/colorModels.js +39 -0
- package/lib/utils/colorModels.js.map +1 -0
- package/lib/utils/copyData.d.ts +4 -0
- package/lib/utils/copyData.d.ts.map +1 -0
- package/lib/utils/copyData.js +20 -0
- package/lib/utils/copyData.js.map +1 -0
- package/lib/utils/getIndex.d.ts +12 -0
- package/lib/utils/getIndex.d.ts.map +1 -0
- package/lib/utils/getIndex.js +17 -0
- package/lib/utils/getIndex.js.map +1 -0
- package/lib/utils/getOutputImage.d.ts +61 -0
- package/lib/utils/getOutputImage.d.ts.map +1 -0
- package/lib/utils/getOutputImage.js +150 -0
- package/lib/utils/getOutputImage.js.map +1 -0
- package/lib/utils/interpolateBorder.d.ts +44 -0
- package/lib/utils/interpolateBorder.d.ts.map +1 -0
- package/lib/utils/interpolateBorder.js +143 -0
- package/lib/utils/interpolateBorder.js.map +1 -0
- package/lib/utils/interpolatePixel.d.ts +18 -0
- package/lib/utils/interpolatePixel.d.ts.map +1 -0
- package/lib/utils/interpolatePixel.js +122 -0
- package/lib/utils/interpolatePixel.js.map +1 -0
- package/lib/utils/kernels.d.ts +13 -0
- package/lib/utils/kernels.d.ts.map +1 -0
- package/lib/utils/kernels.js +66 -0
- package/lib/utils/kernels.js.map +1 -0
- package/lib/utils/kinds.d.ts +9 -0
- package/lib/utils/kinds.d.ts.map +1 -0
- package/lib/utils/kinds.js +23 -0
- package/lib/utils/kinds.js.map +1 -0
- package/lib/utils/round.d.ts +2 -0
- package/lib/utils/round.d.ts.map +1 -0
- package/lib/utils/round.js +11 -0
- package/lib/utils/round.js.map +1 -0
- package/lib/utils/validators.d.ts +23 -0
- package/lib/utils/validators.d.ts.map +1 -0
- package/lib/utils/validators.js +40 -0
- package/lib/utils/validators.js.map +1 -0
- package/lib-esm/IJS.d.ts +316 -0
- package/lib-esm/IJS.d.ts.map +1 -0
- package/lib-esm/IJS.js +526 -0
- package/lib-esm/IJS.js.map +1 -0
- package/lib-esm/Mask.d.ts +257 -0
- package/lib-esm/Mask.d.ts.map +1 -0
- package/lib-esm/Mask.js +334 -0
- package/lib-esm/Mask.js.map +1 -0
- package/lib-esm/compute/histogram.d.ts +20 -0
- package/lib-esm/compute/histogram.d.ts.map +1 -0
- package/lib-esm/compute/histogram.js +24 -0
- package/lib-esm/compute/histogram.js.map +1 -0
- package/lib-esm/compute/index.d.ts +2 -0
- package/lib-esm/compute/index.d.ts.map +1 -0
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- package/lib-esm/utils/interpolatePixel.d.ts +18 -0
- package/lib-esm/utils/interpolatePixel.d.ts.map +1 -0
- package/lib-esm/utils/interpolatePixel.js +118 -0
- package/lib-esm/utils/interpolatePixel.js.map +1 -0
- package/lib-esm/utils/kernels.d.ts +13 -0
- package/lib-esm/utils/kernels.d.ts.map +1 -0
- package/lib-esm/utils/kernels.js +63 -0
- package/lib-esm/utils/kernels.js.map +1 -0
- package/lib-esm/utils/kinds.d.ts +9 -0
- package/lib-esm/utils/kinds.d.ts.map +1 -0
- package/lib-esm/utils/kinds.js +20 -0
- package/lib-esm/utils/kinds.js.map +1 -0
- package/lib-esm/utils/round.d.ts +2 -0
- package/lib-esm/utils/round.d.ts.map +1 -0
- package/lib-esm/utils/round.js +7 -0
- package/lib-esm/utils/round.js.map +1 -0
- package/lib-esm/utils/validators.d.ts +23 -0
- package/lib-esm/utils/validators.d.ts.map +1 -0
- package/lib-esm/utils/validators.js +34 -0
- package/lib-esm/utils/validators.js.map +1 -0
- package/package.json +79 -0
- package/src/IJS.ts +758 -0
- package/src/Mask.ts +476 -0
- package/src/compute/histogram.ts +39 -0
- package/src/compute/index.ts +1 -0
- package/src/filters/and.ts +34 -0
- package/src/filters/blur.ts +49 -0
- package/src/filters/convolution.ts +357 -0
- package/src/filters/derivativeFilter.ts +77 -0
- package/src/filters/gaussianBlur.ts +124 -0
- package/src/filters/gradientFilter.ts +106 -0
- package/src/filters/hypotenuse.ts +74 -0
- package/src/filters/index.ts +10 -0
- package/src/filters/invert.ts +47 -0
- package/src/filters/or.ts +34 -0
- package/src/filters/subtractImage.ts +91 -0
- package/src/geometry/index.ts +3 -0
- package/src/geometry/resize.ts +182 -0
- package/src/geometry/rotate.ts +99 -0
- package/src/geometry/transform.ts +169 -0
- package/src/index.ts +9 -0
- package/src/load/decode.ts +33 -0
- package/src/load/decodeJpeg.ts +17 -0
- package/src/load/decodePng.ts +78 -0
- package/src/load/decodeTiff.ts +64 -0
- package/src/load/index.ts +7 -0
- package/src/load/read.ts +27 -0
- package/src/load/readCanvas.ts +17 -0
- package/src/load/readImg.ts +15 -0
- package/src/morphology/bottomHat.ts +66 -0
- package/src/morphology/cannyEdgeDetector.ts +214 -0
- package/src/morphology/clearBorder.ts +116 -0
- package/src/morphology/close.ts +61 -0
- package/src/morphology/dilate.ts +264 -0
- package/src/morphology/erode.ts +264 -0
- package/src/morphology/floodFill.ts +31 -0
- package/src/morphology/index.ts +10 -0
- package/src/morphology/morphologicalGradient.ts +69 -0
- package/src/morphology/open.ts +61 -0
- package/src/morphology/topHat.ts +64 -0
- package/src/operations/convertColor.ts +185 -0
- package/src/operations/convertDepth.ts +59 -0
- package/src/operations/copyTo.ts +107 -0
- package/src/operations/grey.ts +114 -0
- package/src/operations/greyAlgorithms.ts +265 -0
- package/src/operations/index.ts +7 -0
- package/src/operations/merge.ts +52 -0
- package/src/operations/split.ts +19 -0
- package/src/operations/threshold.ts +145 -0
- package/src/operations/thresholds/huang.ts +84 -0
- package/src/operations/thresholds/intermodes.ts +62 -0
- package/src/operations/thresholds/isodata.ts +53 -0
- package/src/operations/thresholds/li.ts +81 -0
- package/src/operations/thresholds/maxEntropy.ts +89 -0
- package/src/operations/thresholds/mean.ts +23 -0
- package/src/operations/thresholds/minError.ts +102 -0
- package/src/operations/thresholds/minimum.ts +78 -0
- package/src/operations/thresholds/moments.ts +60 -0
- package/src/operations/thresholds/otsu.ts +42 -0
- package/src/operations/thresholds/percentile.ts +40 -0
- package/src/operations/thresholds/renyiEntropy.ts +148 -0
- package/src/operations/thresholds/shanbhag.ts +82 -0
- package/src/operations/thresholds/triangle.ts +115 -0
- package/src/operations/thresholds/yen.ts +63 -0
- package/src/roi/RoiManager.ts +34 -0
- package/src/roi/RoiMapManager.ts +48 -0
- package/src/roi/colorRois.ts +69 -0
- package/src/roi/fromMask.ts +184 -0
- package/src/roi/index.ts +4 -0
- package/src/roi/utils/colorMaps/getBinaryMap.ts +72 -0
- package/src/roi/utils/colorMaps/getRainbowMap.ts +65 -0
- package/src/roi/utils/colorMaps/getSaturationMap.ts +80 -0
- package/src/roi/utils/constants.ts +3 -0
- package/src/roi/utils/getColorMap.ts +51 -0
- package/src/roi/utils/hsvToRgb.ts +62 -0
- package/src/roi/utils/rgbToNumber.ts +9 -0
- package/src/save/encode.ts +65 -0
- package/src/save/encodeJpeg.ts +37 -0
- package/src/save/encodePng.ts +16 -0
- package/src/save/index.ts +5 -0
- package/src/save/write.ts +109 -0
- package/src/save/writeCanvas.ts +82 -0
- package/src/utils/boolToNumber.ts +18 -0
- package/src/utils/borderIterator.ts +22 -0
- package/src/utils/checkKernel.ts +13 -0
- package/src/utils/checkProcessable.ts +98 -0
- package/src/utils/clamp.ts +39 -0
- package/src/utils/colorModels.ts +41 -0
- package/src/utils/copyData.ts +23 -0
- package/src/utils/getIndex.ts +19 -0
- package/src/utils/getOutputImage.ts +182 -0
- package/src/utils/interpolateBorder.ts +206 -0
- package/src/utils/interpolatePixel.ts +170 -0
- package/src/utils/kernels.ts +73 -0
- package/src/utils/kinds.ts +27 -0
- package/src/utils/round.ts +6 -0
