genoverse 3.2.0 → 4.0.1

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (217) hide show
  1. package/.eslintrc.js +93 -162
  2. package/.github/workflows/test.yml +9 -10
  3. package/.github/workflows/update-gh-pages.yml +33 -0
  4. package/LICENSE.TXT +2 -2
  5. package/README.md +174 -3
  6. package/{i → assets}/sort_handle.png +0 -0
  7. package/babel.config.js +19 -0
  8. package/dist/129.css +334 -0
  9. package/dist/129.css.map +1 -0
  10. package/dist/129.genoverse.js +2 -0
  11. package/dist/129.genoverse.js.map +1 -0
  12. package/dist/15d98c18221c8bcb2334.ttf +0 -0
  13. package/dist/166.css +2 -0
  14. package/dist/166.genoverse.js +1 -0
  15. package/dist/216.css +20 -0
  16. package/dist/216.css.map +1 -0
  17. package/dist/232.css +114 -0
  18. package/dist/232.css.map +1 -0
  19. package/dist/232.genoverse.js +2 -0
  20. package/dist/232.genoverse.js.map +1 -0
  21. package/dist/2e659e443f3e98569e9f.png +0 -0
  22. package/dist/394.css +114 -0
  23. package/dist/394.css.map +1 -0
  24. package/dist/394.genoverse.js +2 -0
  25. package/dist/394.genoverse.js.map +1 -0
  26. package/dist/469.css +24 -0
  27. package/dist/469.css.map +1 -0
  28. package/dist/469.genoverse.js +2 -0
  29. package/dist/469.genoverse.js.map +1 -0
  30. package/dist/4896d4b04430cc3dfb06.woff2 +0 -0
  31. package/dist/530.css +39 -0
  32. package/dist/530.css.map +1 -0
  33. package/dist/530.genoverse.js +2 -0
  34. package/dist/530.genoverse.js.map +1 -0
  35. package/dist/547.css +469 -0
  36. package/dist/547.css.map +1 -0
  37. package/dist/547.genoverse.js +1 -0
  38. package/dist/729.css +315 -0
  39. package/dist/729.css.map +1 -0
  40. package/dist/79da213423ac0def2058.ttf +0 -0
  41. package/dist/804.genoverse.js +2 -0
  42. package/dist/804.genoverse.js.map +1 -0
  43. package/dist/842.genoverse.js +2 -0
  44. package/dist/842.genoverse.js.map +1 -0
  45. package/dist/893.genoverse.js +2 -0
  46. package/dist/893.genoverse.js.map +1 -0
  47. package/dist/949.css +315 -0
  48. package/dist/949.css.map +1 -0
  49. package/dist/949.genoverse.js +2 -0
  50. package/dist/949.genoverse.js.map +1 -0
  51. package/dist/952.css +315 -0
  52. package/dist/952.css.map +1 -0
  53. package/dist/952.genoverse.js +2 -0
  54. package/dist/952.genoverse.js.map +1 -0
  55. package/dist/d79c2ec96ab9ff1161a2.woff2 +0 -0
  56. package/dist/genoverse.js +2 -0
  57. package/dist/genoverse.js.map +1 -0
  58. package/index.html +13 -14
  59. package/jest.config.js +5 -0
  60. package/jest.setup.js +13 -0
  61. package/package.json +29 -12
  62. package/{css → src/css}/controlPanel.css +0 -0
  63. package/{css → src/css}/fileDrop.css +0 -0
  64. package/src/css/fontawesome.css +3 -0
  65. package/{css → src/css}/fullscreen.css +0 -0
  66. package/{css → src/css}/genoverse.css +1 -1
  67. package/{css → src/css}/karyotype.css +2 -0
  68. package/{css → src/css}/resizer.css +0 -0
  69. package/{css → src/css}/tooltips.css +0 -0
  70. package/{css → src/css}/trackControls.css +0 -0
  71. package/src/js/Genoverse.js +1747 -0
  72. package/{js → src/js}/Track/Controller/Sequence.js +6 -4
  73. package/src/js/Track/Controller/Stranded.js +83 -0
  74. package/{js → src/js}/Track/Controller.js +201 -160
  75. package/src/js/Track/Model/File/BAM.js +47 -0
  76. package/src/js/Track/Model/File/BED.js +122 -0
  77. package/src/js/Track/Model/File/GFF.js +42 -0
  78. package/src/js/Track/Model/File/VCF.js +109 -0
  79. package/src/js/Track/Model/File/WIG.js +82 -0
  80. package/src/js/Track/Model/File.js +36 -0
  81. package/src/js/Track/Model/Gene/Ensembl.js +24 -0
  82. package/{js → src/js}/Track/Model/Gene.js +3 -1
  83. package/src/js/Track/Model/Sequence/Ensembl.js +6 -0
  84. package/{js → src/js}/Track/Model/Sequence/Fasta.js +24 -17
  85. package/{js → src/js}/Track/Model/Sequence.js +10 -7
  86. package/{js → src/js}/Track/Model/SequenceVariation.js +17 -11
  87. package/{js → src/js}/Track/Model/Stranded.js +11 -8
  88. package/src/js/Track/Model/Transcript/Ensembl.js +73 -0
  89. package/{js → src/js}/Track/Model/Transcript.js +3 -1
  90. package/{js → src/js}/Track/Model.js +125 -93
  91. package/{js → src/js}/Track/View/Gene/Ensembl.js +6 -4
  92. package/src/js/Track/View/Gene.js +8 -0
  93. package/{js → src/js}/Track/View/Sequence.js +18 -22
  94. package/src/js/Track/View/SequenceVariation.js +117 -0
  95. package/src/js/Track/View/Transcript/Ensembl.js +17 -0
  96. package/src/js/Track/View/Transcript.js +32 -0
  97. package/{js → src/js}/Track/View.js +200 -159
  98. package/{js → src/js}/Track/library/Chromosome.js +18 -13
  99. package/src/js/Track/library/File/BAM.js +34 -0
  100. package/src/js/Track/library/File/BED.js +27 -0
  101. package/src/js/Track/library/File/BIGBED.js +51 -0
  102. package/src/js/Track/library/File/BIGWIG.js +54 -0
  103. package/src/js/Track/library/File/GFF.js +10 -0
  104. package/{js → src/js}/Track/library/File/VCF.js +29 -22
  105. package/src/js/Track/library/File/WIG.js +8 -0
  106. package/{js → src/js}/Track/library/File.js +4 -2
  107. package/src/js/Track/library/Gene.js +44 -0
  108. package/src/js/Track/library/Graph/Bar.js +263 -0
  109. package/src/js/Track/library/Graph/Line.js +335 -0
  110. package/{js → src/js}/Track/library/Graph.js +137 -114
  111. package/{js → src/js}/Track/library/HighlightRegion.js +118 -93
  112. package/src/js/Track/library/Legend.js +258 -0
  113. package/{js → src/js}/Track/library/Scalebar.js +69 -49
  114. package/{js → src/js}/Track/library/Scaleline.js +29 -27
  115. package/src/js/Track/library/Static.js +82 -0
  116. package/{js → src/js}/Track/library/dbSNP.js +47 -50
  117. package/src/js/Track.js +651 -0
  118. package/{js → src/js}/genomes/grch37.js +52 -52
  119. package/{js → src/js}/genomes/grch38.js +52 -52
  120. package/src/js/lib/BWReader.js +562 -0
  121. package/src/js/lib/VCFReader.js +296 -0
  122. package/src/js/lib/dalliance/bam.js +517 -0
  123. package/src/js/lib/dalliance/bin.js +317 -0
  124. package/src/js/lib/dalliance/jszlib-inflate.js +2159 -0
  125. package/src/js/lib/dalliance/lh3utils.js +105 -0
  126. package/src/js/lib/dalliance/sha1.js +334 -0
  127. package/src/js/lib/import-tracks.js +42 -0
  128. package/{js/lib → src/js/lib/jquery-plugins}/jquery.mousehold.js +0 -0
  129. package/{js/lib → src/js/lib/jquery-plugins}/jquery.mousewheel.js +0 -0
  130. package/{js/lib → src/js/lib/jquery-plugins}/jquery.tipsy.js +0 -0
  131. package/src/js/lib/jquery.js +26 -0
  132. package/src/js/lib/polyfills.js +11 -0
  133. package/src/js/lib/wrap-functions.js +88 -0
  134. package/src/js/plugins/controlPanel.js +388 -0
  135. package/src/js/plugins/fileDrop.js +81 -0
  136. package/src/js/plugins/focusRegion.js +13 -0
  137. package/{js → src/js}/plugins/fullscreen.js +18 -14
  138. package/{js → src/js}/plugins/karyotype.js +51 -45
  139. package/src/js/plugins/resizer.js +52 -0
  140. package/{js → src/js}/plugins/tooltips.js +31 -29
  141. package/src/js/plugins/trackControls.js +159 -0
  142. package/test/View/render-legends.test.js +1 -1
  143. package/test/change-width.test.js +71 -0
  144. package/test/create-and-destroy.test.js +2 -2
  145. package/test/track-ordering.test.js +3 -2
  146. package/test/track_config/config-settings.test.js +1 -1
  147. package/test/utils.js +4 -2
  148. package/webpack.config.js +103 -34
  149. package/css/font-awesome.css +0 -3
  150. package/expanded.html +0 -120
  151. package/fontawesome/css/fontawesome.min.css +0 -5
  152. package/fontawesome/css/regular.min.css +0 -5
  153. package/fontawesome/css/solid.min.css +0 -5
  154. package/fontawesome/webfonts/fa-brands-400.ttf +0 -0
  155. package/fontawesome/webfonts/fa-brands-400.woff +0 -0
  156. package/fontawesome/webfonts/fa-brands-400.woff2 +0 -0
  157. package/fontawesome/webfonts/fa-regular-400.ttf +0 -0
