helixlife-expert-cli 0.1.0

package/cli/dist/modules/fund/clinical/sse-utils.d.ts

@@ -0,0 +1,22 @@
+import { type OutputFormat } from "../../../core/index.js";
+export interface StreamClinicalWorkflowOptions {
+    path: string;
+    body: unknown;
+    format?: OutputFormat;
+    startLabel: string;
+    progressLabel: string;
+    finishLabel: string;
+    failureMessage: string;
+    emptyMessage: string;
+    /** 为 true 时：有 outputs 即可成功，不强制要求 text */
+    allowEmptyText?: boolean;
+}
+export interface StreamClinicalWorkflowResult {
+    text: string;
+    elapsedTime?: number;
+    workflowRunId?: string;
+    outputs?: Record<string, unknown>;
+}
+/** 通用 SSE workflow 流式请求 */
+export declare function streamClinicalWorkflow(options: StreamClinicalWorkflowOptions): Promise<StreamClinicalWorkflowResult>;
+//# sourceMappingURL=sse-utils.d.ts.map

package/cli/dist/modules/fund/clinical/sse-utils.d.ts.map

@@ -0,0 +1 @@
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package/cli/dist/modules/fund/clinical/sse-utils.js

@@ -0,0 +1,80 @@
+// 临床工作台 SSE workflow 流式请求：增量打印、进度心跳与结束态收集
+// 仿 sci/sse-utils.ts 的 streamSseWorkflow，允许仅返回结构化 outputs（预检无正文 text）
+import { ApiClient, helixlifeError, helixlifeErrorCode, createStderrProgress, extractSseText, assertWorkflowSucceeded, pickWorkflowOutputText, } from "../../../core/index.js";
+/** 通用 SSE workflow 流式请求 */
+export async function streamClinicalWorkflow(options) {
+    const client = new ApiClient();
+    const chunks = [];
+    let receivedLength = 0;
+    let overrideText;
+    let succeeded = false;
+    let elapsedTime;
+    let workflowRunId;
+    let finishedOutputs;
+    let streamedAny = false;
+    const streamToStdout = options.format !== "json";
+    if (streamToStdout) {
+        console.log(`${options.startLabel}\n`);
+    }
+    else {
+        process.stderr.write(`\n${options.startLabel}\n`);
+    }
+    const progress = createStderrProgress(!streamToStdout);
+    progress.start(options.progressLabel);
+    try {
+        await client.requestSse(options.path, { method: "POST", body: options.body }, (payload) => {
+            assertWorkflowSucceeded(payload, options.failureMessage, ["workflow_finished"]);
+            const chunk = extractSseText(payload, { nested: true });
+            if (chunk) {
+                chunks.push(chunk);
+                receivedLength += chunk.length;
+                progress.update(receivedLength);
+                if (streamToStdout) {
+                    process.stdout.write(chunk);
+                    streamedAny = true;
+                }
+            }
+            if (payload.event === "workflow_finished") {
+                const data = payload.data;
+                if (typeof data === "object" && data !== null) {
+                    const record = data;
+                    if (record.status === "succeeded") {
+                        succeeded = true;
+                    }
+                    if (typeof record.elapsed_time === "number") {
+                        elapsedTime = record.elapsed_time;
+                    }
+                    const outputs = record.outputs;
+                    if (typeof outputs === "object" && outputs !== null) {
+                        finishedOutputs = outputs;
+                        const finishedText = pickWorkflowOutputText(finishedOutputs);
+                        if (finishedText) {
+                            overrideText = finishedText;
+                            if (streamToStdout && !streamedAny) {
+                                process.stdout.write(`${finishedText}\n`);
+                                streamedAny = true;
+                            }
+                        }
+                    }
+                }
+                if (typeof payload.workflow_run_id === "string") {
+                    workflowRunId = payload.workflow_run_id;
+                }
+            }
+        });
+    }
+    catch (error) {
+        progress.dispose();
+        throw error;
+    }
+    progress.finish(options.finishLabel);
+    const text = overrideText ?? chunks.join("");
+    if (!text && !options.allowEmptyText) {
+        throw new helixlifeError(helixlifeErrorCode.INVALID_RESPONSE, `${options.emptyMessage}（后端可能未返回有效输出内容，或接口响应超时）`);
+    }
+    if (!succeeded) {
+        throw new helixlifeError(helixlifeErrorCode.REQUEST_FAILED, options.failureMessage);
+    }
+    return { text, elapsedTime, workflowRunId, outputs: finishedOutputs };
+}
+//# sourceMappingURL=sse-utils.js.map

package/cli/dist/modules/fund/clinical/sse-utils.js.map

@@ -0,0 +1 @@
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package/cli/dist/modules/fund/constants.d.ts

