homegraph 0.9.10 → 1.1.1

package/dist/extraction/languages/objc.js

@@ -28,6 +28,47 @@ function extractObjcMethodName(node, source) {
     }
     return identifiers.map((id) => `${(0, tree_sitter_helpers_1.getNodeText)(id, source)}:`).join('');
 }
+/** Nullability / ARC qualifiers that sit where a return type's first type
+ *  identifier does (`(nonnull instancetype)`, `(nullable Bar *)`) — never the type. */
+const OBJC_TYPE_QUALIFIERS = new Set([
+    'nonnull', 'nullable', 'null_unspecified', 'null_resettable',
+    '_Nonnull', '_Nullable', '_Null_unspecified', '__nonnull', '__nullable',
+    'const', 'volatile', 'strong', 'weak', 'copy', 'assign', 'retain', 'oneway',
+    '__strong', '__weak', '__unsafe_unretained', '__autoreleasing', '__kindof',
+]);
+/** Collect the type identifiers under a `method_type`, in document order. */
+function collectTypeIdentifiers(node, source, out) {
+    if (node.type === 'type_identifier')
+        out.push((0, tree_sitter_helpers_1.getNodeText)(node, source).trim());
+    for (let i = 0; i < node.namedChildCount; i++) {
+        const child = node.namedChild(i);
+        if (child)
+            collectTypeIdentifiers(child, source, out);
+    }
+}
+/**
+ * Capture an ObjC method's declared return type as a bare class name, for the
+ * chained static-factory call mechanism (#750). `+ (Bar *)create` yields `Bar`;
+ * a nullability/ARC qualifier (`(nonnull instancetype)`, `(nullable Bar *)`) is
+ * skipped to reach the real type. `void` / `id` / `instancetype` / primitives
+ * yield undefined — for a class-message factory that means the receiver's type
+ * is the class itself (handled in resolution), so `[[X alloc] init]` and
+ * singleton chains still resolve.
+ */
+function extractObjcReturnType(node, source) {
+    if (node.type !== 'method_definition' && node.type !== 'method_declaration')
+        return undefined;
+    const methodType = node.namedChildren.find((c) => c.type === 'method_type');
+    if (!methodType)
+        return undefined;
+    const ids = [];
+    collectTypeIdentifiers(methodType, source, ids);
+    const name = ids.find((n) => !OBJC_TYPE_QUALIFIERS.has(n));
+    if (!name || !/^[A-Za-z_]\w*$/.test(name) || name === 'void' || name === 'id' || name === 'instancetype') {
+        return undefined;
+    }
+    return name;
+}
 function extractObjcPropertyName(node, source) {
     if (node.type !== 'property_declaration')
         return null;
@@ -68,6 +109,7 @@ exports.objcExtractor = {
     nameField: 'declarator',
     bodyField: 'body',
     paramsField: 'parameters',
+    getReturnType: extractObjcReturnType,
     resolveName: extractObjcMethodName,
     extractPropertyName: extractObjcPropertyName,
     resolveBody: (node, bodyField) => {

package/dist/extraction/languages/objc.js.map

@@ -1 +1 @@
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package/dist/extraction/languages/pascal.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"pascal.d.ts","sourceRoot":"","sources":["../../../src/extraction/languages/pascal.ts"],"names":[],"mappings":"AAEA,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,sBAAsB,CAAC;AAE9D,eAAO,MAAM,eAAe,EAAE,iBAyD7B,CAAC"}
+{"version":3,"file":"pascal.d.ts","sourceRoot":"","sources":["../../../src/extraction/languages/pascal.ts"],"names":[],"mappings":"AAEA,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,sBAAsB,CAAC;AAE9D,eAAO,MAAM,eAAe,EAAE,iBAmE7B,CAAC"}

