genoverse 3.2.0 → 4.0.1
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/.eslintrc.js +93 -162
- package/.github/workflows/test.yml +9 -10
- package/.github/workflows/update-gh-pages.yml +33 -0
- package/LICENSE.TXT +2 -2
- package/README.md +174 -3
- package/{i → assets}/sort_handle.png +0 -0
- package/babel.config.js +19 -0
- package/dist/129.css +334 -0
- package/dist/129.css.map +1 -0
- package/dist/129.genoverse.js +2 -0
- package/dist/129.genoverse.js.map +1 -0
- package/dist/15d98c18221c8bcb2334.ttf +0 -0
- package/dist/166.css +2 -0
- package/dist/166.genoverse.js +1 -0
- package/dist/216.css +20 -0
- package/dist/216.css.map +1 -0
- package/dist/232.css +114 -0
- package/dist/232.css.map +1 -0
- package/dist/232.genoverse.js +2 -0
- package/dist/232.genoverse.js.map +1 -0
- package/dist/2e659e443f3e98569e9f.png +0 -0
- package/dist/394.css +114 -0
- package/dist/394.css.map +1 -0
- package/dist/394.genoverse.js +2 -0
- package/dist/394.genoverse.js.map +1 -0
- package/dist/469.css +24 -0
- package/dist/469.css.map +1 -0
- package/dist/469.genoverse.js +2 -0
- package/dist/469.genoverse.js.map +1 -0
- package/dist/4896d4b04430cc3dfb06.woff2 +0 -0
- package/dist/530.css +39 -0
- package/dist/530.css.map +1 -0
- package/dist/530.genoverse.js +2 -0
- package/dist/530.genoverse.js.map +1 -0
- package/dist/547.css +469 -0
- package/dist/547.css.map +1 -0
- package/dist/547.genoverse.js +1 -0
- package/dist/729.css +315 -0
- package/dist/729.css.map +1 -0
- package/dist/79da213423ac0def2058.ttf +0 -0
- package/dist/804.genoverse.js +2 -0
- package/dist/804.genoverse.js.map +1 -0
- package/dist/842.genoverse.js +2 -0
- package/dist/842.genoverse.js.map +1 -0
- package/dist/893.genoverse.js +2 -0
- package/dist/893.genoverse.js.map +1 -0
- package/dist/949.css +315 -0
- package/dist/949.css.map +1 -0
- package/dist/949.genoverse.js +2 -0
- package/dist/949.genoverse.js.map +1 -0
- package/dist/952.css +315 -0
- package/dist/952.css.map +1 -0
- package/dist/952.genoverse.js +2 -0
- package/dist/952.genoverse.js.map +1 -0
- package/dist/d79c2ec96ab9ff1161a2.woff2 +0 -0
- package/dist/genoverse.js +2 -0
- package/dist/genoverse.js.map +1 -0
- package/index.html +13 -14
- package/jest.config.js +5 -0
- package/jest.setup.js +13 -0
- package/package.json +29 -12
- package/{css → src/css}/controlPanel.css +0 -0
- package/{css → src/css}/fileDrop.css +0 -0
- package/src/css/fontawesome.css +3 -0
- package/{css → src/css}/fullscreen.css +0 -0
- package/{css → src/css}/genoverse.css +1 -1
- package/{css → src/css}/karyotype.css +2 -0
- package/{css → src/css}/resizer.css +0 -0
- package/{css → src/css}/tooltips.css +0 -0
- package/{css → src/css}/trackControls.css +0 -0
- package/src/js/Genoverse.js +1747 -0
- package/{js → src/js}/Track/Controller/Sequence.js +6 -4
- package/src/js/Track/Controller/Stranded.js +83 -0
- package/{js → src/js}/Track/Controller.js +201 -160
- package/src/js/Track/Model/File/BAM.js +47 -0
- package/src/js/Track/Model/File/BED.js +122 -0
- package/src/js/Track/Model/File/GFF.js +42 -0
- package/src/js/Track/Model/File/VCF.js +109 -0
- package/src/js/Track/Model/File/WIG.js +82 -0
- package/src/js/Track/Model/File.js +36 -0
- package/src/js/Track/Model/Gene/Ensembl.js +24 -0
- package/{js → src/js}/Track/Model/Gene.js +3 -1
- package/src/js/Track/Model/Sequence/Ensembl.js +6 -0
- package/{js → src/js}/Track/Model/Sequence/Fasta.js +24 -17
- package/{js → src/js}/Track/Model/Sequence.js +10 -7
- package/{js → src/js}/Track/Model/SequenceVariation.js +17 -11
- package/{js → src/js}/Track/Model/Stranded.js +11 -8
- package/src/js/Track/Model/Transcript/Ensembl.js +73 -0
- package/{js → src/js}/Track/Model/Transcript.js +3 -1
- package/{js → src/js}/Track/Model.js +125 -93
- package/{js → src/js}/Track/View/Gene/Ensembl.js +6 -4
- package/src/js/Track/View/Gene.js +8 -0
- package/{js → src/js}/Track/View/Sequence.js +18 -22
- package/src/js/Track/View/SequenceVariation.js +117 -0
- package/src/js/Track/View/Transcript/Ensembl.js +17 -0
- package/src/js/Track/View/Transcript.js +32 -0
- package/{js → src/js}/Track/View.js +200 -159
- package/{js → src/js}/Track/library/Chromosome.js +18 -13
- package/src/js/Track/library/File/BAM.js +34 -0
- package/src/js/Track/library/File/BED.js +27 -0
- package/src/js/Track/library/File/BIGBED.js +51 -0
- package/src/js/Track/library/File/BIGWIG.js +54 -0
- package/src/js/Track/library/File/GFF.js +10 -0
- package/{js → src/js}/Track/library/File/VCF.js +29 -22
- package/src/js/Track/library/File/WIG.js +8 -0
- package/{js → src/js}/Track/library/File.js +4 -2
- package/src/js/Track/library/Gene.js +44 -0
- package/src/js/Track/library/Graph/Bar.js +263 -0
- package/src/js/Track/library/Graph/Line.js +335 -0
- package/{js → src/js}/Track/library/Graph.js +137 -114