@@ -0,0 +1,3 @@
+export declare const FUND_EXPERT_ID = "fund";
+export declare const FUND_EXPERT_TITLE = "\u57FA\u91D1\u5199\u4F5C\u4E13\u5BB6";
+//# sourceMappingURL=constants.d.ts.map

package/cli/dist/modules/fund/constants.d.ts.map

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package/cli/dist/modules/fund/constants.js

@@ -0,0 +1,3 @@
+export const FUND_EXPERT_ID = "fund";
+export const FUND_EXPERT_TITLE = "基金写作专家";
+//# sourceMappingURL=constants.js.map

package/cli/dist/modules/fund/constants.js.map

@@ -0,0 +1 @@
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package/cli/dist/modules/fund/index.d.ts

@@ -0,0 +1,3 @@
+import type { Command } from "commander";
+export declare function registerFundCommands(program: Command): void;
+//# sourceMappingURL=index.d.ts.map

package/cli/dist/modules/fund/index.d.ts.map

@@ -0,0 +1 @@
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package/cli/dist/modules/fund/index.js

@@ -0,0 +1,28 @@
+import { emitJson } from "../../core/index.js";
+import { FUND_EXPERT_ID, FUND_EXPERT_TITLE } from "./constants.js";
+import { registerNsfcCommands } from "./nsfc/index.js";
+import { registerClinicalCommands } from "./clinical/index.js";
+// 注册基金写作专家命名空间：helixlife-expert fund <nsfc|clinical> …
+export function registerFundCommands(program) {
+    const fund = program.command(FUND_EXPERT_ID).description(FUND_EXPERT_TITLE);
+    fund
+        .command("info")
+        .description("查看基金写作专家模块状态")
+        .action(() => {
+        emitJson({
+            ok: true,
+            expert: FUND_EXPERT_ID,
+            title: FUND_EXPERT_TITLE,
+            implemented: true,
+        });
+    });
+    const nsfc = fund
+        .command("nsfc")
+        .description("国自然基金申请书（四步：假说 → 确认 → 提纲 → 全文）");
+    registerNsfcCommands(nsfc);
+    const clinical = fund
+        .command("clinical")
+        .description("临床申请书（三步：选题评估 → 四要素 → 全文）");
+    registerClinicalCommands(clinical);
+}
+//# sourceMappingURL=index.js.map

package/cli/dist/modules/fund/index.js.map

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package/cli/dist/modules/fund/nsfc/apps.d.ts

@@ -0,0 +1,54 @@
+export interface CreateNsfcOrderBody {
+    index: number;
+    count: number;
+    query?: string;
+    inputs?: Record<string, unknown>;
+    files?: string[];
+    parent_order_id: string | null;
+}
+export interface CreateNsfcOrderResult {
+    success?: boolean;
+    data?: {
+        msg?: string;
+        data?: {
+            order_id?: string;
+        };
+    };
+    message?: string;
+    /** true：orders 接口不可用时的本地会话 ID（对齐前端假说流可不建单） */
+    synthetic?: boolean;
+    [key: string]: unknown;
+}
+export interface NsfcExecuteBody {
+    response_mode: "streaming";
+    query: string;
+    inputs: Record<string, unknown>;
+    app_id: string;
+    app_name: string;
+    app_mode: "workflow";
+    app_type: 1;
+    index: number;
+    order_id: string;
+    end: boolean;
+    count: number;
+    parent_order_id: string | null;
+}
+export declare function buildNsfcExecuteBody(params: {
+    query?: string;
+    inputs: Record<string, unknown>;
+    appId: string;
+    appName: string;
+    index?: number;
+    orderId: string;
+    end?: boolean;
+    count?: number;
+    parentOrderId?: string | null;
+}): NsfcExecuteBody;
+/**
+ * 创建基金工作台订单。
+ * 当前部分环境未部署 nsfc-v2/apps/orders（404）；假说类工作流前端本就不建单，
+ * 此时回退为本地 UUID，仍可走 apps/execute。
+ */
+export declare function createNsfcOrder(body: CreateNsfcOrderBody): Promise<CreateNsfcOrderResult>;
+export declare function extractNsfcOrderId(order: CreateNsfcOrderResult): string;
+//# sourceMappingURL=apps.d.ts.map