package/dist/extraction/languages/pascal.js

@@ -17,6 +17,17 @@ exports.pascalExtractor = {
     bodyField: 'body',
     paramsField: 'args',
     returnField: 'type',
+    // Pascal/Delphi `function GetInstance: TBar` — the return type is a `typeref`
+    // child. Capture its bare class name for the chained static-factory call
+    // mechanism (#750). A procedure (no return) has no typeref → undefined.
+    getReturnType: (node, source) => {
+        const typeref = node.namedChildren.find((c) => c.type === 'typeref');
+        if (!typeref)
+            return undefined;
+        const id = typeref.namedChildren.find((c) => c.type === 'identifier') ?? typeref;
+        const name = (0, tree_sitter_helpers_1.getNodeText)(id, source).trim();
+        return /^[A-Za-z_]\w*$/.test(name) ? name : undefined;
+    },
     getSignature: (node, source) => {
         const args = (0, tree_sitter_helpers_1.getChildByField)(node, 'args');
         const returnType = node.namedChildren.find((c) => c.type === 'typeref');

package/dist/extraction/languages/pascal.js.map

@@ -1 +1 @@
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+{"version":3,"file":"pascal.js","sourceRoot":"","sources":["../../../src/extraction/languages/pascal.ts"],"names":[],"mappings":";;;AACA,gEAAsE;AAGzD,QAAA,eAAe,GAAsB;IAChD,aAAa,EAAE,CAAC,UAAU,CAAC;IAC3B,UAAU,EAAE,CAAC,WAAW,CAAC;IACzB,WAAW,EAAE,CAAC,UAAU,CAAC;IACzB,cAAc,EAAE,CAAC,UAAU,CAAC;IAC5B,WAAW,EAAE,EAAE;IACf,SAAS,EAAE,CAAC,UAAU,CAAC;IACvB,cAAc,EAAE,CAAC,UAAU,CAAC;IAC5B,WAAW,EAAE,CAAC,UAAU,CAAC;IACzB,SAAS,EAAE,CAAC,UAAU,CAAC;IACvB,aAAa,EAAE,CAAC,WAAW,EAAE,WAAW,CAAC;IACzC,SAAS,EAAE,MAAM;IACjB,SAAS,EAAE,MAAM;IACjB,WAAW,EAAE,MAAM;IACnB,WAAW,EAAE,MAAM;IACnB,8EAA8E;IAC9E,yEAAyE;IACzE,wEAAwE;IACxE,aAAa,EAAE,CAAC,IAAI,EAAE,MAAM,EAAE,EAAE;QAC9B,MAAM,OAAO,GAAG,IAAI,CAAC,aAAa,CAAC,IAAI,CAAC,CAAC,CAAa,EAAE,EAAE,CAAC,CAAC,CAAC,IAAI,KAAK,SAAS,CAAC,CAAC;QACjF,IAAI,CAAC,OAAO;YAAE,OAAO