gsd-pi 2.33.0-dev.bafba33 → 2.33.1-dev.235d83a

package/dist/resources/extensions/gsd/files.js

@@ -0,0 +1,937 @@
+// GSD Extension - File Parsing and I/O
+// Parsers for roadmap, plan, summary, and continue files.
+// Used by state derivation and the status widget.
+// Pure functions, zero Pi dependencies - uses only Node built-ins.
+import { promises as fs } from 'node:fs';
+import { resolve } from 'node:path';
+import { atomicWriteAsync } from './atomic-write.js';
+import { resolveMilestoneFile, relMilestoneFile, resolveGsdRootFile } from './paths.js';
+import { findMilestoneIds } from './guided-flow.js';
+import { checkExistingEnvKeys } from '../get-secrets-from-user.js';
+import { parseRoadmapSlices } from './roadmap-slices.js';
+import { nativeParseRoadmap, nativeExtractSection, nativeParsePlanFile, nativeParseSummaryFile, NATIVE_UNAVAILABLE } from './native-parser-bridge.js';
+import { debugTime, debugCount } from './debug-logger.js';
+import { CACHE_MAX } from './constants.js';
+import { splitFrontmatter, parseFrontmatterMap } from '../shared/frontmatter.js';
+// Re-export for downstream consumers
+export { splitFrontmatter, parseFrontmatterMap };
+// ─── Parse Cache ──────────────────────────────────────────────────────────
+/** Fast composite key: length + first/mid/last 100 chars. The middle sample
+ *  prevents collisions when only a few characters change in the interior of
+ *  a file (e.g., a checkbox [ ] → [x] that doesn't alter length or endpoints). */
+function cacheKey(content) {
+    const len = content.length;
+    const head = content.slice(0, 100);
+    const midStart = Math.max(0, Math.floor(len / 2) - 50);
+    const mid = len > 200 ? content.slice(midStart, midStart + 100) : '';
+    const tail = len > 100 ? content.slice(-100) : '';
+    return `${len}:${head}:${mid}:${tail}`;
+}
+const _parseCache = new Map();
+function cachedParse(content, tag, parseFn) {
+    const key = tag + '|' + cacheKey(content);
+    if (_parseCache.has(key))
+        return _parseCache.get(key);
+    if (_parseCache.size >= CACHE_MAX)
+        _parseCache.clear();
+    const result = parseFn(content);
+    _parseCache.set(key, result);
+    return result;
+}
+/** Clear the module-scoped parse cache. Call when files change on disk. */
+export function clearParseCache() {
+    _parseCache.clear();
+}
+// ─── Helpers ───────────────────────────────────────────────────────────────
+/** Extract the text after a heading at a given level, up to the next heading of same or higher level. */
+export function extractSection(body, heading, level = 2) {
+    // Try native parser first for better performance on large files
+    const nativeResult = nativeExtractSection(body, heading, level);
+    if (nativeResult !== NATIVE_UNAVAILABLE)
+        return nativeResult;
+    const prefix = '#'.repeat(level) + ' ';
+    const regex = new RegExp(`^${prefix}${escapeRegex(heading)}\\s*$`, 'm');
+    const match = regex.exec(body);
+    if (!match)
+        return null;
+    const start = match.index + match[0].length;
+    const rest = body.slice(start);
+    const nextHeading = rest.match(new RegExp(`^#{1,${level}} `, 'm'));
+    const end = nextHeading ? nextHeading.index : rest.length;
+    return rest.slice(0, end).trim();
+}
+/** Extract all sections at a given level, returning heading → content map. */
+export function extractAllSections(body, level = 2) {
+    const prefix = '#'.repeat(level) + ' ';
+    const regex = new RegExp(`^${prefix}(.+)$`, 'gm');
+    const sections = new Map();
+    const matches = [...body.matchAll(regex)];
+    for (let i = 0; i < matches.length; i++) {
+        const heading = matches[i][1].trim();
+        const start = matches[i].index + matches[i][0].length;
+        const end = i + 1 < matches.length ? matches[i + 1].index : body.length;
+        sections.set(heading, body.slice(start, end).trim());
+    }
+    return sections;
+}
+function escapeRegex(s) {
+    return s.replace(/[.*+?^${}()|[\]\\]/g, '\\$&');
+}
+/** Parse bullet list items from a text block. */
+export function parseBullets(text) {
+    return text.split('\n')
+        .map(l => l.replace(/^\s*[-*]\s+/, '').trim())
+        .filter(l => l.length > 0 && !l.startsWith('#'));
+}
+/** Extract key: value from bold-prefixed lines like "**Key:** Value" */
+export function extractBoldField(text, key) {
+    const regex = new RegExp(`^\\*\\*${escapeRegex(key)}:\\*\\*\\s*(.+)$`, 'm');
+    const match = regex.exec(text);
+    return match ? match[1].trim() : null;
+}
+// ─── Roadmap Parser ────────────────────────────────────────────────────────
+export function parseRoadmap(content) {