- package/{js → src/js}/Track/library/HighlightRegion.js +118 -93
- package/src/js/Track/library/Legend.js +258 -0
- package/{js → src/js}/Track/library/Scalebar.js +69 -49
- package/{js → src/js}/Track/library/Scaleline.js +29 -27
- package/src/js/Track/library/Static.js +82 -0
- package/{js → src/js}/Track/library/dbSNP.js +47 -50
- package/src/js/Track.js +651 -0
- package/{js → src/js}/genomes/grch37.js +52 -52
- package/{js → src/js}/genomes/grch38.js +52 -52
- package/src/js/lib/BWReader.js +562 -0
- package/src/js/lib/VCFReader.js +296 -0
- package/src/js/lib/dalliance/bam.js +517 -0
- package/src/js/lib/dalliance/bin.js +317 -0
- package/src/js/lib/dalliance/jszlib-inflate.js +2159 -0
- package/src/js/lib/dalliance/lh3utils.js +105 -0
- package/src/js/lib/dalliance/sha1.js +334 -0
- package/src/js/lib/import-tracks.js +42 -0
- package/{js/lib → src/js/lib/jquery-plugins}/jquery.mousehold.js +0 -0
- package/{js/lib → src/js/lib/jquery-plugins}/jquery.mousewheel.js +0 -0
- package/{js/lib → src/js/lib/jquery-plugins}/jquery.tipsy.js +0 -0
- package/src/js/lib/jquery.js +26 -0
- package/src/js/lib/polyfills.js +11 -0
- package/src/js/lib/wrap-functions.js +88 -0
- package/src/js/plugins/controlPanel.js +388 -0
- package/src/js/plugins/fileDrop.js +81 -0
- package/src/js/plugins/focusRegion.js +13 -0
- package/{js → src/js}/plugins/fullscreen.js +18 -14
- package/{js → src/js}/plugins/karyotype.js +51 -45
- package/src/js/plugins/resizer.js +52 -0
- package/{js → src/js}/plugins/tooltips.js +31 -29
- package/src/js/plugins/trackControls.js +159 -0
- package/test/View/render-legends.test.js +1 -1
- package/test/change-width.test.js +71 -0
- package/test/create-and-destroy.test.js +2 -2
- package/test/track-ordering.test.js +3 -2
- package/test/track_config/config-settings.test.js +1 -1
- package/test/utils.js +4 -2
- package/webpack.config.js +103 -34
- package/css/font-awesome.css +0 -3
- package/expanded.html +0 -120
- package/fontawesome/css/fontawesome.min.css +0 -5
- package/fontawesome/css/regular.min.css +0 -5
- package/fontawesome/css/solid.min.css +0 -5
- package/fontawesome/webfonts/fa-brands-400.ttf +0 -0
- package/fontawesome/webfonts/fa-brands-400.woff +0 -0
- package/fontawesome/webfonts/fa-brands-400.woff2 +0 -0
- package/fontawesome/webfonts/fa-regular-400.ttf +0 -0
- package/fontawesome/webfonts/fa-regular-400.woff +0 -0
- package/fontawesome/webfonts/fa-regular-400.woff2 +0 -0
- package/fontawesome/webfonts/fa-solid-900.ttf +0 -0
- package/fontawesome/webfonts/fa-solid-900.woff +0 -0
- package/fontawesome/webfonts/fa-solid-900.woff2 +0 -0
- package/help.pdf +0 -0
- package/index.js +0 -83
- package/js/Genoverse.js +0 -1681
- package/js/Track/Controller/Stranded.js +0 -73
- package/js/Track/Model/File/BAM.js +0 -44
- package/js/Track/Model/File/BED.js +0 -116
- package/js/Track/Model/File/GFF.js +0 -40
- package/js/Track/Model/File/VCF.js +0 -101
- package/js/Track/Model/File/WIG.js +0 -67
- package/js/Track/Model/File.js +0 -36
- package/js/Track/Model/Gene/Ensembl.js +0 -22
- package/js/Track/Model/Sequence/Ensembl.js +0 -4
- package/js/Track/Model/Transcript/Ensembl.js +0 -67
- package/js/Track/View/Gene.js +0 -6
- package/js/Track/View/Sequence/Variation.js +0 -115
- package/js/Track/View/Transcript/Ensembl.js +0 -12
- package/js/Track/View/Transcript.js +0 -28
- package/js/Track/library/File/BAM.js +0 -30
- package/js/Track/library/File/BED.js +0 -24
- package/js/Track/library/File/BIGBED.js +0 -47
- package/js/Track/library/File/BIGWIG.js +0 -52
- package/js/Track/library/File/GFF.js +0 -9
- package/js/Track/library/File/WIG.js +0 -5
- package/js/Track/library/Gene.js +0 -37
- package/js/Track/library/Graph/Bar.js +0 -235
- package/js/Track/library/Graph/Line.js +0 -296
- package/js/Track/library/Legend.js +0 -224
- package/js/Track/library/Static.js +0 -78
- package/js/Track.js +0 -632
- package/js/genoverse.min.js +0 -2
- package/js/genoverse.min.js.map +0 -1
- package/js/lib/BWReader.js +0 -578
- package/js/lib/Base.js +0 -145
- package/js/lib/VCFReader.js +0 -286
- package/js/lib/dalliance/js/bam.js +0 -494
- package/js/lib/dalliance/js/bin.js +0 -185
- package/js/lib/dalliance/js/das.js +0 -749
- package/js/lib/dalliance/js/utils.js +0 -370
- package/js/lib/dalliance-lib.js +0 -3594
- package/js/lib/dalliance-lib.min.js +0 -68
- package/js/lib/jDataView.js +0 -2
- package/js/lib/jParser.js +0 -192
- package/js/lib/jquery-ui.js +0 -8
- package/js/lib/jquery.js +0 -2
- package/js/lib/rtree.js +0 -1
- package/js/plugins/controlPanel.js +0 -395
- package/js/plugins/fileDrop.js +0 -62
- package/js/plugins/focusRegion.js +0 -12
- package/js/plugins/resizer.js +0 -45
- package/js/plugins/trackControls.js +0 -143
- package/utils/expandedTemplate.html +0 -46
- package/utils/git-hooks/post-commit +0 -9