- package/src/utils/validators.ts +43 -0
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/*
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*
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* see https://github.com/fiji/Auto_Threshold/blob/master/src/main/java/fiji/threshold/Auto_Threshold.java
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* Intermodes: This assumes a bimodal histogram. Implements the thresholding Prewitt, JMS & Mendelsohn, ML (1966),
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* "The analysis of cell images", Annals of the NewYork Academy of Sciences 128: 1035-1053
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*
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*/
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/**
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* Return a threshold for a histogram using Intermodes algorithm.
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*
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* @param histogram - Image histogram.
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* @returns The threshold.
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*/
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export default function intermodes(histogram) {
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const iHisto = histogram.slice();
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let iter = 0;
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while (!bimodalTest(iHisto)) {
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// smooth with a 3 point running mean filter
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let previous = 0;
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let current = 0;
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let next = iHisto[0];
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for (let i = 0; i < histogram.length - 1; i++) {
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previous = current;
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current = next;
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next = iHisto[i + 1];
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iHisto[i] = (previous + current + next) / 3;
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}
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iHisto[histogram.length - 1] = (current + next) / 3;
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iter++;
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if (iter > 10000) {
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throw new Error('Intermodes Threshold not found after 10000 iterations');
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}
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}
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// The threshold is the mean between the two peaks.
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let tt = 0;
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for (let i = 1; i < histogram.length - 1; i++) {
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if (iHisto[i - 1] < iHisto[i] && iHisto[i + 1] < iHisto[i]) {
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tt += i;
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}
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}
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return Math.floor(tt / 2.0);
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}
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function bimodalTest(iHisto) {
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let b = false;
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let modes = 0;
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for (let k = 1; k < iHisto.length - 1; k++) {
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if (iHisto[k - 1] < iHisto[k] && iHisto[k + 1] < iHisto[k]) {
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modes++;
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if (modes > 2) {
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return false;
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}
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}
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}
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if (modes === 2) {
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b = true;
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}
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return b;
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}
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//# sourceMappingURL=intermodes.js.map
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{"version":3,"file":"intermodes.js","sourceRoot":"","sources":["../../../src/operations/thresholds/intermodes.ts"],"names":[],"mappings":"AAAA;;;;;;GAMG;AAEH;;;;;GAKG;AACH,MAAM,CAAC,OAAO,UAAU,UAAU,CAAC,SAAsB;IACvD,MAAM,MAAM,GAAG,SAAS,CAAC,KAAK,EAAE,CAAC;IACjC,IAAI,IAAI,GAAG,CAAC,CAAC;IACb,OAAO,CAAC,WAAW,CAAC,MAAM,CAAC,EAAE;QAC3B,4CAA4C;QAC5C,IAAI,QAAQ,GAAG,CAAC,CAAC;QACjB,IAAI,OAAO,GAAG,CAAC,CAAC;QAChB,IAAI,IAAI,GAAG,MAAM,CAAC,CAAC,CAAC,CAAC;QACrB,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,SAAS,CAAC,MAAM,GAAG,CAAC,EAAE,CAAC,EAAE,EAAE;YAC7C,QAAQ,GAAG,OAAO,CAAC;YACnB,OAAO,GAAG,IAAI,CAAC;YACf,IAAI,GAAG,MAAM,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC;YACrB,MAAM,CAAC,CAAC,CAAC,GAAG,CAAC,QAAQ,GAAG,OAAO,GAAG,IAAI,CAAC,GAAG,CAAC,CAAC;SAC7C;QACD,MAAM,CAAC,SAAS,CAAC,MAAM,GAAG,CAAC,CAAC,GAAG,CAAC,OAAO,GAAG,IAAI,CAAC,GAAG,CAAC,CAAC;QACpD,IAAI,EAAE,CAAC;QACP,IAAI,IAAI,GAAG,KAAK,EAAE;YAChB,MAAM,IAAI,KAAK,CAAC,uDAAuD,CAAC,CAAC;SAC1E;KACF;IAED,mDAAmD;IACnD,IAAI,EAAE,GAAG,CAAC,CAAC;IACX,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,SAAS,CAAC,MAAM,GAAG,CAAC,EAAE,CAAC,EAAE,EAAE;QAC7C,IAAI,MAAM,CAAC,CAAC,GAAG,CAAC,CAAC,GAAG,MAAM,CAAC,CAAC,CAAC,IAAI,MAAM,CAAC,CAAC,GAAG,CAAC,CAAC,GAAG,MAAM,CAAC,CAAC,CAAC,EAAE;YAC1D,EAAE,IAAI,CAAC,CAAC;SACT;KACF;IACD,OAAO,IAAI,CAAC,KAAK,CAAC,EAAE,GAAG,GAAG,CAAC,CAAC;AAC9B,CAAC;AAED,SAAS,WAAW,CAAC,MAAmB;IACtC,IAAI,CAAC,GAAG,KAAK,CAAC;IACd,IAAI,KAAK,GAAG,CAAC,CAAC;IAEd,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,MAAM,CAAC,MAAM,GAAG,CAAC,EAAE,CAAC,EAAE,EAAE;QAC1C,IAAI,MAAM,CAAC,CAAC,GAAG,CAAC,CAAC,GAAG,MAAM,CAAC,CAAC,CAAC,IAAI,MAAM,CAAC,CAAC,GAAG,CAAC,CAAC,GAAG,MAAM,CAAC,CAAC,CAAC,EAAE;YAC1D,KAAK,EAAE,CAAC;YACR,IAAI,KAAK,GAAG,CAAC,EAAE;gBACb,OAAO,KAAK,CAAC;aACd;SACF;KACF;IACD,IAAI,KAAK,KAAK,CAAC,EAAE;QACf,CAAC,GAAG,IAAI,CAAC;KACV;IACD,OAAO,CAAC,CAAC;AACX,CAAC"}
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{"version":3,"file":"isodata.d.ts","sourceRoot":"","sources":["../../../src/operations/thresholds/isodata.ts"],"names":[],"mappings":"AAMA;;;;;GAKG;AACH,MAAM,CAAC,OAAO,UAAU,OAAO,CAAC,SAAS,EAAE,WAAW,GAAG,MAAM,CAwC9D"}
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/*
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* see https://github.com/fiji/Auto_Threshold/blob/master/src/main/java/fiji/threshold/Auto_Threshold.java
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* Isodata: Ridler, TW & Calvard, S (1978), "Picture thresholding using an iterative selection method"
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* IEEE Transactions on Systems, Man and Cybernetics 8: 630-632.