+    return cachedParse(content, 'roadmap', _parseRoadmapImpl);
+}
+function _parseRoadmapImpl(content) {
+    const stopTimer = debugTime("parse-roadmap");
+    // Try native parser first for better performance
+    const nativeResult = nativeParseRoadmap(content);
+    if (nativeResult) {
+        stopTimer({ native: true, slices: nativeResult.slices.length, boundaryEntries: nativeResult.boundaryMap.length });
+        debugCount("parseRoadmapCalls");
+        return nativeResult;
+    }
+    const lines = content.split('\n');
+    const h1 = lines.find(l => l.startsWith('# '));
+    const title = h1 ? h1.slice(2).trim() : '';
+    const vision = extractBoldField(content, 'Vision') || '';
+    const scSection = extractSection(content, 'Success Criteria', 2) ||
+        (() => {
+            const idx = content.indexOf('**Success Criteria:**');
+            if (idx === -1)
+                return '';
+            const rest = content.slice(idx);
+            const nextSection = rest.indexOf('\n---');
+            const block = rest.slice(0, nextSection === -1 ? undefined : nextSection);
+            const firstNewline = block.indexOf('\n');
+            return firstNewline === -1 ? '' : block.slice(firstNewline + 1);
+        })();
+    const successCriteria = scSection ? parseBullets(scSection) : [];
+    // Slices
+    const slices = parseRoadmapSlices(content);
+    // Boundary map
+    const boundaryMap = [];
+    const bmSection = extractSection(content, 'Boundary Map');
+    if (bmSection) {
+        const h3Sections = extractAllSections(bmSection, 3);
+        for (const [heading, sectionContent] of h3Sections) {
+            const arrowMatch = heading.match(/^(\S+)\s*→\s*(\S+)/);
+            if (!arrowMatch)
+                continue;
+            const fromSlice = arrowMatch[1];
+            const toSlice = arrowMatch[2];
+            let produces = '';
+            let consumes = '';
+            // Use indexOf-based parsing instead of [\s\S]*? regex to avoid
+            // catastrophic backtracking on content with code fences (#468).
+            const prodIdx = sectionContent.search(/^Produces:\s*$/m);
+            if (prodIdx !== -1) {
+                const afterProd = sectionContent.indexOf('\n', prodIdx);
+                if (afterProd !== -1) {
+                    const consIdx = sectionContent.search(/^Consumes/m);
+                    const endIdx = consIdx !== -1 && consIdx > afterProd ? consIdx : sectionContent.length;
+                    produces = sectionContent.slice(afterProd + 1, endIdx).trim();
+                }
+            }
+            const consLineMatch = sectionContent.match(/^Consumes[^:]*:\s*(.+)$/m);
+            if (consLineMatch) {
+                consumes = consLineMatch[1].trim();
+            }
+            if (!consumes) {
+                const consIdx = sectionContent.search(/^Consumes[^:]*:\s*$/m);
+                if (consIdx !== -1) {
+                    const afterCons = sectionContent.indexOf('\n', consIdx);
+                    if (afterCons !== -1) {
+                        consumes = sectionContent.slice(afterCons + 1).trim();
+                    }
+                }
+            }
+            boundaryMap.push({ fromSlice, toSlice, produces, consumes });
+        }
+    }
+    const result = { title, vision, successCriteria, slices, boundaryMap };
+    stopTimer({ native: false, slices: slices.length, boundaryEntries: boundaryMap.length });
+    debugCount("parseRoadmapCalls");
+    return result;
+}
+// ─── Secrets Manifest Parser ───────────────────────────────────────────────
+const VALID_STATUSES = new Set(['pending', 'collected', 'skipped']);
+export function parseSecretsManifest(content) {
+    const milestone = extractBoldField(content, 'Milestone') || '';
+    const generatedAt = extractBoldField(content, 'Generated') || '';
+    const h3Sections = extractAllSections(content, 3);
+    const entries = [];
+    for (const [heading, sectionContent] of h3Sections) {
+        const key = heading.trim();
+        if (!key)
+            continue;
+        const service = extractBoldField(sectionContent, 'Service') || '';
+        const dashboardUrl = extractBoldField(sectionContent, 'Dashboard') || '';
+        const formatHint = extractBoldField(sectionContent, 'Format hint') || '';
+        const rawStatus = (extractBoldField(sectionContent, 'Status') || 'pending').toLowerCase().trim();
+        const status = VALID_STATUSES.has(rawStatus) ? rawStatus : 'pending';
+        const destination = extractBoldField(sectionContent, 'Destination') || 'dotenv';
+        // Extract numbered guidance list (lines matching "1. ...", "2. ...", etc.)