- package/utils/git-hooks/pre-commit +0 -7
- package/utils/git-hooks/setup +0 -6
- package/utils/makeExpanded.js +0 -19
|
@@ -1,4 +1,4 @@
|
|
|
1
|
-
|
|
1
|
+
export default {
|
|
2
2
|
'1': {
|
|
3
3
|
'size' : 249250621,
|
|
4
4
|
'bands' : [
|
|
@@ -64,8 +64,8 @@ Genoverse.Genomes.grch37 = {
|
|
|
64
64
|
{ 'id': 'q42.2', 'start': 230700001, 'end': 234700000, 'type': 'gpos50' },
|
|
65
65
|
{ 'id': 'q42.3', 'start': 234700001, 'end': 236600000, 'type': 'gneg' },
|
|
66
66
|
{ 'id': 'q43', 'start': 236600001, 'end': 243700000, 'type': 'gpos75' },
|
|
67
|
-
{ 'id': 'q44', 'start': 243700001, 'end': 249250621, 'type': 'gneg' }
|
|
68
|
-
]
|
|
67
|
+
{ 'id': 'q44', 'start': 243700001, 'end': 249250621, 'type': 'gneg' },
|
|
68
|
+
],
|
|
69
69
|
},
|
|
70
70
|
'2': {
|
|
71
71
|
'size' : 243199373,
|
|
@@ -131,8 +131,8 @@ Genoverse.Genomes.grch37 = {
|
|
|
131
131
|
{ 'id': 'q36.3', 'start': 226100001, 'end': 231000000, 'type': 'gpos100' },
|
|
132
132
|
{ 'id': 'q37.1', 'start': 231000001, 'end': 235600000, 'type': 'gneg' },
|
|
133
133
|
{ 'id': 'q37.2', 'start': 235600001, 'end': 237300000, 'type': 'gpos50' },
|
|
134
|
-
{ 'id': 'q37.3', 'start': 237300001, 'end': 243199373, 'type': 'gneg' }
|
|
135
|
-
]
|
|
134
|
+
{ 'id': 'q37.3', 'start': 237300001, 'end': 243199373, 'type': 'gneg' },
|
|
135
|
+
],
|
|
136
136
|
},
|
|
137
137
|
'3': {
|
|
138
138
|
'size' : 198022430,
|
|
@@ -198,8 +198,8 @@ Genoverse.Genomes.grch37 = {
|
|
|
198
198
|
{ 'id': 'q27.2', 'start': 184500001, 'end': 186000000, 'type': 'gpos25' },
|
|
199
199
|
{ 'id': 'q27.3', 'start': 186000001, 'end': 187900000, 'type': 'gneg' },
|
|
200
200
|
{ 'id': 'q28', 'start': 187900001, 'end': 192300000, 'type': 'gpos75' },
|
|
201
|
-
{ 'id': 'q29', 'start': 192300001, 'end': 198022430, 'type': 'gneg' }
|
|
202
|
-
]
|
|
201
|
+
{ 'id': 'q29', 'start': 192300001, 'end': 198022430, 'type': 'gneg' },
|
|
202
|
+
],
|
|
203
203
|
},
|
|
204
204
|
'4': {
|
|
205
205
|
'size' : 191154276,
|
|
@@ -250,8 +250,8 @@ Genoverse.Genomes.grch37 = {
|
|
|
250
250
|
{ 'id': 'q34.2', 'start': 176300001, 'end': 177500000, 'type': 'gneg' },
|
|
251
251
|
{ 'id': 'q34.3', 'start': 177500001, 'end': 183200000, 'type': 'gpos100' },
|
|
252
252
|
{ 'id': 'q35.1', 'start': 183200001, 'end': 187100000, 'type': 'gneg' },
|
|
253
|
-
{ 'id': 'q35.2', 'start': 187100001, 'end': 191154276, 'type': 'gpos25' }
|
|
254
|
-
]
|
|
253
|
+
{ 'id': 'q35.2', 'start': 187100001, 'end': 191154276, 'type': 'gpos25' },
|
|
254
|
+
],
|
|
255
255
|
},
|
|
256
256
|
'5': {
|
|
257
257
|
'size' : 180915260,
|
|
@@ -300,8 +300,8 @@ Genoverse.Genomes.grch37 = {
|
|
|
300
300
|
{ 'id': 'q34', 'start': 159900001, 'end': 168500000, 'type': 'gpos100' },
|
|
301
301
|
{ 'id': 'q35.1', 'start': 168500001, 'end': 172800000, 'type': 'gneg' },
|
|
302
302
|
{ 'id': 'q35.2', 'start': 172800001, 'end': 176600000, 'type': 'gpos25' },
|
|
303
|
-
{ 'id': 'q35.3', 'start': 176600001, 'end': 180915260, 'type': 'gneg' }
|
|
304
|
-
]
|
|
303
|
+
{ 'id': 'q35.3', 'start': 176600001, 'end': 180915260, 'type': 'gneg' },
|
|
304
|
+
],
|
|
305
305
|
},
|
|
306
306
|
'6': {
|
|
307
307
|
'size' : 171115067,
|
|
@@ -353,8 +353,8 @@ Genoverse.Genomes.grch37 = {
|
|
|
353
353
|
{ 'id': 'q25.2', 'start': 152500001, 'end': 155500000, 'type': 'gpos50' },
|
|
354
354
|
{ 'id': 'q25.3', 'start': 155500001, 'end': 161000000, 'type': 'gneg' },
|
|
355
355
|
{ 'id': 'q26', 'start': 161000001, 'end': 164500000, 'type': 'gpos50' },
|
|
356
|
-
{ 'id': 'q27', 'start': 164500001, 'end': 171115067, 'type': 'gneg' }
|
|
357
|
-
]
|
|
356
|
+
{ 'id': 'q27', 'start': 164500001, 'end': 171115067, 'type': 'gneg' },
|
|
357
|
+
],
|
|
358
358
|
},
|
|
359
359
|
'7': {
|
|
360
360
|
'size' : 159138663,
|
|
@@ -402,8 +402,8 @@ Genoverse.Genomes.grch37 = {
|
|
|
402
402
|
{ 'id': 'q35', 'start': 143100001, 'end': 147900000, 'type': 'gpos75' },
|
|
403
403
|
{ 'id': 'q36.1', 'start': 147900001, 'end': 152600000, 'type': 'gneg' },
|
|
404
404
|
{ 'id': 'q36.2', 'start': 152600001, 'end': 155100000, 'type': 'gpos25' },
|
|
405
|
-
{ 'id': 'q36.3', 'start': 155100001, 'end': 159138663, 'type': 'gneg' }
|
|
406
|
-
]
|
|
405
|
+
{ 'id': 'q36.3', 'start': 155100001, 'end': 159138663, 'type': 'gneg' },
|
|
406
|
+
],
|
|
407
407
|
},
|
|
408
408
|
'8': {
|
|
409
409
|
'size' : 146364022,
|
|
@@ -447,8 +447,8 @@ Genoverse.Genomes.grch37 = {
|
|
|
447
447
|
{ 'id': 'q24.21', 'start': 127300001, 'end': 131500000, 'type': 'gpos50' },
|
|
448
448
|
{ 'id': 'q24.22', 'start': 131500001, 'end': 136400000, 'type': 'gneg' },
|
|
449
449
|
{ 'id': 'q24.23', 'start': 136400001, 'end': 139900000, 'type': 'gpos75' },
|
|
450
|
-
{ 'id': 'q24.3', 'start': 139900001, 'end': 146364022, 'type': 'gneg' }
|
|
451
|
-
]
|
|
450
|
+