,SAAS,CAAC;QAC/B,MAAM,EAAE,GAAG,OAAO,CAAC,aAAa,CAAC,IAAI,CAAC,CAAC,CAAa,EAAE,EAAE,CAAC,CAAC,CAAC,IAAI,KAAK,YAAY,CAAC,IAAI,OAAO,CAAC;QAC7F,MAAM,IAAI,GAAG,IAAA,iCAAW,EAAC,EAAE,EAAE,MAAM,CAAC,CAAC,IAAI,EAAE,CAAC;QAC5C,OAAO,gBAAgB,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,SAAS,CAAC;IACxD,CAAC;IACD,YAAY,EAAE,CAAC,IAAI,EAAE,MAAM,EAAE,EAAE;QAC7B,MAAM,IAAI,GAAG,IAAA,qCAAe,EAAC,IAAI,EAAE,MAAM,CAAC,CAAC;QAC3C,MAAM,UAAU,GAAG,IAAI,CAAC,aAAa,CAAC,IAAI,CACxC,CAAC,CAAa,EAAE,EAAE,CAAC,CAAC,CAAC,IAAI,KAAK,SAAS,CACxC,CAAC;QACF,IAAI,CAAC,IAAI,IAAI,CAAC,UAAU;YAAE,OAAO,SAAS,CAAC;QAC3C,IAAI,GAAG,GAAG,EAAE,CAAC;QACb,IAAI,IAAI;YAAE,GAAG,GAAG,IAAA,iCAAW,EAAC,IAAI,EAAE,MAAM,CAAC,CAAC;QAC1C,IAAI,UAAU,EAAE,CAAC;YACf,GAAG,IAAI,IAAI,GAAG,IAAA,iCAAW,EAAC,UAAU,EAAE,MAAM,CAAC,CAAC;QAChD,CAAC;QACD,OAAO,GAAG,IAAI,SAAS,CAAC;IAC1B,CAAC;IACD,aAAa,EAAE,CAAC,IAAI,EAAE,EAAE;QACtB,IAAI,OAAO,GAAG,IAAI,CAAC,MAAM,CAAC;QAC1B,OAAO,OAAO,EAAE,CAAC;YACf,IAAI,OAAO,CAAC,IAAI,KAAK,aAAa,EAAE,CAAC;gBACnC,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,OAAO,CAAC,UAAU,EAAE,CAAC,EAAE,EAAE,CAAC;oBAC5C,MAAM,KAAK,GAAG,OAAO,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC;oBAC/B,IAAI,KAAK,EAAE,IAAI,KAAK,SAAS,IAAI,KAAK,EAAE,IAAI,KAAK,YAAY;wBAC3D,OAAO,QAAQ,CAAC;oBAClB,IAAI,KAAK,EAAE,IAAI,KAAK,UAAU;wBAAE,OAAO,SAAS,CAAC;oBACjD,IAAI,KAAK,EAAE,IAAI,KAAK,YAAY;wBAAE,OAAO,WAAW,CAAC;gBACvD,CAAC;YACH,CAAC;YACD,OAAO,GAAG,OAAO,CAAC,MAAM,CAAC;QAC3B,CAAC;QACD,OAAO,SAAS,CAAC;IACnB,CAAC;IACD,UAAU,EAAE,CAAC,KAAK,EAAE,OAAO,EAAE,EAAE;QAC7B,oEAAoE;QACpE,OAAO,KAAK,CAAC;IACf,CAAC;IACD,QAAQ,EAAE,CAAC,IAAI,EAAE,EAAE;QACjB,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,IAAI,CAAC,UAAU,EAAE,CAAC,EAAE,EAAE,CAAC;YACzC,IAAI,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,EAAE,IAAI,KAAK,QAAQ;gBAAE,OAAO,IAAI,CAAC;QACpD,CAAC;QACD,OAAO,KAAK,CAAC;IACf,CAAC;IACD,OAAO,EAAE,CAAC,IAAI,EAAE,EAAE;QAChB,OAAO,IAAI,CAAC,IAAI,KAAK,WAAW,CAAC;IACnC,CAAC;CACF,CAAC"}