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*
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*/
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/**
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* Return a threshold for a histogram using Isodata algorithm.
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*
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* @param histogram - Image histogram.
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* @returns The threshold.
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*/
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export default function isodata(histogram) {
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let l; // the average grey value of pixels with intensities < g
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let toth; // the the average grey value of pixels with intensities > g
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let totl; // the total the average grey value of pixels with intensities < g
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let h; // the average grey value of pixels with intensities > g
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let g = 0; // threshold value
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for (let i = 1; i < histogram.length; i++) {
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if (histogram[i] > 0) {
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g = i + 1;
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break;
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}
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}
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while (true) {
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l = 0;
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totl = 0;
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for (let i = 0; i < g; i++) {
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totl = totl + histogram[i];
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l = l + histogram[i] * i;
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}
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h = 0;
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toth = 0;
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for (let i = g + 1; i < histogram.length; i++) {
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toth += histogram[i];
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h += histogram[i] * i;
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}
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if (totl > 0 && toth > 0) {
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l /= totl;
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h /= toth;
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if (g === Math.round((l + h) / 2.0)) {
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break;
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}
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}
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g++;
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if (g > histogram.length - 2) {
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throw new Error('Threshold not found');
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}
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}
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return g;
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}
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//# sourceMappingURL=isodata.js.map
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{"version":3,"file":"isodata.js","sourceRoot":"","sources":["../../../src/operations/thresholds/isodata.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AACH;;;;;GAKG;AACH,MAAM,CAAC,OAAO,UAAU,OAAO,CAAC,SAAsB;IACpD,IAAI,CAAC,CAAC,CAAC,wDAAwD;IAC/D,IAAI,IAAI,CAAC,CAAC,4DAA4D;IACtE,IAAI,IAAI,CAAC,CAAC,kEAAkE;IAC5E,IAAI,CAAC,CAAC,CAAC,wDAAwD;IAC/D,IAAI,CAAC,GAAG,CAAC,CAAC,CAAC,kBAAkB;IAE7B,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,SAAS,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE;QACzC,IAAI,SAAS,CAAC,CAAC,CAAC,GAAG,CAAC,EAAE;YACpB,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC;YACV,MAAM;SACP;KACF;IAED,OAAO,IAAI,EAAE;QACX,CAAC,GAAG,CAAC,CAAC;QACN,IAAI,GAAG,CAAC,CAAC;QACT,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,CAAC,EAAE,CAAC,EAAE,EAAE;YAC1B,IAAI,GAAG,IAAI,GAAG,SAAS,CAAC,CAAC,CAAC,CAAC;YAC3B,CAAC,GAAG,CAAC,GAAG,SAAS,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC;SAC1B;QACD,CAAC,GAAG,CAAC,CAAC;QACN,IAAI,GAAG,CAAC,CAAC;QACT,KAAK,IAAI,CAAC,GAAG,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,SAAS,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE;YAC7C,IAAI,IAAI,SAAS,CAAC,CAAC,CAAC,CAAC;YACrB,CAAC,IAAI,SAAS,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC;SACvB;QACD,IAAI,IAAI,GAAG,CAAC,IAAI,IAAI,GAAG,CAAC,EAAE;YACxB,CAAC,IAAI,IAAI,CAAC;YACV,CAAC,IAAI,IAAI,CAAC;YACV,IAAI,CAAC,KAAK,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC,GAAG,GAAG,CAAC,EAAE;gBACnC,MAAM;aACP;SACF;QACD,CAAC,EAAE,CAAC;QACJ,IAAI,CAAC,GAAG,SAAS,CAAC,MAAM,GAAG,CAAC,EAAE;YAC5B,MAAM,IAAI,KAAK,CAAC,qBAAqB,CAAC,CAAC;SACxC;KACF;IACD,OAAO,CAAC,CAAC;AACX,CAAC"}
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/**
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* Return a threshold for a histogram using Li algorithm.
|
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3
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*
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4
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+
* @param histogram - Image histogram.
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5
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* @param total - Number of pixels in the image.
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6
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+
* @returns The threshold.
|
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7
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*/
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8
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export default function li(histogram: Uint32Array, total: number): number;
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//# sourceMappingURL=li.d.ts.map
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{"version":3,"file":"li.d.ts","sourceRoot":"","sources":["../../../src/operations/thresholds/li.ts"],"names":[],"mappings":"AAcA;;;;;;GAMG;AACH,MAAM,CAAC,OAAO,UAAU,EAAE,CAAC,SAAS,EAAE,WAAW,EAAE,KAAK,EAAE,MAAM,GAAG,MAAM,CA2DxE"}
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/*
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2
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* see http://rsb.info.nih.gov/ij/developer/source/ij/process/AutoThresholder.java.html
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3
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+
* The method is present in: Implements Li's Minimum Cross Entropy thresholding method
|
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4
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+
* This implementation is based on the iterative version (Ref. 2nd reference below) of the algorithm.
|
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5
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+
* 1) Li, CH & Lee, CK (1993), "Minimum Cross Entropy Thresholding", Pattern Recognition 26(4): 61 625
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+
* 2) Li, CH & Tam, PKS (1998), "An Iterative Algorithm for Minimum Cross Entropy Thresholding",
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7
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+
* Pattern Recognition Letters 18(8): 771-776
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* 3) Sezgin, M & Sankur, B (2004), "Survey over Image Thresholding Techniques and Quantitative Performance
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* Evaluation",Journal of Electronic Imaging 13(1): 146-165
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* @param histogram - the histogram of the image
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11
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* @param total - the number of pixels in the image
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12
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* @returns {number} - the threshold
|
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*/
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/**
|
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* Return a threshold for a histogram using Li algorithm.
|
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*
|
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* @param histogram - Image histogram.
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* @param total - Number of pixels in the image.
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* @returns The threshold.