{ 'id': 'q24.3', 'start': 139900001, 'end': 146364022, 'type': 'gneg' },
|
|
451
|
+
],
|
|
452
452
|
},
|
|
453
453
|
'9': {
|
|
454
454
|
'size' : 141213431,
|
|
@@ -495,8 +495,8 @@ Genoverse.Genomes.grch37 = {
|
|
|
495
495
|
{ 'id': 'q34.12', 'start': 133500001, 'end': 134000000, 'type': 'gpos25' },
|
|
496
496
|
{ 'id': 'q34.13', 'start': 134000001, 'end': 135900000, 'type': 'gneg' },
|
|
497
497
|
{ 'id': 'q34.2', 'start': 135900001, 'end': 137400000, 'type': 'gpos25' },
|
|
498
|
-
{ 'id': 'q34.3', 'start': 137400001, 'end': 141213431, 'type': 'gneg' }
|
|
499
|
-
]
|
|
498
|
+
{ 'id': 'q34.3', 'start': 137400001, 'end': 141213431, 'type': 'gneg' },
|
|
499
|
+
],
|
|
500
500
|
},
|
|
501
501
|
'10': {
|
|
502
502
|
'size' : 135534747,
|
|
@@ -542,8 +542,8 @@ Genoverse.Genomes.grch37 = {
|
|
|
542
542
|
{ 'id': 'q26.12', 'start': 121700001, 'end': 123100000, 'type': 'gpos50' },
|
|
543
543
|
{ 'id': 'q26.13', 'start': 123100001, 'end': 127500000, 'type': 'gneg' },
|
|
544
544
|
{ 'id': 'q26.2', 'start': 127500001, 'end': 130600000, 'type': 'gpos50' },
|
|
545
|
-
{ 'id': 'q26.3', 'start': 130600001, 'end': 135534747, 'type': 'gneg' }
|
|
546
|
-
]
|
|
545
|
+
{ 'id': 'q26.3', 'start': 130600001, 'end': 135534747, 'type': 'gneg' },
|
|
546
|
+
],
|
|
547
547
|
},
|
|
548
548
|
'11': {
|
|
549
549
|
'size' : 135006516,
|
|
@@ -583,8 +583,8 @@ Genoverse.Genomes.grch37 = {
|
|
|
583
583
|
{ 'id': 'q24.1', 'start': 121200001, 'end': 123900000, 'type': 'gpos50' },
|
|
584
584
|
{ 'id': 'q24.2', 'start': 123900001, 'end': 127800000, 'type': 'gneg' },
|
|
585
585
|
{ 'id': 'q24.3', 'start': 127800001, 'end': 130800000, 'type': 'gpos50' },
|
|
586
|
-
{ 'id': 'q25', 'start': 130800001, 'end': 135006516, 'type': 'gneg' }
|
|
587
|
-
]
|
|
586
|
+
{ 'id': 'q25', 'start': 130800001, 'end': 135006516, 'type': 'gneg' },
|
|
587
|
+
],
|
|
588
588
|
},
|
|
589
589
|
'12': {
|
|
590
590
|
'size' : 133851895,
|
|
@@ -629,8 +629,8 @@ Genoverse.Genomes.grch37 = {
|
|
|
629
629
|
{ 'id': 'q24.23', 'start': 118100001, 'end': 120700000, 'type': 'gpos50' },
|
|
630
630
|
{ 'id': 'q24.31', 'start': 120700001, 'end': 125900000, 'type': 'gneg' },
|
|
631
631
|
{ 'id': 'q24.32', 'start': 125900001, 'end': 129300000, 'type': 'gpos50' },
|
|
632
|
-
{ 'id': 'q24.33', 'start': 129300001, 'end': 133851895, 'type': 'gneg' }
|
|
633
|
-
]
|
|
632
|
+
{ 'id': 'q24.33', 'start': 129300001, 'end': 133851895, 'type': 'gneg' },
|
|
633
|
+
],
|
|
634
634
|
},
|
|
635
635
|
'13': {
|
|
636
636
|
'size' : 115169878,
|
|
@@ -670,8 +670,8 @@ Genoverse.Genomes.grch37 = {
|
|
|
670
670
|
{ 'id': 'q33.1', 'start': 101700001, 'end': 104800000, 'type': 'gpos100' },
|
|
671
671
|
{ 'id': 'q33.2', 'start': 104800001, 'end': 107000000, 'type': 'gneg' },
|
|
672
672
|
{ 'id': 'q33.3', 'start': 107000001, 'end': 110300000, 'type': 'gpos100' },
|
|
673
|
-
{ 'id': 'q34', 'start': 110300001, 'end': 115169878, 'type': 'gneg' }
|
|
674
|
-
]
|
|
673
|
+
{ 'id': 'q34', 'start': 110300001, 'end': 115169878, 'type': 'gneg' },
|
|
674
|
+
],
|
|
675
675
|
},
|
|
676
676
|
'14': {
|
|
677
677
|
'size' : 107349540,
|
|
@@ -707,8 +707,8 @@ Genoverse.Genomes.grch37 = {
|
|
|
707
707
|
{ 'id': 'q32.2', 'start': 96300001, 'end': 101400000, 'type': 'gpos50' },
|
|
708
708
|
{ 'id': 'q32.31', 'start': 101400001, 'end': 103200000, 'type': 'gneg' },
|
|
709
709
|
{ 'id': 'q32.32', 'start': 103200001, 'end': 104000000, 'type': 'gpos50' },
|
|
710
|
-
{ 'id': 'q32.33', 'start': 104000001, 'end': 107349540, 'type': 'gneg' }
|
|
711
|
-
]
|
|
710
|
+
{ 'id': 'q32.33', 'start': 104000001, 'end': 107349540, 'type': 'gneg' },
|
|
711
|
+
],
|
|
712
712
|
},
|
|
713
713
|
'15': {
|
|
714
714
|
'size' : 102531392,
|
|
@@ -744,8 +744,8 @@ Genoverse.Genomes.grch37 = {
|
|
|
744
744
|
{ 'id': 'q25.3', 'start': 85200001, 'end': 89100000, 'type': 'gpos50' },
|
|
745
745
|
{ 'id': 'q26.1', 'start': 89100001, 'end': 94300000, 'type': 'gneg' },
|
|
746
746
|
{ 'id': 'q26.2', 'start': 94300001, 'end': 98500000, 'type': 'gpos50' },
|
|
747
|
-
{ 'id': 'q26.3', 'start': 98500001, 'end': 102531392, 'type': 'gneg' }
|
|
748
|
-
]
|
|
747
|
+
{ 'id': 'q26.3', 'start': 98500001, 'end': 102531392, 'type': 'gneg' },
|
|
748
|
+
],
|
|
749
749
|
},
|
|
750
750
|
'16': {
|
|
751
751
|
'size' : 90354753,
|
|
@@ -774,8 +774,8 @@ Genoverse.Genomes.grch37 = {
|
|
|
774
774
|
{ 'id': 'q23.3', 'start': 81700001, 'end': 84200000, 'type': 'gpos50' },
|
|
775
775
|
{ 'id': 'q24.1', 'start': 84200001, 'end': 87100000, 'type': 'gneg' },
|
|
776
776
|
{ 'id': 'q24.2', 'start': 87100001, 'end': 88700000, 'type': 'gpos25' },
|
|
777
|
-
{ 'id': 'q24.3', 'start': 88700001, 'end': 90354753, 'type': 'gneg' }
|
|
778
|
-
]
|
|
777
|
+
{ 'id': 'q24.3', 'start': 88700001, 'end': 90354753, 'type': 'gneg' },
|
|
778
|
+
],
|
|
779
779
|
},
|
|
780
780
|
'17': {
|
|