  158. package/fontawesome/webfonts/fa-regular-400.woff +0 -0
  159. package/fontawesome/webfonts/fa-regular-400.woff2 +0 -0
  160. package/fontawesome/webfonts/fa-solid-900.ttf +0 -0
  161. package/fontawesome/webfonts/fa-solid-900.woff +0 -0
  162. package/fontawesome/webfonts/fa-solid-900.woff2 +0 -0
  163. package/help.pdf +0 -0
  164. package/index.js +0 -83
  165. package/js/Genoverse.js +0 -1681
  166. package/js/Track/Controller/Stranded.js +0 -73
  167. package/js/Track/Model/File/BAM.js +0 -44
  168. package/js/Track/Model/File/BED.js +0 -116
  169. package/js/Track/Model/File/GFF.js +0 -40
  170. package/js/Track/Model/File/VCF.js +0 -101
  171. package/js/Track/Model/File/WIG.js +0 -67
  172. package/js/Track/Model/File.js +0 -36
  173. package/js/Track/Model/Gene/Ensembl.js +0 -22
  174. package/js/Track/Model/Sequence/Ensembl.js +0 -4
  175. package/js/Track/Model/Transcript/Ensembl.js +0 -67
  176. package/js/Track/View/Gene.js +0 -6
  177. package/js/Track/View/Sequence/Variation.js +0 -115
  178. package/js/Track/View/Transcript/Ensembl.js +0 -12
  179. package/js/Track/View/Transcript.js +0 -28
  180. package/js/Track/library/File/BAM.js +0 -30
  181. package/js/Track/library/File/BED.js +0 -24
  182. package/js/Track/library/File/BIGBED.js +0 -47
  183. package/js/Track/library/File/BIGWIG.js +0 -52
  184. package/js/Track/library/File/GFF.js +0 -9
  185. package/js/Track/library/File/WIG.js +0 -5
  186. package/js/Track/library/Gene.js +0 -37
  187. package/js/Track/library/Graph/Bar.js +0 -235
  188. package/js/Track/library/Graph/Line.js +0 -296
  189. package/js/Track/library/Legend.js +0 -224
  190. package/js/Track/library/Static.js +0 -78
  191. package/js/Track.js +0 -632
  192. package/js/genoverse.min.js +0 -2
  193. package/js/genoverse.min.js.map +0 -1
  194. package/js/lib/BWReader.js +0 -578
  195. package/js/lib/Base.js +0 -145
  196. package/js/lib/VCFReader.js +0 -286
  197. package/js/lib/dalliance/js/bam.js +0 -494
  198. package/js/lib/dalliance/js/bin.js +0 -185
  199. package/js/lib/dalliance/js/das.js +0 -749
  200. package/js/lib/dalliance/js/utils.js +0 -370
  201. package/js/lib/dalliance-lib.js +0 -3594
  202. package/js/lib/dalliance-lib.min.js +0 -68
  203. package/js/lib/jDataView.js +0 -2
  204. package/js/lib/jParser.js +0 -192
  205. package/js/lib/jquery-ui.js +0 -8
  206. package/js/lib/jquery.js +0 -2
  207. package/js/lib/rtree.js +0 -1
  208. package/js/plugins/controlPanel.js +0 -395
  209. package/js/plugins/fileDrop.js +0 -62
  210. package/js/plugins/focusRegion.js +0 -12
  211. package/js/plugins/resizer.js +0 -45
  212. package/js/plugins/trackControls.js +0 -143
  213. package/utils/expandedTemplate.html +0 -46
  214. package/utils/git-hooks/post-commit +0 -9
  215. package/utils/git-hooks/pre-commit +0 -7
  216. package/utils/git-hooks/setup +0 -6
  217. package/utils/makeExpanded.js +0 -19
package/dist/949.css ADDED
@@ -0,0 +1,315 @@
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+ .tipsy { font-size: 10px; position: absolute; padding: 5px; z-index: 1000; }
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+ .tipsy-inner { background-color: #000; color: #FFF; max-width: 250px; padding: 5px 8px 4px 8px; text-align: center; font-family: Tahoma; font-size: 11px; }
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+
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+ /* Rounded corners */
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+ .tipsy-inner { border-radius: 3px; -moz-border-radius: 3px; -webkit-border-radius: 3px; }
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+
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+ .tipsy-arrow { position: absolute; width: 0; height: 0; line-height: 0; border: 5px dashed #000; }
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+
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+ /* Rules to colour arrows */
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+ .tipsy-arrow-n { border-bottom-color: #000; }
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+ .tipsy-arrow-s { border-top-color: #000; }
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+ .tipsy-arrow-e { border-left-color: #000; }
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+ .tipsy-arrow-w { border-right-color: #000; }
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+
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+ .tipsy-n .tipsy-arrow { top: 0px; left: 50%; margin-left: -5px; border-bottom-style: solid; border-top: none; border-left-color: transparent; border-right-color: transparent; }
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+ .tipsy-nw .tipsy-arrow { top: 0; left: 10px; border-bottom-style: solid; border-top: none; border-left-color: transparent; border-right-color: transparent;}
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+ .tipsy-ne .tipsy-arrow { top: 0; right: 10px; border-bottom-style: solid; border-top: none; border-left-color: transparent; border-right-color: transparent;}
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+ .tipsy-s .tipsy-arrow { bottom: 0; left: 50%; margin-left: -5px; border-top-style: solid; border-bottom: none; border-left-color: transparent; border-right-color: transparent; }
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+ .tipsy-sw .tipsy-arrow { bottom: 0; left: 10px; border-top-style: solid; border-bottom: none; border-left-color: transparent; border-right-color: transparent; }
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+ .tipsy-se .tipsy-arrow { bottom: 0; right: 10px; border-top-style: solid; border-bottom: none; border-left-color: transparent; border-right-color: transparent; }
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+ .tipsy-e .tipsy-arrow { right: 0; top: 50%; margin-top: -5px; border-left-style: solid; border-right: none; border-top-color: transparent; border-bottom-color: transparent; }
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+ .tipsy-w .tipsy-arrow { left: 0; top: 50%; margin-top: -5px; border-right-style: solid; border-left: none; border-top-color: transparent; border-bottom-color: transparent; }
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+
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+ .gv-wrapper-tooltip { position: absolute; left: 50%; top: 60px; }
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+
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+ .genoverse .tooltip { z-index: 1000; }
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+ .gv-control-panel-plugin table.gv {
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+ position: relative;
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+ margin-bottom: 30px;
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+ border-collapse: separate;
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+ }
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+
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+ .gv-control-panel-plugin table.gv td {
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+ padding: 0;
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+ color: white;
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+ vertical-align: top;
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+ }
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+
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+ .gv-control-panel-plugin .gv-panel {
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+ height: 100%;
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+ background-color: #5F8CB0;
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+ border: 1px solid #1C5380;
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+ box-shadow: 0 0 1px rgba(255, 255, 255, 0.4) inset, 0 1px 3px rgba(0, 0, 0, 0.1), -2px 0 2px rgba(0, 0, 0, 0.1);
