higlass 1.12.3 → 1.13.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (90) hide show
  1. package/README.md +3 -3
  2. package/app/globals.d.ts +11 -0
  3. package/app/missing-types.d.ts +21 -0
  4. package/app/scripts/CenterTrack.jsx +0 -1
  5. package/app/scripts/DraggableDiv.jsx +0 -1
  6. package/app/scripts/GenomePositionSearchBox.jsx +0 -1
  7. package/app/scripts/SearchField.js +1 -1
  8. package/app/scripts/TrackRenderer.jsx +405 -89
  9. package/app/scripts/VerticalTiledPlot.jsx +0 -1
  10. package/app/scripts/configs/default-tracks-for-datatype.js +3 -2
  11. package/app/scripts/configs/primitives.js +3 -2
  12. package/app/scripts/configs/tracks-info-by-type.js +4 -1
  13. package/app/scripts/configs/tracks-info.js +25 -1
  14. package/app/scripts/plugins/available-for-plugins.js +14 -6
  15. package/app/scripts/types.ts +79 -0
  16. package/app/scripts/utils/abs-to-chr.js +16 -1
  17. package/app/scripts/utils/accessor-transposition.js +5 -4
  18. package/app/scripts/utils/add-arrays.js +9 -7
  19. package/app/scripts/utils/add-class.js +4 -2
  20. package/app/scripts/utils/add-event-listener-once.js +9 -3
  21. package/app/scripts/utils/background-task-scheduler.js +58 -2
  22. package/app/scripts/utils/base64-to-canvas.js +12 -5
  23. package/app/scripts/utils/chr-to-abs.js +10 -0
  24. package/app/scripts/utils/chrom-info-bisector.js +4 -1
  25. package/app/scripts/utils/clone-event.js +11 -4
  26. package/app/scripts/utils/color-to-hex.js +8 -0
  27. package/app/scripts/utils/color-to-rgba.js +8 -0
  28. package/app/scripts/utils/data-to-genomic-loci.js +13 -1
  29. package/app/scripts/utils/debounce.js +16 -11
  30. package/app/scripts/utils/dec-to-hex-str.js +7 -0
  31. package/app/scripts/utils/dict-from-tuples.js +11 -3
  32. package/app/scripts/utils/dict-items.js +15 -0
  33. package/app/scripts/utils/dict-keys.js +11 -1
  34. package/app/scripts/utils/dict-values.js +7 -0
  35. package/app/scripts/utils/download.js +14 -11
  36. package/app/scripts/utils/flatten.js +5 -2
  37. package/app/scripts/utils/for-each.js +7 -5
  38. package/app/scripts/utils/forward-event.js +3 -2
  39. package/app/scripts/utils/genome-loci-to-pixels.js +8 -0
  40. package/app/scripts/utils/genomic-range-to-chromosome-chunks.js +13 -6
  41. package/app/scripts/utils/get-aggregation-function.js +10 -2
  42. package/app/scripts/utils/get-element-dim.js +6 -0
  43. package/app/scripts/utils/gradient.js +14 -0
  44. package/app/scripts/utils/has-class.js +6 -4
  45. package/app/scripts/utils/hex-string-to-int.js +11 -4
  46. package/app/scripts/utils/index.js +14 -0
  47. package/app/scripts/utils/into-the-void.js +2 -1
  48. package/app/scripts/utils/is-track-or-child-track.js +6 -0
  49. package/app/scripts/utils/is-track-range-selectable.js +10 -1
  50. package/app/scripts/utils/is-within.js +9 -7
  51. package/app/scripts/utils/lat-to-y.js +6 -3
  52. package/app/scripts/utils/lng-to-x.js +4 -3
  53. package/app/scripts/utils/map.js +5 -2
  54. package/app/scripts/utils/max-non-zero.js +6 -0
  55. package/app/scripts/utils/max.js +4 -3
  56. package/app/scripts/utils/min-non-zero.js +6 -0
  57. package/app/scripts/utils/min.js +4 -3
  58. package/app/scripts/utils/mod.js +4 -3
  59. package/app/scripts/utils/numericify-version.js +5 -0
  60. package/app/scripts/utils/obj-vals.js +3 -2
  61. package/app/scripts/utils/or.js +4 -3
  62. package/app/scripts/utils/parse-chromsizes-rows.js +26 -5
  63. package/app/scripts/utils/q.js +3 -2
  64. package/app/scripts/utils/rad-to-deg.js +3 -2
  65. package/app/scripts/utils/reduce.js +2 -2
  66. package/app/scripts/utils/rel-to-abs-chrom-pos.js +10 -0
  67. package/app/scripts/utils/remove-class.js +3 -2
  68. package/app/scripts/utils/reset-d3-brush-style.js +7 -2
  69. package/app/scripts/utils/rgb-to-hex.js +9 -0
  70. package/app/scripts/utils/scales-center-and-k.js +5 -3
  71. package/app/scripts/utils/scales-to-genome-loci.js +10 -0
  72. package/app/scripts/utils/selected-items-to-cum-weights.js +12 -4
  73. package/app/scripts/utils/selected-items-to-size.js +5 -2
  74. package/app/scripts/utils/show-mouse-position.js +62 -19
  75. package/app/scripts/utils/some.js +6 -4
  76. package/app/scripts/utils/sum.js +4 -3
  77. package/app/scripts/utils/throttle-and-debounce.js +15 -6
  78. package/app/scripts/utils/tile-to-canvas.js +8 -4
  79. package/app/scripts/utils/timeout.js +2 -0
  80. package/app/scripts/utils/to-void.js +2 -0
  81. package/app/scripts/utils/total-track-pixel-height.js +11 -12
  82. package/app/scripts/utils/trim-trailing-slash.js +3 -2
  83. package/app/scripts/utils/type-guards.js +17 -0
  84. package/app/scripts/utils/value-to-color.js +7 -6
  85. package/app/scripts/utils/visit-positioned-tracks.js +16 -11
  86. package/app/scripts/utils/visit-tracks.js +12 -13
  87. package/dist/hglib.css +54 -54
  88. package/dist/hglib.js +62191 -62096
  89. package/dist/hglib.min.js +127 -127
  90. package/package.json +16 -5
package/dist/hglib.css CHANGED
@@ -550,22 +550,6 @@ path._domain_1y7td_60 {
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  cursor: col-resize;
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  }._horizontal-tiled-plot_1bqkg_1 {
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  position: relative;
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- }._track-renderer_11dwb_1 {
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- position: relative;
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- }
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-
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- ._track-renderer-element_11dwb_5,
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- ._track-renderer-events_11dwb_6 {
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- position: absolute;
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- top: 0;
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- right: 0;
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- bottom: 0;
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- left: 0;
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- z-index: -1;
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- }
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-
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- ._track-renderer-events_11dwb_6 {
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- z-index: 1;
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  }._button_1wnjn_1 {
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  display: flex;
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  align-items: center;
@@ -740,6 +724,59 @@ path._domain_1y7td_60 {
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  left: 10px;
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  right: 10px;
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  bottom: 10px;
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+ }/*
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+ @import url('https://fonts.googleapis.com/css?family=Roboto:400,700');