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*/
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export default function li(histogram, total) {
|
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let threshold;
|
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23
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let sumBack; /* sum of the background pixels at a given threshold */
|
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let sumObj; /* sum of the object pixels at a given threshold */
|
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let numBack; /* number of background pixels at a given threshold */
|
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let numObj; /* number of object pixels at a given threshold */
|
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let oldThresh;
|
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let newThresh;
|
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let meanBack; /* mean of the background pixels at a given threshold */
|
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let meanObj; /* mean of the object pixels at a given threshold */
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let mean; /* mean gray-level in the image */
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const tolerance = 0.5; /* threshold tolerance */
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let temp;
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/* Calculate the mean gray-level */
|
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mean = 0.0;
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for (let ih = 0; ih < histogram.length; ih++) {
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mean += ih * histogram[ih];
|
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}
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mean /= total;
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/* Initial estimate */
|
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newThresh = mean;
|
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do {
|
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oldThresh = newThresh;
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threshold = (oldThresh + 0.5) | 0; /* range */
|
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/* Calculate the means of background and object pixels */
|
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+
/* Background */
|
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+
sumBack = 0;
|
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numBack = 0;
|
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+
for (let ih = 0; ih <= threshold; ih++) {
|
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sumBack += ih * histogram[ih];
|
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numBack += histogram[ih];
|
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+
}
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+
meanBack = numBack === 0 ? 0.0 : sumBack / numBack;
|
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/* Object */
|
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+
sumObj = 0;
|
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numObj = 0;
|
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for (let ih = threshold + 1; ih < histogram.length; ih++) {
|
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sumObj += ih * histogram[ih];
|
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numObj += histogram[ih];
|
|
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}
|
|
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+
meanObj = numObj === 0 ? 0.0 : sumObj / numObj;
|
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temp = (meanBack - meanObj) / (Math.log(meanBack) - Math.log(meanObj));
|
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if (temp < -Number.EPSILON) {
|
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newThresh = (temp - 0.5) | 0;
|
|
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|
+
}
|
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else {
|
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newThresh = (temp + 0.5) | 0;
|
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}
|
|
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|
+
/* Stop the iterations when the difference between the
|
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|
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new and old threshold values is less than the tolerance */
|
|
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} while (Math.abs(newThresh - oldThresh) > tolerance);
|
|
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|
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return threshold;
|
|
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|
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}
|
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|
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//# sourceMappingURL=li.js.map
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{"version":3,"file":"li.js","sourceRoot":"","sources":["../../../src/operations/thresholds/li.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;GAYG;AAEH;;;;;;GAMG;AACH,MAAM,CAAC,OAAO,UAAU,EAAE,CAAC,SAAsB,EAAE,KAAa;IAC9D,IAAI,SAAS,CAAC;IACd,IAAI,OAAO,CAAC,CAAC,uDAAuD;IACpE,IAAI,MAAM,CAAC,CAAC,mDAAmD;IAC/D,IAAI,OAAO,CAAC,CAAC,sDAAsD;IACnE,IAAI,MAAM,CAAC,CAAC,kDAAkD;IAC9D,IAAI,SAAS,CAAC;IACd,IAAI,SAAS,CAAC;IACd,IAAI,QAAQ,CAAC,CAAC,wDAAwD;IACtE,IAAI,OAAO,CAAC,CAAC,oDAAoD;IACjE,IAAI,IAAI,CAAC,CAAC,kCAAkC;IAC5C,MAAM,SAAS,GAAG,GAAG,CAAC,CAAC,yBAAyB;IAChD,IAAI,IAAI,CAAC;IAET,mCAAmC;IACnC,IAAI,GAAG,GAAG,CAAC;IACX,KAAK,IAAI,EAAE,GAAG,CAAC,EAAE,EAAE,GAAG,SAAS,CAAC,MAAM,EAAE,EAAE,EAAE,EAAE;QAC5C,IAAI,IAAI,EAAE,GAAG,SAAS,CAAC,EAAE,CAAC,CAAC;KAC5B;IAED,IAAI,IAAI,KAAK,CAAC;IACd,sBAAsB;IACtB,SAAS,GAAG,IAAI,CAAC;IAEjB,GAAG;QACD,SAAS,GAAG,SAAS,CAAC;QACtB,SAAS,GAAG,CAAC,SAAS,GAAG,GAAG,CAAC,GAAG,CAAC,CAAC,CAAC,WAAW;QAE9C,yDAAyD;QACzD,gBAAgB;QAChB,OAAO,GAAG,CAAC,CAAC;QACZ,OAAO,GAAG,CAAC,CAAC;QAEZ,KAAK,IAAI,EAAE,GAAG,CAAC,EAAE,EAAE,IAAI,SAAS,EAAE,EAAE,EAAE,EAAE;YACtC,OAAO,IAAI,EAAE,GAAG,SAAS,CAAC,EAAE,CAAC,CAAC;YAC9B,OAAO,IAAI,SAAS,CAAC,EAAE,CAAC,CAAC;SAC1B;QACD,QAAQ,GAAG,OAAO,KAAK,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,OAAO,GAAG,OAAO,CAAC;QAEnD,YAAY;QACZ,MAAM,GAAG,CAAC,CAAC;QACX,MAAM,GAAG,CAAC,CAAC;QACX,KAAK,IAAI,EAAE,GAAG,SAAS,GAAG,CAAC,EAAE,EAAE,GAAG,SAAS,CAAC,MAAM,EAAE,EAAE,EAAE,EAAE;YACxD,MAAM,IAAI,EAAE,GAAG,SAAS,CAAC,EAAE,CAAC,CAAC;YAC7B,MAAM,IAAI,SAAS,CAAC,EAAE,CAAC,CAAC;SACzB;QACD,OAAO,GAAG,MAAM,KAAK,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,MAAM,GAAG,MAAM,CAAC;QAC/C,IAAI,GAAG,CAAC,QAAQ,GAAG,OAAO,CAAC,GAAG,CAAC,IAAI,CAAC,GAAG,CAAC,QAAQ,CAAC,GAAG,IAAI,CAAC,GAAG,CAAC,OAAO,CAAC,CAAC,CAAC;QAEvE,IAAI,IAAI,GAAG,CAAC,MAAM,CAAC,OAAO,EAAE;YAC1B,SAAS,GAAG,CAAC,IAAI,GAAG,GAAG,CAAC,GAAG,CAAC,CAAC;SAC9B;aAAM;YACL,SAAS,GAAG,CAAC,IAAI,GAAG,GAAG,CAAC,GAAG,CAAC,CAAC;SAC9B;QACD;uEAC+D;KAChE,QAAQ,IAAI,CAAC,GAAG,CAAC,SAAS,GAAG,SAAS,CAAC,GAAG,SAAS,EAAE;IAEtD,OAAO,SAAS,CAAC;AACnB,CAAC"}
|
|
@@ -0,0 +1,9 @@
|
|
|
1
|
+
/**
|
|
2
|
+
* Return a threshold for a histogram using maximal enthropy algorithm.
|
|
3
|
+
*
|
|
4
|
+
* @param histogram - Image histogram.
|
|
5
|
+
* @param total - Number of pixels in the image.
|
|
6
|
+
* @returns The threshold.
|
|
7
|
+
*/
|
|
8
|
+
export default function maxEntropy(histogram: Uint32Array, total: number): number;
|
|
9
|
+
//# sourceMappingURL=maxEntropy.d.ts.map
|
|
@@ -0,0 +1 @@
|
|
|
1
|
+
{"version":3,"file":"maxEntropy.d.ts","sourceRoot":"","sources":["../../../src/operations/thresholds/maxEntropy.ts"],"names":[],"mappings":"AAUA;;;;;;GAMG;AACH,MAAM,CAAC,OAAO,UAAU,UAAU,CAChC,SAAS,EAAE,WAAW,EACtB,KAAK,EAAE,MAAM,GACZ,MAAM,CAoER"}
|
|
@@ -0,0 +1,77 @@
|
|
|
1
|
+
/*
|
|
2
|
+
* see http://rsb.info.nih.gov/ij/developer/source/ij/process/AutoThresholder.java.html
|
|
3
|
+
* The method is present in: Implements Kapur-Sahoo-Wong (Maximum Entropy) thresholding method:
|
|
4
|
+
* Kapur, JN; Sahoo, PK & Wong, ACK (1985), "A New Method for Gray-Level Picture Thresholding Using the Entropy of the Histogram",
|
|
5
|
+
* Graphical Models and Image Processing 29(3): 273-285
|
|
6
|
+
* @param histogram - the histogram of the image
|
|
7
|
+
* total - the number of pixels in the image
|
|
8
|
+
* @returns {number} - the threshold
|
|
9
|
+
*/
|
|
10
|
+
/**
|
|
11
|
+
* Return a threshold for a histogram using maximal enthropy algorithm.