package/cli/dist/modules/fund/nsfc/apps.d.ts.map

@@ -0,0 +1 @@
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package/cli/dist/modules/fund/nsfc/apps.js

@@ -0,0 +1,76 @@
+// NSFC-v2 /apps/*：订单创建与 SSE execute 请求体
+import { randomUUID } from "node:crypto";
+import { ApiClient, helixlifeError, helixlifeErrorCode, } from "../../../core/index.js";
+import { NSFC_ORDER_API_PATH } from "./constants.js";
+export function buildNsfcExecuteBody(params) {
+    return {
+        response_mode: "streaming",
+        query: params.query ?? "",
+        inputs: params.inputs,
+        app_id: params.appId,
+        app_name: params.appName,
+        app_mode: "workflow",
+        app_type: 1,
+        index: params.index ?? 0,
+        order_id: params.orderId,
+        end: params.end ?? false,
+        count: params.count ?? 1,
+        parent_order_id: params.parentOrderId ?? null,
+    };
+}
+function isOrdersUnavailableError(error) {
+    if (!(error instanceof helixlifeError))
+        return false;
+    if (error.code !== helixlifeErrorCode.REQUEST_FAILED)
+        return false;
+    return (/\(404\)/.test(error.message) ||
+        /请求的资源不存在/.test(error.message) ||
+        /未定义路由/.test(error.message));
+}
+function syntheticOrderResult() {
+    const orderId = randomUUID();
+    return {
+        success: true,
+        synthetic: true,
+        data: {
+            msg: "local-session-order",
+            data: { order_id: orderId },
+        },
+    };
+}
+/**
+ * 创建基金工作台订单。
+ * 当前部分环境未部署 nsfc-v2/apps/orders（404）；假说类工作流前端本就不建单，
+ * 此时回退为本地 UUID，仍可走 apps/execute。
+ */
+export async function createNsfcOrder(body) {
+    const client = new ApiClient();
+    try {
+        return await client.request(NSFC_ORDER_API_PATH, {
+            method: "POST",
+            body,
+        });
+    }
+    catch (error) {
+        if (isOrdersUnavailableError(error)) {
+            const fallback = syntheticOrderResult();
+            console.warn(`[nsfc] apps/orders 不可用，使用本地会话 orderId=${fallback.data?.data?.order_id}`);
+            return fallback;
+        }
+        throw error;
+    }
+}
+export function extractNsfcOrderId(order) {
+    const orderId = order.data?.data?.order_id;
+    if (typeof orderId === "string" && orderId) {
+        return orderId;
+    }
+    if (order.success === false) {
+        const message = (typeof order.message === "string" && order.message) ||
+            order.data?.msg ||
+            "基金工作台订单创建失败，请稍后重试";
+        throw new helixlifeError(helixlifeErrorCode.REQUEST_FAILED, message);
+    }
+    throw new helixlifeError(helixlifeErrorCode.INVALID_RESPONSE, "基金工作台订单响应缺少 order_id，请重试");
+}
+//# sourceMappingURL=apps.js.map

package/cli/dist/modules/fund/nsfc/apps.js.map

@@ -0,0 +1 @@
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package/cli/dist/modules/fund/nsfc/article-cache.d.ts