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+ }
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+
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+ .gv-control-panel-plugin .gv-panel div {
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+ white-space: nowrap;
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+ }
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+
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+ .gv-control-panel-plugin .gv-panel button {
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+ background: none;
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+ border: none;
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+ border-bottom: 1px solid #1C5380;
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+ color: #E2E9EF;
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+ text-shadow: 0 1px 0 rgba(0, 0, 0, 0.75);
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+ width: 30px;
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+ height: 50px;
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+ font-family: inherit;
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+ font-size: 18px;
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+ line-height: 20px;
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+ padding: 2px;
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+ margin: 0;
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+ }
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+
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+ .gv-control-panel-plugin .gv-panel button:only-child {
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+ width: 100%;
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+ }
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+
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+ .gv-control-panel-plugin .gv-panel div.gv-button-set > button:not(:first-child) {
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+ border-left: 1px solid #1C5380;
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+ }
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+
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+ .gv-control-panel-plugin .gv-panel button.gv-button-large {
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+ font-size: 25px;
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+ }
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+
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+ .gv-control-panel-plugin .gv-panel div.gv-button-set:not(:first-child) > button {
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+ box-shadow: 0 1px 1px rgba(255, 255, 255, 0.12) inset;
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+ }
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+
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+ .gv-control-panel-plugin .gv-panel div.gv-button-set:last-child {
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+ box-shadow: 0 1px 0 rgba(255, 255, 255, 0.12);
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+ }
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+
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+ .gv-control-panel-plugin .gv-panel button:hover {
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+ background-color: rgba(255, 255, 255, 0.1);
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+ color: #FFFFFF;
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+ cursor: pointer;
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+ }
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+
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+ .gv-control-panel-plugin .gv-panel button:active,
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+ .gv-control-panel-plugin .gv-panel button.gv-active {
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+ border-top: none;
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+ background-color: rgba(6, 54, 95, 0.35);
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+ box-shadow: 0 0 1px rgba(6, 54, 95, 0.8) inset !important;
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+ }
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+
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+ .gv-control-panel-plugin .gv-panel-right {
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+ background-image: -webkit-linear-gradient(left, #5F8CB0, #4A7496);
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+ background-image: -moz-linear-gradient(left center, #5F8CB0, #4A7496);
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+ border-radius: 0 5px 5px 0;
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+ border-left: 0;
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+ }
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+
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+ .gv-control-panel-plugin .gv-panel-right button.gv-wheel-zoom {
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+ font-weight: bold;
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+ }
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+
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+ .gv-control-panel-plugin .gv-panel-right button.gv-drag-select i {
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+ border: 1px dashed #FFF;
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+ padding: 0 5px;
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+ box-shadow: 0px 0px 1px #FFF inset, 0px 1px 3px rgba(0, 0, 0, 0.1), 2px 2px rgba(0, 0, 0, 0.2);
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+ }
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+
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+ .gv-control-panel-plugin .gv-panel-left {
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+ background-image: -webkit-linear-gradient(right, #5F8CB0, #4A7496);
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+ background-image: -moz-linear-gradient(right center, #5F8CB0, #4A7496);
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+ border-radius: 5px 0 0 5px;
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+ border-right: 0;
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+ }
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+
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+ .gv-control-panel-plugin .gv-panel-left .gv-label-container {
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+ border: 0;
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+ box-shadow: none;
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+ background: none;
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+ }
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+
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+ .gv-control-panel-plugin td.gv-canvas-container {
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+ border: 1px solid #000;
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+ }
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+
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+ .gv-control-panel-plugin .gv-karyotype-container {
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+ border-width: 0 0 1px!important;
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+ }
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+
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+ .gv-control-panel-plugin .gv-canvas-container .gv-wrapper {
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+ border: 0;
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+ }
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+
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+ .gv-control-panel-plugin .gv-tracks-menu {
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+ top: 70px;
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+ }
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+