|
|
12
|
+
*
|
|
13
|
+
* @param histogram - Image histogram.
|
|
14
|
+
* @param total - Number of pixels in the image.
|
|
15
|
+
* @returns The threshold.
|
|
16
|
+
*/
|
|
17
|
+
export default function maxEntropy(histogram, total) {
|
|
18
|
+
const normHisto = new Array(histogram.length); // normalized histogram
|
|
19
|
+
for (let ih = 0; ih < histogram.length; ih++) {
|
|
20
|
+
normHisto[ih] = histogram[ih] / total;
|
|
21
|
+
}
|
|
22
|
+
const P1 = new Array(histogram.length); // cumulative normalized histogram
|
|
23
|
+
const P2 = new Array(histogram.length);
|
|
24
|
+
P1[0] = normHisto[0];
|
|
25
|
+
P2[0] = 1.0 - P1[0];
|
|
26
|
+
for (let ih = 1; ih < histogram.length; ih++) {
|
|
27
|
+
P1[ih] = P1[ih - 1] + normHisto[ih];
|
|
28
|
+
P2[ih] = 1.0 - P1[ih];
|
|
29
|
+
}
|
|
30
|
+
/* Determine the first non-zero bin */
|
|
31
|
+
let firstBin = 0;
|
|
32
|
+
for (let ih = 0; ih < histogram.length; ih++) {
|
|
33
|
+
if (Math.abs(P1[ih]) >= Number.EPSILON) {
|
|
34
|
+
firstBin = ih;
|
|
35
|
+
break;
|
|
36
|
+
}
|
|
37
|
+
}
|
|
38
|
+
/* Determine the last non-zero bin */
|
|
39
|
+
let lastBin = histogram.length - 1;
|
|
40
|
+
for (let ih = histogram.length - 1; ih >= firstBin; ih--) {
|
|
41
|
+
if (Math.abs(P2[ih]) >= Number.EPSILON) {
|
|
42
|
+
lastBin = ih;
|
|
43
|
+
break;
|
|
44
|
+
}
|
|
45
|
+
}
|
|
46
|
+
// Calculate the total entropy each gray-level
|
|
47
|
+
// and find the threshold that maximizes it
|
|
48
|
+
let threshold = -1;
|
|
49
|
+
let totEnt; // total entropy
|
|
50
|
+
let maxEnt = Number.MIN_VALUE; // max entropy
|
|
51
|
+
let entBack; // entropy of the background pixels at a given threshold
|
|
52
|
+
let entObj; // entropy of the object pixels at a given threshold
|
|
53
|
+
for (let it = firstBin; it <= lastBin; it++) {
|
|
54
|
+
/* Entropy of the background pixels */
|
|
55
|
+
entBack = 0.0;
|
|
56
|
+
for (let ih = 0; ih <= it; ih++) {
|
|
57
|
+
if (histogram[ih] !== 0) {
|
|
58
|
+
entBack -= (normHisto[ih] / P1[it]) * Math.log(normHisto[ih] / P1[it]);
|
|
59
|
+
}
|
|
60
|
+
}
|
|
61
|
+
/* Entropy of the object pixels */
|
|
62
|
+
entObj = 0.0;
|
|
63
|
+
for (let ih = it + 1; ih < histogram.length; ih++) {
|
|
64
|
+
if (histogram[ih] !== 0) {
|
|
65
|
+
entObj -= (normHisto[ih] / P2[it]) * Math.log(normHisto[ih] / P2[it]);
|
|
66
|
+
}
|
|
67
|
+
}
|
|
68
|
+
/* Total entropy */
|
|
69
|
+
totEnt = entBack + entObj;
|
|
70
|
+
if (maxEnt < totEnt) {
|
|
71
|
+
maxEnt = totEnt;
|
|
72
|
+
threshold = it;
|
|
73
|
+
}
|
|
74
|
+
}
|
|
75
|
+
return threshold;
|
|
76
|
+
}
|
|
77
|
+
//# sourceMappingURL=maxEntropy.js.map
|
|
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|
|
|
1
|
+
{"version":3,"file":"maxEntropy.js","sourceRoot":"","sources":["../../../src/operations/thresholds/maxEntropy.ts"],"names":[],"mappings":"AAAA;;;;;;;;GAQG;AAEH;;;;;;GAMG;AACH,MAAM,CAAC,OAAO,UAAU,UAAU,CAChC,SAAsB,EACtB,KAAa;IAEb,MAAM,SAAS,GAAG,IAAI,KAAK,CAAC,SAAS,CAAC,MAAM,CAAC,CAAC,CAAC,uBAAuB;IACtE,KAAK,IAAI,EAAE,GAAG,CAAC,EAAE,EAAE,GAAG,SAAS,CAAC,MAAM,EAAE,EAAE,EAAE,EAAE;QAC5C,SAAS,CAAC,EAAE,CAAC,GAAG,SAAS,CAAC,EAAE,CAAC,GAAG,KAAK,CAAC;KACvC;IAED,MAAM,EAAE,GAAG,IAAI,KAAK,CAAC,SAAS,CAAC,MAAM,CAAC,CAAC,CAAC,kCAAkC;IAC1E,MAAM,EAAE,GAAG,IAAI,KAAK,CAAC,SAAS,CAAC,MAAM,CAAC,CAAC;IACvC,EAAE,CAAC,CAAC,CAAC,GAAG,SAAS,CAAC,CAAC,CAAC,CAAC;IACrB,EAAE,CAAC,CAAC,CAAC,GAAG,GAAG,GAAG,EAAE,CAAC,CAAC,CAAC,CAAC;IAEpB,KAAK,IAAI,EAAE,GAAG,CAAC,EAAE,EAAE,GAAG,SAAS,CAAC,MAAM,EAAE,EAAE,EAAE,EAAE;QAC5C,EAAE,CAAC,EAAE,CAAC,GAAG,EAAE,CAAC,EAAE,GAAG,CAAC,CAAC,GAAG,SAAS,CAAC,EAAE,CAAC,CAAC;QACpC,EAAE,CAAC,EAAE,CAAC,GAAG,GAAG,GAAG,EAAE,CAAC,EAAE,CAAC,CAAC;KACvB;IAED,sCAAsC;IACtC,IAAI,QAAQ,GAAG,CAAC,CAAC;IACjB,KAAK,IAAI,EAAE,GAAG,CAAC,EAAE,EAAE,GAAG,SAAS,CAAC,MAAM,EAAE,EAAE,EAAE,EAAE;QAC5C,IAAI,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,IAAI,MAAM,CAAC,OAAO,EAAE;YACtC,QAAQ,GAAG,EAAE,CAAC;YACd,MAAM;SACP;KACF;IAED,qCAAqC;IACrC,IAAI,OAAO,GAAG,SAAS,CAAC,MAAM,GAAG,CAAC,CAAC;IACnC,KAAK,IAAI,EAAE,GAAG,SAAS,CAAC,MAAM,GAAG,CAAC,EAAE,EAAE,IAAI,QAAQ,EAAE,EAAE,EAAE,EAAE;QACxD,IAAI,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,IAAI,MAAM,CAAC,OAAO,EAAE;YACtC,OAAO,GAAG,EAAE,CAAC;YACb,MAAM;SACP;KACF;IAED,8CAA8C;IAC9C,2CAA2C;IAC3C,IAAI,SAAS,GAAG,CAAC,CAAC,CAAC;IACnB,IAAI,MAAM,CAAC,CAAC,gBAAgB;IAC5B,IAAI,MAAM,GAAG,MAAM,CAAC,SAAS,CAAC,CAAC,cAAc;IAC7C,IAAI,OAAO,CAAC,CAAC,wDAAwD;IACrE,IAAI,MAAM,CAAC,CAAC,oDAAoD;IAEhE,KAAK,IAAI,EAAE,GAAG,QAAQ,EAAE,EAAE,IAAI,OAAO,EAAE,EAAE,EAAE,EAAE;QAC3C,sCAAsC;QACtC,OAAO,GAAG,GAAG,CAAC;QACd,KAAK,IAAI,EAAE,GAAG,CAAC,EAAE,EAAE,IAAI,EAAE,EAAE,EAAE,EAAE,EAAE;YAC/B,IAAI,SAAS,CAAC,EAAE,CAAC,KAAK,CAAC,EAAE;gBACvB,OAAO,IAAI,CAAC,SAAS,CAAC,EAAE,CAAC,GAAG,EAAE,CAAC,EAAE,CAAC,CAAC,GAAG,IAAI,CAAC,GAAG,CAAC,SAAS,CAAC,EAAE,CAAC,GAAG,EAAE,CAAC,EAAE,CAAC,CAAC,CAAC;aACxE;SACF;QAED,kCAAkC;QAClC,MAAM,GAAG,GAAG,CAAC;QACb,KAAK,IAAI,EAAE,GAAG,EAAE,GAAG,CAAC,EAAE,EAAE,GAAG,SAAS,CAAC,MAAM,EAAE,EAAE,EAAE,EAAE;YACjD,IAAI,SAAS,CAAC,EAAE,CAAC,KAAK,CAAC,EAAE;gBACvB,MAAM,IAAI,CAAC,SAAS,CAAC,EAAE,CAAC,GAAG,EAAE,CAAC,EAAE,CAAC,CAAC,GAAG,IAAI,CAAC,GAAG,CAAC,SAAS,CAAC,EAAE,CAAC,GAAG,EAAE,CAAC,EAAE,CAAC,CAAC,CAAC;aACvE;SACF;QAED,mBAAmB;QACnB,MAAM,GAAG,OAAO,GAAG,MAAM,CAAC;QAE1B,IAAI,MAAM,GAAG,MAAM,EAAE;YACnB,MAAM,GAAG,MAAM,CAAC;YAChB,SAAS,GAAG,EAAE,CAAC;SAChB;KACF;IACD,OAAO,SAAS,CAAC;AACnB,CAAC"}