+        const guidance = [];
+        for (const line of sectionContent.split('\n')) {
+            const numMatch = line.match(/^\s*\d+\.\s+(.+)/);
+            if (numMatch) {
+                guidance.push(numMatch[1].trim());
+            }
+        }
+        entries.push({ key, service, dashboardUrl, guidance, formatHint, status, destination });
+    }
+    return { milestone, generatedAt, entries };
+}
+// ─── Secrets Manifest Formatter ───────────────────────────────────────────
+export function formatSecretsManifest(manifest) {
+    const lines = [];
+    lines.push('# Secrets Manifest');
+    lines.push('');
+    lines.push(`**Milestone:** ${manifest.milestone}`);
+    lines.push(`**Generated:** ${manifest.generatedAt}`);
+    for (const entry of manifest.entries) {
+        lines.push('');
+        lines.push(`### ${entry.key}`);
+        lines.push('');
+        lines.push(`**Service:** ${entry.service}`);
+        if (entry.dashboardUrl) {
+            lines.push(`**Dashboard:** ${entry.dashboardUrl}`);
+        }
+        if (entry.formatHint) {
+            lines.push(`**Format hint:** ${entry.formatHint}`);
+        }
+        lines.push(`**Status:** ${entry.status}`);
+        lines.push(`**Destination:** ${entry.destination}`);
+        lines.push('');
+        for (let i = 0; i < entry.guidance.length; i++) {
+            lines.push(`${i + 1}. ${entry.guidance[i]}`);
+        }
+    }
+    return lines.join('\n') + '\n';
+}
+// ─── Slice Plan Parser ─────────────────────────────────────────────────────
+export function parsePlan(content) {
+    return cachedParse(content, 'plan', _parsePlanImpl);
+}
+function _parsePlanImpl(content) {
+    const stopTimer = debugTime("parse-plan");
+    // Try native parser first for better performance
+    const nativeResult = nativeParsePlanFile(content);
+    if (nativeResult) {
+        stopTimer({ native: true });
+        return {
+            id: nativeResult.id,
+            title: nativeResult.title,
+            goal: nativeResult.goal,
+            demo: nativeResult.demo,
+            mustHaves: nativeResult.mustHaves,
+            tasks: nativeResult.tasks.map(t => ({
+                id: t.id,
+                title: t.title,
+                description: t.description,
+                done: t.done,
+                estimate: t.estimate,
+                ...(t.files.length > 0 ? { files: t.files } : {}),
+                ...(t.verify ? { verify: t.verify } : {}),
+            })),
+            filesLikelyTouched: nativeResult.filesLikelyTouched,
+        };
+    }
+    const lines = content.split('\n');
+    const h1 = lines.find(l => l.startsWith('# '));
+    let id = '';
+    let title = '';
+    if (h1) {
+        const match = h1.match(/^#\s+(\w+):\s+(.+)/);
+        if (match) {
+            id = match[1];
+            title = match[2].trim();
+        }
+        else {
+            title = h1.slice(2).trim();
+        }
+    }
+    const goal = extractBoldField(content, 'Goal') || '';
+    const demo = extractBoldField(content, 'Demo') || '';
+    const mhSection = extractSection(content, 'Must-Haves');
+    const mustHaves = mhSection ? parseBullets(mhSection) : [];
+    const tasksSection = extractSection(content, 'Tasks');
+    const tasks = [];
+    if (tasksSection) {
+        const taskLines = tasksSection.split('\n');
+        let currentTask = null;
+        for (const line of taskLines) {
+            const cbMatch = line.match(/^-\s+\[([ xX])\]\s+\*\*([\w.]+):\s+(.+?)\*\*\s*(.*)/);
+            if (cbMatch) {
+                if (currentTask)
+                    tasks.push(currentTask);
+                const rest = cbMatch[4] || '';
+                const estMatch = rest.match(/`est:([^`]+)`/);
+                const estimate = estMatch ? estMatch[1] : '';
+                currentTask = {
+                    id: cbMatch[2],
+                    title: cbMatch[3],
+                    description: '',
+                    done: cbMatch[1].toLowerCase() === 'x',
+                    estimate,
+                };
+            }
+            else if (currentTask && line.match(/^\s*-\s+Files:\s*(.*)/)) {
+                const filesMatch = line.match(/^\s*-\s+Files:\s*(.*)/);
+                if (filesMatch) {
+                    currentTask.files = filesMatch[1]
+                        .split(',')
+                        .map(f => f.replace(/`/g, '').trim())
+                        .filter(f => f.length > 0);
+                }
+            }
+            else if (currentTask && line.match(/^\s*-\s+Verify:\s*(.*)/)) {
+                const verifyMatch = line.match(/^\s*-\s+Verify:\s*(.*)/);
+                if (verifyMatch) {
+                    currentTask.verify = verifyMatch[1].trim();
+                }
+            }
+            else if (currentTask && line.trim() && !line.startsWith('#')) {
+                const desc = line.trim();
+                if (desc) {
+                    currentTask.description = currentTask.description