package/dist/extraction/languages/php.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"php.d.ts","sourceRoot":"","sources":["../../../src/extraction/languages/php.ts"],"names":[],"mappings":"AAEA,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,sBAAsB,CAAC;AAE9D,eAAO,MAAM,YAAY,EAAE,iBAgH1B,CAAC"}
+{"version":3,"file":"php.d.ts","sourceRoot":"","sources":["../../../src/extraction/languages/php.ts"],"names":[],"mappings":"AAEA,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,sBAAsB,CAAC;AAiE9D,eAAO,MAAM,YAAY,EAAE,iBAyH1B,CAAC"}

package/dist/extraction/languages/php.js

@@ -2,6 +2,74 @@
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.phpExtractor = void 0;
 const tree_sitter_helpers_1 = require("../tree-sitter-helpers");
+// include / require (+ _once) expression node types. These carry the
+// file→file dependency in procedural PHP, where `include`/`require` — not
+// namespace `use` — is how a file pulls in another (issue #660).
+const PHP_INCLUDE_TYPES = new Set([
+    'include_expression',
+    'include_once_expression',
+    'require_expression',
+    'require_once_expression',
+]);
+/**
+ * Extract a static string-literal path from a PHP include/require expression.
+ *
+ * Returns null for dynamic forms (`include $var`, `require __DIR__ . '/x'`,
+ * interpolated strings) — they have no resolvable compile-time path, which
+ * matches the issue's "static string literals (the common case)" scope.
+ */
+function phpStaticIncludePath(node, source) {
+    // The path argument is the expression's first named child; the call-style
+    // form `require("x")` wraps it in a parenthesized_expression.
+    let arg = node.namedChild(0);
+    if (arg?.type === 'parenthesized_expression')
+        arg = arg.namedChild(0);
+    if (!arg || (arg.type !== 'string' && arg.type !== 'encapsed_string'))
+        return null;
+    // Pure literal only: any non-`string_content` child (interpolated variable,
+    // escape sequence, …) means the value isn't a static path.
+    const parts = arg.namedChildren;
+    if (parts.some((c) => c.type !== 'string_content'))
+        return null;
+    const content = parts.find((c) => c.type === 'string_content');
+    return content ? (0, tree_sitter_helpers_1.getNodeText)(content, source) : null;
+}
+/** PHP built-in return types that can't be a method receiver (so no class to chain on). */
+const PHP_NON_CLASS_RETURN = new Set([
+    'array', 'string', 'int', 'integer', 'float', 'double', 'bool', 'boolean',
+    'void', 'mixed', 'never', 'null', 'false', 'true', 'object', 'callable',
+    'iterable', 'resource',
+]);
+/**
+ * A method/function's declared return type, normalized to the class a chained
+ * `->method()` could be called on (issue #608). `self` / `static` / `$this` are
+ * kept as the marker `self` and resolved to the declaring class at resolution
+ * time; a concrete type returns its short name; primitives / unions / nullable
+ * non-class types return undefined.
+ */
+function extractPhpReturnType(node, source) {
+    let rt = (0, tree_sitter_helpers_1.getChildByField)(node, 'return_type');
+    if (!rt)
+        return undefined;
+    // Unwrap `?Type`. Union / intersection types are ambiguous — skip them.
+    if (rt.type === 'optional_type')
+        rt = rt.namedChild(0) ?? rt;
+    if (!rt || rt.type === 'primitive_type')
+        return undefined;
+    const nameNode = rt.type === 'named_type' ? (rt.namedChild(0) ?? rt) : rt;
+    const text = (0, tree_sitter_helpers_1.getNodeText)(nameNode, source).trim().replace(/^\\/, '');
+    if (!text)
+        return undefined;
+    const last = text.split('\\').pop() ?? text;
+    const lc = last.toLowerCase();
+    if (lc === 'self' || lc === 'static' || lc === 'this' || lc === '$this')
+        return 'self';
+    if (PHP_NON_CLASS_RETURN.has(lc))
+        return undefined;
+    if (!/^[A-Za-z_]\w*$/.test(last))
+        return undefined; // union/intersection/complex
+    return last;
+}
 exports.phpExtractor = {
     functionTypes: ['function_definition'],
     classTypes: ['class_declaration', 'trait_declaration'],
@@ -11,7 +79,7 @@ exports.phpExtractor = {
     enumTypes: ['enum_declaration'],
     enumMemberTypes: ['enum_case'],
     typeAliasTypes: [],
-    importTypes: ['namespace_use_declaration'],
+    importTypes: ['namespace_use_declaration', ...PHP_INCLUDE_TYPES],
     callTypes: ['function_call_expression', 'member_call_expression', 'scoped_call_expression'],
     variableTypes: ['const_declaration'],
     fieldTypes: ['property_declaration'],
@@ -19,6 +87,7 @@ exports.phpExtractor = {
     bodyField: 'body',
     paramsField: 'parameters',
     returnField: 'return_type',
+    getReturnType: extractPhpReturnType,
     classifyClassNode: (node) => {
         return node.type === 'trait_declaration' ? 'trait' : 'class';
     },
@@ -96,6 +165,13 @@ exports.phpExtractor = {
     },
     extractImport: (node, source) => {
         const importText = source.substring(node.startIndex, node.endIndex).trim();
+        // include / require (+ _once): emit a file→file dependency. The path is a
+        // static string literal in the common case; dynamic forms resolve to null
+        // and are skipped (no import node, no edge).
+        if (PHP_INCLUDE_TYPES.has(node.type)) {
+            const includePath = phpStaticIncludePath(node, source);
+            return includePath ? { moduleName: includePath, signature: importText } : null;
+        }
         // Check for grouped imports: use X\{A, B} - return null for core fallback
         const namespacePrefix = node.namedChildren.find((c) => c.type === 'namespace_name');
         const useGroup = node.namedChildren.find((c) => c.type === 'namespace_use_group');

package/dist/extraction/languages/php.js.map

@@ -1 +1 @@
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package/dist/extraction/languages/r.d.ts