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+ .gv-control-panel-plugin .gv-tracks-menu .gv-close {
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+ font-size: 20px;
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+ }
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+
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+ .gv-control-panel-plugin .gv-tracks-menu .gv-menu-content {
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+ font-size: 13px;
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+ }
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+
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+ .gv-control-panel-plugin .gv-tracks-menu table {
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+ margin: 0 0 10px;
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+ }
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+
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+ .gv-control-panel-plugin .gv-tracks-menu td {
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+ padding: 5px 10px!important;
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+ vertical-align: top;
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+ width: 50%;
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+ }
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+
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+ .gv-control-panel-plugin .gv-tracks-menu tr:first-child td {
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+ font-weight: bold;
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+ white-space: nowrap;
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+ padding: 5px 30px 5px 10px;
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+ margin-bottom: 5px;
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+ background: rgba(6, 54, 95, 0.35);
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+ line-height: normal;
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+ }
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+
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+ .gv-control-panel-plugin .gv-tracks-menu tr:first-child td:last-child {
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+ border-radius: 0 12px 0 0;
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+ }
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+
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+ .gv-control-panel-plugin .gv-tracks-menu tr td:first-child {
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+ padding-right: 50px!important;
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+ }
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+
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+ .gv-control-panel-plugin .gv-tracks-menu .gv-current-tracks.ui-sortable {
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+ cursor: move;
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+ }
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+
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+ .gv-control-panel-plugin .gv-tracks-menu .gv-current-tracks-instructions {
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+ font-style: italic;
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+ margin-bottom: 10px;
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+ }
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+
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+ .gv-control-panel-plugin .gv-tracks-menu .gv-remove-track,
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+ .gv-control-panel-plugin .gv-tracks-menu .gv-add-track {
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+ font-size: 14px;
191
+ margin: 2px 5px 0 0;
192
+ }
193
+
194
+ .gv-control-panel-plugin .gv-tracks-menu input {
195
+ margin-bottom: 10px;
196
+ width: 200px;
197
+ }
198
+
199
+ .gv-control-panel-plugin .gv-tracks-menu .gv-tracks-menu-reset {
200
+ font-style: italic;
201
+ margin-top: 10px;
202
+ }
203
+
204
+ .gv-control-panel-plugin .gv-tracks-library-category {
205
+ margin-bottom: 10px;
206
+ }
207
+
208
+ .gv-control-panel-plugin .gv-tracks-library-category:last-child {
209
+ margin-bottom: 0px;
210
+ }
211
+
212
+ .gv-control-panel-plugin .gv-tracks-library-category .gv-tracks-library-category-header {
213
+ font-weight: bold;
214
+ }
215
+
216
+ .gv-control-panel-plugin .gv-powered-by {
217
+ position: absolute;
218
+ right: 0;
219
+ bottom: -16px;
220
+ font-size: 10px;
221
+ color: black;
222
+ }
223
+
224
+ .gv-control-panel-plugin .gv-powered-by a {
225
+ font-weight: bold;
226
+ }
227
+
228
+ .gv-karyotype-plugin .gv-karyotype-container {
229
+ height: 50px;
230
+ overflow: hidden;
231
+ box-shadow: inset 0 0 33px -7px rgba(24, 36, 56, 0.97);
232
+ border: 1px solid #000;
233
+ background-color: #FFF;
234
+ }
235
+
236
+ .gv-karyotype-plugin .gv-karyotype-container .gv-wrapper {
237
+ border: 0;
238
+ }
239
+
240
+ .gv-karyotype-plugin .gv-karyotype-container .gv-chromosome {
241
+ margin: 15px;
242
+ position: relative;
243
+ height: calc(100% - 30px);
244
+ }
245
+
246
+ .gv-karyotype-plugin .gv-karyotype-container .gv-image-container {
247
+ box-shadow: 0 0 33px -7px #CCC inset;
248
+ }
249
+
250
+ .gv-karyotype-plugin .gv-karyotype-container .gv-karyotype-viewpoint-wrapper {
251
+ position: relative;
252
+ height: 70%;
253
+ top: -85%;
254
+ margin: 0 15px;
255
+ }
256
+
257
+ .gv-karyotype-plugin .gv-karyotype-container .gv-karyotype-viewpoint {
258
+ background-color: rgba(222, 84, 35, 0.37);
259
+ border: 1px dashed #E6380D;
260
+ box-shadow: 0 0 3px 2px rgba(237, 237, 237, 0.4) inset, 0 0 4px 0 rgba(116, 116, 116, 0.7);
261
+ height: 100%;
262
+ position: absolute;
263
+ z-index: 50;
264
+ cursor: grab;
265
+ cursor: -moz-grab;
266
+ cursor: -webkit-grab;
267
+ }
268
+
269
+ .gv-karyotype-plugin .gv-karyotype-container .ui-resizable-e {
270
+ cursor: e-resize;
271
+ height: 100%;
272
+ right: -5px;
273
+ top: 0;
274
+ width: 7px;
275
+ }
276
+
277
+ .gv-karyotype-plugin .gv-karyotype-container .ui-resizable-w {
278
+ cursor: w-resize;
279
+ height: 100%;
280
+ left: -5px;
281
+ top: 0;
282
+ width: 7px;
283
+ }
284
+
285
+ .gv-karyotype-plugin .gv-karyotype-container .ui-resizable-handle {
286
+ display: block;
287
+ font-size: 0.1px;
288
+ position: absolute;
289
+ }
290
+
291
+ .gv-karyotype-plugin .gv-karyotype-container .gv-chromosome .gv-label-container {
292
+ background: transparent;
293
+ box-shadow: none;
294
+ border: none;
295
+ cursor: default;
296
+ width: auto;
297
+ }
298
+
299
+ .gv-karyotype-plugin .gv-karyotype-container .gv-chromosome .gv-label-container .gv-name {
300
+ color: #000;
301
+ float: none;
302
+ left: 0 !important;
303
+ margin: 0;
304
+ overflow: auto;
305
+ position: relative;
306
+ text-shadow: none;
307
+ width: 100%;
308
+ }
309
+
310
+ .gv-karyotype-plugin .gv-karyotype-container.gv-no-label .gv-wrapper {
311
+ margin-left: 0;
312
+ }
313
+
314
+
315
+ /*# sourceMappingURL=949.css.map*/
@@ -0,0 +1 @@
1