+                        ? currentTask.description + ' ' + desc
+                        : desc;
+                }
+            }
+        }
+        if (currentTask)
+            tasks.push(currentTask);
+    }
+    const filesSection = extractSection(content, 'Files Likely Touched');
+    const filesLikelyTouched = filesSection ? parseBullets(filesSection) : [];
+    const result = { id, title, goal, demo, mustHaves, tasks, filesLikelyTouched };
+    stopTimer({ tasks: tasks.length });
+    debugCount("parsePlanCalls");
+    return result;
+}
+// ─── Summary Parser ────────────────────────────────────────────────────────
+export function parseSummary(content) {
+    return cachedParse(content, 'summary', _parseSummaryImpl);
+}
+function _parseSummaryImpl(content) {
+    // Try native parser first for better performance
+    const nativeResult = nativeParseSummaryFile(content);
+    if (nativeResult) {
+        const nfm = nativeResult.frontmatter;
+        return {
+            frontmatter: {
+                id: nfm.id,
+                parent: nfm.parent,
+                milestone: nfm.milestone,
+                provides: nfm.provides,
+                requires: nfm.requires,
+                affects: nfm.affects,
+                key_files: nfm.keyFiles,
+                key_decisions: nfm.keyDecisions,
+                patterns_established: nfm.patternsEstablished,
+                drill_down_paths: nfm.drillDownPaths,
+                observability_surfaces: nfm.observabilitySurfaces,
+                duration: nfm.duration,
+                verification_result: nfm.verificationResult,
+                completed_at: nfm.completedAt,
+                blocker_discovered: nfm.blockerDiscovered,
+            },
+            title: nativeResult.title,
+            oneLiner: nativeResult.oneLiner,
+            whatHappened: nativeResult.whatHappened,
+            deviations: nativeResult.deviations,
+            filesModified: nativeResult.filesModified,
+        };
+    }
+    const [fmLines, body] = splitFrontmatter(content);
+    const fm = fmLines ? parseFrontmatterMap(fmLines) : {};
+    const asStringArray = (v) => Array.isArray(v) ? v : (typeof v === 'string' && v ? [v] : []);
+    const frontmatter = {
+        id: fm.id || '',
+        parent: fm.parent || '',
+        milestone: fm.milestone || '',
+        provides: asStringArray(fm.provides),
+        requires: (fm.requires || []).map(r => ({
+            slice: r.slice || '',
+            provides: r.provides || '',
+        })),
+        affects: asStringArray(fm.affects),
+        key_files: asStringArray(fm.key_files),
+        key_decisions: asStringArray(fm.key_decisions),
+        patterns_established: asStringArray(fm.patterns_established),
+        drill_down_paths: asStringArray(fm.drill_down_paths),
+        observability_surfaces: asStringArray(fm.observability_surfaces),
+        duration: fm.duration || '',
+        verification_result: fm.verification_result || 'untested',
+        completed_at: fm.completed_at || '',
+        blocker_discovered: fm.blocker_discovered === 'true' || fm.blocker_discovered === true,
+    };
+    const bodyLines = body.split('\n');
+    const h1 = bodyLines.find(l => l.startsWith('# '));
+    const title = h1 ? h1.slice(2).trim() : '';
+    const h1Idx = bodyLines.indexOf(h1 || '');
+    let oneLiner = '';
+    for (let i = h1Idx + 1; i < bodyLines.length; i++) {
+        const line = bodyLines[i].trim();
+        if (!line)
+            continue;
+        if (line.startsWith('**') && line.endsWith('**')) {
+            oneLiner = line.slice(2, -2);
+        }
+        break;
+    }
+    const whatHappened = extractSection(body, 'What Happened') || '';
+    const deviations = extractSection(body, 'Deviations') || '';
+    const filesSection = extractSection(body, 'Files Created/Modified') || extractSection(body, 'Files Modified');
+    const filesModified = [];
+    if (filesSection) {
+        for (const line of filesSection.split('\n')) {
+            const trimmed = line.replace(/^\s*[-*]\s+/, '').trim();
+            if (!trimmed || trimmed.startsWith('#'))
+                continue;
+            const fileMatch = trimmed.match(/^`([^`]+)`\s*[—–-]\s*(.+)/);
+            if (fileMatch) {
+                filesModified.push({ path: fileMatch[1], description: fileMatch[2].trim() });
+            }
+        }
+    }
+    return { frontmatter, title, oneLiner, whatHappened, deviations, filesModified };
+}
+// ─── Continue Parser ───────────────────────────────────────────────────────
+export function parseContinue(content) {
+    return cachedParse(content, 'continue', _parseContinueImpl);
+}
+function _parseContinueImpl(content) {
+    const [fmLines, body] = splitFrontmatter(content);
+    const fm = fmLines ? parseFrontmatterMap(fmLines) : {};
+    const frontmatter = {
+        milestone: fm.milestone || '',
+        slice: fm.slice || '',
+        task: fm.task || '',