781
781
|
'size' : 81195210,
|
|
@@ -803,8 +803,8 @@ Genoverse.Genomes.grch37 = {
|
|
|
803
803
|
{ 'id': 'q24.3', 'start': 67100001, 'end': 70900000, 'type': 'gpos75' },
|
|
804
804
|
{ 'id': 'q25.1', 'start': 70900001, 'end': 74800000, 'type': 'gneg' },
|
|
805
805
|
{ 'id': 'q25.2', 'start': 74800001, 'end': 75300000, 'type': 'gpos25' },
|
|
806
|
-
{ 'id': 'q25.3', 'start': 75300001, 'end': 81195210, 'type': 'gneg' }
|
|
807
|
-
]
|
|
806
|
+
{ 'id': 'q25.3', 'start': 75300001, 'end': 81195210, 'type': 'gneg' },
|
|
807
|
+
],
|
|
808
808
|
},
|
|
809
809
|
'18': {
|
|
810
810
|
'size' : 78077248,
|
|
@@ -828,8 +828,8 @@ Genoverse.Genomes.grch37 = {
|
|
|
828
828
|
{ 'id': 'q22.1', 'start': 61600001, 'end': 66800000, 'type': 'gpos100' },
|
|
829
829
|
{ 'id': 'q22.2', 'start': 66800001, 'end': 68700000, 'type': 'gneg' },
|
|
830
830
|
{ 'id': 'q22.3', 'start': 68700001, 'end': 73100000, 'type': 'gpos25' },
|
|
831
|
-
{ 'id': 'q23', 'start': 73100001, 'end': 78077248, 'type': 'gneg' }
|
|
832
|
-
]
|
|
831
|
+
{ 'id': 'q23', 'start': 73100001, 'end': 78077248, 'type': 'gneg' },
|
|
832
|
+
],
|
|
833
833
|
},
|
|
834
834
|
'19': {
|
|
835
835
|
'size' : 59128983,
|
|
@@ -852,8 +852,8 @@ Genoverse.Genomes.grch37 = {
|
|
|
852
852
|
{ 'id': 'q13.33', 'start': 48000001, 'end': 51400000, 'type': 'gneg' },
|
|
853
853
|
{ 'id': 'q13.41', 'start': 51400001, 'end': 53600000, 'type': 'gpos25' },
|
|
854
854
|
{ 'id': 'q13.42', 'start': 53600001, 'end': 56300000, 'type': 'gneg' },
|
|
855
|
-
{ 'id': 'q13.43', 'start': 56300001, 'end': 59128983, 'type': 'gpos25' }
|
|
856
|
-
]
|
|
855
|
+
{ 'id': 'q13.43', 'start': 56300001, 'end': 59128983, 'type': 'gpos25' },
|
|
856
|
+
],
|
|
857
857
|
},
|
|
858
858
|
'20': {
|
|
859
859
|
'size' : 63025520,
|
|
@@ -877,8 +877,8 @@ Genoverse.Genomes.grch37 = {
|
|
|
877
877
|
{ 'id': 'q13.2', 'start': 49800001, 'end': 55000000, 'type': 'gpos75' },
|
|
878
878
|
{ 'id': 'q13.31', 'start': 55000001, 'end': 56500000, 'type': 'gneg' },
|
|
879
879
|
{ 'id': 'q13.32', 'start': 56500001, 'end': 58400000, 'type': 'gpos50' },
|
|
880
|
-
{ 'id': 'q13.33', 'start': 58400001, 'end': 63025520, 'type': 'gneg' }
|
|
881
|
-
]
|
|
880
|
+
{ 'id': 'q13.33', 'start': 58400001, 'end': 63025520, 'type': 'gneg' },
|
|
881
|
+
],
|
|
882
882
|
},
|
|
883
883
|
'21': {
|
|
884
884
|
'size' : 48129895,
|
|
@@ -896,8 +896,8 @@ Genoverse.Genomes.grch37 = {
|
|
|
896
896
|
{ 'id': 'q22.12', 'start': 35800001, 'end': 37800000, 'type': 'gpos50' },
|
|
897
897
|
{ 'id': 'q22.13', 'start': 37800001, 'end': 39700000, 'type': 'gneg' },
|
|
898
898
|
{ 'id': 'q22.2', 'start': 39700001, 'end': 42600000, 'type': 'gpos50' },
|
|
899
|
-
{ 'id': 'q22.3', 'start': 42600001, 'end': 48129895, 'type': 'gneg' }
|
|
900
|
-
]
|
|
899
|
+
{ 'id': 'q22.3', 'start': 42600001, 'end': 48129895, 'type': 'gneg' },
|
|
900
|
+
],
|
|
901
901
|
},
|
|
902
902
|
'22': {
|
|
903
903
|
'size' : 51304566,
|
|
@@ -917,8 +917,8 @@ Genoverse.Genomes.grch37 = {
|
|
|
917
917
|
{ 'id': 'q13.2', 'start': 41000001, 'end': 44200000, 'type': 'gpos50' },
|
|
918
918
|
{ 'id': 'q13.31', 'start': 44200001, 'end': 48400000, 'type': 'gneg' },
|
|
919
919
|
{ 'id': 'q13.32', 'start': 48400001, 'end': 49400000, 'type': 'gpos50' },
|
|
920
|
-
{ 'id': 'q13.33', 'start': 49400001, 'end': 51304566, 'type': 'gneg' }
|
|
921
|
-
]
|
|
920
|
+
{ 'id': 'q13.33', 'start': 49400001, 'end': 51304566, 'type': 'gneg' },
|
|
921
|
+
],
|
|
922
922
|
},
|
|
923
923
|
'X': {
|
|
924
924
|
'size' : 155270560,
|
|
@@ -962,8 +962,8 @@ Genoverse.Genomes.grch37 = {
|
|
|
962
962
|
{ 'id': 'q27.1', 'start': 138000001, 'end': 140300000, 'type': 'gpos75' },
|
|
963
963
|
{ 'id': 'q27.2', 'start': 140300001, 'end': 142100000, 'type': 'gneg' },
|
|
964
964
|
{ 'id': 'q27.3', 'start': 142100001, 'end': 147100000, 'type': 'gpos100' },
|
|
965
|
-
{ 'id': 'q28', 'start': 147100001, 'end': 155270560, 'type': 'gneg' }
|
|
966
|
-
]
|
|
965
|
+
{ 'id': 'q28', 'start': 147100001, 'end': 155270560, 'type': 'gneg' },
|
|
966
|
+
],
|
|
967
967
|
},
|
|
968
968
|
'Y': {
|
|
969
969
|
'size' : 59373566,
|
|
@@ -978,13 +978,13 @@ Genoverse.Genomes.grch37 = {
|
|
|
978
978
|
{ 'id': 'q11.222', 'start': 19800001, 'end': 22100000, 'type': 'gneg' },
|
|
979
979
|
{ 'id': 'q11.223', 'start': 22100001, 'end': 26200000, 'type': 'gpos50' },
|
|
980
980
|
{ 'id': 'q11.23', 'start': 26200001, 'end': 28800000, 'type': 'gneg' },
|
|
981
|
-
{ 'id': 'q12', 'start': 28800001, 'end': 59373566, 'type': 'gvar' }
|
|
982
|
-
]
|
|
981
|
+
{ 'id': 'q12', 'start': 28800001, 'end': 59373566, 'type': 'gvar' },
|
|
982
|
+
],
|
|
983
983
|
},
|
|
984
984
|
'MT': {
|
|
985
985
|
'size' : 16569,
|
|
986
986
|
'bands' : [
|
|
987
|
-
{ 'start': 1, 'end': 16569 }
|
|
988
|
-
]
|
|
989
|
-
}
|
|
987
|
+
{ 'start': 1, 'end': 16569 },