+ 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{ font-size: 10px; position: absolute; padding: 5px; z-index: 1000; }\n.tipsy-inner { background-color: #000; color: #FFF; max-width: 250px; padding: 5px 8px 4px 8px; text-align: center; font-family: Tahoma; font-size: 11px; }\n\n/* Rounded corners */\n.tipsy-inner { border-radius: 3px; -moz-border-radius: 3px; -webkit-border-radius: 3px; }\n\n.tipsy-arrow { position: absolute; width: 0; height: 0; line-height: 0; border: 5px dashed #000; }\n\n/* Rules to colour arrows */\n.tipsy-arrow-n { border-bottom-color: #000; }\n.tipsy-arrow-s { border-top-color: #000; }\n.tipsy-arrow-e { border-left-color: #000; }\n.tipsy-arrow-w { border-right-color: #000; }\n\n.tipsy-n .tipsy-arrow { top: 0px; left: 50%; margin-left: -5px; border-bottom-style: solid; border-top: none; border-left-color: transparent; border-right-color: transparent; }\n.tipsy-nw .tipsy-arrow { top: 0; left: 10px; border-bottom-style: solid; border-top: none; border-left-color: transparent; border-right-color: transparent;}\n.tipsy-ne .tipsy-arrow { top: 0; right: 10px; border-bottom-style: solid; border-top: none; border-left-color: transparent; border-right-color: transparent;}\n.tipsy-s .tipsy-arrow { bottom: 0; left: 50%; margin-left: -5px; border-top-style: solid; border-bottom: none; border-left-color: transparent; border-right-color: transparent; }\n.tipsy-sw .tipsy-arrow { bottom: 0; left: 10px; border-top-style: solid; border-bottom: none; border-left-color: transparent; border-right-color: transparent; }\n.tipsy-se .tipsy-arrow { bottom: 0; right: 10px; border-top-style: solid; border-bottom: none; border-left-color: transparent; border-right-color: transparent; }\n.tipsy-e .tipsy-arrow { right: 0; top: 50%; margin-top: -5px; border-left-style: solid; border-right: none; border-top-color: transparent; border-bottom-color: transparent; }\n.tipsy-w .tipsy-arrow { left: 0; top: 50%; margin-top: -5px; border-right-style: solid; border-left: none; border-top-color: transparent; border-bottom-color: transparent; }\n\n.gv-wrapper-tooltip { position: absolute; left: 50%; top: 60px; }\n\n.genoverse .tooltip { z-index: 1000; }",".gv-control-panel-plugin table.gv {\n position: relative;\n margin-bottom: 30px;\n border-collapse: separate;\n}\n\n.gv-control-panel-plugin table.gv td {\n padding: 0;\n color: white;\n vertical-align: top;\n}\n\n.gv-control-panel-plugin .gv-panel {\n height: 100%;\n background-color: #5F8CB0;\n border: 1px solid #1C5380;\n box-shadow: 0 0 1px rgba(255, 255, 255, 0.4) inset, 0 1px 3px rgba(0, 0, 0, 0.1), -2px 0 2px rgba(0, 0, 0, 0.1);\n}\n\n.gv-control-panel-plugin .gv-panel div {\n white-space: nowrap;\n}\n\n.gv-control-panel-plugin .gv-panel button {\n background: none;\n border: none;\n border-bottom: 1px solid #1C5380;\n color: #E2E9EF;\n text-shadow: 0 1px 0 rgba(0, 0, 0, 0.75);\n width: 30px;\n height: 50px;\n font-family: inherit;\n font-size: 18px;\n line-height: 20px;\n padding: 2px;\n margin: 0;\n}\n\n.gv-control-panel-plugin .gv-panel button:only-child {\n width: 100%;\n}\n\n.gv-control-panel-plugin .gv-panel div.gv-button-set > button:not(:first-child) {\n border-left: 1px solid #1C5380;\n}\n\n.gv-control-panel-plugin .gv-panel button.gv-button-large {\n font-size: 25px;\n}\n\n.gv-control-panel-plugin .gv-panel div.gv-button-set:not(:first-child) > button {\n box-shadow: 0 1px 1px rgba(255, 255, 255, 0.12) inset;\n}\n\n.gv-control-panel-plugin .gv-panel div.gv-button-set:last-child {\n box-shadow: 0 1px 0 rgba(255, 255, 255, 0.12);\n}\n\n.gv-control-panel-plugin .gv-panel button:hover {\n background-color: rgba(255, 255, 255, 0.1);\n color: #FFFFFF;\n cursor: pointer;\n}\n\n.gv-control-panel-plugin .gv-panel button:active,\n.gv-control-panel-plugin .gv-panel button.gv-active {\n border-top: none;\n background-color: rgba(6, 54, 95, 0.35);\n box-shadow: 0 0 1px rgba(6, 54, 95, 0.8) inset !important;\n}\n\n.gv-control-panel-plugin .gv-panel-right {\n background-image: -webkit-linear-gradient(left, #5F8CB0, #4A7496);\n background-image: -moz-linear-gradient(left center, #5F8CB0, #4A7496);\n border-radius: 0 5px 5px 0;\n border-left: 0;\n}\n\n.gv-control-panel-plugin .gv-panel-right button.gv-wheel-zoom {\n font-weight: bold;\n}\n\n.gv-control-panel-plugin .gv-panel-right button.gv-drag-select i {\n border: 1px dashed #FFF;\n padding: 0 5px;\n box-shadow: 0px 0px 1px #FFF inset, 0px 1px 3px rgba(0, 0, 0, 0.1), 2px 2px rgba(0, 0, 0, 0.2);\n}\n\n.gv-control-panel-plugin .gv-panel-left {\n background-image: -webkit-linear-gradient(right, #5F8CB0, #4A7496);\n background-image: -moz-linear-gradient(right center, #5F8CB0, #4A7496);\n border-radius: 5px 0 0 5px;\n border-right: 0;\n}\n\n.gv-control-panel-plugin .gv-panel-left .gv-label-container {\n border: 0;\n box-shadow: none;\n background: none;\n}\n\n.gv-control-panel-plugin td.gv-canvas-container {\n border: 1px solid #000;\n}\n\n.gv-control-panel-plugin .gv-karyotype-container {\n border-width: 0 0 1px!important;\n}\n\n.gv-control-panel-plugin .gv-canvas-container .gv-wrapper {\n border: 0;\n}\n\n.gv-control-panel-plugin .gv-tracks-menu {\n top: 70px;\n}\n\n.gv-control-panel-plugin .gv-tracks-menu .gv-close {\n font-size: 20px;\n}\n\n.gv-control-panel-plugin .gv-tracks-menu .gv-menu-content {\n font-size: 13px;\n}\n\n.gv-control-panel-plugin .gv-tracks-menu table {\n margin: 0 0 10px;\n}\n\n.gv-control-panel-plugin .gv-tracks-menu td {\n padding: 5px 10px!important;\n vertical-align: top;\n width: 50%;\n}\n\n.gv-control-panel-plugin .gv-tracks-menu tr:first-child td {\n font-weight: bold;\n white-space: nowrap;\n padding: 5px 30px 5px 10px;\n margin-bottom: 5px;\n background: rgba(6, 54, 95, 0.35);\n line-height: normal;\n}\n\n.gv-control-panel-plugin .gv-tracks-menu tr:first-child td:last-child {\n border-radius: 0 12px 0 0;\n}\n\n.gv-control-panel-plugin .gv-tracks-menu tr td:first-child {\n padding-right: 50px!important;\n}\n\n.gv-control-panel-plugin .gv-tracks-menu .gv-current-tracks.ui-sortable {\n cursor: move;\n}\n\n.gv-control-panel-plugin .gv-tracks-menu .gv-current-tracks-instructions {\n font-style: italic;\n margin-bottom: 10px;\n}\n\n.gv-control-panel-plugin .gv-tracks-menu .gv-remove-track,\n.gv-control-panel-plugin .gv-tracks-menu .gv-add-track {\n font-size: 14px;\n margin: 2px 5px 0 0;\n}\n\n.gv-control-panel-plugin .gv-tracks-menu input {\n margin-bottom: 10px;\n width: 200px;\n}\n\n.gv-control-panel-plugin .gv-tracks-menu .gv-tracks-menu-reset {\n font-style: italic;\n margin-top: 10px;\n}\n\n.gv-control-panel-plugin .gv-tracks-library-category {\n margin-bottom: 10px;\n}\n\n.gv-control-panel-plugin .gv-tracks-library-category:last-child {\n margin-bottom: 0px;\n}\n\n.gv-control-panel-plugin .gv-tracks-library-category .gv-tracks-library-category-header {\n font-weight: bold;\n}\n\n.gv-control-panel-plugin .gv-powered-by {\n position: absolute;\n right: 0;\n bottom: -16px;\n font-size: 10px;\n color: black;\n}\n\n.gv-control-panel-plugin .gv-powered-by a {\n font-weight: bold;\n}\n","@import url('./tooltips.css');\n\n.gv-karyotype-plugin .gv-karyotype-container {\n height: 50px;\n overflow: hidden;\n box-shadow: inset 0 0 33px -7px rgba(24, 36, 56, 0.97);\n border: 1px solid #000;\n background-color: #FFF;\n}\n\n.gv-karyotype-plugin .gv-karyotype-container .gv-wrapper {\n border: 0;\n}\n\n.gv-karyotype-plugin .gv-karyotype-container .gv-chromosome {\n margin: 15px;\n position: relative;\n height: calc(100% - 30px);\n}\n\n.gv-karyotype-plugin .gv-karyotype-container .gv-image-container {\n box-shadow: 0 0 33px -7px #CCC inset;\n}\n\n.gv-karyotype-plugin .gv-karyotype-container .gv-karyotype-viewpoint-wrapper {\n position: relative;\n height: 70%;\n top: -85%;\n margin: 0 15px;\n}\n\n.gv-karyotype-plugin .gv-karyotype-container .gv-karyotype-viewpoint {\n background-color: rgba(222, 84, 35, 0.37);\n border: 1px dashed #E6380D;\n box-shadow: 0 0 3px 2px rgba(237, 237, 237, 0.4) inset, 0 0 4px 0 rgba(116, 116, 116, 0.7);\n height: 100%;\n position: absolute;\n z-index: 50;\n cursor: grab;\n cursor: -moz-grab;\n cursor: -webkit-grab;\n}\n\n.gv-karyotype-plugin .gv-karyotype-container .ui-resizable-e {\n cursor: e-resize;\n height: 100%;\n right: -5px;\n top: 0;\n width: 7px;\n}\n\n.gv-karyotype-plugin .gv-karyotype-container .ui-resizable-w {\n cursor: w-resize;\n height: 100%;\n left: -5px;\n top: 0;\n width: 7px;\n}\n\n.gv-karyotype-plugin .gv-karyotype-container .ui-resizable-handle {\n display: block;\n font-size: 0.1px;\n position: absolute;\n}\n\n.gv-karyotype-plugin .gv-karyotype-container .gv-chromosome .gv-label-container {\n background: transparent;\n box-shadow: none;\n border: none;\n cursor: default;\n width: auto;\n}\n\n.gv-karyotype-plugin .gv-karyotype-container .gv-chromosome .gv-label-container .gv-name {\n color: #000;\n float: none;\n left: 0 !important;\n margin: 0;\n overflow: auto;\n position: relative;\n text-shadow: none;\n width: 100%;\n}\n\n.gv-karyotype-plugin .gv-karyotype-container.gv-no-label .gv-wrapper {\n margin-left: 0;\n}\n"],"names":[],"sourceRoot":""}