+        step: typeof fm.step === 'string' ? parseInt(fm.step) : fm.step || 0,
+        totalSteps: typeof fm.total_steps === 'string' ? parseInt(fm.total_steps) : fm.total_steps ||
+            (typeof fm.totalSteps === 'string' ? parseInt(fm.totalSteps) : fm.totalSteps || 0),
+        status: (fm.status || 'in_progress'),
+        savedAt: fm.saved_at || fm.savedAt || '',
+    };
+    const completedWork = extractSection(body, 'Completed Work') || '';
+    const remainingWork = extractSection(body, 'Remaining Work') || '';
+    const decisions = extractSection(body, 'Decisions Made') || '';
+    const context = extractSection(body, 'Context') || '';
+    const nextAction = extractSection(body, 'Next Action') || '';
+    return { frontmatter, completedWork, remainingWork, decisions, context, nextAction };
+}
+// ─── Continue Formatter ────────────────────────────────────────────────────
+function formatFrontmatter(data) {
+    const lines = ['---'];
+    for (const [key, value] of Object.entries(data)) {
+        if (value === undefined || value === null)
+            continue;
+        if (Array.isArray(value)) {
+            if (value.length === 0) {
+                lines.push(`${key}: []`);
+            }
+            else if (typeof value[0] === 'object' && value[0] !== null) {
+                lines.push(`${key}:`);
+                for (const obj of value) {
+                    const entries = Object.entries(obj);
+                    if (entries.length > 0) {
+                        lines.push(`  - ${entries[0][0]}: ${entries[0][1]}`);
+                        for (let i = 1; i < entries.length; i++) {
+                            lines.push(`    ${entries[i][0]}: ${entries[i][1]}`);
+                        }
+                    }
+                }
+            }
+            else {
+                lines.push(`${key}:`);
+                for (const item of value) {
+                    lines.push(`  - ${item}`);
+                }
+            }
+        }
+        else {
+            lines.push(`${key}: ${value}`);
+        }
+    }
+    lines.push('---');
+    return lines.join('\n');
+}
+export function formatContinue(cont) {
+    const fm = cont.frontmatter;
+    const fmData = {
+        milestone: fm.milestone,
+        slice: fm.slice,
+        task: fm.task,
+        step: fm.step,
+        total_steps: fm.totalSteps,
+        status: fm.status,
+        saved_at: fm.savedAt,
+    };
+    const lines = [];
+    lines.push(formatFrontmatter(fmData));
+    lines.push('');
+    lines.push('## Completed Work');
+    lines.push(cont.completedWork);
+    lines.push('');
+    lines.push('## Remaining Work');
+    lines.push(cont.remainingWork);
+    lines.push('');
+    lines.push('## Decisions Made');
+    lines.push(cont.decisions);
+    lines.push('');
+    lines.push('## Context');
+    lines.push(cont.context);
+    lines.push('');
+    lines.push('## Next Action');
+    lines.push(cont.nextAction);
+    return lines.join('\n');
+}
+// ─── File I/O ──────────────────────────────────────────────────────────────
+/**
+ * Load a file from disk. Returns content string or null if file doesn't exist.
+ */
+export async function loadFile(path) {
+    try {
+        return await fs.readFile(path, 'utf-8');
+    }
+    catch (err) {
+        if (err.code === 'ENOENT')
+            return null;
+        throw err;
+    }
+}
+/**
+ * Save content to a file atomically (write to temp, then rename).
+ * Creates parent directories if needed.
+ */
+export async function saveFile(path, content) {
+    await atomicWriteAsync(path, content);
+}
+export function parseRequirementCounts(content) {
+    const counts = {
+        active: 0,
+        validated: 0,
+        deferred: 0,
+        outOfScope: 0,
+        blocked: 0,
+        total: 0,
+    };
+    if (!content)
+        return counts;
+    const sections = [
+        { key: 'active', heading: 'Active' },
+        { key: 'validated', heading: 'Validated' },
+        { key: 'deferred', heading: 'Deferred' },
+        { key: 'outOfScope', heading: 'Out of Scope' },
+    ];
+    for (const section of sections) {
+        const text = extractSection(content, section.heading, 2);
+        if (!text)
+            continue;
+        const matches = text.match(/^###\s+[A-Z][\w-]*\d+\s+—/gm);
+        counts[section.key] = matches ? matches.length : 0;
+    }
+    const blockedMatches = content.match(/^-\s+Status:\s+blocked\s*$/gim);
+    counts.blocked = blockedMatches ? blockedMatches.length : 0;
+    counts.total = counts.active + counts.validated + counts.deferred + counts.outOfScope;
+    return counts;
+}
+// ─── Task Plan Must-Haves Parser ───────────────────────────────────────────
+/**
+ * Parse must-have items from a task plan's `## Must-Haves` section.
+ * Returns structured items with checkbox state. Handles YAML frontmatter,
+ * all common checkbox variants (`[ ]`, `[x]`, `[X]`), plain bullets (no checkbox),
+ * and indented variants. Returns empty array when the section is missing or empty.