|
|
988
|
+
],
|
|
989
|
+
},
|
|
990
990
|
};
|
|
@@ -1,4 +1,4 @@
|
|
|
1
|
-
|
|
1
|
+
export default {
|
|
2
2
|
'1': {
|
|
3
3
|
'size' : 248956422,
|
|
4
4
|
'bands' : [
|
|
@@ -64,8 +64,8 @@ Genoverse.Genomes.grch38 = {
|
|
|
64
64
|
{ 'id': 'q42.2', 'start': 230500001, 'end': 234600000, 'type': 'gpos50' },
|
|
65
65
|
{ 'id': 'q42.3', 'start': 234600001, 'end': 236400000, 'type': 'gneg' },
|
|
66
66
|
{ 'id': 'q43', 'start': 236400001, 'end': 243500000, 'type': 'gpos75' },
|
|
67
|
-
{ 'id': 'q44', 'start': 243500001, 'end': 248956422, 'type': 'gneg' }
|
|
68
|
-
]
|
|
67
|
+
{ 'id': 'q44', 'start': 243500001, 'end': 248956422, 'type': 'gneg' },
|
|
68
|
+
],
|
|
69
69
|
},
|
|
70
70
|
'2': {
|
|
71
71
|
'size' : 242193529,
|
|
@@ -131,8 +131,8 @@ Genoverse.Genomes.grch38 = {
|
|
|
131
131
|
{ 'id': 'q36.3', 'start': 225200001, 'end': 230100000, 'type': 'gpos100' },
|
|
132
132
|
{ 'id': 'q37.1', 'start': 230100001, 'end': 234700000, 'type': 'gneg' },
|
|
133
133
|
{ 'id': 'q37.2', 'start': 234700001, 'end': 236400000, 'type': 'gpos50' },
|
|
134
|
-
{ 'id': 'q37.3', 'start': 236400001, 'end': 242193529, 'type': 'gneg' }
|
|
135
|
-
]
|
|
134
|
+
{ 'id': 'q37.3', 'start': 236400001, 'end': 242193529, 'type': 'gneg' },
|
|
135
|
+
],
|
|
136
136
|
},
|
|
137
137
|
'3': {
|
|
138
138
|
'size' : 198295559,
|
|
@@ -198,8 +198,8 @@ Genoverse.Genomes.grch38 = {
|
|
|
198
198
|
{ 'id': 'q27.2', 'start': 184800001, 'end': 186300000, 'type': 'gpos25' },
|
|
199
199
|
{ 'id': 'q27.3', 'start': 186300001, 'end': 188200000, 'type': 'gneg' },
|
|
200
200
|
{ 'id': 'q28', 'start': 188200001, 'end': 192600000, 'type': 'gpos75' },
|
|
201
|
-
{ 'id': 'q29', 'start': 192600001, 'end': 198295559, 'type': 'gneg' }
|
|
202
|
-
]
|
|
201
|
+
{ 'id': 'q29', 'start': 192600001, 'end': 198295559, 'type': 'gneg' },
|
|
202
|
+
],
|
|
203
203
|
},
|
|
204
204
|
'4': {
|
|
205
205
|
'size' : 190214555,
|
|
@@ -250,8 +250,8 @@ Genoverse.Genomes.grch38 = {
|
|
|
250
250
|
{ 'id': 'q34.2', 'start': 175400001, 'end': 176600000, 'type': 'gneg' },
|
|
251
251
|
{ 'id': 'q34.3', 'start': 176600001, 'end': 182300000, 'type': 'gpos100' },
|
|
252
252
|
{ 'id': 'q35.1', 'start': 182300001, 'end': 186200000, 'type': 'gneg' },
|
|
253
|
-
{ 'id': 'q35.2', 'start': 186200001, 'end': 190214555, 'type': 'gpos25' }
|
|
254
|
-
]
|
|
253
|
+
{ 'id': 'q35.2', 'start': 186200001, 'end': 190214555, 'type': 'gpos25' },
|
|
254
|
+
],
|
|
255
255
|
},
|
|
256
256
|
'5': {
|
|
257
257
|
'size' : 181538259,
|
|
@@ -300,8 +300,8 @@ Genoverse.Genomes.grch38 = {
|
|
|
300
300
|
{ 'id': 'q34', 'start': 160500001, 'end': 169000000, 'type': 'gpos100' },
|
|
301
301
|
{ 'id': 'q35.1', 'start': 169000001, 'end': 173300000, 'type': 'gneg' },
|
|
302
302
|
{ 'id': 'q35.2', 'start': 173300001, 'end': 177100000, 'type': 'gpos25' },
|
|
303
|
-
{ 'id': 'q35.3', 'start': 177100001, 'end': 181538259, 'type': 'gneg' }
|
|
304
|
-
]
|
|
303
|
+
{ 'id': 'q35.3', 'start': 177100001, 'end': 181538259, 'type': 'gneg' },
|
|
304
|
+
],
|
|
305
305
|
},
|
|
306
306
|
'6': {
|
|
307
307
|
'size' : 170805979,
|
|
@@ -353,8 +353,8 @@ Genoverse.Genomes.grch38 = {
|
|
|
353
353
|
{ 'id': 'q25.2', 'start': 152100001, 'end': 155200000, 'type': 'gpos50' },
|
|
354
354
|
{ 'id': 'q25.3', 'start': 155200001, 'end': 160600000, 'type': 'gneg' },
|
|
355
355
|
{ 'id': 'q26', 'start': 160600001, 'end': 164100000, 'type': 'gpos50' },
|
|
356
|
-
{ 'id': 'q27', 'start': 164100001, 'end': 170805979, 'type': 'gneg' }
|
|
357
|
-
]
|
|
356
|
+
{ 'id': 'q27', 'start': 164100001, 'end': 170805979, 'type': 'gneg' },
|
|
357
|
+
],
|
|
358
358
|
},
|
|
359
359
|
'7': {
|
|
360
360
|
'size' : 159345973,
|
|
@@ -402,8 +402,8 @@ Genoverse.Genomes.grch38 = {
|
|
|
402
402
|
{ 'id': 'q35', 'start': 143400001, 'end': 148200000, 'type': 'gpos75' },
|
|
403
403
|
{ 'id': 'q36.1', 'start': 148200001, 'end': 152800000, 'type': 'gneg' },
|
|
404
404
|
{ 'id': 'q36.2', 'start': 152800001, 'end': 155200000, 'type': 'gpos25' },
|
|
405
|
-
{ 'id': 'q36.3', 'start': 155200001, 'end': 159345973, 'type': 'gneg' }
|
|
406
|
-
]
|
|
405
|
+
{ 'id': 'q36.3', 'start': 155200001, 'end': 159345973, 'type': 'gneg' },
|
|
406
|
+
],
|
|
407
407
|
},
|
|
408
408
|
'8': {
|
|
409
409
|
'size' : 145138636,
|
|
@@ -447,8 +447,8 @@ Genoverse.Genomes.grch38 = {
|
|
|
447
447
|
{ 'id': 'q24.21', 'start': 126300001, 'end': 130400000, 'type': 'gpos50' },
|
|
448
448
|
{ 'id': 'q24.22', 'start': 130400001, 'end': 135400000, 'type': 'gneg' },
|
|
449
449
|
{ 'id': 'q24.23', 'start': 135400001, 'end': 138900000, 'type': 'gpos75' },
|
|
450
|
-
{ 'id': 'q24.3', 'start': 138900001, 'end': 145138636, 'type': 'gneg' }
|
|
451
|
-
]
|
|
450
|
+
{ 'id': 'q24.3', 'start': 138900001, 'end': 145138636, 'type': 'gneg' },
|
|
451
|
+
],
|
|
452