|
|
@@ -0,0 +1,9 @@
|
|
|
1
|
+
/**
|
|
2
|
+
* Return a threshold for a histogram by making its average.
|
|
3
|
+
*
|
|
4
|
+
* @param histogram - Image histogram.
|
|
5
|
+
* @param total - Number of pixels in the image.
|
|
6
|
+
* @returns The threshold.
|
|
7
|
+
*/
|
|
8
|
+
export default function mean(histogram: Uint32Array, total: number): number;
|
|
9
|
+
//# sourceMappingURL=mean.d.ts.map
|
|
@@ -0,0 +1 @@
|
|
|
1
|
+
{"version":3,"file":"mean.d.ts","sourceRoot":"","sources":["../../../src/operations/thresholds/mean.ts"],"names":[],"mappings":"AASA;;;;;;GAMG;AACH,MAAM,CAAC,OAAO,UAAU,IAAI,CAAC,SAAS,EAAE,WAAW,EAAE,KAAK,EAAE,MAAM,GAAG,MAAM,CAM1E"}
|
|
@@ -0,0 +1,23 @@
|
|
|
1
|
+
/*
|
|
2
|
+
* The method is present in: Uses the mean of grey levels as the threshold. It is described in:
|
|
3
|
+
* Glasbey, CA (1993), "An analysis of histogram-based thresholding algorithms",
|
|
4
|
+
* CVGIP: Graphical Models and Image Processing 55: 532-537
|
|
5
|
+
* @param histogram - the histogram of the image
|
|
6
|
+
* @param total - the number of pixels in the image
|
|
7
|
+
* @returns {number} - the threshold
|
|
8
|
+
*/
|
|
9
|
+
/**
|
|
10
|
+
* Return a threshold for a histogram by making its average.
|
|
11
|
+
*
|
|
12
|
+
* @param histogram - Image histogram.
|
|
13
|
+
* @param total - Number of pixels in the image.
|
|
14
|
+
* @returns The threshold.
|
|
15
|
+
*/
|
|
16
|
+
export default function mean(histogram, total) {
|
|
17
|
+
let sum = 0;
|
|
18
|
+
for (let i = 0; i < histogram.length; i++) {
|
|
19
|
+
sum += i * histogram[i];
|
|
20
|
+
}
|
|
21
|
+
return Math.floor(sum / total);
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}
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{"version":3,"file":"mean.js","sourceRoot":"","sources":["../../../src/operations/thresholds/mean.ts"],"names":[],"mappings":"AAAA;;;;;;;GAOG;AAEH;;;;;;GAMG;AACH,MAAM,CAAC,OAAO,UAAU,IAAI,CAAC,SAAsB,EAAE,KAAa;IAChE,IAAI,GAAG,GAAG,CAAC,CAAC;IACZ,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,SAAS,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE;QACzC,GAAG,IAAI,CAAC,GAAG,SAAS,CAAC,CAAC,CAAC,CAAC;KACzB;IACD,OAAO,IAAI,CAAC,KAAK,CAAC,GAAG,GAAG,KAAK,CAAC,CAAC;AACjC,CAAC"}
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/**
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* Return a threshold for a histogram using Li algorithm.
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*
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* @param histogram - Image histogram.
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* @param total - Number of pixels in the image.
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* @returns The threshold.
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*/
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export default function minError(histogram: Uint32Array, total: number): number;
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//# sourceMappingURL=minError.d.ts.map
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{"version":3,"file":"minError.d.ts","sourceRoot":"","sources":["../../../src/operations/thresholds/minError.ts"],"names":[],"mappings":"AASA;;;;;;GAMG;AACH,MAAM,CAAC,OAAO,UAAU,QAAQ,CAC9B,SAAS,EAAE,WAAW,EACtB,KAAK,EAAE,MAAM,GACZ,MAAM,CAwDR"}
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/*
|
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* see http://rsb.info.nih.gov/ij/developer/source/ij/process/AutoThresholder.java.html
|
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* The method is present in: An iterative implementation of Kittler and Illingworth's Minimum Error
|
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* thresholding:Kittler, J & Illingworth, J (1986), "Minimum error thresholding", Pattern Recognition 19: 41-47
|
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* @param histogram - the histogram of the image
|
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* @param total - the number of pixels in the image
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* @returns {number} - the threshold
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*/
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/**
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* Return a threshold for a histogram using Li algorithm.
|
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*
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* @param histogram - Image histogram.