+ */
+export function parseTaskPlanMustHaves(content) {
+    const [, body] = splitFrontmatter(content);
+    const sectionText = extractSection(body, 'Must-Haves');
+    if (!sectionText)
+        return [];
+    const bullets = parseBullets(sectionText);
+    if (bullets.length === 0)
+        return [];
+    return bullets.map(line => {
+        const cbMatch = line.match(/^\[([xX ])\]\s+(.+)/);
+        if (cbMatch) {
+            return {
+                text: cbMatch[2].trim(),
+                checked: cbMatch[1].toLowerCase() === 'x',
+            };
+        }
+        // No checkbox - treat as unchecked with full line as text
+        return { text: line.trim(), checked: false };
+    });
+}
+// ─── Must-Have Summary Matching ────────────────────────────────────────────
+/** Common short words to exclude from substring matching. */
+const COMMON_WORDS = new Set([
+    'the', 'and', 'for', 'are', 'but', 'not', 'you', 'all', 'can', 'had', 'her',
+    'was', 'one', 'our', 'out', 'has', 'its', 'let', 'say', 'she', 'too', 'use',
+    'with', 'have', 'from', 'this', 'that', 'they', 'been', 'each', 'when', 'will',
+    'does', 'into', 'also', 'than', 'them', 'then', 'some', 'what', 'only', 'just',
+    'more', 'make', 'like', 'made', 'over', 'such', 'take', 'most', 'very', 'must',
+    'file', 'test', 'tests', 'task', 'new', 'add', 'added', 'existing',
+]);
+/**
+ * Count how many must-have items are mentioned in a summary.
+ *
+ * Matching heuristic per must-have:
+ * 1. Extract all backtick-enclosed code tokens (e.g. `inspectFoo`).
+ *    If any code token appears case-insensitively in the summary, count as mentioned.
+ * 2. If no code tokens exist, check if any significant word (≥4 chars, not a common word)
+ *    from the must-have text appears in the summary (case-insensitive).
+ *
+ * Returns the count of must-haves that had at least one match.
+ */
+export function countMustHavesMentionedInSummary(mustHaves, summaryContent) {
+    if (!summaryContent || mustHaves.length === 0)
+        return 0;
+    const summaryLower = summaryContent.toLowerCase();
+    let count = 0;
+    for (const mh of mustHaves) {
+        // Extract backtick-enclosed code tokens
+        const codeTokens = [];
+        const codeRegex = /`([^`]+)`/g;
+        let match;
+        while ((match = codeRegex.exec(mh.text)) !== null) {
+            codeTokens.push(match[1]);
+        }
+        if (codeTokens.length > 0) {
+            // Strategy 1: any code token found in summary (case-insensitive)
+            const found = codeTokens.some(token => summaryLower.includes(token.toLowerCase()));
+            if (found)
+                count++;
+        }
+        else {
+            // Strategy 2: significant substring matching
+            // Split into words, keep words ≥4 chars that aren't common
+            const words = mh.text.replace(/[^\w\s]/g, ' ').split(/\s+/).filter(w => w.length >= 4 && !COMMON_WORDS.has(w.toLowerCase()));
+            const found = words.some(word => summaryLower.includes(word.toLowerCase()));
+            if (found)
+                count++;
+        }
+    }
+    return count;
+}
+/**
+ * Extract the UAT type from a UAT file's raw content.
+ *
+ * UAT files have no YAML frontmatter - pass raw file content directly.
+ * Classification is leading-keyword-only: e.g. `mixed (artifact-driven + live-runtime)` → `'mixed'`.
+ *
+ * Returns `undefined` when:
+ * - the `## UAT Type` section is absent
+ * - no `UAT mode:` bullet is found in the section
+ * - the value does not start with a recognised keyword
+ */
+export function extractUatType(content) {
+    const sectionText = extractSection(content, 'UAT Type');
+    if (!sectionText)
+        return undefined;
+    const bullets = parseBullets(sectionText);
+    const modeBullet = bullets.find(b => b.startsWith('UAT mode:'));
+    if (!modeBullet)
+        return undefined;
+    const rawValue = modeBullet.slice('UAT mode:'.length).trim().toLowerCase();
+    if (rawValue.startsWith('artifact-driven'))
+        return 'artifact-driven';
+    if (rawValue.startsWith('live-runtime'))
+        return 'live-runtime';
+    if (rawValue.startsWith('human-experience'))
+        return 'human-experience';
+    if (rawValue.startsWith('mixed'))
+        return 'mixed';
+    return undefined;
+}
+/**
+ * Extract the `depends_on` list from M00x-CONTEXT.md YAML frontmatter.
+ * Returns [] when: content is null, no frontmatter block, field absent, or field is empty.
+ * Normalizes each dep ID to uppercase (e.g. 'm001' → 'M001').