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+ */
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+
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+ table.table-track-options {
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+ border-collapse: collapse;
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+ margin-left: auto;
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+ margin-right: auto;
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+ }
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+
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+ td.td-track-options {
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+ border: 1px solid #fff;
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+ outline: none;
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+ padding: 3px;
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+ position: relative;
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+ font-family: 'Roboto', sans-serif;
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+ font-size: 14px;
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+ color: #666;
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+ }
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+
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+ .cell-label {
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+ position: absolute;
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+ left: 0px;
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+ top: 0px;
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+ margin-left: 5px;
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+ color: #777;
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+ }
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+
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+ .modal-dialog {
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+ position: relative;
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+ display: table;
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+ overflow-y: auto;
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+ overflow-x: auto;
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+ width: auto;
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+ min-width: 300px;
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+ margin: auto;
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+ }
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+ ._track-renderer_11dwb_1 {
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+ position: relative;
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+ }
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+
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+ ._track-renderer-element_11dwb_5,
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+ ._track-renderer-events_11dwb_6 {
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+ position: absolute;
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+ top: 0;
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+ right: 0;
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+ bottom: 0;
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+ left: 0;
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+ z-index: -1;
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+ }
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+
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+ ._track-renderer-events_11dwb_6 {
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+ z-index: 1;
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  }.tileset-finder-label {
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  font-weight: 700;
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  }
@@ -1071,44 +1108,7 @@ path._domain_1y7td_60 {
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  width: 600px;
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  min-width: 300px;
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  margin: auto;
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- }/*
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- @import url('https://fonts.googleapis.com/css?family=Roboto:400,700');
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- */
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-
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- table.table-track-options {
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- border-collapse: collapse;
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- margin-left: auto;
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- margin-right: auto;
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- }
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-
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- td.td-track-options {
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- border: 1px solid #fff;
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- outline: none;
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- padding: 3px;
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- position: relative;
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- font-family: 'Roboto', sans-serif;
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- font-size: 14px;
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- color: #666;
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- }
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-
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- .cell-label {
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- position: absolute;
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- left: 0px;
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- top: 0px;
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- margin-left: 5px;
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- color: #777;
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- }
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-
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- .modal-dialog {
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- position: relative;
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- display: table;
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- overflow-y: auto;
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- overflow-x: auto;
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- width: auto;
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- min-width: 300px;
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- margin: auto;
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- }
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- ._vertical-tiled-plot_f3ho8_1 {
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+ }._vertical-tiled-plot_f3ho8_1 {
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  position: relative;
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  }._genome-position-search_1l2sx_1,
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  ._genome-position-search-focus_1l2sx_2 {