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* @param total - Number of pixels in the image.
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* @returns The threshold.
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*/
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export default function minError(histogram, total) {
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let threshold;
|
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let Tprev = -2;
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|
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let mu, nu, p, q, sigma2, tau2, w0, w1, w2, sqterm, temp;
|
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/* Calculate the mean gray-level */
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let mean = 0.0;
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for (let ih = 0; ih < histogram.length; ih++) {
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mean += ih * histogram[ih];
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}
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mean /= total;
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threshold = mean;
|
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|
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while (threshold !== Tprev) {
|
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|
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// Calculate some statistics.
|
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const sumA1 = sumA(histogram, threshold);
|
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const sumA2 = sumA(histogram, histogram.length - 1);
|
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31
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const sumB1 = sumB(histogram, threshold);
|
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|
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const sumB2 = sumB(histogram, histogram.length - 1);
|
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33
|
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const sumC1 = sumC(histogram, threshold);
|
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34
|
+
const sumC2 = sumC(histogram, histogram.length - 1);
|
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|
+
mu = sumB1 / sumA1;
|
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nu = (sumB2 - sumB1) / (sumA2 - sumA1);
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+
p = sumA1 / sumA2;
|
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38
|
+
q = (sumA2 - sumA1) / sumA2;
|
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|
+
sigma2 = sumC1 / sumA1 - mu * mu;
|
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|
+
tau2 = (sumC2 - sumC1) / (sumA2 - sumA1) - nu * nu;
|
|
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|
+
// The terms of the quadratic equation to be solved.
|
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|
+
w0 = 1.0 / sigma2 - 1.0 / tau2;
|
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|
+
w1 = mu / sigma2 - nu / tau2;
|
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44
|
+
w2 =
|
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45
|
+
(mu * mu) / sigma2 -
|
|
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|
+
(nu * nu) / tau2 +
|
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|
+
Math.log10((sigma2 * (q * q)) / (tau2 * (p * p)));
|
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|
+
// If the next threshold would be imaginary, return with the current one.
|
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|
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sqterm = w1 * w1 - w0 * w2;
|
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+
if (sqterm < 0) {
|
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return threshold;
|
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|
+
}
|
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// The updated threshold is the integer part of the solution of the quadratic equation.
|
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|
+
Tprev = threshold;
|
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|
+
temp = (w1 + Math.sqrt(sqterm)) / w0;
|
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|
+
if (isNaN(temp)) {
|
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threshold = Tprev;
|
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+
}
|
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+
else {
|
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threshold = Math.floor(temp);
|
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}
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}
|
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return threshold;
|
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}
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// aux func
|
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function sumA(y, j) {
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let x = 0;
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for (let i = 0; i <= j; i++) {
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x += y[i];
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}
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return x;
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}
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function sumB(y, j) {
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let x = 0;
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for (let i = 0; i <= j; i++) {
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x += i * y[i];
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}
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return x;
|
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}
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function sumC(y, j) {
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let x = 0;
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for (let i = 0; i <= j; i++) {
|
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x += i * i * y[i];
|
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}
|
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return x;
|
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|
+
}
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//# sourceMappingURL=minError.js.map