+ */
+export function parseContextDependsOn(content) {
+    if (!content)
+        return [];
+    const [fmLines] = splitFrontmatter(content);
+    if (!fmLines)
+        return [];
+    const fm = parseFrontmatterMap(fmLines);
+    const raw = fm['depends_on'];
+    if (!Array.isArray(raw) || raw.length === 0)
+        return [];
+    return raw.map(s => String(s).trim()).filter(Boolean);
+}
+/**
+ * Inline the prior milestone's SUMMARY.md as context for the current milestone's planning prompt.
+ * Returns null when: (1) `mid` is the first milestone, (2) prior milestone has no SUMMARY file.
+ *
+ * Uses the shared findMilestoneIds to scan the milestones directory.
+ */
+export async function inlinePriorMilestoneSummary(mid, base) {
+    const sorted = findMilestoneIds(base);
+    if (sorted.length === 0)
+        return null;
+    const idx = sorted.indexOf(mid);
+    if (idx <= 0)
+        return null;
+    const prevMid = sorted[idx - 1];
+    const absPath = resolveMilestoneFile(base, prevMid, "SUMMARY");
+    const relPath = relMilestoneFile(base, prevMid, "SUMMARY");
+    const content = absPath ? await loadFile(absPath) : null;
+    if (!content)
+        return null;
+    return `### Prior Milestone Summary\nSource: \`${relPath}\`\n\n${content.trim()}`;
+}
+// ─── Manifest Status ──────────────────────────────────────────────────────
+/**
+ * Read a secrets manifest from disk and cross-reference each entry's status
+ * with the current environment (.env + process.env).
+ *
+ * Returns `null` when no manifest file exists (path resolution failure or
+ * file not on disk) - callers can distinguish "no manifest" from "empty manifest".
+ */
+export async function getManifestStatus(base, milestoneId) {
+    const resolvedPath = resolveMilestoneFile(base, milestoneId, 'SECRETS');
+    if (!resolvedPath)
+        return null;
+    const content = await loadFile(resolvedPath);
+    if (!content)
+        return null;
+    const manifest = parseSecretsManifest(content);
+    const keys = manifest.entries.map(e => e.key);
+    const existingKeys = await checkExistingEnvKeys(keys, resolve(base, '.env'));
+    const existingSet = new Set(existingKeys);
+    const result = {
+        pending: [],
+        collected: [],
+        skipped: [],
+        existing: [],
+    };
+    for (const entry of manifest.entries) {
+        if (existingSet.has(entry.key)) {
+            result.existing.push(entry.key);
+        }
+        else {
+            result[entry.status].push(entry.key);
+        }
+    }
+    return result;
+}
+export async function appendOverride(basePath, change, appliedAt) {
+    const overridesPath = resolveGsdRootFile(basePath, "OVERRIDES");
+    const timestamp = new Date().toISOString();
+    const entry = [
+        `## Override: ${timestamp}`,
+        "",
+        `**Change:** ${change}`,
+        `**Scope:** active`,
+        `**Applied-at:** ${appliedAt}`,
+        "",
+        "---",
+        "",
+    ].join("\n");
+    const existing = await loadFile(overridesPath);
+    if (existing) {
+        await saveFile(overridesPath, existing.trimEnd() + "\n\n" + entry);
+    }
+    else {
+        const header = [
+            "# GSD Overrides",
+            "",
+            "User-issued overrides that supersede plan document content.",
+            "",
+            "---",
+            "",
+        ].join("\n");
+        await saveFile(overridesPath, header + entry);
+    }
+}
+export async function appendKnowledge(basePath, type, entry, scope) {
+    const knowledgePath = resolveGsdRootFile(basePath, "KNOWLEDGE");
+    const existing = await loadFile(knowledgePath);
+    if (existing) {
+        // Find the next ID for this type
+        const prefix = type === "rule" ? "K" : type === "pattern" ? "P" : "L";
+        const idPattern = new RegExp(`^\\| ${prefix}(\\d+)`, "gm");
+        let maxId = 0;
+        let match;
+        while ((match = idPattern.exec(existing)) !== null) {
+            const num = parseInt(match[1], 10);
+            if (num > maxId)
+                maxId = num;
+        }
+        const nextId = `${prefix}${String(maxId + 1).padStart(3, "0")}`;
+        // Build the table row
+        let row;
+        if (type === "rule") {
+            row = `| ${nextId} | ${scope} | ${entry} | — | manual |`;
+        }
+        else if (type === "pattern") {
+            row = `| ${nextId} | ${entry} | — | ${scope} |`;
+        }
+        else {
+            row = `| ${nextId} | ${entry} | — | — | ${scope} |`;
+        }
+        // Find the right section and append after the table header
+        const sectionHeading = type === "rule" ? "## Rules" : type === "pattern" ? "## Patterns" : "## Lessons Learned";
+        const sectionIdx = existing.indexOf(sectionHeading);
+        if (sectionIdx !== -1) {
+            // Find the end of the table header row (the |---|...| line)
+            const afterHeading = existing.indexOf("\n", sectionIdx);
+            // Find the next section or end
+            const nextSection = existing.indexOf("\n## ", afterHeading + 1);
+            const insertPoint = nextSection !== -1 ? nextSection : existing.length;
+            // Insert row before the next section (or at end)
+            const before = existing.slice(0, insertPoint).trimEnd();