@@ -0,0 +1,2 @@
1
+ "use strict";(self.webpackChunkgenoverse=self.webpackChunkgenoverse||[]).push([[949,729],{3968:function(t,r,e){e.r(r);var i=e(1804);function n(t,r){return function(t){if(Array.isArray(t))return t}(t)||function(t,r){var e=null==t?null:"undefined"!=typeof Symbol&&t[Symbol.iterator]||t["@@iterator"];if(null==e)return;var i,n,a=[],o=!0,s=!1;try{for(e=e.call(t);!(o=(i=e.next()).done)&&(a.push(i.value),!r||a.length!==r);o=!0);}catch(t){s=!0,n=t}finally{try{o||null==e.return||e.return()}finally{if(s)throw n}}return a}(t,r)||function(t,r){if(!t)return;if("string"==typeof t)return a(t,r);var e=Object.prototype.toString.call(t).slice(8,-1);"Object"===e&&t.constructor&&(e=t.constructor.name);if("Map"===e||"Set"===e)return Array.from(t);if("Arguments"===e||/^(?:Ui|I)nt(?:8|16|32)(?:Clamped)?Array$/.test(e))return a(t,r)}(t,r)||function(){throw new TypeError("Invalid attempt to destructure non-iterable instance.\nIn order to be iterable, non-array objects must have a [Symbol.iterator]() method.")}()}function a(t,r){(null==r||r>t.length)&&(r=t.length);for(var e=0,i=new Array(r);e<r;e++)i[e]=t[e];return i}r.default={tooltips:function(){var t=this,r=this.jQuery;function e(t,e,i){var n=t.superContainer.offset();e=e||t.superContainer.find(".gv-tooltip"),i=i||r(this).toggleClass("gv-active").hasClass("gv-active")?"show":"hide",e.each((function(){var e=r(this);e.is(":visible")?e.tipsy(i).data("tipsy").$tip.data({parent:e}).appendTo(t.superContainer).css({marginTop:-n.top,marginLeft:-n.left}):e.data("tipsy").$tip&&e.tipsy("hide")}))}function i(){var i=r();return[[t.labelContainer.find(".gv-handle"),{gravity:"w",fade:!0,trigger:"manual",fallback:"Reorder tracks by dragging this handle"}],[t.container.find(".gv-resizer"),{gravity:"n",fade:!0,trigger:"manual",fallback:"Resize track by dragging this handle"}]].forEach((function(t){var r=n(t,2),e=r[0],a=r[1],o=e.filter(":visible").first();o.hasClass("gv-tooltip")||(e.filter(".gv-tooltip").removeClass("gv-tooltip").tipsy("hide").removeData("tipsy"),o.tipsy(a).addClass("gv-tooltip")),i=i.add(o)})),t.superContainer.find(".tipsy").not((function(){var e=r(this).data("parent");return e&&t.superContainer.find(e).length})).remove(),t.controlPanel.find(".gv-tooltips").hasClass("gv-active")&&e(t,i,"show"),i}this.controls.push({icon:'<i class="fas fa-question-circle"></i>',class:"gv-tooltips",name:"Tooltips",action:e}),this.on("afterInit",(function(){this.superContainer.find(".gv-panel-left .gv-button-set[title]").tipsy({gravity:"w",fade:!0,trigger:"manual"}).addClass("gv-tooltip"),this.superContainer.find(".gv-panel-right .gv-button-set[title]").tipsy({gravity:"e",fade:!0,trigger:"manual"}).addClass("gv-tooltip"),r('<i class="gv-wrapper-tooltip">').prependTo(this.wrapper).tipsy({gravity:"s",fade:!0,trigger:"manual",fallback:"Scroll left and right by dragging with your mouse, click on any feature in any track for more info"}).addClass("gv-tooltip"),i()})),this.on("beforeSetWidth",(function(){this.controlPanel.find(".gv-tooltips.gv-active").trigger("click")})),this.on("afterSortTracks",(function(){i()})),this.on("afterResize","tracks",(function(){i()}))},requires:i.default}}}]);
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'show' : 'hide';\n\n tooltips.each(function () {\n const el = jQuery(this);\n\n if (el.is(':visible')) {\n el.tipsy(action).data('tipsy').$tip.data({ parent: el }).appendTo(browser.superContainer).css({\n marginTop : -offset.top,\n marginLeft : -offset.left,\n });\n } else if (el.data('tipsy').$tip) {\n el.tipsy('hide');\n }\n });\n }\n\n function updateTooltips() {\n let tooltips = jQuery();\n\n [\n [ genoverse.labelContainer.find('.gv-handle'), { gravity: 'w', fade: true, trigger: 'manual', fallback: 'Reorder tracks by dragging this handle' }],\n [ genoverse.container.find('.gv-resizer'), { gravity: 'n', fade: true, trigger: 'manual', fallback: 'Resize track by dragging this handle' }],\n ].forEach(\n ([ selector, options ]) => {\n const el = selector.filter(':visible').first();\n\n if (!el.hasClass('gv-tooltip')) {\n selector.filter('.gv-tooltip').removeClass('gv-tooltip').tipsy('hide').removeData('tipsy');\n el.tipsy(options).addClass('gv-tooltip');\n }\n\n tooltips = tooltips.add(el);\n }\n );\n\n // Remove any tooltips orphaned by the removal of a track\n genoverse.superContainer.find('.tipsy').not(function () {\n const parent = jQuery(this).data('parent');\n\n return parent && genoverse.superContainer.find(parent).length;\n }).remove();\n\n if (genoverse.controlPanel.find('.gv-tooltips').hasClass('gv-active')) {\n toggleTooltips(genoverse, tooltips, 'show');\n }\n\n return tooltips;\n }\n\n this.controls.push({\n icon : '<i class=\"fas fa-question-circle\"></i>',\n class : 'gv-tooltips',\n name : 'Tooltips',\n action : toggleTooltips,\n });\n\n this.on('afterInit', function () {\n this.superContainer.find('.gv-panel-left .gv-button-set[title]').tipsy({ gravity: 'w', fade: true, trigger: 'manual' }).addClass('gv-tooltip');\n this.superContainer.find('.gv-panel-right .gv-button-set[title]').tipsy({ gravity: 'e', fade: true, trigger: 'manual' }).addClass('gv-tooltip');\n\n // In order to force placement of this tooltip to be inside the superContainer boundaries, and just below the karyotype, create a hidden element, positioned where we want the tooltip to appear\n jQuery('<i class=\"gv-wrapper-tooltip\">').prependTo(this.wrapper).tipsy({\n gravity : 's',\n fade : true,\n trigger : 'manual',\n fallback : 'Scroll left and right by dragging with your mouse, click on any feature in any track for more info',\n }).addClass('gv-tooltip');\n\n updateTooltips();\n });\n\n this.on('beforeSetWidth', function () {\n this.controlPanel.find('.gv-tooltips.gv-active').trigger('click');\n });\n\n this.on('afterSortTracks', () => { updateTooltips(); });\n this.on('afterResize', 'tracks', () => { updateTooltips(); });\n};\n\nexport default { tooltips: plugin, requires: controlPanel };\n"],"names":["tooltips","genoverse","this","jQuery","toggleTooltips","browser","action","offset","superContainer","find","toggleClass","hasClass","each","el","is","tipsy","data","$tip","parent","appendTo","css","marginTop","top","marginLeft","left","updateTooltips","labelContainer","gravity","fade","trigger","fallback","container","forEach","selector","options","filter","first","removeClass","removeData","addClass","add","not","length","remove","controlPanel","controls","push","icon","class","name","on","prependTo","wrapper","requires"],"sourceRoot":""}
package/dist/952.css ADDED
@@ -0,0 +1,315 @@
1
+ .gv-control-panel-plugin table.gv {
2
+ position: relative;
3
+ margin-bottom: 30px;
4
+ border-collapse: separate;
5
+ }
6
+
7
+ .gv-control-panel-plugin table.gv td {
8
+ padding: 0;
9
+ color: white;
10
+ vertical-align: top;
11
+ }
12
+
13
+ .gv-control-panel-plugin .gv-panel {
14
+ height: 100%;
15
+ background-color: #5F8CB0;
16
+ border: 1px solid #1C5380;
17
+ box-shadow: 0 0 1px rgba(255, 255, 255, 0.4) inset, 0 1px 3px rgba(0, 0, 0, 0.1), -2px 0 2px rgba(0, 0, 0, 0.1);
18
+ }
19
+
20
+ .gv-control-panel-plugin .gv-panel div {
21
+ white-space: nowrap;
22
+ }
23
+
24
+ .gv-control-panel-plugin .gv-panel button {
25
+ background: none;
26
+ border: none;
27
+ border-bottom: 1px solid #1C5380;
28
+ color: #E2E9EF;
29
+ text-shadow: 0 1px 0 rgba(0, 0, 0, 0.75);
30
+ width: 30px;
31
+ height: 50px;
32
+ font-family: inherit;
33
+ font-size: 18px;
34
+ line-height: 20px;
35
+ padding: 2px;
36
+ margin: 0;