@@ -0,0 +1,3 @@
+import type { LanguageExtractor } from '../tree-sitter-types';
+export declare const rExtractor: LanguageExtractor;
+//# sourceMappingURL=r.d.ts.map

package/dist/extraction/languages/r.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"r.d.ts","sourceRoot":"","sources":["../../../src/extraction/languages/r.ts"],"names":[],"mappings":"AAEA,OAAO,KAAK,EAAE,iBAAiB,EAAoB,MAAM,sBAAsB,CAAC;AAkKhF,eAAO,MAAM,UAAU,EAAE,iBAiJxB,CAAC"}

package/dist/extraction/languages/r.js

@@ -0,0 +1,314 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.rExtractor = void 0;
+const tree_sitter_helpers_1 = require("../tree-sitter-helpers");
+/**
+ * R language extractor (#828).
+ *
+ * R has no declaration syntax — everything is an expression, so every symbol
+ * the graph needs arrives through the visitNode hook rather than node-type
+ * lists:
+ *
+ *   - functions:   `name <- function(x) …` / `name = function(x) …` parse as
+ *                  binary_operator(lhs: identifier, rhs: function_definition).
+ *                  (`function(x) … -> name` right-assign of a function does
+ *                  not survive the grammar's precedence — the `->` binds inside
+ *                  the body — and the style is rare; deliberate gap.)
+ *   - variables:   top-level assignments only (locals would bloat the graph);
+ *                  ALL_CAPS / dotted-caps names extract as constants.
+ *   - imports:     `library(x)` / `require(x)` / `requireNamespace("x")` are
+ *                  ordinary calls; `source("file.R")` references another file.
+ *                  All are claimed so no noise call-edge to `library` remains
+ *                  (same pattern as Lua's `require`).
+ *   - classes:     S4 `setClass("Name", …)`, R5 `setRefClass("Name", …)`, and
+ *                  R6 `R6Class("Name", public = list(m = function() …))` are
+ *                  calls too; the class node is named by the first string
+ *                  argument and `name = function` entries in its list() args
+ *                  extract as methods inside the class scope.
+ *   - S4 generics: `setGeneric("name", …)` / `setMethod("name", "Class", fn)`
+ *                  extract as functions named by the first string argument.
+ *
+ * Calls themselves go through the generic call extraction (`call` nodes with a
+ * `function` field). Namespaced `pkg::fn(…)` keeps its qualified text;
+ * `obj$method(…)` extracts under its full text (resolution of `$`-dispatch is
+ * a known gap — R's S3 dispatch is runtime by design).
+ */
+const ASSIGN_LEFT = new Set(['<-', '<<-', '=']);
+const ASSIGN_RIGHT = new Set(['->', '->>']);
+const IMPORT_FNS = new Set(['library', 'require', 'requireNamespace', 'loadNamespace']);
+const CLASS_FNS = new Set(['setClass', 'setRefClass', 'R6Class', 'ggproto']);
+const GENERIC_FNS = new Set(['setGeneric', 'setMethod']);
+/** ALL_CAPS or DOTTED.CAPS top-level assignment → constant. */
+const CONSTANT_NAME = /^[A-Z][A-Z0-9._]*$/;
+/** The call's callee name when it is a bare identifier or `pkg::fn` (→ `fn`). */
+function calleeName(call, source) {
+    const fn = (0, tree_sitter_helpers_1.getChildByField)(call, 'function');
+    if (!fn)
+        return null;
+    if (fn.type === 'identifier')
+        return (0, tree_sitter_helpers_1.getNodeText)(fn, source);
+    if (fn.type === 'namespace_operator') {
+        const rhs = (0, tree_sitter_helpers_1.getChildByField)(fn, 'rhs');
+        if (rhs)
+            return (0, tree_sitter_helpers_1.getNodeText)(rhs, source);
+    }
+    return null;
+}
+/** First positional argument's value node of a call. */
+function firstArgValue(call) {
+    const args = (0, tree_sitter_helpers_1.getChildByField)(call, 'arguments');
+    if (!args)
+        return null;
+    for (let i = 0; i < args.namedChildCount; i++) {
+        const arg = args.namedChild(i);
+        if (arg?.type !== 'argument')
+            continue;
+        return (0, tree_sitter_helpers_1.getChildByField)(arg, 'value');
+    }
+    return null;
+}
+/** Text of a string node's content, or an identifier's text. */
+function literalOrIdentifier(node, source) {
+    if (!node)
+        return null;