+            const after = existing.slice(insertPoint);
+            await saveFile(knowledgePath, before + "\n" + row + "\n" + after);
+        }
+        else {
+            // Section not found — append at end
+            await saveFile(knowledgePath, existing.trimEnd() + "\n\n" + row + "\n");
+        }
+    }
+    else {
+        // Create file from scratch with template header
+        const header = [
+            "# Project Knowledge",
+            "",
+            "Append-only register of project-specific rules, patterns, and lessons learned.",
+            "Agents read this before every unit. Add entries when you discover something worth remembering.",
+            "",
+        ].join("\n");
+        let content;
+        if (type === "rule") {
+            content = header + [
+                "## Rules",
+                "",
+                "| # | Scope | Rule | Why | Added |",
+                "|---|-------|------|-----|-------|",
+                `| K001 | ${scope} | ${entry} | — | manual |`,
+                "",
+                "## Patterns",
+                "",
+                "| # | Pattern | Where | Notes |",
+                "|---|---------|-------|-------|",
+                "",
+                "## Lessons Learned",
+                "",
+                "| # | What Happened | Root Cause | Fix | Scope |",
+                "|---|--------------|------------|-----|-------|",
+                "",
+            ].join("\n");
+        }
+        else if (type === "pattern") {
+            content = header + [
+                "## Rules",
+                "",
+                "| # | Scope | Rule | Why | Added |",
+                "|---|-------|------|-----|-------|",
+                "",
+                "## Patterns",
+                "",
+                "| # | Pattern | Where | Notes |",
+                "|---|---------|-------|-------|",
+                `| P001 | ${entry} | — | ${scope} |`,
+                "",
+                "## Lessons Learned",
+                "",
+                "| # | What Happened | Root Cause | Fix | Scope |",
+                "|---|--------------|------------|-----|-------|",
+                "",
+            ].join("\n");
+        }
+        else {
+            content = header + [
+                "## Rules",
+                "",
+                "| # | Scope | Rule | Why | Added |",
+                "|---|-------|------|-----|-------|",
+                "",
+                "## Patterns",
+                "",
+                "| # | Pattern | Where | Notes |",
+                "|---|---------|-------|-------|",
+                "",
+                "## Lessons Learned",
+                "",
+                "| # | What Happened | Root Cause | Fix | Scope |",
+                "|---|--------------|------------|-----|-------|",
+                `| L001 | ${entry} | — | — | ${scope} |`,
+                "",
+            ].join("\n");
+        }
+        await saveFile(knowledgePath, content);
+    }
+}
+export async function loadActiveOverrides(basePath) {
+    const overridesPath = resolveGsdRootFile(basePath, "OVERRIDES");
+    const content = await loadFile(overridesPath);
+    if (!content)
+        return [];
+    return parseOverrides(content).filter(o => o.scope === "active");
+}
+export function parseOverrides(content) {
+    const overrides = [];
+    const blocks = content.split(/^## Override: /m).slice(1);
+    for (const block of blocks) {
+        const lines = block.split("\n");
+        const timestamp = lines[0]?.trim() ?? "";
+        let change = "";
+        let scope = "active";
+        let appliedAt = "";
+        for (const line of lines) {
+            const changeMatch = line.match(/^\*\*Change:\*\*\s*(.+)$/);
+            if (changeMatch)
+                change = changeMatch[1].trim();
+            const scopeMatch = line.match(/^\*\*Scope:\*\*\s*(.+)$/);
+            if (scopeMatch)
+                scope = scopeMatch[1].trim();
+            const appliedMatch = line.match(/^\*\*Applied-at:\*\*\s*(.+)$/);
+            if (appliedMatch)
+                appliedAt = appliedMatch[1].trim();
+        }
+        if (change) {
+            overrides.push({ timestamp, change, scope, appliedAt });
+        }
+    }
+    return overrides;
+}
+export function formatOverridesSection(overrides) {
+    if (overrides.length === 0)
+        return "";
+    const entries = overrides.map((o, i) => [
+        `${i + 1}. **${o.change}**`,
+        `   _Issued: ${o.timestamp} during ${o.appliedAt}_`,
+    ].join("\n")).join("\n");
+    return [
+        "## Active Overrides (supersede plan content)",
+        "",
+        "The following overrides were issued by the user and supersede any conflicting content in plan documents below. Follow these overrides even if they contradict the inlined task plan.",
+        "",
+        entries,
+        "",
+    ].join("\n");
+}
+export async function resolveAllOverrides(basePath) {
+    const overridesPath = resolveGsdRootFile(basePath, "OVERRIDES");
+    const content = await loadFile(overridesPath);
+    if (!content)
+        return;
+    const updated = content.replace(/\*\*Scope:\*\* active/g, "**Scope:** resolved");
+    await saveFile(overridesPath, updated);
+}