@@ -0,0 +1,14 @@
+export interface NsfcArticleCachePayload {
+    orderId: string;
+    article: string;
+    hypothesis: string;
+    program: string;
+    workflowRunId?: string;
+}
+export declare function __setNsfcArticleCacheDirForTesting(dir: string): void;
+export declare function getNsfcArticleCacheDir(): string;
+export declare function resolveNsfcArticleCachePath(orderId: string): string;
+export declare function saveNsfcArticleCache(payload: NsfcArticleCachePayload): Promise<boolean>;
+export declare function loadNsfcArticleCache(orderId: string): Promise<NsfcArticleCachePayload | null>;
+export declare function popNsfcArticleCache(orderId: string): Promise<NsfcArticleCachePayload | null>;
+//# sourceMappingURL=article-cache.d.ts.map

package/cli/dist/modules/fund/nsfc/article-cache.d.ts.map

@@ -0,0 +1 @@
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package/cli/dist/modules/fund/nsfc/article-cache.js

@@ -0,0 +1,79 @@
+/**
+ * NSFC 全文跨进程缓存（系统临时目录 helixlife-nsfc-article-cache/）
+ */
+import { randomBytes } from "node:crypto";
+import { chmod, mkdir, readFile, rename, rm, writeFile, } from "node:fs/promises";
+import { tmpdir } from "node:os";
+import { join } from "node:path";
+let CACHE_DIR = join(tmpdir(), "helixlife-nsfc-article-cache");
+const CACHE_FILE_PREFIX = "article-";
+const CACHE_FILE_EXT = ".json";
+export function __setNsfcArticleCacheDirForTesting(dir) {
+    CACHE_DIR = dir;
+}
+export function getNsfcArticleCacheDir() {
+    return CACHE_DIR;
+}
+export function resolveNsfcArticleCachePath(orderId) {
+    return join(CACHE_DIR, `${CACHE_FILE_PREFIX}${sanitizeOrderId(orderId)}${CACHE_FILE_EXT}`);
+}
+function sanitizeOrderId(orderId) {
+    return orderId.replace(/[^a-zA-Z0-9_.-]/g, "_");
+}
+async function ensureCacheDir() {
+    await mkdir(CACHE_DIR, { recursive: true });
+}
+async function atomicReplace(tempPath, finalPath) {
+    try {
+        await rename(tempPath, finalPath);
+    }
+    catch (error) {
+        if (process.platform === "win32") {
+            await rm(finalPath, { force: true });
+            await rename(tempPath, finalPath);
+            return;
+        }
+        throw error;
+    }
+}
+export async function saveNsfcArticleCache(payload) {
+    try {
+        if (!payload.orderId?.trim() || !payload.article?.trim()) {
+            throw new Error("orderId / article 不能为空");
+        }
+        await ensureCacheDir();
+        const finalPath = resolveNsfcArticleCachePath(payload.orderId);
+        const nonce = randomBytes(6).toString("hex");
+        const tempPath = `${finalPath}.${nonce}.tmp`;
+        await writeFile(tempPath, JSON.stringify(payload), "utf8");
+        await atomicReplace(tempPath, finalPath);
+        await chmod(finalPath, 0o600);
+        return true;
+    }
+    catch (error) {
+        console.warn(`[nsfc-article-cache] 写入失败 orderId=${payload.orderId}: ${error.message}`);
+        return false;
+    }
+}
+export async function loadNsfcArticleCache(orderId) {
+    if (!orderId?.trim())
+        return null;
+    try {
+        const raw = await readFile(resolveNsfcArticleCachePath(orderId), "utf8");
+        const entry = JSON.parse(raw);
+        if (!entry.article)
+            return null;
+        return { ...entry, orderId: entry.orderId || orderId };
+    }
+    catch {
+        return null;
+    }
+}
+export async function popNsfcArticleCache(orderId) {
+    const cached = await loadNsfcArticleCache(orderId);
+    if (!cached)
+        return null;
+    await rm(resolveNsfcArticleCachePath(orderId), { force: true }).catch(() => undefined);
+    return cached;
+}
+//# sourceMappingURL=article-cache.js.map

package/cli/dist/modules/fund/nsfc/article-cache.js.map

@@ -0,0 +1 @@
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package/cli/dist/modules/fund/nsfc/commands/article-create.d.ts