37
+ }
38
+
39
+ .gv-control-panel-plugin .gv-panel button:only-child {
40
+ width: 100%;
41
+ }
42
+
43
+ .gv-control-panel-plugin .gv-panel div.gv-button-set > button:not(:first-child) {
44
+ border-left: 1px solid #1C5380;
45
+ }
46
+
47
+ .gv-control-panel-plugin .gv-panel button.gv-button-large {
48
+ font-size: 25px;
49
+ }
50
+
51
+ .gv-control-panel-plugin .gv-panel div.gv-button-set:not(:first-child) > button {
52
+ box-shadow: 0 1px 1px rgba(255, 255, 255, 0.12) inset;
53
+ }
54
+
55
+ .gv-control-panel-plugin .gv-panel div.gv-button-set:last-child {
56
+ box-shadow: 0 1px 0 rgba(255, 255, 255, 0.12);
57
+ }
58
+
59
+ .gv-control-panel-plugin .gv-panel button:hover {
60
+ background-color: rgba(255, 255, 255, 0.1);
61
+ color: #FFFFFF;
62
+ cursor: pointer;
63
+ }
64
+
65
+ .gv-control-panel-plugin .gv-panel button:active,
66
+ .gv-control-panel-plugin .gv-panel button.gv-active {
67
+ border-top: none;
68
+ background-color: rgba(6, 54, 95, 0.35);
69
+ box-shadow: 0 0 1px rgba(6, 54, 95, 0.8) inset !important;
70
+ }
71
+
72
+ .gv-control-panel-plugin .gv-panel-right {
73
+ background-image: -webkit-linear-gradient(left, #5F8CB0, #4A7496);
74
+ background-image: -moz-linear-gradient(left center, #5F8CB0, #4A7496);
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+ border-radius: 0 5px 5px 0;
76
+ border-left: 0;
77
+ }
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+
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+ .gv-control-panel-plugin .gv-panel-right button.gv-wheel-zoom {
80
+ font-weight: bold;
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+ }
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+
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+ .gv-control-panel-plugin .gv-panel-right button.gv-drag-select i {
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+ border: 1px dashed #FFF;
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+ padding: 0 5px;
86
+ box-shadow: 0px 0px 1px #FFF inset, 0px 1px 3px rgba(0, 0, 0, 0.1), 2px 2px rgba(0, 0, 0, 0.2);
87
+ }
88
+
89
+ .gv-control-panel-plugin .gv-panel-left {
90
+ background-image: -webkit-linear-gradient(right, #5F8CB0, #4A7496);
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+ background-image: -moz-linear-gradient(right center, #5F8CB0, #4A7496);
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+ border-radius: 5px 0 0 5px;
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+ border-right: 0;
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+ }
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+
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+ .gv-control-panel-plugin .gv-panel-left .gv-label-container {
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+ border: 0;
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+ box-shadow: none;
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+ background: none;
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+ }
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+
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+ .gv-control-panel-plugin td.gv-canvas-container {
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+ border: 1px solid #000;
104
+ }
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+
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+ .gv-control-panel-plugin .gv-karyotype-container {
107
+ border-width: 0 0 1px!important;
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+ }
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+
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+ .gv-control-panel-plugin .gv-canvas-container .gv-wrapper {
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+ border: 0;
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+ }
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+
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+ .gv-control-panel-plugin .gv-tracks-menu {
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+ top: 70px;
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+ }
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+
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+ .gv-control-panel-plugin .gv-tracks-menu .gv-close {
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+ font-size: 20px;
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+ }
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+
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+ .gv-control-panel-plugin .gv-tracks-menu .gv-menu-content {
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+ font-size: 13px;
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+ }
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+
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+ .gv-control-panel-plugin .gv-tracks-menu table {
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+ margin: 0 0 10px;
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+ }
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+
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+ .gv-control-panel-plugin .gv-tracks-menu td {
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+ padding: 5px 10px!important;
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+ vertical-align: top;
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+ width: 50%;
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+ }
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+
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+ .gv-control-panel-plugin .gv-tracks-menu tr:first-child td {
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+ font-weight: bold;
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+ white-space: nowrap;
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+ padding: 5px 30px 5px 10px;
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+ margin-bottom: 5px;
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+ background: rgba(6, 54, 95, 0.35);
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+ line-height: normal;
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+ }
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+
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+ .gv-control-panel-plugin .gv-tracks-menu tr:first-child td:last-child {
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+ border-radius: 0 12px 0 0;
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+ }
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+
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+ .gv-control-panel-plugin .gv-tracks-menu tr td:first-child {
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+ padding-right: 50px!important;
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+ }
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+
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+ .gv-control-panel-plugin .gv-tracks-menu .gv-current-tracks.ui-sortable {
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+ cursor: move;
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+ }
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+
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+ .gv-control-panel-plugin .gv-tracks-menu .gv-current-tracks-instructions {
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+ font-style: italic;
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+ margin-bottom: 10px;
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+ }
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+
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+ .gv-control-panel-plugin .gv-tracks-menu .gv-remove-track,
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+ .gv-control-panel-plugin .gv-tracks-menu .gv-add-track {
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+ font-size: 14px;
165
+ margin: 2px 5px 0 0;
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+ }