452
|
},
|
|
453
453
|
'9': {
|
|
454
454
|
'size' : 138394717,
|
|
@@ -495,8 +495,8 @@ Genoverse.Genomes.grch38 = {
|
|
|
495
495
|
{ 'id': 'q34.12', 'start': 130600001, 'end': 131100000, 'type': 'gpos25' },
|
|
496
496
|
{ 'id': 'q34.13', 'start': 131100001, 'end': 133100000, 'type': 'gneg' },
|
|
497
497
|
{ 'id': 'q34.2', 'start': 133100001, 'end': 134500000, 'type': 'gpos25' },
|
|
498
|
-
{ 'id': 'q34.3', 'start': 134500001, 'end': 138394717, 'type': 'gneg' }
|
|
499
|
-
]
|
|
498
|
+
{ 'id': 'q34.3', 'start': 134500001, 'end': 138394717, 'type': 'gneg' },
|
|
499
|
+
],
|
|
500
500
|
},
|
|
501
501
|
'10': {
|
|
502
502
|
'size' : 133797422,
|
|
@@ -542,8 +542,8 @@ Genoverse.Genomes.grch38 = {
|
|
|
542
542
|
{ 'id': 'q26.12', 'start': 119900001, 'end': 121400000, 'type': 'gpos50' },
|
|
543
543
|
{ 'id': 'q26.13', 'start': 121400001, 'end': 125700000, 'type': 'gneg' },
|
|
544
544
|
{ 'id': 'q26.2', 'start': 125700001, 'end': 128800000, 'type': 'gpos50' },
|
|
545
|
-
{ 'id': 'q26.3', 'start': 128800001, 'end': 133797422, 'type': 'gneg' }
|
|
546
|
-
]
|
|
545
|
+
{ 'id': 'q26.3', 'start': 128800001, 'end': 133797422, 'type': 'gneg' },
|
|
546
|
+
],
|
|
547
547
|
},
|
|
548
548
|
'11': {
|
|
549
549
|
'size' : 135086622,
|
|
@@ -583,8 +583,8 @@ Genoverse.Genomes.grch38 = {
|
|
|
583
583
|
{ 'id': 'q24.1', 'start': 121300001, 'end': 124000000, 'type': 'gpos50' },
|
|
584
584
|
{ 'id': 'q24.2', 'start': 124000001, 'end': 127900000, 'type': 'gneg' },
|
|
585
585
|
{ 'id': 'q24.3', 'start': 127900001, 'end': 130900000, 'type': 'gpos50' },
|
|
586
|
-
{ 'id': 'q25', 'start': 130900001, 'end': 135086622, 'type': 'gneg' }
|
|
587
|
-
]
|
|
586
|
+
{ 'id': 'q25', 'start': 130900001, 'end': 135086622, 'type': 'gneg' },
|
|
587
|
+
],
|
|
588
588
|
},
|
|
589
589
|
'12': {
|
|
590
590
|
'size' : 133275309,
|
|
@@ -629,8 +629,8 @@ Genoverse.Genomes.grch38 = {
|
|
|
629
629
|
{ 'id': 'q24.23', 'start': 117700001, 'end': 120300000, 'type': 'gpos50' },
|
|
630
630
|
{ 'id': 'q24.31', 'start': 120300001, 'end': 125400000, 'type': 'gneg' },
|
|
631
631
|
{ 'id': 'q24.32', 'start': 125400001, 'end': 128700000, 'type': 'gpos50' },
|
|
632
|
-
{ 'id': 'q24.33', 'start': 128700001, 'end': 133275309, 'type': 'gneg' }
|
|
633
|
-
]
|
|
632
|
+
{ 'id': 'q24.33', 'start': 128700001, 'end': 133275309, 'type': 'gneg' },
|
|
633
|
+
],
|
|
634
634
|
},
|
|
635
635
|
'13': {
|
|
636
636
|
'size' : 114364328,
|
|
@@ -670,8 +670,8 @@ Genoverse.Genomes.grch38 = {
|
|
|
670
670
|
{ 'id': 'q33.1', 'start': 101100001, 'end': 104200000, 'type': 'gpos100' },
|
|
671
671
|
{ 'id': 'q33.2', 'start': 104200001, 'end': 106400000, 'type': 'gneg' },
|
|
672
672
|
{ 'id': 'q33.3', 'start': 106400001, 'end': 109600000, 'type': 'gpos100' },
|
|
673
|
-
{ 'id': 'q34', 'start': 109600001, 'end': 114364328, 'type': 'gneg' }
|
|
674
|
-
]
|
|
673
|
+
{ 'id': 'q34', 'start': 109600001, 'end': 114364328, 'type': 'gneg' },
|
|
674
|
+
],
|
|
675
675
|
},
|
|
676
676
|
'14': {
|
|
677
677
|
'size' : 107043718,
|
|
@@ -707,8 +707,8 @@ Genoverse.Genomes.grch38 = {
|
|
|
707
707
|
{ 'id': 'q32.2', 'start': 95800001, 'end': 100900000, 'type': 'gpos50' },
|
|
708
708
|
{ 'id': 'q32.31', 'start': 100900001, 'end': 102700000, 'type': 'gneg' },
|
|
709
709
|
{ 'id': 'q32.32', 'start': 102700001, 'end': 103500000, 'type': 'gpos50' },
|
|
710
|
-
{ 'id': 'q32.33', 'start': 103500001, 'end': 107043718, 'type': 'gneg' }
|
|
711
|
-
]
|
|
710
|
+
{ 'id': 'q32.33', 'start': 103500001, 'end': 107043718, 'type': 'gneg' },
|
|
711
|
+
],
|
|
712
712
|
},
|
|
713
713
|
'15': {
|
|
714
714
|
'size' : 101991189,
|
|
@@ -744,8 +744,8 @@ Genoverse.Genomes.grch38 = {
|
|
|
744
744
|
{ 'id': 'q25.3', 'start': 84700001, 'end': 88500000, 'type': 'gpos50' },
|
|
745
745
|
{ 'id': 'q26.1', 'start': 88500001, 'end': 93800000, 'type': 'gneg' },
|
|
746
746
|
{ 'id': 'q26.2', 'start': 93800001, 'end': 98000000, 'type': 'gpos50' },
|
|
747
|
-
{ 'id': 'q26.3', 'start': 98000001, 'end': 101991189, 'type': 'gneg' }
|
|
748
|
-
]
|
|
747
|
+
{ 'id': 'q26.3', 'start': 98000001, 'end': 101991189, 'type': 'gneg' },
|
|
748
|
+
],
|
|
749
749
|
},
|
|
750
750
|
'16': {
|
|
751
751
|
'size' : 90338345,
|
|
@@ -774,8 +774,8 @@ Genoverse.Genomes.grch38 = {
|
|
|
774
774
|
{ 'id': 'q23.3', 'start': 81600001, 'end': 84100000, 'type': 'gpos50' },
|
|
775
775
|
{ 'id': 'q24.1', 'start': 84100001, 'end': 87000000, 'type': 'gneg' },
|
|
776
776
|
{ 'id': 'q24.2', 'start': 87000001, 'end': 88700000, 'type': 'gpos25' },
|
|
777
|
-
{ 'id': 'q24.3', 'start': 88700001, 'end': 90338345, 'type': 'gneg' }
|
|
778
|
-
]
|
|
777
|
+
{ 'id': 'q24.3', 'start': 88700001, 'end': 90338345, 'type': 'gneg' },
|
|
778
|
+
],
|
|
779
779
|
},
|
|
780
780
|
'17': {
|
|
781
781
|
'size' : 83257441,
|
|
@@ -803,8 +803,8 @@ Genoverse.Genomes.grch38 = {