@@ -0,0 +1,8 @@
+import { type OutputFormat } from "../../../../core/index.js";
+export interface CreateNsfcArticleOptions {
+    orderId?: string;
+    yes?: boolean;
+    format?: OutputFormat;
+}
+export declare function runCreateNsfcArticle(options: CreateNsfcArticleOptions): Promise<void>;
+//# sourceMappingURL=article-create.d.ts.map

package/cli/dist/modules/fund/nsfc/commands/article-create.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"article-create.d.ts","sourceRoot":"","sources":["../../../../../src/modules/fund/nsfc/commands/article-create.ts"],"names":[],"mappings":"AACA,OAAO,EAKL,KAAK,YAAY,EAClB,MAAM,2BAA2B,CAAC;AAuBnC,MAAM,WAAW,wBAAwB;IACvC,OAAO,CAAC,EAAE,MAAM,CAAC;IACjB,GAAG,CAAC,EAAE,OAAO,CAAC;IACd,MAAM,CAAC,EAAE,YAAY,CAAC;CACvB;AAED,wBAAsB,oBAAoB,CACxC,OAAO,EAAE,wBAAwB,GAChC,OAAO,CAAC,IAAI,CAAC,CAgJf"}

package/cli/dist/modules/fund/nsfc/commands/article-create.js

@@ -0,0 +1,108 @@
+// Step4：生成全文
+import { helixlifeError, helixlifeErrorCode, printOutput, createFormatLogger, } from "../../../../core/index.js";
+import { wrapWorkbenchResult } from "../../../shared/result-wrapper.js";
+import { buildNsfcExecuteBody, createNsfcOrder, extractNsfcOrderId, } from "../apps.js";
+import { saveNsfcArticleCache } from "../article-cache.js";
+import { NSFC_APP_NAMES, NSFC_ARTICLE_APP_ID, NSFC_EXECUTE_API_PATH, } from "../constants.js";
+import { buildNsfcOutlineSlimBody, stringifyNsfcOutlineWorkflowInput, } from "../parse-outline.js";
+import { loadNsfcSessionCache, saveNsfcSessionCache, } from "../session-cache.js";
+import { formatElapsedHint, streamNsfcWorkflow } from "../sse-utils.js";
+export async function runCreateNsfcArticle(options) {
+    const format = options.format ?? "markdown";
+    const log = createFormatLogger(format);
+    if (!options.orderId?.trim()) {
+        throw new helixlifeError(helixlifeErrorCode.INVALID_ARGUMENT, "article create 必须提供 --order-id");
+    }
+    const session = await loadNsfcSessionCache(options.orderId);
+    if (!session) {
+        throw new helixlifeError(helixlifeErrorCode.INVALID_ARGUMENT, `会话缓存缺失：orderId=${options.orderId}`);
+    }
+    const outline = String(session.outline ?? "").trim();
+    if (!outline) {
+        throw new helixlifeError(helixlifeErrorCode.INVALID_ARGUMENT, "缺少确认提纲：请先 outline create / outline confirm");
+    }
+    if (!session.outlineConfirmed) {
+        throw new helixlifeError(helixlifeErrorCode.INVALID_ARGUMENT, "提纲尚未确认：请先执行 outline confirm");
+    }
+    const slim = buildNsfcOutlineSlimBody(session);
+    const hypothesis = slim.query;
+    if (!hypothesis) {
+        throw new helixlifeError(helixlifeErrorCode.INVALID_ARGUMENT, "缺少科学假说文本，无法生成全文");
+    }
+    const inputJson = stringifyNsfcOutlineWorkflowInput(outline, hypothesis, true);
+    log("接口正在处理中，请耐心等待...");
+    const childOrder = await createNsfcOrder({
+        index: 2,
+        count: 1,
+        query: hypothesis,
+        inputs: { input: inputJson, program: slim.inputs.program },
+        parent_order_id: session.orderId,
+    });
+    const childOrderId = extractNsfcOrderId(childOrder);
+    const body = buildNsfcExecuteBody({
+        query: hypothesis,
+        inputs: {
+            input: inputJson,
+            program: slim.inputs.program,
+        },
+        appId: NSFC_ARTICLE_APP_ID,
+        appName: NSFC_APP_NAMES.article,
+        orderId: childOrderId,
+        index: 2,
+        parentOrderId: session.orderId,
+        end: true,
+    });
+    const stream = await streamNsfcWorkflow({
+        path: NSFC_EXECUTE_API_PATH,
+        body,
+        format,
+        startLabel: "申请书全文生成中…",
+        progressLabel: "全文生成进行中",
+        finishLabel: "全文生成完成",
+        failureMessage: "全文生成失败，请稍后重试",
+        emptyMessage: "全文生成结果为空",
+    });
+    const fromOutput = typeof stream.outputs?.output === "string"
+        ? stream.outputs.output.trim()
+        : typeof stream.outputs?.text === "string"
+            ? stream.outputs.text.trim()
+            : "";
+    const article = (fromOutput || stream.text).trim();
+    if (!article) {
+        throw new helixlifeError(helixlifeErrorCode.INVALID_RESPONSE, "全文生成结果为空");
+    }
+    await saveNsfcSessionCache({
+        ...session,
+        article,
+        workflowRunId: stream.workflowRunId,
+    });
+    const cacheReady = await saveNsfcArticleCache({
+        orderId: session.orderId,
+        article,
+        hypothesis,
+        program: slim.inputs.program,
+        workflowRunId: stream.workflowRunId,
+    });
+    const result = {
+        article,
+        hypothesis,
+        program: slim.inputs.program,
+        ready: true,
+    };
+    if (format === "json") {
+        printOutput(wrapWorkbenchResult(result, { step: "article", subType: "nsfc" }, {
+            orderId: session.orderId,
+            workflowRunId: stream.workflowRunId,
+            cacheReady,
+            hasHypothesis: session.hasHypothesis,
+            nextSubStep: session.nextSubStep,
+            outlineAppSuffix: session.outlineAppSuffix,
+            readyForArticle: true,
+        }), "json");
+        return;
+    }
+    console.log(`\n## 申请书全文${formatElapsedHint(stream.elapsedTime)}\n`);
+    console.log(article);
+    console.log("\n请执行 article download 导出原始引文 MD+Word；可选技术路线图 / 假说机制图 / 格式转换。");
+}
+//# sourceMappingURL=article-create.js.map