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+
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+ .gv-control-panel-plugin .gv-tracks-menu input {
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+ margin-bottom: 10px;
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+ width: 200px;
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+ }
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+
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+ .gv-control-panel-plugin .gv-tracks-menu .gv-tracks-menu-reset {
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+ font-style: italic;
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+ margin-top: 10px;
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+ }
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+
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+ .gv-control-panel-plugin .gv-tracks-library-category {
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+ margin-bottom: 10px;
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+ }
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+
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+ .gv-control-panel-plugin .gv-tracks-library-category:last-child {
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+ margin-bottom: 0px;
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+ }
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+
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+ .gv-control-panel-plugin .gv-tracks-library-category .gv-tracks-library-category-header {
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+ font-weight: bold;
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+ }
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+
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+ .gv-control-panel-plugin .gv-powered-by {
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+ position: absolute;
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+ right: 0;
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+ bottom: -16px;
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+ font-size: 10px;
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+ color: black;
196
+ }
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+
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+ .gv-control-panel-plugin .gv-powered-by a {
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+ font-weight: bold;
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+ }
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+
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+ .tipsy { font-size: 10px; position: absolute; padding: 5px; z-index: 1000; }
203
+ .tipsy-inner { background-color: #000; color: #FFF; max-width: 250px; padding: 5px 8px 4px 8px; text-align: center; font-family: Tahoma; font-size: 11px; }
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+
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+ /* Rounded corners */
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+ .tipsy-inner { border-radius: 3px; -moz-border-radius: 3px; -webkit-border-radius: 3px; }
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+
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+ .tipsy-arrow { position: absolute; width: 0; height: 0; line-height: 0; border: 5px dashed #000; }
209
+
210
+ /* Rules to colour arrows */
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+ .tipsy-arrow-n { border-bottom-color: #000; }
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+ .tipsy-arrow-s { border-top-color: #000; }
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+ .tipsy-arrow-e { border-left-color: #000; }
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+ .tipsy-arrow-w { border-right-color: #000; }
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+
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+ .tipsy-n .tipsy-arrow { top: 0px; left: 50%; margin-left: -5px; border-bottom-style: solid; border-top: none; border-left-color: transparent; border-right-color: transparent; }
217
+ .tipsy-nw .tipsy-arrow { top: 0; left: 10px; border-bottom-style: solid; border-top: none; border-left-color: transparent; border-right-color: transparent;}
218
+ .tipsy-ne .tipsy-arrow { top: 0; right: 10px; border-bottom-style: solid; border-top: none; border-left-color: transparent; border-right-color: transparent;}
219
+ .tipsy-s .tipsy-arrow { bottom: 0; left: 50%; margin-left: -5px; border-top-style: solid; border-bottom: none; border-left-color: transparent; border-right-color: transparent; }
220
+ .tipsy-sw .tipsy-arrow { bottom: 0; left: 10px; border-top-style: solid; border-bottom: none; border-left-color: transparent; border-right-color: transparent; }
221
+ .tipsy-se .tipsy-arrow { bottom: 0; right: 10px; border-top-style: solid; border-bottom: none; border-left-color: transparent; border-right-color: transparent; }
222
+ .tipsy-e .tipsy-arrow { right: 0; top: 50%; margin-top: -5px; border-left-style: solid; border-right: none; border-top-color: transparent; border-bottom-color: transparent; }
223
+ .tipsy-w .tipsy-arrow { left: 0; top: 50%; margin-top: -5px; border-right-style: solid; border-left: none; border-top-color: transparent; border-bottom-color: transparent; }
224
+
225
+ .gv-wrapper-tooltip { position: absolute; left: 50%; top: 60px; }
226
+
227
+ .genoverse .tooltip { z-index: 1000; }
228
+ .gv-karyotype-plugin .gv-karyotype-container {
229
+ height: 50px;
230
+ overflow: hidden;
231
+ box-shadow: inset 0 0 33px -7px rgba(24, 36, 56, 0.97);
232
+ border: 1px solid #000;
233
+ background-color: #FFF;
234
+ }
235
+
236
+ .gv-karyotype-plugin .gv-karyotype-container .gv-wrapper {
237
+ border: 0;
238
+ }
239
+
240
+ .gv-karyotype-plugin .gv-karyotype-container .gv-chromosome {
241
+ margin: 15px;
242
+ position: relative;
243
+ height: calc(100% - 30px);
244
+ }
245
+
246
+ .gv-karyotype-plugin .gv-karyotype-container .gv-image-container {
247
+ box-shadow: 0 0 33px -7px #CCC inset;
248
+ }
249
+
250
+ .gv-karyotype-plugin .gv-karyotype-container .gv-karyotype-viewpoint-wrapper {
251
+ position: relative;
252
+ height: 70%;
253
+ top: -85%;
254
+ margin: 0 15px;
255
+ }
256
+
257
+ .gv-karyotype-plugin .gv-karyotype-container .gv-karyotype-viewpoint {
258
+ background-color: rgba(222, 84, 35, 0.37);
259
+ border: 1px dashed #E6380D;
260
+ box-shadow: 0 0 3px 2px rgba(237, 237, 237, 0.4) inset, 0 0 4px 0 rgba(116, 116, 116, 0.7);
261
+ height: 100%;
262
+ position: absolute;
263
+ z-index: 50;
264
+ cursor: grab;
265
+ cursor: -moz-grab;
266
+ cursor: -webkit-grab;
267
+ }
268
+
269
+ .gv-karyotype-plugin .gv-karyotype-container .ui-resizable-e {
270
+ cursor: e-resize;
271
+ height: 100%;
272
+ right: -5px;
273
+ top: 0;
274
+ width: 7px;
275
+ }
276
+
277
+ .gv-karyotype-plugin .gv-karyotype-container .ui-resizable-w {
278
+ cursor: w-resize;
279
+ height: 100%;
280
+ left: -5px;
281
+ top: 0;
282
+ width: 7px;
283
+ }
284
+
285
+ .gv-karyotype-plugin .gv-karyotype-container .ui-resizable-handle {
286
+ display: block;
287
+ font-size: 0.1px;
288
+ position: absolute;
289
+ }
290
+
291
+ .gv-karyotype-plugin .gv-karyotype-container .gv-chromosome .gv-label-container {
292
+ background: transparent;
293
+ box-shadow: none;
294
+ border: none;
295
+ cursor: default;
296
+ width: auto;
297
+ }
298
+
299
+ .gv-karyotype-plugin .gv-karyotype-container .gv-chromosome .gv-label-container .gv-name {
300
+ color: #000;
301
+ float: none;
302
+ left: 0 !important;
303
+ margin: 0;
304
+ overflow: auto;
305
+ position: relative;
306
+ text-shadow: none;
307
+ width: 100%;
308
+ }
309
+
310
+ .gv-karyotype-plugin .gv-karyotype-container.gv-no-label .gv-wrapper {
311
+ margin-left: 0;
312
+ }
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+
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+
315
+ /*# sourceMappingURL=952.css.map*/