+    if (node.type === 'identifier')
+        return (0, tree_sitter_helpers_1.getNodeText)(node, source);
+    if (node.type === 'string') {
+        for (let i = 0; i < node.namedChildCount; i++) {
+            const c = node.namedChild(i);
+            if (c?.type === 'string_content')
+                return (0, tree_sitter_helpers_1.getNodeText)(c, source);
+        }
+        return ''; // empty string literal
+    }
+    return null;
+}
+/** Emit one `name = function(…)` argument entry as a method in the current scope. */
+function emitMethodArg(entry, ctx) {
+    const entryName = (0, tree_sitter_helpers_1.getChildByField)(entry, 'name');
+    const entryValue = (0, tree_sitter_helpers_1.getChildByField)(entry, 'value');
+    if (!entryName || entryValue?.type !== 'function_definition')
+        return;
+    const params = (0, tree_sitter_helpers_1.getChildByField)(entryValue, 'parameters');
+    const method = ctx.createNode('method', (0, tree_sitter_helpers_1.getNodeText)(entryName, ctx.source), entry, {
+        signature: params ? (0, tree_sitter_helpers_1.getNodeText)(params, ctx.source) : undefined,
+    });
+    const body = (0, tree_sitter_helpers_1.getChildByField)(entryValue, 'body');
+    if (method && body) {
+        ctx.pushScope(method.id);
+        ctx.visitNode(body); // hook-aware walk — see the function-assignment note below
+        ctx.popScope();
+    }
+}
+/**
+ * Extract a class call's methods. Two shapes:
+ *  - inside list() arguments — R5 `methods = list(deposit = function(x) …)`,
+ *    R6 `public = list(…)` / `private = list(…)`;
+ *  - DIRECT named function arguments — ggproto's style:
+ *    `ggproto("GeomPoint", Geom, draw_panel = function(…) …)`.
+ * Also records the parent class as an `extends` reference: ggproto's second
+ * positional identifier argument, R6's `inherit = Parent`, S4's
+ * `contains = "Parent"`.
+ */
+function extractClassMembers(classCall, classId, ctx) {
+    const args = (0, tree_sitter_helpers_1.getChildByField)(classCall, 'arguments');
+    if (!args)
+        return;
+    let positional = 0;
+    for (let i = 0; i < args.namedChildCount; i++) {
+        const arg = args.namedChild(i);
+        if (arg?.type !== 'argument')
+            continue;
+        const argName = (0, tree_sitter_helpers_1.getChildByField)(arg, 'name');
+        const value = (0, tree_sitter_helpers_1.getChildByField)(arg, 'value');
+        if (!argName) {
+            positional++;
+            // ggproto("Name", Parent, …) — the 2nd positional identifier is the parent.
+            if (positional === 2 && value?.type === 'identifier') {
+                ctx.addUnresolvedReference({
+                    fromNodeId: classId,
+                    referenceName: (0, tree_sitter_helpers_1.getNodeText)(value, ctx.source),
+                    referenceKind: 'extends',
+                    line: value.startPosition.row + 1,
+                    column: value.startPosition.column,
+                });
+            }
+            continue;
+        }
+        const argNameText = (0, tree_sitter_helpers_1.getNodeText)(argName, ctx.source);
+        // R6 `inherit = Parent` / S4 `contains = "Parent"`.
+        if ((argNameText === 'inherit' || argNameText === 'contains') && value) {
+            const parent = literalOrIdentifier(value, ctx.source);
+            if (parent) {
+                ctx.addUnresolvedReference({
+                    fromNodeId: classId,
+                    referenceName: parent,
+                    referenceKind: 'extends',
+                    line: value.startPosition.row + 1,
+                    column: value.startPosition.column,
+                });
+            }
+            continue;
+        }
+        // Direct named function argument (ggproto methods).
+        if (value?.type === 'function_definition') {
+            emitMethodArg(arg, ctx);
+            continue;
+        }
+        // list(…) of named function arguments (R5/R6 methods).
+        if (value?.type === 'call' && calleeName(value, ctx.source) === 'list') {
+            const listArgs = (0, tree_sitter_helpers_1.getChildByField)(value, 'arguments');
+            if (!listArgs)