package/cli/dist/modules/fund/nsfc/commands/article-create.js.map

@@ -0,0 +1 @@
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package/cli/dist/modules/fund/nsfc/commands/article-download.d.ts

@@ -0,0 +1,42 @@
+import { type OutputFormat } from "../../../../core/index.js";
+export interface DownloadNsfcArticleOptions {
+    orderId?: string;
+    file?: string;
+    output?: string;
+    produceId?: string;
+    format?: OutputFormat;
+}
+export interface NsfcArticleDownloadResult {
+    mdPath: string;
+    mdSize: number;
+    docxPath: string;
+    docxSize: number;
+    contentType: string | null;
+    filename?: string;
+}
+/**
+ * 将标题候选收成安全导出 basename（不含扩展名）。
+ * 对齐官网：整题作文件名、不截断；CLI 仅替换 Windows 非法字符以便 writeFile。
+ */
+export declare function toNsfcExportBasename(titleCandidate: string): string;
+/**
+ * 从全文 Markdown 提取项目标题（对齐官网 getTitleFromArticle）。
+ * 标签行「标题」无值时跳过，取下一行正文；「标题：xxx」同行取值；否则取首个非空内容行。
+ */
+export declare function extractNsfcArticleTitle(markdown: string): string;
+declare function convertMarkdownToDocx(markdown: string, produceId: string): Promise<{
+    buffer: Buffer;
+    contentType: string | null;
+    filename?: string;
+}>;
+/**
+ * 确定 docx 输出路径。
+ * article download 传入标题 basename；format-convert 可传固定 defaultName。
+ * 不再依赖转换 API 的 Content-Disposition 文件名。
+ */
+declare function resolveDocxPath(outputOption: string | undefined, preferredFilename?: string, defaultName?: string): string;
+declare function resolveMarkdownPath(docxPath: string): string;
+export declare function runDownloadNsfcArticle(options: DownloadNsfcArticleOptions): Promise<NsfcArticleDownloadResult>;
+/** 供 format-convert 复用的 docx 转换 */
+export { convertMarkdownToDocx, resolveDocxPath, resolveMarkdownPath };
+//# sourceMappingURL=article-download.d.ts.map

package/cli/dist/modules/fund/nsfc/commands/article-download.d.ts.map

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