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{"version":3,"file":"minError.js","sourceRoot":"","sources":["../../../src/operations/thresholds/minError.ts"],"names":[],"mappings":"AAAA;;;;;;;GAOG;AAEH;;;;;;GAMG;AACH,MAAM,CAAC,OAAO,UAAU,QAAQ,CAC9B,SAAsB,EACtB,KAAa;IAEb,IAAI,SAAS,CAAC;IACd,IAAI,KAAK,GAAG,CAAC,CAAC,CAAC;IACf,IAAI,EAAE,EAAE,EAAE,EAAE,CAAC,EAAE,CAAC,EAAE,MAAM,EAAE,IAAI,EAAE,EAAE,EAAE,EAAE,EAAE,EAAE,EAAE,MAAM,EAAE,IAAI,CAAC;IAEzD,mCAAmC;IACnC,IAAI,IAAI,GAAG,GAAG,CAAC;IACf,KAAK,IAAI,EAAE,GAAG,CAAC,EAAE,EAAE,GAAG,SAAS,CAAC,MAAM,EAAE,EAAE,EAAE,EAAE;QAC5C,IAAI,IAAI,EAAE,GAAG,SAAS,CAAC,EAAE,CAAC,CAAC;KAC5B;IAED,IAAI,IAAI,KAAK,CAAC;IAEd,SAAS,GAAG,IAAI,CAAC;IAEjB,OAAO,SAAS,KAAK,KAAK,EAAE;QAC1B,6BAA6B;QAC7B,MAAM,KAAK,GAAG,IAAI,CAAC,SAAS,EAAE,SAAS,CAAC,CAAC;QACzC,MAAM,KAAK,GAAG,IAAI,CAAC,SAAS,EAAE,SAAS,CAAC,MAAM,GAAG,CAAC,CAAC,CAAC;QACpD,MAAM,KAAK,GAAG,IAAI,CAAC,SAAS,EAAE,SAAS,CAAC,CAAC;QACzC,MAAM,KAAK,GAAG,IAAI,CAAC,SAAS,EAAE,SAAS,CAAC,MAAM,GAAG,CAAC,CAAC,CAAC;QACpD,MAAM,KAAK,GAAG,IAAI,CAAC,SAAS,EAAE,SAAS,CAAC,CAAC;QACzC,MAAM,KAAK,GAAG,IAAI,CAAC,SAAS,EAAE,SAAS,CAAC,MAAM,GAAG,CAAC,CAAC,CAAC;QAEpD,EAAE,GAAG,KAAK,GAAG,KAAK,CAAC;QACnB,EAAE,GAAG,CAAC,KAAK,GAAG,KAAK,CAAC,GAAG,CAAC,KAAK,GAAG,KAAK,CAAC,CAAC;QACvC,CAAC,GAAG,KAAK,GAAG,KAAK,CAAC;QAClB,CAAC,GAAG,CAAC,KAAK,GAAG,KAAK,CAAC,GAAG,KAAK,CAAC;QAC5B,MAAM,GAAG,KAAK,GAAG,KAAK,GAAG,EAAE,GAAG,EAAE,CAAC;QACjC,IAAI,GAAG,CAAC,KAAK,GAAG,KAAK,CAAC,GAAG,CAAC,KAAK,GAAG,KAAK,CAAC,GAAG,EAAE,GAAG,EAAE,CAAC;QAEnD,oDAAoD;QACpD,EAAE,GAAG,GAAG,GAAG,MAAM,GAAG,GAAG,GAAG,IAAI,CAAC;QAC/B,EAAE,GAAG,EAAE,GAAG,MAAM,GAAG,EAAE,GAAG,IAAI,CAAC;QAC7B,EAAE;YACA,CAAC,EAAE,GAAG,EAAE,CAAC,GAAG,MAAM;gBAClB,CAAC,EAAE,GAAG,EAAE,CAAC,GAAG,IAAI;gBAChB,IAAI,CAAC,KAAK,CAAC,CAAC,MAAM,GAAG,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,GAAG,CAAC,IAAI,GAAG,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC;QAEpD,yEAAyE;QACzE,MAAM,GAAG,EAAE,GAAG,EAAE,GAAG,EAAE,GAAG,EAAE,CAAC;QAC3B,IAAI,MAAM,GAAG,CAAC,EAAE;YACd,OAAO,SAAS,CAAC;SAClB;QAED,uFAAuF;QACvF,KAAK,GAAG,SAAS,CAAC;QAClB,IAAI,GAAG,CAAC,EAAE,GAAG,IAAI,CAAC,IAAI,CAAC,MAAM,CAAC,CAAC,GAAG,EAAE,CAAC;QAErC,IAAI,KAAK,CAAC,IAAI,CAAC,EAAE;YACf,SAAS,GAAG,KAAK,CAAC;SACnB;aAAM;YACL,SAAS,GAAG,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC;SAC9B;KACF;IACD,OAAO,SAAS,CAAC;AACnB,CAAC;AAED,WAAW;AAEX,SAAS,IAAI,CAAC,CAAc,EAAE,CAAS;IACrC,IAAI,CAAC,GAAG,CAAC,CAAC;IACV,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,IAAI,CAAC,EAAE,CAAC,EAAE,EAAE;QAC3B,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,CAAC;KACX;IACD,OAAO,CAAC,CAAC;AACX,CAAC;AAED,SAAS,IAAI,CAAC,CAAc,EAAE,CAAS;IACrC,IAAI,CAAC,GAAG,CAAC,CAAC;IACV,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,IAAI,CAAC,EAAE,CAAC,EAAE,EAAE;QAC3B,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC;KACf;IACD,OAAO,CAAC,CAAC;AACX,CAAC;AAED,SAAS,IAAI,CAAC,CAAc,EAAE,CAAS;IACrC,IAAI,CAAC,GAAG,CAAC,CAAC;IACV,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,IAAI,CAAC,EAAE,CAAC,EAAE,EAAE;QAC3B,CAAC,IAAI,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC;KACnB;IACD,OAAO,CAAC,CAAC;AACX,CAAC"}
|
|
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|
|
|
1
|
+
{"version":3,"file":"minimum.d.ts","sourceRoot":"","sources":["../../../src/operations/thresholds/minimum.ts"],"names":[],"mappings":"AAQA;;;;;GAKG;AACH,MAAM,CAAC,OAAO,UAAU,OAAO,CAAC,SAAS,EAAE,WAAW,GAAG,MAAM,CAiC9D"}
|
|
@@ -0,0 +1,75 @@
|
|
|
1
|
+
// see https://github.com/fiji/Auto_Threshold/blob/master/src/main/java/fiji/threshold/Auto_Threshold.java
|
|
2
|
+
// J. M. S. Prewitt and M. L. Mendelsohn, "The analysis of cell images," in
|
|
3
|
+
// Annals of the New York Academy of Sciences, vol. 128, pp. 1035-1053, 1966.
|
|
4
|
+
// ported to ImageJ plugin by G.Landini from Antti Niemisto's Matlab code (GPL)
|
|
5
|
+
// Original Matlab code Copyright (C) 2004 Antti Niemisto
|
|
6
|
+
// See http://www.cs.tut.fi/~ant/histthresh/ for an excellent slide presentation
|
|
7
|
+
// and the original Matlab code
|
|
8
|
+
/**
|
|
9
|
+
* Return a threshold for a histogram.
|
|
10
|
+
*
|
|
11
|
+
* @param histogram - Image histogram.
|
|
12
|
+
* @returns The threshold.
|
|
13
|
+
*/
|
|
14
|
+
export default function minimum(histogram) {
|
|
15
|
+
if (histogram.length < 2) {
|
|
16
|
+
// validate that the histogram has at least two color values
|
|
17
|
+
return 0;
|
|
18
|
+
}
|
|
19
|
+
let iterations = 0; // number of iterations of the smoothing process
|
|
20
|
+
let threshold = -1;
|
|
21
|
+
let max = -1; // maximum color value with a greater number of pixels to 0
|
|
22
|
+
let histogramCopy = new Array(histogram.length); // a copy of the histogram
|
|
23
|
+
for (let i = 0; i < histogram.length; i++) {
|
|
24
|
+
histogramCopy[i] = histogram[i];
|
|
25
|
+
if (histogram[i] > 0) {
|
|
26
|
+
max = i;
|
|
27
|
+
}
|
|
28
|
+
}
|
|
29
|
+
while (!bimodalTest(histogramCopy)) {
|
|
30
|
+
histogramCopy = smoothed(histogramCopy);
|
|
31
|
+
iterations++;
|
|
32
|
+
if (iterations > 10000) {
|
|
33
|
+
// if they occur more than 10000 iterations it returns -1
|
|
34
|
+
return threshold;
|
|
35
|
+
}
|
|
36
|
+
}
|
|
37
|
+
for (let i = 1; i < max; i++) {
|
|
38
|
+
if (histogramCopy[i - 1] > histogramCopy[i] &&
|
|
39
|
+
histogramCopy[i + 1] >= histogramCopy[i]) {
|
|
40
|
+
threshold = i;
|
|
41
|
+
break;
|
|
42
|
+
}
|
|
43
|
+
}
|
|
44
|
+
return threshold;
|
|
45
|
+
}
|
|
46
|
+
function smoothed(histogram) {
|
|
47
|
+
// Smooth with a 3 point running mean filter
|
|
48
|
+
const auHistogram = new Array(histogram.length); // a copy of the histograma for the smoothing process
|
|
49
|
+
for (let i = 1; i < histogram.length - 1; i++) {
|
|
50
|
+
auHistogram[i] = (histogram[i - 1] + histogram[i] + histogram[i + 1]) / 3;
|
|
51
|
+
}
|
|
52
|
+
auHistogram[0] = (histogram[0] + histogram[1]) / 3;
|
|
53
|
+
auHistogram[histogram.length - 1] =
|
|
54
|
+
(histogram[histogram.length - 2] + histogram[histogram.length - 1]) / 3;
|
|
55
|
+
return auHistogram;
|
|
56
|
+
}
|
|
57
|
+
function bimodalTest(histogram) {
|
|
58
|
+
// It is responsible for determining if a histogram is bimodal
|
|
59
|
+
const len = histogram.length;
|
|
60
|
+
let isBimodal = false;
|
|
61
|
+
let peaks = 0;
|
|
62
|
+
for (let k = 1; k < len - 1; k++) {
|
|
63
|
+
if (histogram[k - 1] < histogram[k] && histogram[k + 1] < histogram[k]) {
|
|
64
|
+
peaks++;
|
|
65
|
+
if (peaks > 2) {
|
|
66
|
+
return false;
|
|
67
|
+
}
|
|
68
|
+
}
|
|
69
|
+
}
|
|
70
|
+
if (peaks === 2) {
|
|
71
|
+
isBimodal = true;
|
|
72
|
+
}
|
|
73
|
+
return isBimodal;
|
|
74
|
+
}
|
|
75
|
+
//# sourceMappingURL=minimum.js.map
|
|
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|
|
|
1
|
+
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@@ -0,0 +1,9 @@
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1
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+
/**
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2
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+
* Return a threshold for a histogram.
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3
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+
*
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4
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+
* @param histogram - Image histogram.
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5
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+
* @param total - Number of pixels in the image.
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6
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+
* @returns The threshold.
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7
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+
*/
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8
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+
export default function moments(histogram: Uint32Array, total: number): number;
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9
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+
//# sourceMappingURL=moments.d.ts.map
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@@ -0,0 +1 @@
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1
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+
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