+                continue;
+            for (let j = 0; j < listArgs.namedChildCount; j++) {
+                const entry = listArgs.namedChild(j);
+                if (entry?.type === 'argument')
+                    emitMethodArg(entry, ctx);
+            }
+        }
+    }
+}
+exports.rExtractor = {
+    functionTypes: [], // named functions are assignments — handled in visitNode
+    classTypes: [],
+    methodTypes: [],
+    interfaceTypes: [],
+    structTypes: [],
+    enumTypes: [],
+    typeAliasTypes: [],
+    importTypes: [], // library()/require()/source() are calls — handled in visitNode
+    callTypes: ['call'],
+    variableTypes: [], // top-level assignments — handled in visitNode
+    nameField: 'name',
+    bodyField: 'body',
+    paramsField: 'parameters',
+    visitNode: (node, ctx) => {
+        const source = ctx.source;
+        if (node.type === 'call') {
+            const fname = calleeName(node, source);
+            if (!fname)
+                return false;
+            // library(dplyr) / require(stats) / requireNamespace("jsonlite") —
+            // and source("helpers.R"), which references another file in the project.
+            if (IMPORT_FNS.has(fname) || fname === 'source') {
+                const mod = literalOrIdentifier(firstArgValue(node), source);
+                if (!mod)
+                    return true; // dynamic argument — nothing to record, still not a call edge
+                const imp = ctx.createNode('import', mod, node, {
+                    signature: (0, tree_sitter_helpers_1.getNodeText)(node, source).trim().slice(0, 100),
+                });
+                if (imp && ctx.nodeStack.length > 0) {
+                    const parentId = ctx.nodeStack[ctx.nodeStack.length - 1];
+                    if (parentId) {
+                        ctx.addUnresolvedReference({
+                            fromNodeId: parentId,
+                            referenceName: mod,
+                            referenceKind: 'imports',
+                            line: node.startPosition.row + 1,
+                            column: node.startPosition.column,
+                        });
+                    }
+                }
+                return true;
+            }
+            // setClass("Patient", …) / setRefClass("Account", …) / R6Class("Stack", …)
+            if (CLASS_FNS.has(fname)) {
+                const name = literalOrIdentifier(firstArgValue(node), source);
+                if (!name)
+                    return false;
+                const cls = ctx.createNode('class', name, node, {});
+                if (cls) {
+                    ctx.pushScope(cls.id);
+                    extractClassMembers(node, cls.id, ctx);
+                    ctx.popScope();
+                }
+                return true;
+            }
+            // setGeneric("describe", …) / setMethod("describe", "Patient", function(obj) …)
+            if (GENERIC_FNS.has(fname)) {
+                const name = literalOrIdentifier(firstArgValue(node), source);
+                if (!name)
+                    return false;
+                // The implementing function_definition, when present (setMethod always,
+                // setGeneric usually via the def= argument).
+                const args = (0, tree_sitter_helpers_1.getChildByField)(node, 'arguments');
+                let impl = null;
+                if (args) {
+                    for (let i = 0; i < args.namedChildCount; i++) {
+                        const v = args.namedChild(i)?.type === 'argument'
+                            ? (0, tree_sitter_helpers_1.getChildByField)(args.namedChild(i), 'value') : null;
+                        if (v?.type === 'function_definition') {
+                            impl = v;
+                            break;
+                        }
+                    }
+                }
+                const params = impl ? (0, tree_sitter_helpers_1.getChildByField)(impl, 'parameters') : null;
+                const fn = ctx.createNode('function', name, node, {
+                    signature: params ? (0, tree_sitter_helpers_1.getNodeText)(params, source) : undefined,