|
|
|
803
803
|
{ 'id': 'q24.3', 'start': 69100001, 'end': 72900000, 'type': 'gpos75' },
|
|
804
804
|
{ 'id': 'q25.1', 'start': 72900001, 'end': 76800000, 'type': 'gneg' },
|
|
805
805
|
{ 'id': 'q25.2', 'start': 76800001, 'end': 77200000, 'type': 'gpos25' },
|
|
806
|
-
{ 'id': 'q25.3', 'start': 77200001, 'end': 83257441, 'type': 'gneg' }
|
|
807
|
-
]
|
|
806
|
+
{ 'id': 'q25.3', 'start': 77200001, 'end': 83257441, 'type': 'gneg' },
|
|
807
|
+
],
|
|
808
808
|
},
|
|
809
809
|
'18': {
|
|
810
810
|
'size' : 80373285,
|
|
@@ -828,8 +828,8 @@ Genoverse.Genomes.grch38 = {
|
|
|
828
828
|
{ 'id': 'q22.1', 'start': 63900001, 'end': 69100000, 'type': 'gpos100' },
|
|
829
829
|
{ 'id': 'q22.2', 'start': 69100001, 'end': 71000000, 'type': 'gneg' },
|
|
830
830
|
{ 'id': 'q22.3', 'start': 71000001, 'end': 75400000, 'type': 'gpos25' },
|
|
831
|
-
{ 'id': 'q23', 'start': 75400001, 'end': 80373285, 'type': 'gneg' }
|
|
832
|
-
]
|
|
831
|
+
{ 'id': 'q23', 'start': 75400001, 'end': 80373285, 'type': 'gneg' },
|
|
832
|
+
],
|
|
833
833
|
},
|
|
834
834
|
'19': {
|
|
835
835
|
'size' : 58617616,
|
|
@@ -852,8 +852,8 @@ Genoverse.Genomes.grch38 = {
|
|
|
852
852
|
{ 'id': 'q13.33', 'start': 47500001, 'end': 50900000, 'type': 'gneg' },
|
|
853
853
|
{ 'id': 'q13.41', 'start': 50900001, 'end': 53100000, 'type': 'gpos25' },
|
|
854
854
|
{ 'id': 'q13.42', 'start': 53100001, 'end': 55800000, 'type': 'gneg' },
|
|
855
|
-
{ 'id': 'q13.43', 'start': 55800001, 'end': 58617616, 'type': 'gpos25' }
|
|
856
|
-
]
|
|
855
|
+
{ 'id': 'q13.43', 'start': 55800001, 'end': 58617616, 'type': 'gpos25' },
|
|
856
|
+
],
|
|
857
857
|
},
|
|
858
858
|
'20': {
|
|
859
859
|
'size' : 64444167,
|
|
@@ -877,8 +877,8 @@ Genoverse.Genomes.grch38 = {
|
|
|
877
877
|
{ 'id': 'q13.2', 'start': 51200001, 'end': 56400000, 'type': 'gpos75' },
|
|
878
878
|
{ 'id': 'q13.31', 'start': 56400001, 'end': 57800000, 'type': 'gneg' },
|
|
879
879
|
{ 'id': 'q13.32', 'start': 57800001, 'end': 59700000, 'type': 'gpos50' },
|
|
880
|
-
{ 'id': 'q13.33', 'start': 59700001, 'end': 64444167, 'type': 'gneg' }
|
|
881
|
-
]
|
|
880
|
+
{ 'id': 'q13.33', 'start': 59700001, 'end': 64444167, 'type': 'gneg' },
|
|
881
|
+
],
|
|
882
882
|
},
|
|
883
883
|
'21': {
|
|
884
884
|
'size' : 46709983,
|
|
@@ -896,8 +896,8 @@ Genoverse.Genomes.grch38 = {
|
|
|
896
896
|
{ 'id': 'q22.12', 'start': 34400001, 'end': 36400000, 'type': 'gpos50' },
|
|
897
897
|
{ 'id': 'q22.13', 'start': 36400001, 'end': 38300000, 'type': 'gneg' },
|
|
898
898
|
{ 'id': 'q22.2', 'start': 38300001, 'end': 41200000, 'type': 'gpos50' },
|
|
899
|
-
{ 'id': 'q22.3', 'start': 41200001, 'end': 46709983, 'type': 'gneg' }
|
|
900
|
-
]
|
|
899
|
+
{ 'id': 'q22.3', 'start': 41200001, 'end': 46709983, 'type': 'gneg' },
|
|
900
|
+
],
|
|
901
901
|
},
|
|
902
902
|
'22': {
|
|
903
903
|
'size' : 50818468,
|
|
@@ -917,8 +917,8 @@ Genoverse.Genomes.grch38 = {
|
|
|
917
917
|
{ 'id': 'q13.2', 'start': 40600001, 'end': 43800000, 'type': 'gpos50' },
|
|
918
918
|
{ 'id': 'q13.31', 'start': 43800001, 'end': 48100000, 'type': 'gneg' },
|
|
919
919
|
{ 'id': 'q13.32', 'start': 48100001, 'end': 49100000, 'type': 'gpos50' },
|
|
920
|
-
{ 'id': 'q13.33', 'start': 49100001, 'end': 50818468, 'type': 'gneg' }
|
|
921
|
-
]
|
|
920
|
+
{ 'id': 'q13.33', 'start': 49100001, 'end': 50818468, 'type': 'gneg' },
|
|
921
|
+
],
|
|
922
922
|
},
|
|
923
923
|
'X': {
|
|
924
924
|
'size' : 156040895,
|
|
@@ -962,8 +962,8 @@ Genoverse.Genomes.grch38 = {
|
|
|
962
962
|
{ 'id': 'q27.1', 'start': 138900001, 'end': 141200000, 'type': 'gpos75' },
|
|
963
963
|
{ 'id': 'q27.2', 'start': 141200001, 'end': 143000000, 'type': 'gneg' },
|
|
964
964
|
{ 'id': 'q27.3', 'start': 143000001, 'end': 148000000, 'type': 'gpos100' },
|
|
965
|
-
{ 'id': 'q28', 'start': 148000001, 'end': 156040895, 'type': 'gneg' }
|
|
966
|
-
]
|
|
965
|
+
{ 'id': 'q28', 'start': 148000001, 'end': 156040895, 'type': 'gneg' },
|
|
966
|
+
],
|
|
967
967
|
},
|
|
968
968
|
'Y': {
|
|
969
969
|
'size' : 57227415,
|
|
@@ -978,13 +978,13 @@ Genoverse.Genomes.grch38 = {
|
|
|
978
978
|
{ 'id': 'q11.222', 'start': 17100001, 'end': 19600000, 'type': 'gneg' },
|
|
979
979
|
{ 'id': 'q11.223', 'start': 19600001, 'end': 23800000, 'type': 'gpos50' },
|
|
980
980
|
{ 'id': 'q11.23', 'start': 23800001, 'end': 26600000, 'type': 'gneg' },
|
|
981
|
-
{ 'id': 'q12', 'start': 26600001, 'end': 57227415, 'type': 'gvar' }
|
|
982
|
-
]
|
|
981
|
+
{ 'id': 'q12', 'start': 26600001, 'end': 57227415, 'type': 'gvar' },
|
|
982
|
+
],
|
|
983
983
|
},
|
|
984
984
|
'MT': {
|
|
985
985
|
'size' : 16569,
|
|
986
986
|
'bands' : [
|
|
987
|
-
{ 'start': 1, 'end': 16569 }
|
|
988
|
-
]
|
|
989
|
-
}
|
|
987
|
+
{ 'start': 1, 'end': 16569 },
|
|
988
|
+
],
|
|
989
|
+
},
|
|
990
990
|
};
|