+                });
+                const body = impl ? (0, tree_sitter_helpers_1.getChildByField)(impl, 'body') : null;
+                if (fn && body) {
+                    ctx.pushScope(fn.id);
+                    ctx.visitNode(body); // hook-aware walk — see the function-assignment note below
+                    ctx.popScope();
+                }
+                return true;
+            }
+            return false; // ordinary call — generic extraction records the edge
+        }
+        if (node.type === 'binary_operator') {
+            const op = node.childForFieldName('operator')?.text;
+            if (!op)
+                return false;
+            const lhs = (0, tree_sitter_helpers_1.getChildByField)(node, 'lhs');
+            const rhs = (0, tree_sitter_helpers_1.getChildByField)(node, 'rhs');
+            // name <- function(…) / name = function(…)   (any scope — nested
+            // functions extract inside their enclosing function's scope). The body
+            // is walked through ctx.visitNode, NOT ctx.visitFunctionBody: the body
+            // walker doesn't consult this hook, and in R every nested definition is
+            // an assignment expression that only this hook can recognize. visitNode
+            // dispatches calls and the hook alike, with the function on the scope
+            // stack so attribution is right.
+            if (ASSIGN_LEFT.has(op) && lhs?.type === 'identifier' && rhs?.type === 'function_definition') {
+                const params = (0, tree_sitter_helpers_1.getChildByField)(rhs, 'parameters');
+                const fn = ctx.createNode('function', (0, tree_sitter_helpers_1.getNodeText)(lhs, source), node, {
+                    signature: params ? (0, tree_sitter_helpers_1.getNodeText)(params, source) : undefined,
+                });
+                const body = (0, tree_sitter_helpers_1.getChildByField)(rhs, 'body');
+                if (fn && body) {
+                    ctx.pushScope(fn.id);
+                    ctx.visitNode(body);
+                    ctx.popScope();
+                }
+                return true;
+            }
+            // Top-level value assignments → variable/constant. Locals are skipped
+            // deliberately (graph bloat); the initializer is still visited so its
+            // calls and nested definitions extract.
+            const topLevel = node.parent?.type === 'program';
+            if (topLevel && ASSIGN_LEFT.has(op) && lhs?.type === 'identifier' && rhs) {
+                // `Account <- setRefClass("Account", …)` is the CLASS definition idiom
+                // (same for R6Class / setClass / setGeneric) — the call hook makes the
+                // class/function node; a twin variable node would just be noise.
+                const rhsCallee = rhs.type === 'call' ? calleeName(rhs, source) : null;
+                if (!rhsCallee || (!CLASS_FNS.has(rhsCallee) && !GENERIC_FNS.has(rhsCallee))) {
+                    const name = (0, tree_sitter_helpers_1.getNodeText)(lhs, source);
+                    ctx.createNode(CONSTANT_NAME.test(name) ? 'constant' : 'variable', name, node, {});
+                }
+                ctx.visitNode(rhs);
+                return true;
+            }
+            // value -> name / value ->> name (right assign)
+            if (topLevel && ASSIGN_RIGHT.has(op) && rhs?.type === 'identifier' && lhs) {
+                const name = (0, tree_sitter_helpers_1.getNodeText)(rhs, source);
+                ctx.createNode(CONSTANT_NAME.test(name) ? 'constant' : 'variable', name, node, {});
+                ctx.visitNode(lhs);
+                return true;
+            }
+            return false;
+        }
+        return false;
+    },
+};
+//# sourceMappingURL=r.js.map

package/dist/extraction/languages/r.js.map

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package/dist/extraction/languages/rust.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"rust.d.ts","sourceRoot":"","sources":["../../../src/extraction/languages/rust.ts"],"names":[],"mappings":"AAEA,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,sBAAsB,CAAC;AAgC9D,eAAO,MAAM,aAAa,EAAE,iBAoH3B,CAAC"}